Selection-free zinc-finger-nuclease engineering by context-dependent assembly (CoDA)

Nature Methods

Volumn 8, Issue 1, 2011, Pages 67-69

  Sander, Jeffry D ^a,b   Dahlborg, Elizabeth J ^a   Goodwin, Mathew J ^a   Cade, Lindsay ^a   Zhang, Feng ^c   Cifuentes, Daniel ^d   Curtin, Shaun J ^e   Blackburn, Jessica S ^a,b   Thibodeau Beganny, Stacey ^a   Qi, Yiping ^c   Pierick, Christopher J ^c   Hoffman, Ellen ^d   Maeder, Morgan L ^a,b   Khayter, Cyd ^a   Reyon, Deepak ^f   Dobbs, Drena ^f   Langenau, David M ^a,b   Stupar, Robert M ^e   Giraldez, Antonio J ^d   Voytas, Daniel F ^c   Peterson, Randall T ^a,b,g   Yeh, Jing Ruey J ^a,b   Joung, J Keith ^a,b   more..

^a MASSACHUSETTS GENERAL HOSPITAL   (United States)

^b HARVARD MEDICAL SCHOOL   (United States)

^c UNIVERSITY OF MINNESOTA MEDICAL SCHOOL   (United States)

^d YALE UNIVERSITY SCHOOL OF MEDICINE   (United States)

^e UNIVERSITY OF MINNESOTA   (United States)

^f IOWA STATE UNIVERSITY   (United States)

^g BROAD INSTITUTE OF MIT AND HARVARD   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; FREE ZINC FINGER NUCLEASE; NUCLEASE; UNCLASSIFIED DRUG;

ACTN1 GENE; AGO1 GENE; APOEB GENE; ARABIDOPSIS; ARTICLE; BMPR2A GENE; CLONING; CNOT1 GENE; CONTEXT DEPENDENT ASSEMBLY; CTCF GENE; DCL4A GENE; DCL4B GENE; DICER1 GENE; DNA SYNTHESIS; DROSHA GENE; ENZYME ENGINEERING; G6PCB GENE; GA3OX2 GENE; GAD2 GENE; GENE; GRIP1 GENE; JAK3 GENE; LMNA GENE; MAPKKK1 GENE; MAPKKK12 GENE; MAPKKK18 GENE; MAPKKK4 GENE; MKK9 GENE; MPK11 GENE; MPK15 GENE; MPK4 GENE; MPK8 GENE; NEDD4L GENE; NOD2 GENE; NONHUMAN; PCLO GENE; PRIORITY JOURNAL; RAG1 GENE; RAG2 GENE; SLITRK1 GENE; SOYBEAN; TH2 GENE; TP53 GENE; TRPM7 GENE; TZP GENE; ZEBRA FISH;

ANIMALS; ARABIDOPSIS; DNA-BINDING PROTEINS; ENDONUCLEASES; GENOME; PROTEIN ENGINEERING; SOYBEANS; ZEBRAFISH; ZINC FINGERS;

ARABIDOPSIS THALIANA; DANIO RERIO; GLYCINE MAX;

EID: 78650863981     PISSN: 15487091     EISSN: 15491676     Source Type: Journal    
DOI: 10.1038/nmeth.1542     Document Type: Article

References (20)

1. Carroll, D. Gene Ther. 15, 1463-1468 (2008).
2. Cathomen, T. & Joung, J.K. Mol. Ther. 16, 1200-1207 (2008).
3. Kim, J.S., Lee, H.J. & Carroll, D. Nat. Methods 7, 91 (author reply, 91-92) (2010).
4. Ramirez, C.L. et al. Nat. Methods 5, 374-375 (2008).
5. Kim, H.J., Lee, H.J., Kim, H., Cho, S.W. & Kim, J.S. Genome Res. 19, 1279-1288 (2009).
6. Lee, H.J., Kim, E. & Kim, J.S. Genome Res. 20, 81-89 (2010).
7. Maeder, M.L. et al. Mol. Cell 31, 294-301 (2008).
8. Doyon, Y. et al. Nat. Biotechnol. 26, 702-708 (2008).
9. Pearson, H. Nature 455, 160-164 (2008).
10. Isalan, M., Choo, Y. & Klug, A. Proc. Natl. Acad. Sci. USA 94, 5617-5621 (1997).
11. Isalan, M., Klug, A. & Choo, Y. Biochemistry 37, 12026-12033 (1998).
12. Foley, J.E. et al. PLoS ONE 4, e4348 (2009).
13. Zou, J. et al. Cell Stem Cell 5, 97-110 (2009).
14. Zhang, F. et al. Proc. Natl. Acad. Sci. USA 107, 12028-12033 (2010).
15. Townsend, J.A. et al. Nature 459, 442-445 (2009).
16. Maeder, M.L., Thibodeau-Beganny, S., Sander, J.D., Voytas, D.F. & Joung, J.K. Nat. Protoc. 4, 1471-1501 (2009).
17. Wright, D.A. et al. Nat. Protoc. 1, 1637-1652 (2006).
18. Foley, J.E. et al. Nat. Protoc. 4, 1855-1867 (2009).
19. Govindarajulu, M., Elmore, J.M., Fester, T. & Taylor, C.G. Mol. Plant Microbe Interact. 21, 1027-1035 (2008).
20. Tamura, K., Dudley, J., Nei, M. & Kumar, S. Mol. Biol. Evol. 24, 1596-1599 (2007).