-
1
-
-
0031045876
-
Retinopathy induced in mice by targeted disruption of the rhodopsin gene
-
DOI 10.1038/ng0297-216
-
Humphries MM, et al. Retinopathy induced in mice by targeted disruption of the rhodopsin gene [see comments]. Nat Genet. 1997;15:216-9. (Pubitemid 27061648)
-
(1997)
Nature Genetics
, vol.15
, Issue.2
, pp. 216-219
-
-
Humphries, M.M.1
Rancourt, D.2
Farrar, G.J.3
Kenna, P.4
Hazel, M.5
Bush, R.A.6
Sieving, P.A.7
Sheils, D.M.8
McNally, N.9
Creighton, P.10
Erven, A.11
Boros, A.12
Gulya, K.13
Capecchi, M.R.14
Humphries, P.15
-
2
-
-
0026463972
-
Transgenic mice with a rhodopsin mutation (Pro23His): A mouse model of autosomal dominant retinitis pigmentosa
-
Olsson JE, et al. Transgenic mice with a rhodopsin mutation (Pro23His): a mouse model of autosomal dominant retinitis pigmentosa. Neuron. 1992;9:815-30.
-
(1992)
Neuron.
, vol.9
, pp. 815-830
-
-
Olsson, J.E.1
-
3
-
-
79955938116
-
Early gene expression changes in the retinal ganglion cell layer of a rat glaucoma model
-
Guo Y, et al. Early gene expression changes in the retinal ganglion cell layer of a rat glaucoma model. Investig Ophthalmol Vis Sci. 2011;52:1460-73.
-
(2011)
Investig Ophthalmol Vis Sci.
, vol.52
, pp. 1460-1473
-
-
Guo, Y.1
-
4
-
-
77955864124
-
Global gene expression changes in rat retinal ganglion cells in experimental glaucoma
-
Wang DY, et al. Global gene expression changes in rat retinal ganglion cells in experimental glaucoma. Investig Ophthalmol Vis Sci. 2010;51:4084-95.
-
(2010)
Investig Ophthalmol Vis Sci.
, vol.51
, pp. 4084-4095
-
-
Wang, D.Y.1
-
5
-
-
77951248779
-
Gene expression changes in areas of focal loss of retinal ganglion cells in the retina of DBA/2J mice
-
Panagis L, et al. Gene expression changes in areas of focal loss of retinal ganglion cells in the retina of DBA/2J mice. Investig Ophthalmol Vis Sci. 2010;51:2024-34.
-
(2010)
Investig Ophthalmol Vis Sci.
, vol.51
, pp. 2024-2034
-
-
Panagis, L.1
-
6
-
-
38849100921
-
Regulation of photoreceptor gene expression by Crx-associated transcription factor network
-
DOI 10.1016/j.brainres.2007.06.036, PII S0006899307014382
-
Hennig AK, Peng GH, Chen S. Regulation of photoreceptor gene expression by Crx-associated transcription factor network. Brain Res. 2008;1192:114-33. (Pubitemid 351199487)
-
(2008)
Brain Research
, vol.1192
, Issue.C
, pp. 114-133
-
-
Hennig, A.K.1
Peng, G.-H.2
Chen, S.3
-
7
-
-
77954879972
-
Transcriptional regulation of photoreceptor development and homeostasis in the mammalian retina
-
Swaroop A, Kim D, Forrest D. Transcriptional regulation of photoreceptor development and homeostasis in the mammalian retina. Nat Rev Neurosci. 2010;11:563-76.
-
(2010)
Nat Rev Neurosci.
, vol.11
, pp. 563-576
-
-
Swaroop, A.1
Kim, D.2
Forrest, D.3
-
8
-
-
38849193368
-
Regulation of retinal cell fate specification by multiple transcription factors
-
DOI 10.1016/j.brainres.2007.04.014, PII S0006899307008141
-
Ohsawa R,Kageyama R. Regulation of retinal cell fate specification by multiple transcription factors. Brain research. 2008;1192: 90-8. (Pubitemid 351199481)
-
(2008)
Brain Research
, vol.1192
, Issue.C
, pp. 90-98
-
-
Ohsawa, R.1
Kageyama, R.2
-
9
-
-
78650304236
-
Charting histone modifications and the functional organization of mammalian genomes
-
Zhou VW, Goren A, Bernstein BE. Charting histone modifications and the functional organization of mammalian genomes. Nat Rev Genet. 2011;12:7-18.
-
(2011)
Nat Rev Genet.
, vol.12
, pp. 7-18
-
-
Zhou, V.W.1
Goren, A.2
Bernstein, B.E.3
-
11
-
-
80055071058
-
Active opsin loci adopt intrachromosomal loops that depend on the photoreceptor transcription factor network
-
Peng GH, Chen S. Active opsin loci adopt intrachromosomal loops that depend on the photoreceptor transcription factor network. Proc Natl Acad Sci U S A. 2011;108:17821-6.
-
(2011)
Proc Natl Acad Sci U S A.
, vol.108
, pp. 17821-17826
-
-
Peng, G.H.1
Chen, S.2
-
12
-
-
0026806222
-
A locus control region adjacent to the human red and green visual pigment genes
-
Wang Y, et al. A locus control region adjacent to the human red and green visual pigment genes. Neuron. 1992;9:429-40.
-
(1992)
Neuron.
, vol.9
, pp. 429-440
-
-
Wang, Y.1
-
13
-
-
0033609084
-
Mutually exclusive expression of human red and green visual pigment- reporter transgenes occurs at high frequency in murine cone photoreceptors
-
DOI 10.1073/pnas.96.9.5251
-
Wang Y, et al. Mutually exclusive expression of human red and green visual pigment-reporter transgenes occurs at high frequency in murine cone photoreceptors. Proc Natl Acad Sci U S A. 1999;96:5251-6. (Pubitemid 29214569)
-
(1999)
Proceedings of the National Academy of Sciences of the United States of America
, vol.96
, Issue.9
, pp. 5251-5256
-
-
Wang, Y.1
Smallwood, P.M.2
Cowan, M.3
Blesh, D.4
Lawler, A.5
Nathans, J.6
-
14
-
-
23444435711
-
Developmental regulation of the beta-globin gene locus
-
Chakalova L, et al. Developmental regulation of the beta-globin gene locus. Prog Mol Subcell Biol. 2005;38:183-206.
-
(2005)
Prog Mol Subcell Biol.
, vol.38
, pp. 183-206
-
-
Chakalova, L.1
-
15
-
-
33744921070
-
Trimethylation of histone H3 lysine 4 by Set1 in the lytic infection of human herpes simplex virus 1
-
DOI 10.1128/JVI.00169-06
-
Huang J, et al. Trimethylation of histone H3 lysine 4 by Set1 in the lytic infection of human herpes simplex virus 1. J Virol. 2006;80:5740-6. (Pubitemid 43849152)
-
(2006)
Journal of Virology
, vol.80
, Issue.12
, pp. 5740-5746
-
-
Huang, J.1
Kent, J.R.2
Placek, B.3
Whelan, K.A.4
Hollow, C.M.5
Zeng, P.-Y.6
Fraser, N.W.7
Berger, S.L.8
-
16
-
-
79955948708
-
Dynamic patterns of histone lysine methylation in the developing retina
-
Rao RC, et al. Dynamic patterns of histone lysine methylation in the developing retina. Invest Ophthalmol Vis Sci. 2010;51:6784-92.
-
(2010)
Invest Ophthalmol Vis Sci.
, vol.51
, pp. 6784-6792
-
-
Rao, R.C.1
-
17
-
-
11144332565
-
Histone demethylation mediated by the nuclear amine oxidase homolog LSD1
-
DOI 10.1016/j.cell.2004.12.012, PII S0092867404011997
-
Shi Y, et al. Histone demethylation mediated by the nuclear amine oxidase homolog LSD1. Cell. 2004;119:941-53. (Pubitemid 40037608)
-
(2004)
Cell
, vol.119
, Issue.7
, pp. 941-953
-
-
Shi, Y.1
Lan, F.2
Matson, C.3
Mulligan, P.4
Whetstine, J.R.5
Cole, P.A.6
Casero, R.A.7
Shi, Y.8
-
18
-
-
6944230814
-
Highly specific interactions between bHLH transcription factors and chromatin during retina development
-
DOI 10.1242/dev.01302
-
Skowronska-Krawczyk D, Ballivet M, Dynlacht BD, Matter JM. Highly specific interactions between bHLH transcription factors and chromatin during retina development. Development. 2004;131:4447-54. (Pubitemid 39409686)
-
(2004)
Development
, vol.131
, Issue.18
, pp. 4447-4454
-
-
Skowronska-Krawczyk, D.1
Ballivet, M.2
Dynlacht, B.D.3
Matter, J.-M.4
-
19
-
-
0037099413
-
G9a histone methyltransferase plays a dominant role in euchromatic histone H3 lysine 9 methylation and is essential for early embryogenesis
-
DOI 10.1101/gad.989402
-
Tachibana M, et al. G9a histone methyltransferase plays a dominant role in euchromatic histone H3 lysine 9 methylation and is essential for early embryogenesis. Genes Dev. 2002;16:1779-91. (Pubitemid 34803894)
-
(2002)
Genes and Development
, vol.16
, Issue.14
, pp. 1779-1791
-
-
Tachibana, M.1
Sugimoto, K.2
Nozaki, M.3
Ueda, J.4
Ohta, T.5
Ohki, M.6
Fukuda, M.7
Takeda, N.8
Niida, H.9
Kato, H.10
Shinkai, Y.11
-
20
-
-
70349464819
-
P21(WAF1) gene promoter is epigenetically silenced by CTIP2 and SUV39H1
-
Cherrier T, et al. p21(WAF1) gene promoter is epigenetically silenced by CTIP2 and SUV39H1. Oncogene. 2009;28:3380-9.
-
(2009)
Oncogene.
, vol.28
, pp. 3380-3389
-
-
Cherrier, T.1
-
21
-
-
68949148757
-
Histone methyltransferase PRDM8 regulates mouse testis steroidogenesis
-
Eom GH, et al. Histone methyltransferase PRDM8 regulates mouse testis steroidogenesis. Biochem Biophys Res Commun. 2009;388:131-6.
-
(2009)
Biochem Biophys Res Commun.
, vol.388
, pp. 131-136
-
-
Eom, G.H.1
-
22
-
-
70149113926
-
Expression of the mouse PR domain protein Prdm8 in the developing central nervous system
-
Komai T, Iwanari H, Mochizuki Y, Hamakubo T, Shinkai Y. Expression of the mouse PR domain protein Prdm8 in the developing central nervous system. Gene Expr Patterns. 2009;9:503-14.
-
(2009)
Gene Expr Patterns.
, vol.9
, pp. 503-514
-
-
Komai, T.1
Iwanari, H.2
Mochizuki, Y.3
Hamakubo, T.4
Shinkai, Y.5
-
23
-
-
33846783261
-
Reversal of H3K9me2 by a Small-Molecule Inhibitor for the G9a Histone Methyltransferase
-
DOI 10.1016/j.molcel.2007.01.017, PII S1097276507000408
-
Kubicek S, et al. Reversal of H3K9me2 by a small-molecule inhibitor for the G9a histone methyltransferase. Mol Cell. 2007;25:473-81. (Pubitemid 46206139)
-
(2007)
Molecular Cell
, vol.25
, Issue.3
, pp. 473-481
-
-
Kubicek, S.1
O'Sullivan, R.J.2
August, E.M.3
Hickey, E.R.4
Zhang, Q.5
Teodoro, MiguelL.6
Rea, S.7
Mechtler, K.8
Kowalski, J.A.9
Homon, C.A.10
Kelly, T.A.11
Jenuwein, T.12
-
24
-
-
30644474460
-
Identification of a specific inhibitor of the histone methyltransferase SU (VAR)3-9
-
Greiner D, Bonaldi T, Eskeland R, Roemer E, Imhof A. Identification of a specific inhibitor of the histone methyltransferase SU (VAR)3-9. Nat Chem Biol. 2005;1:143-5.
-
(2005)
Nat Chem Biol.
, vol.1
, pp. 143-145
-
-
Greiner, D.1
Bonaldi, T.2
Eskeland, R.3
Roemer, E.4
Imhof, A.5
-
25
-
-
77957673318
-
Epigenetic analysis of KSHV latent and lytic genomes
-
Toth Z, et al. Epigenetic analysis of KSHV latent and lytic genomes. PLoS pathogens. 2010;6:e1001013.
-
(2010)
PLoS Pathogens.
, vol.6
-
-
Toth, Z.1
-
26
-
-
34247625135
-
Pharmacologic disruption of polycomb-repressive complex 2-mediated gene repression selectively induces apoptosis in cancer cells
-
DOI 10.1101/gad.1524107
-
Tan J, et al. Pharmacologic disruption of Polycomb-repressive complex 2-mediated gene repression selectively induces apoptosis in cancer cells. Genes Dev. 2007;21:1050-63. (Pubitemid 46686474)
-
(2007)
Genes and Development
, vol.21
, Issue.9
, pp. 1050-1063
-
-
Tan, J.1
Yang, X.2
Zhuang, L.3
Jiang, X.4
Chen, W.5
Puay, L.L.6
Karuturi, R.K.M.7
Tan, P.B.O.8
Liu, E.T.9
Yu, Q.10
-
27
-
-
34547842515
-
Dynamics of Dnmt1 interaction with the replication machinery and its role in postreplicative maintenance of DNA methylation
-
DOI 10.1093/nar/gkm432
-
Schermelleh L, et al. Dynamics of Dnmt1 interaction with the replication machinery and its role in postreplicative maintenance of DNA methylation. Nucleic Acids Res. 2007;35:4301-12. (Pubitemid 47244584)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.13
, pp. 4301-4312
-
-
Schermelleh, L.1
Haemmer, A.2
Spada, F.3
Rosing, N.4
Meilinger, D.5
Rothbauer, U.6
Cardoso, C.M.7
Leonhardt, H.8
-
28
-
-
79956264664
-
Distinct nuclear localization patterns of DNA methyltransferases in developing and mature mammalian retina
-
Nasonkin IO, et al. Distinct nuclear localization patterns of DNA methyltransferases in developing and mature mammalian retina. J Comp Neurol. 2011;519:1914-30.
-
(2011)
J Comp Neurol.
, vol.519
, pp. 1914-1930
-
-
Nasonkin, I.O.1
-
29
-
-
84863982182
-
Role of epigenetics (DNA Methylation) in RPE and photoreceptor development
-
Nasonkin IO, et al. (2010) Role of Epigenetics (DNA Methylation) in RPE and Photoreceptor Development. in Invest Ophthalmol Vis Sci (Annual Meeting Abstracts), pp E-Abstract 4304.
-
(2010)
Invest Ophthalmol Vis Sci (Annual Meeting Abstracts)
, pp. 4304
-
-
Nasonkin, I.O.1
-
31
-
-
0033615717
-
DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development
-
DOI 10.1016/S0092-8674(00)81656-6
-
Okano M, Bell DW, Haber DA, Li E. DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development. Cell. 1999;99:247-57. (Pubitemid 29519904)
-
(1999)
Cell
, vol.99
, Issue.3
, pp. 247-257
-
-
Okano, M.1
Bell, D.W.2
Haber, D.A.3
Li, E.4
-
32
-
-
77449109789
-
Target gene context influences the transcriptional requirement for the KAT3 family of CBP and p300 histone acetyltransferases
-
Bedford DC, Kasper LH, Fukuyama T, Brindle PK. Target gene context influences the transcriptional requirement for the KAT3 family of CBP and p300 histone acetyltransferases. Epigenetics. 2010;5:9-15.
-
(2010)
Epigenetics.
, vol.5
, pp. 9-15
-
-
Bedford, D.C.1
Kasper, L.H.2
Fukuyama, T.3
Brindle, P.K.4
-
33
-
-
65549113750
-
CBP/p300-mediated acetylation of histone H3 on lysine 56
-
Das C, Lucia MS, Hansen KC, Tyler JK. CBP/p300-mediated acetylation of histone H3 on lysine 56. Nature. 2009;459:113-7.
-
(2009)
Nature.
, vol.459
, pp. 113-117
-
-
Das, C.1
Lucia, M.S.2
Hansen, K.C.3
Tyler, J.K.4
-
34
-
-
0142091423
-
Quantitative analysis of CBP- and P300-induced histone acetylations in vivo using native chromatin
-
DOI 10.1128/MCB.23.21.7611-7627.2003
-
McManus KJ, Hendzel MJ. Quantitative analysis of CBP-and P300-induced histone acetylations in vivo using native chromatin. Mol Cell Biol. 2003;23:7611-27. (Pubitemid 37271460)
-
(2003)
Molecular and Cellular Biology
, vol.23
, Issue.21
, pp. 7611-7627
-
-
McManus, K.J.1
Hendzel, M.J.2
-
35
-
-
78751611793
-
Distinct roles of GCN5/PCAF-mediated H3K9ac and CBP/p300-mediated H3K18/27ac in nuclear receptor transactivation
-
Jin Q, et al. Distinct roles of GCN5/PCAF-mediated H3K9ac and CBP/p300-mediated H3K18/27ac in nuclear receptor transactivation. EMBO J. 2011;30:249-62.
-
(2011)
EMBO J.
, vol.30
, pp. 249-262
-
-
Jin, Q.1
-
36
-
-
84864281471
-
The histone acetyltransferase p300 promotes intrinsic axonal regeneration
-
Gaub P, et al. The histone acetyltransferase p300 promotes intrinsic axonal regeneration. Brain. 2011;134:2134-48.
-
(2011)
Brain.
, vol.134
, pp. 2134-2148
-
-
Gaub, P.1
-
37
-
-
79960141848
-
Mammalian sirtuins and energy metabolism
-
Li X, Kazgan N. Mammalian sirtuins and energy metabolism. Int J Biol Sci. 2011;7:575-87.
-
(2011)
Int J Biol Sci.
, vol.7
, pp. 575-587
-
-
Li, X.1
Kazgan, N.2
-
38
-
-
0037406061
-
Class II histone deacetylases: Versatile regulators
-
DOI 10.1016/S0168-9525(03)00073-8
-
Verdin E, Dequiedt F, Kasler HG. Class II histone deacetylases: versatile regulators. Trends Genet. 2003;19:286-93. (Pubitemid 36507011)
-
(2003)
Trends in Genetics
, vol.19
, Issue.5
, pp. 286-293
-
-
Verdin, E.1
Dequiedt, F.2
Kasler, H.G.3
-
39
-
-
84863988773
-
Targeting epigenetic mechanisms for pain relief
-
Geranton SM (2011) Targeting epigenetic mechanisms for pain relief. Curr Opin Pharmacol.
-
(2011)
Curr Opin Pharmacol
-
-
Geranton, S.M.1
-
40
-
-
77952656234
-
Histone H4 deacetylation plays a critical role in early gene silencing during neuronal apoptosis
-
Pelzel HR, Schlamp CL, Nickells RW. Histone H4 deacetylation plays a critical role in early gene silencing during neuronal apoptosis. BMC Neurosci. 2010;11:62.
-
(2010)
BMC Neurosci.
, vol.11
, pp. 62
-
-
Pelzel, H.R.1
Schlamp, C.L.2
Nickells, R.W.3
-
41
-
-
34447298862
-
Requirement of histone deacetylase activity for the expression of critical photoreceptor genes
-
Chen B, Cepko CL. Requirement of histone deacetylase activity for the expression of critical photoreceptor genes. BMC Dev Biol. 2007;7:78.
-
(2007)
BMC Dev Biol.
, vol.7
, pp. 78
-
-
Chen, B.1
Cepko, C.L.2
-
42
-
-
15144342687
-
BAP1: A novel ubiquitin hydrolase which binds to the BRCA1 RING finger and enhances BRCA1-mediated cell growth suppression
-
Jensen DE, et al. BAP1: a novel ubiquitin hydrolase which binds to the BRCA1 RING finger and enhances BRCA1-mediated cell growth suppression. Oncogene. 1998;16:1097-112. (Pubitemid 28127509)
-
(1998)
Oncogene
, vol.16
, Issue.9
, pp. 1097-1112
-
-
Jensen, D.E.1
Proctor, M.2
Marquis, S.T.3
Gardner, H.P.4
Ha, S.I.5
Chodosh, L.A.6
Ishov, A.M.7
Tommerup, N.8
Vissing, H.9
Sekido, Y.10
Minna, J.11
Borodovsky, A.12
Schultz, D.C.13
Wilkinson, K.D.14
Maul, G.G.15
Barlev, N.16
Berger, S.L.17
Prendergast, G.C.18
Rauscher III, F.J.19
-
43
-
-
77952429798
-
Histone H2A deubiquitinase activity of the Polycomb repressive complex PR-DUB
-
Scheuermann JC, et al. Histone H2A deubiquitinase activity of the Polycomb repressive complex PR-DUB. Nature. 2010;465:243-7.
-
(2010)
Nature.
, vol.465
, pp. 243-247
-
-
Scheuermann, J.C.1
-
44
-
-
78649700287
-
Frequent mutation of BAP1 in metastasizing uveal melanomas
-
Harbour JW, et al. Frequent mutation of BAP1 in metastasizing uveal melanomas. Science. 2010;330:1410-3.
-
(2010)
Science.
, vol.330
, pp. 1410-1413
-
-
Harbour, J.W.1
-
45
-
-
80053434128
-
Germline BAP1 mutations and tumor susceptibility
-
Goldstein AM. Germline BAP1 mutations and tumor susceptibility. Nat Genet. 2011;43:925-6.
-
(2011)
Nat Genet.
, vol.43
, pp. 925-926
-
-
Goldstein, A.M.1
-
46
-
-
80052597874
-
The tightly controlled deubiquitination activity of the human SAGA complex differentially modifies distinct gene regulatory elements
-
Lang G, et al. The tightly controlled deubiquitination activity of the human SAGA complex differentially modifies distinct gene regulatory elements. Mol Cell Biol. 2011;31:3734-44.
-
(2011)
Mol Cell Biol.
, vol.31
, pp. 3734-3744
-
-
Lang, G.1
-
47
-
-
80052805267
-
Histone modification: Cause or cog?
-
Henikoff S, Shilatifard A. Histone modification: cause or cog? Trends Genet. 2011;27:389-96.
-
(2011)
Trends Genet.
, vol.27
, pp. 389-396
-
-
Henikoff, S.1
Shilatifard, A.2
-
48
-
-
29144531244
-
Variant histone H2A.Z is globally localized to the promoters of inactive yeast genes and regulates nucleosome positioning
-
Guillemette B, et al. Variant histone H2A.Z is globally localized to the promoters of inactive yeast genes and regulates nucleosome positioning. PLoS biology. 2005;3:e384.
-
(2005)
PLoS Biology.
, vol.3
-
-
Guillemette, B.1
-
49
-
-
33747500567
-
A genomic code for nucleosome positioning
-
DOI 10.1038/nature04979, PII NATURE04979
-
Segal E, et al. A genomic code for nucleosome positioning. Nature. 2006;442:772-8. (Pubitemid 44258903)
-
(2006)
Nature
, vol.442
, Issue.7104
, pp. 772-778
-
-
Segal, E.1
Fondufe-Mittendorf, Y.2
Chen, L.3
Thastrom, A.4
Field, Y.5
Moore, I.K.6
Wang, J.-P.Z.7
Widom, J.8
-
52
-
-
80053172782
-
The long noncoding RNA Six3OS acts in trans to regulate retinal development by modulating Six3 activity
-
Rapicavoli NA, Poth EM, Zhu H, Blackshaw S. The long noncoding RNA Six3OS acts in trans to regulate retinal development by modulating Six3 activity. Neural development. 2011;6:32.
-
(2011)
Neural Development.
, vol.6
, pp. 32
-
-
Rapicavoli, N.A.1
Poth, E.M.2
Zhu, H.3
Blackshaw, S.4
-
53
-
-
77951945884
-
The long noncoding RNA RNCR2 directs mouse retinal cell specification
-
Rapicavoli NA, Poth EM, Blackshaw S. The long noncoding RNA RNCR2 directs mouse retinal cell specification. BMC Dev Biol. 2010;10:49.
-
(2010)
BMC Dev Biol.
, vol.10
, pp. 49
-
-
Rapicavoli, N.A.1
Poth, E.M.2
Blackshaw, S.3
-
54
-
-
77951118936
-
Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis
-
Gupta RA, et al. Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis. Nature. 2010;464: 1071-6.
-
(2010)
Nature.
, vol.464
, pp. 1071-1076
-
-
Gupta, R.A.1
-
55
-
-
78649339069
-
Long noncoding RNA in genome regulation: Prospects and mechanisms
-
Hung T, Chang HY. Long noncoding RNA in genome regulation: prospects and mechanisms. RNA Biol. 2010;7:582-5.
-
(2010)
RNA Biol.
, vol.7
, pp. 582-585
-
-
Hung, T.1
Chang, H.Y.2
-
56
-
-
70349093091
-
New meaning in the message: Noncoding RNAs and their role in retinal development
-
Rapicavoli NA, Blackshaw S. New meaning in the message: noncoding RNAs and their role in retinal development. Dev Dyn. 2009;238:2103-14.
-
(2009)
Dev Dyn.
, vol.238
, pp. 2103-2114
-
-
Rapicavoli, N.A.1
Blackshaw, S.2
-
57
-
-
80052815461
-
Noncoding RNAs and enhancers: Complications of a long-distance relationship
-
Orom UA, Shiekhattar R. Noncoding RNAs and enhancers: complications of a long-distance relationship. Trends Genet. 2011;27:433-9.
-
(2011)
Trends Genet.
, vol.27
, pp. 433-439
-
-
Orom, U.A.1
Shiekhattar, R.2
-
58
-
-
55349109963
-
Polycomb proteins targeted by a short repeat RNA to the mouse X chromosome
-
Zhao J, Sun BK, Erwin JA, Song JJ, Lee JT. Polycomb proteins targeted by a short repeat RNA to the mouse X chromosome. Science. 2008;322:750-6.
-
(2008)
Science.
, vol.322
, pp. 750-756
-
-
Zhao, J.1
Sun, B.K.2
Erwin, J.A.3
Song, J.J.4
Lee, J.T.5
-
59
-
-
35148898348
-
A histone H3 lysine 27 demethylase regulates animal posterior development
-
DOI 10.1038/nature06192, PII NATURE06192
-
Lan F, et al. A histone H3 lysine 27 demethylase regulates animal posterior development. Nature. 2007;449:689-94. (Pubitemid 47552096)
-
(2007)
Nature
, vol.449
, Issue.7163
, pp. 689-694
-
-
Lan, F.1
Bayliss, P.E.2
Rinn, J.L.3
Whetstine, J.R.4
Wang, J.K.5
Chen, S.6
Iwase, S.7
Alpatov, R.8
Issaeva, I.9
Canaani, E.10
Roberts, T.M.11
Chang, H.Y.12
Shi, Y.13
-
60
-
-
34547624303
-
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
-
DOI 10.1038/nature06008, PII NATURE06008
-
Mikkelsen TS, et al. Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. Nature. 2007;448:553-60. (Pubitemid 47206934)
-
(2007)
Nature
, vol.448
, Issue.7153
, pp. 553-560
-
-
Mikkelsen, T.S.1
Ku, M.2
Jaffe, D.B.3
Issac, B.4
Lieberman, E.5
Giannoukos, G.6
Alvarez, P.7
Brockman, W.8
Kim, T.-K.9
Koche, R.P.10
Lee, W.11
Mendenhall, E.12
O'Donovan, A.13
Presser, A.14
Russ, C.15
Xie, X.16
Meissner, A.17
Wernig, M.18
Jaenisch, R.19
Nusbaum, C.20
Lander, E.S.21
Bernstein, B.E.22
more..
-
61
-
-
0001343810
-
Bcl-2 promotes regeneration of severed axons in mammalian CNS
-
DOI 10.1038/385434a0
-
Chen DF, Schneider GE, Martinou JC, Tonegawa S. Bcl-2 promotes regeneration of severed axons in mammalian CNS. Nature. 1997;385:434-9. (Pubitemid 27065928)
-
(1997)
Nature
, vol.385
, Issue.6615
, pp. 434-439
-
-
Chen, D.F.1
Schneider, G.E.2
Martinou, J.-C.3
Tonegawa, S.4
-
62
-
-
0034926798
-
Math5 is required for retinal ganglion cell and optic nerve formation
-
Brown NL, Patel S, Brzezinski J, Glaser T. Math5 is required for retinal ganglion cell and optic nerve formation. Development. 2001;128:2497-508. (Pubitemid 32685091)
-
(2001)
Development
, vol.128
, Issue.13
, pp. 2497-2508
-
-
Brown, N.L.1
Patel, S.2
Brzezinski, J.3
Glaser, T.4
-
63
-
-
0035144456
-
Specification of neurotransmitter receptor identity in developing retina: The chick ATH5 promoter integrates the positive and negative effects of several bHLH proteins
-
Matter-Sadzinski L, Matter JM, Ong MT, Hernandez J, Ballivet M. Specification of neurotransmitter receptor identity in developing retina: the chick ATH5 promoter integrates the positive and negative effects of several bHLH proteins. Development. 2001;128:217-31. (Pubitemid 32124147)
-
(2001)
Development
, vol.128
, Issue.2
, pp. 217-231
-
-
Matter-Sadzinski, L.1
Matter, J.-M.2
Ong, M.-T.3
Hernandez, J.4
Ballivet, M.5
-
64
-
-
64249139170
-
Nuclear architecture of rod photoreceptor cells adapts to vision in mammalian evolution
-
Solovei I, et al. Nuclear architecture of rod photoreceptor cells adapts to vision in mammalian evolution. Cell. 2009;137:356-68.
-
(2009)
Cell.
, vol.137
, pp. 356-368
-
-
Solovei, I.1
-
65
-
-
56249129313
-
Differentiation of neural stem cells into oligodendrocytes: Involvement of the polycomb group protein Ezh2
-
Sher F, et al. Differentiation of neural stem cells into oligodendrocytes: involvement of the polycomb group protein Ezh2. Stem Cells. 2008;26:2875-83.
-
(2008)
Stem Cells.
, vol.26
, pp. 2875-2883
-
-
Sher, F.1
-
66
-
-
69949085080
-
Polycomb limits the neurogenic competence of neural precursor cells to promote astrogenic fate transition
-
Hirabayashi Y, et al. Polycomb limits the neurogenic competence of neural precursor cells to promote astrogenic fate transition. Neuron. 2009;63:600-13.
-
(2009)
Neuron.
, vol.63
, pp. 600-613
-
-
Hirabayashi, Y.1
-
67
-
-
74249105659
-
Essential role of the histone methyltransferase G9a in cocaine-induced plasticity
-
Maze I, et al. Essential role of the histone methyltransferase G9a in cocaine-induced plasticity. Science. 2010;327:213-6.
-
(2010)
Science.
, vol.327
, pp. 213-216
-
-
Maze, I.1
-
68
-
-
59149096820
-
MED19 and MED26 are synergistic functional targets of the RE1 silencing transcription factor in epigenetic silencing of neuronal gene expression
-
Ding N, et al. MED19 and MED26 are synergistic functional targets of the RE1 silencing transcription factor in epigenetic silencing of neuronal gene expression. J Biol Chem. 2009;284:2648-56.
-
(2009)
J Biol Chem.
, vol.284
, pp. 2648-2656
-
-
Ding, N.1
-
69
-
-
0032569014
-
The PR domain of the Rb-binding zinc finger protein RIZ1 is a protein binding interface and is related to the SET domain functioning in chromatin- mediated gene expression
-
DOI 10.1074/jbc.273.26.15933
-
Huang S, Shao G, Liu L. The PR domain of the Rb-binding zinc finger protein RIZ1 is a protein binding interface and is related to the SET domain functioning in chromatin-mediated gene expression. J Biol Chem. 1998;273:15933-9. (Pubitemid 28311357)
-
(1998)
Journal of Biological Chemistry
, vol.273
, Issue.26
, pp. 15933-15939
-
-
Huang, S.1
Shao, G.2
Liu, L.3
-
70
-
-
0022540321
-
CpG-rich islands and the function of DNA methylation
-
Bird AP. CpG-rich islands and the function of DNA methylation. Nature. 1986;321:209-13. (Pubitemid 16016411)
-
(1986)
Nature
, vol.321
, Issue.6067
, pp. 209-213
-
-
Bird, A.P.1
-
71
-
-
49649125042
-
Genome-scale DNA methylation maps of pluripotent and differentiated cells
-
Meissner A, et al. Genome-scale DNA methylation maps of pluripotent and differentiated cells. Nature. 2008;454:766-70.
-
(2008)
Nature.
, vol.454
, pp. 766-770
-
-
Meissner, A.1
-
72
-
-
77649267695
-
Dynamic changes in the human methylome during differentiation
-
Laurent L, et al. Dynamic changes in the human methylome during differentiation. Genome Res. 2010;20:320-31.
-
(2010)
Genome Res.
, vol.20
, pp. 320-331
-
-
Laurent, L.1
-
73
-
-
79959990071
-
Regulation of mammalian DNA methyltransferases: A route to new mechanisms
-
Denis H, Ndlovu MN, Fuks F. Regulation of mammalian DNA methyltransferases: a route to new mechanisms. EMBO Rep. 2011;12:647-56.
-
(2011)
EMBO Rep.
, vol.12
, pp. 647-656
-
-
Denis, H.1
Ndlovu, M.N.2
Fuks, F.3
-
74
-
-
0037112369
-
Histone H3-lysine 9 methylation is associated with aberrant gene silencing in cancer cells and is rapidly reversed by 5-aza-2'-deoxycytidine
-
Nguyen CT, et al. Histone H3-lysine 9 methylation is associated with aberrant gene silencing in cancer cells and is rapidly reversed by 5-aza-2'-deoxycytidine. Cancer Res. 2002;62:6456-61. (Pubitemid 35364106)
-
(2002)
Cancer Research
, vol.62
, Issue.22
, pp. 6456-6461
-
-
Nguyen, C.T.1
Weisenberger, D.J.2
Velicescu, M.3
Gonzales, F.A.4
Lin, J.C.Y.5
Liang, G.6
Jones, P.A.7
-
75
-
-
0038003140
-
Role of histone methyltransferase G9a in CpG methylation of the Prader-Willi syndrome imprinting center
-
DOI 10.1074/jbc.M211753200
-
Xin Z, et al. Role of histone methyltransferase G9a in CpG methylation of the Prader-Willi syndrome imprinting center. J Biol Chem. 2003;278:14996-5000. (Pubitemid 36799831)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.17
, pp. 14996-15000
-
-
Xin, Z.1
Tachibana, M.2
Guggiari, M.3
Heard, E.4
Shinkai, Y.5
Wagstaff, J.6
-
76
-
-
10744230544
-
Suv39h-mediated histone H3 lysine 9 methylation directs DNA methylation to major satellite repeats at pericentric heterochromatin
-
DOI 10.1016/S0960-9822(03)00432-9
-
Lehnertz B, et al. Suv39h-mediated histone H3 lysine 9 methylation directs DNA methylation to major satellite repeats at pericentric heterochromatin. Curr Biol. 2003;13:1192-200. (Pubitemid 36872941)
-
(2003)
Current Biology
, vol.13
, Issue.14
, pp. 1192-1200
-
-
Lehnertz, B.1
Ueda, Y.2
Derijck, A.A.H.A.3
Braunschweig, U.4
Perez-Burgos, L.5
Kubicek, S.6
Chen, T.7
Li, E.8
Jenuwein, T.9
Peters, A.H.F.M.10
-
77
-
-
58149156264
-
The lysine demethylase LSD1 (KDM1) is required for maintenance of global DNA methylation
-
Wang J, et al. The lysine demethylase LSD1 (KDM1) is required for maintenance of global DNA methylation. Nat Genet. 2009;41:125-9.
-
(2009)
Nat Genet.
, vol.41
, pp. 125-129
-
-
Wang, J.1
-
78
-
-
80053935982
-
Structural basis for specific binding of human MPP8 chromodomain to histone H3 methylated at lysine 9
-
Li J, et al. Structural basis for specific binding of human MPP8 chromodomain to histone H3 methylated at lysine 9. PLoS One. 2011;6:e25104.
-
(2011)
PLoS One.
, vol.6
-
-
Li, J.1
-
79
-
-
82555193236
-
MPP8 mediates the interactions between DNA methyltransferase Dnmt3a and H3K9 methyltransferase GLP/ G9a
-
Chang Y, et al. MPP8 mediates the interactions between DNA methyltransferase Dnmt3a and H3K9 methyltransferase GLP/ G9a. Nat Commun. 2011;2:533.
-
(2011)
Nat Commun.
, vol.2
, pp. 533
-
-
Chang, Y.1
-
80
-
-
78651491413
-
A role for DNA methylation in regulation of EphA5 receptor expression in the mouse retina
-
Petkova TD, Seigel GM, Otteson DC. A role for DNA methylation in regulation of EphA5 receptor expression in the mouse retina. Vision Res. 2011;51:260-8.
-
(2011)
Vision Res.
, vol.51
, pp. 260-268
-
-
Petkova, T.D.1
Seigel, G.M.2
Otteson, D.C.3
-
81
-
-
79960413075
-
Genetic dissection of EphA receptor signaling dynamics during retinotopic mapping
-
Bevins N, Lemke G, Reber M. Genetic dissection of EphA receptor signaling dynamics during retinotopic mapping. J Neurosci. 2011;31:10302-10.
-
(2011)
J Neurosci.
, vol.31
, pp. 10302-10310
-
-
Bevins, N.1
Lemke, G.2
Reber, M.3
-
82
-
-
0030798245
-
Histone acetylation in chromatin structure and transcription
-
DOI 10.1038/38664
-
Grunstein M. Histone acetylation in chromatin structure and transcription. Nature. 1997;389:349-52. (Pubitemid 27415209)
-
(1997)
Nature
, vol.389
, Issue.6649
, pp. 349-352
-
-
Grunstein, M.1
-
83
-
-
33847076849
-
Chromatin modifications and their function
-
DOI 10.1016/j.cell.2007.02.005, PII S0092867407001845
-
Kouzarides T. Chromatin modifications and their function. Cell. 2007;128:693-705. (Pubitemid 46273577)
-
(2007)
Cell
, vol.128
, Issue.4
, pp. 693-705
-
-
Kouzarides, T.1
-
84
-
-
33847070442
-
The role of chromatin during transcription
-
DOI 10.1016/j.cell.2007.01.015, PII S0092867407001092
-
Li B, Carey M, Workman JL. The role of chromatin during transcription. Cell. 2007;128:707-19. (Pubitemid 46273570)
-
(2007)
Cell
, vol.128
, Issue.4
, pp. 707-719
-
-
Li, B.1
Carey, M.2
Workman, J.L.3
-
85
-
-
0032732788
-
Relationships between chromatin organization and DNA methylation in determining gene expression
-
DOI 10.1006/scbi.1999.0134
-
Jones PL, Wolffe AP. Relationships between chromatin organization and DNA methylation in determining gene expression. Semin Cancer Biol. 1999;9:339-47. (Pubitemid 29532860)
-
(1999)
Seminars in Cancer Biology
, vol.9
, Issue.5
, pp. 339-347
-
-
Jones, P.L.1
Wolffe, A.P.2
-
86
-
-
33745727065
-
Histone modification and the control of heterochromatic gene silencing in Drosophila
-
Ebert A, Lein S, Schotta G, Reuter G. Histone modification and the control of heterochromatic gene silencing in Drosophila. Chromosome Res. 2006;14:377-92.
-
(2006)
Chromosome Res.
, vol.14
, pp. 377-392
-
-
Ebert, A.1
Lein, S.2
Schotta, G.3
Reuter, G.4
-
87
-
-
77953808789
-
Epigenetic regulatory mechanisms in vertebrate eye development and disease
-
Cvekl A, Mitton KP. Epigenetic regulatory mechanisms in vertebrate eye development and disease. Heredity. 2010;105:135-51.
-
(2010)
Heredity.
, vol.105
, pp. 135-151
-
-
Cvekl, A.1
Mitton, K.P.2
-
88
-
-
0034673540
-
P300/CBP acts as a coactivator of the cone-rod homeobox transcription factor
-
DOI 10.1006/bbrc.2000.2304
-
Yanagi Y, Masuhiro Y, Mori M, Yanagisawa J, Kato S. p300/CBP acts as a coactivator of the cone-rod homeobox transcription factor. Biochem Biophys Res Commun. 2000;269:410-4. (Pubitemid 30440314)
-
(2000)
Biochemical and Biophysical Research Communications
, vol.269
, Issue.2
, pp. 410-414
-
-
Yanagi, Y.1
Masuhiro, Y.2
Mori, M.3
Yanagisawa, J.4
Kato, S.5
-
89
-
-
34848832380
-
Crx activates opsin transcription by recruiting HAT-containing co-activators and promoting histone acetylation
-
Peng GH, Chen S. Crx activates opsin transcription by recruiting HAT-containing co-activators and promoting histone acetylation. Hum Mol Genet. 2007;16:3433-52.
-
(2007)
Hum Mol Genet.
, vol.16
, pp. 3433-3452
-
-
Peng, G.H.1
Chen, S.2
-
90
-
-
0347287040
-
Interference of Crx-dependent transcription by ataxin-7 involves interaction between th glutamine regions and requires the ataxin-7 carboxy-terminal region for nuclear localization
-
DOI 10.1093/hmg/ddh005
-
Chen S, et al. Interference of Crx-dependent transcription by ataxin-7 involves interaction between the glutamine regions and requires the ataxin-7 carboxy-terminal region for nuclear localization. Hum Mol Genet. 2004;13:53-67. (Pubitemid 38072135)
-
(2004)
Human Molecular Genetics
, vol.13
, Issue.1
, pp. 53-67
-
-
Chen, S.1
Peng, G.-H.2
Wang, X.3
Smith, A.C.4
Grote, S.K.5
Sopher, B.L.6
La Spada, A.R.7
-
91
-
-
20844444637
-
Polyglutamine-expanded ataxin-7 inhibits STAGA histone acetyltransferase activity to produce retinal degeneration
-
DOI 10.1073/pnas.0503505102
-
Palhan VB, et al. Polyglutamine-expanded ataxin-7 inhibits STAGA histone acetyltransferase activity to produce retinal degeneration. Proc Natl Acad Sci U S A. 2005;102:8472-7. (Pubitemid 40862760)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.24
, pp. 8472-8477
-
-
Palhan, V.B.1
Chen, S.2
Peng, G.-H.3
Tjernberg, A.4
Gamper, A.M.5
Fan, Y.6
Chait, B.T.7
La Spada, A.R.8
Roeder, R.G.9
-
92
-
-
33144469085
-
Glutamine-expanded ataxin-7 alters TFTC/ STAGA recruitment and chromatin structure leading to photoreceptor dysfunction
-
Helmlinger D, et al. Glutamine-expanded ataxin-7 alters TFTC/ STAGA recruitment and chromatin structure leading to photoreceptor dysfunction. PLoS Biol. 2006;4:e67.
-
(2006)
PLoS Biol.
, vol.4
-
-
Helmlinger, D.1
-
93
-
-
77957993889
-
Lessons from genome-wide studies: An integrated definition of the coactivator function of histone acetyl transferases
-
Anamika K, et al. Lessons from genome-wide studies: an integrated definition of the coactivator function of histone acetyl transferases. Epigenetics & chromatin. 2010;3:18.
-
(2010)
Epigenetics & Chromatin.
, vol.3
, pp. 18
-
-
Anamika, K.1
-
94
-
-
34547864553
-
Distinct GCN5/PCAF-containing complexes function as co-activators and are involved in transcription factor and global histone acetylation
-
DOI 10.1038/sj.onc.1210604, PII 1210604
-
Nagy Z, Tora L. Distinct GCN5/PCAF-containing complexes function as co-activators and are involved in transcription factor and global histone acetylation. Oncogene. 2007;26:5341-57. (Pubitemid 47255920)
-
(2007)
Oncogene
, vol.26
, Issue.37
, pp. 5341-5357
-
-
Nagy, Z.1
Tora, L.2
-
95
-
-
75749144718
-
Valproic acid-mediated neuroprotection and regeneration in injured retinal ganglion cells
-
Biermann J, et al. Valproic acid-mediated neuroprotection and regeneration in injured retinal ganglion cells. Invest Ophthalmol Vis Sci. 2010;51:526-34.
-
(2010)
Invest Ophthalmol Vis Sci.
, vol.51
, pp. 526-534
-
-
Biermann, J.1
-
96
-
-
80053952176
-
Valproate protects the retina from endoplasmic reticulum stress-induced apoptosis after ischemia-reperfusion injury
-
Zhang Z, et al. Valproate protects the retina from endoplasmic reticulum stress-induced apoptosis after ischemia-reperfusion injury. Neurosci Lett. 2011;504:88-92.
-
(2011)
Neurosci Lett.
, vol.504
, pp. 88-92
-
-
Zhang, Z.1
-
97
-
-
79952136849
-
Histone deacetylase inhibitors sodium butyrate and valproic acid delay spontaneous cell death in purified rat retinal ganglion cells
-
Biermann J, Boyle J, Pielen A, Lagreze WA. Histone deacetylase inhibitors sodium butyrate and valproic acid delay spontaneous cell death in purified rat retinal ganglion cells. Mol Vis. 2011;17:395-403.
-
(2011)
Mol Vis.
, vol.17
, pp. 395-403
-
-
Biermann, J.1
Boyle, J.2
Pielen, A.3
Lagreze, W.A.4
-
98
-
-
77955709610
-
HDAC inhibition promotes neuronal outgrowth and counteracts growth cone collapse through CBP/p300 and P/CAFdependent p53 acetylation
-
Gaub P, et al. HDAC inhibition promotes neuronal outgrowth and counteracts growth cone collapse through CBP/p300 and P/CAFdependent p53 acetylation. Cell Death Differ. 2010;17:1392-408.
-
(2010)
Cell Death Differ.
, vol.17
, pp. 1392-1408
-
-
Gaub, P.1
-
99
-
-
78650806345
-
Therapeutic potential of valproic acid for retinitis pigmentosa
-
Clemson CM, et al. Therapeutic potential of valproic acid for retinitis pigmentosa. Br J Ophthalmol. 2011;95:89-93.
-
(2011)
Br J Ophthalmol.
, vol.95
, pp. 89-93
-
-
Clemson, C.M.1
-
100
-
-
79959694149
-
The nuclear deubiquitinase BAP1 is commonly inactivated by somatic mutations and 3p21.1 losses in malignant pleural mesothelioma
-
Bott M, et al. The nuclear deubiquitinase BAP1 is commonly inactivated by somatic mutations and 3p21.1 losses in malignant pleural mesothelioma. Nat Genet. 2011;43:668-72.
-
(2011)
Nat Genet.
, vol.43
, pp. 668-672
-
-
Bott, M.1
-
101
-
-
80053386896
-
Germline mutations in BAP1 predispose to melanocytic tumors
-
Wiesner T, et al. Germline mutations in BAP1 predispose to melanocytic tumors. Nat Genet. 2011;43:1018-21.
-
(2011)
Nat Genet.
, vol.43
, pp. 1018-1021
-
-
Wiesner, T.1
-
102
-
-
80053385701
-
Germline BAP1 mutations predispose to malignant mesothelioma
-
Testa JR, et al. Germline BAP1 mutations predispose to malignant mesothelioma. Nat Genet. 2011;43:1022-5.
-
(2011)
Nat Genet.
, vol.43
, pp. 1022-1025
-
-
Testa, J.R.1
-
103
-
-
84856023369
-
Germline BAP1 mutation predisposes to uveal melanoma, lung adenocarcinoma, meningioma, and other cancers
-
Abdel-Rahman MH, et al. Germline BAP1 mutation predisposes to uveal melanoma, lung adenocarcinoma, meningioma, and other cancers. J of Medic Genetics. 2011;48:856-9.
-
(2011)
J of Medic Genetics.
, vol.48
, pp. 856-859
-
-
Abdel-Rahman, M.H.1
-
104
-
-
7244234099
-
Role of histone H2A ubiquitination in Polycomb silencing
-
DOI 10.1038/nature02985
-
Wang H, et al. Role of histone H2A ubiquitination in Polycomb silencing. Nature. 2004;431:873-8. (Pubitemid 39434086)
-
(2004)
Nature
, vol.431
, Issue.7010
, pp. 873-878
-
-
Wang, H.1
Wang, L.2
Erdjument-Bromage, H.3
Vidal, M.4
Tempst, P.5
Jones, R.S.6
Zhang, Y.7
-
105
-
-
79955127071
-
The dimensionality of color vision in carriers of anomalous trichromacy
-
Jordan G, Deeb SS, Bosten JM, Mollon JD. The dimensionality of color vision in carriers of anomalous trichromacy. J Vis. 2010;10: 12.
-
(2010)
J Vis.
, vol.10
, pp. 12
-
-
Jordan, G.1
Deeb, S.S.2
Bosten, J.M.3
Mollon, J.D.4
-
106
-
-
0027156796
-
A study of women heterozygous for colour deficiencies
-
DOI 10.1016/0042-6989(93)90143-K
-
Jordan G, Mollon JD. A study of women heterozygous for colour deficiencies. Vis Res. 1993;33:1495-508. (Pubitemid 23197366)
-
(1993)
Vision Research
, vol.33
, Issue.11
, pp. 1495-1508
-
-
Jordan, G.1
Mollon, J.D.2
-
107
-
-
0034704328
-
Site-specific DNA hypomethylation permits expression of the IRBP gene
-
DOI 10.1016/S0006-8993(00)02990-5, PII S0006899300029905
-
Boatright JH, Nickerson JM, Borst DE. Site-specific DNA hypomethylation permits expression of the IRBP gene. Brain research. 2000;887:211-21. (Pubitemid 32008042)
-
(2000)
Brain Research
, vol.887
, Issue.1
, pp. 211-221
-
-
Boatright, J.H.1
Nickerson, J.M.2
Borst, D.E.3
-
108
-
-
77958569306
-
Aberrant demethylation of the recoverin gene is involved in the aberrant expression of recoverin in cancer cells
-
Bazhin AV, De Smet C, Golovastova MO, Schmidt J, Philippov PP. Aberrant demethylation of the recoverin gene is involved in the aberrant expression of recoverin in cancer cells. Exp Dermatol. 2010;19:1023-5.
-
(2010)
Exp Dermatol.
, vol.19
, pp. 1023-1025
-
-
Bazhin, A.V.1
De Smet, C.2
Golovastova, M.O.3
Schmidt, J.4
Philippov, P.P.5
-
109
-
-
77955845423
-
Deletion of the X-linked opsin gene array locus control region (LCR) results in disruption of the cone mosaic
-
Carroll J, et al. Deletion of the X-linked opsin gene array locus control region (LCR) results in disruption of the cone mosaic. Vision Res. 2010;50:1989-99.
-
(2010)
Vision Res.
, vol.50
, pp. 1989-1999
-
-
Carroll, J.1
-
110
-
-
80054683247
-
The linker histone H1C contributes to the SCA7 nuclear phenotype
-
Kizilyaprak C, Spehner D, Devys D, Schultz P. The linker histone H1C contributes to the SCA7 nuclear phenotype. Nucleus. 2011;2:444-54.
-
(2011)
Nucleus.
, vol.2
, pp. 444-454
-
-
Kizilyaprak, C.1
Spehner, D.2
Devys, D.3
Schultz, P.4
-
112
-
-
84863988774
-
Histone acetyltransferases cbp and p300 are required in rod photoreceptors to maintain retina structure and function
-
Hennig AK, Wang H, & Chen S (2010) Histone acetyltransferases cbp and p300 are required in rod photoreceptors to maintain retina structure and function ARVO Meeting Abstracts:1085.
-
(2010)
ARVO Meeting
, pp. 1085
-
-
Hennig, A.K.1
Wang, H.2
Chen, S.3
-
113
-
-
69449102464
-
Genome-wide mapping of HATs and HDACs reveals distinct functions in active and inactive genes
-
Wang Z, et al. Genome-wide mapping of HATs and HDACs reveals distinct functions in active and inactive genes. Cell. 2009;138:1019-31.
-
(2009)
Cell.
, vol.138
, pp. 1019-1031
-
-
Wang, Z.1
-
114
-
-
38149068875
-
ATFTC/STAGA module mediates histone H2A and H2B deubiquitination, coactivates nuclear receptors, and counteracts heterochromatin silencing
-
Zhao Y, et al. ATFTC/STAGA module mediates histone H2A and H2B deubiquitination, coactivates nuclear receptors, and counteracts heterochromatin silencing. Mol Cell. 2008;29:92-101.
-
(2008)
Mol Cell.
, vol.29
, pp. 92-101
-
-
Zhao, Y.1
-
115
-
-
38149078715
-
The putative cancer stem cell marker USP22 is a subunit of the human SAGA complex required for activated transcription and cell-cycle progression
-
Zhang XY, et al. The putative cancer stem cell marker USP22 is a subunit of the human SAGA complex required for activated transcription and cell-cycle progression. Mol Cell. 2008;29:102-11.
-
(2008)
Mol Cell.
, vol.29
, pp. 102-111
-
-
Zhang, X.Y.1
-
116
-
-
33144469732
-
Polyglutamine expansion causes neurodegeneration by altering the neuronal differentiation program
-
DOI 10.1093/hmg/ddi483
-
Abou-Sleymane G, et al. Polyglutamine expansion causes neurodegeneration by altering the neuronal differentiation program. Hum Mol Genet. 2006;15:691-703. (Pubitemid 43264694)
-
(2006)
Human Molecular Genetics
, vol.15
, Issue.5
, pp. 691-703
-
-
Abou-Sleymane, G.1
Chalmel, F.2
Helmlinger, D.3
Lardenois, A.4
Thibault, C.5
Weber, C.6
Merienne, K.7
Mandel, J.-L.8
Poch, O.9
Devys, D.10
Trottier, Y.11
-
117
-
-
84863982953
-
Gcn5 loss-of-function accelerates cerebellar and retinal degeneration in a SCA7 mouse model
-
Chen YC, et al. (2011) Gcn5 loss-of-function accelerates cerebellar and retinal degeneration in a SCA7 mouse model. Human molecular genetics.
-
(2011)
Human Molecular Genetics
-
-
Chen, Y.C.1
-
118
-
-
77956985453
-
The genomic, biochemical, and cellular responses of the retina in inherited photoreceptor degenerations and prospects for the treatment of these disorders
-
Bramall AN, Wright AF, Jacobson SG, McInnes RR. The genomic, biochemical, and cellular responses of the retina in inherited photoreceptor degenerations and prospects for the treatment of these disorders. Annu Rev Neurosci. 2010;33:441-72.
-
(2010)
Annu Rev Neurosci.
, vol.33
, pp. 441-472
-
-
Bramall, A.N.1
Wright, A.F.2
Jacobson, S.G.3
McInnes, R.R.4
-
119
-
-
77958558027
-
Excessive HDAC activation is critical for neurodegeneration in the rd1 mouse
-
Sancho-Pelluz J, et al. Excessive HDAC activation is critical for neurodegeneration in the rd1 mouse. Cell death & disease. 2010;1:e24.
-
(2010)
Cell Death & Disease.
, vol.1
-
-
Sancho-Pelluz, J.1
-
120
-
-
58149389397
-
HDAC4 regulates neuronal survival in normal and diseased retinas
-
Chen B, Cepko CL. HDAC4 regulates neuronal survival in normal and diseased retinas. Science. 2009;323:256-9.
-
(2009)
Science.
, vol.323
, pp. 256-259
-
-
Chen, B.1
Cepko, C.L.2
-
121
-
-
0000506532
-
The organisation of chromatin loops: Characterization of a scaffold attachment site
-
Gasser SM, Laemmli UK. The organisation of chromatin loops: characterization of a scaffold attachment site. EMBO J. 1986;5:511-8.
-
(1986)
EMBO J.
, vol.5
, pp. 511-518
-
-
Gasser, S.M.1
Laemmli, U.K.2
-
122
-
-
0023050122
-
Cohabitation of scaffold binding regions with upstream/enhancer elements of three developmentally regulated genes of D
-
Gasser SM, Laemmli UK. Cohabitation of scaffold binding regions with upstream/enhancer elements of three developmentally regulated genes of D. melanogaster. Cell. 1986;46:521-30.
-
(1986)
Melanogaster. Cell.
, vol.46
, pp. 521-530
-
-
Gasser, S.M.1
Laemmli, U.K.2
-
123
-
-
0017652886
-
The structure of histone-depleted metaphase chromosomes
-
Paulson JR, Laemmli UK. The structure of histone-depleted metaphase chromosomes. Cell. 1977;12:817-28.
-
(1977)
Cell.
, vol.12
, pp. 817-828
-
-
Paulson, J.R.1
Laemmli, U.K.2
-
124
-
-
0018581746
-
Metaphase chromosome structure: Evidence for a radial loop model
-
Marsden MP, Laemmli UK. Metaphase chromosome structure: evidence for a radial loop model. Cell. 1979;17:849-58. (Pubitemid 9252294)
-
(1979)
Cell
, vol.17
, Issue.4
, pp. 849-858
-
-
Marsden, M.P.F.1
Laemmli, U.K.2
-
125
-
-
0037083376
-
Capturing chromosome conformation
-
DOI 10.1126/science.1067799
-
Dekker J, Rippe K, Dekker M, Kleckner N. Capturing chromosome conformation. Science. 2002;295:1306-11. (Pubitemid 34157624)
-
(2002)
Science
, vol.295
, Issue.5558
, pp. 1306-1311
-
-
Dekker, J.1
Rippe, K.2
Dekker, M.3
Kleckner, N.4
-
126
-
-
33745743206
-
Genome-wide scanning of HoxB1-associated loci in mouse ES cells using an open-ended Chromosome Conformation Capture methodology
-
DOI 10.1007/s10577-006-1075-0
-
Wurtele H, Chartrand P. Genome-wide scanning of HoxB1-associated loci in mouse ES cells using an open-ended Chromosome Conformation Capture methodology. Chromosome Res. 2006;14:477-95. (Pubitemid 44015120)
-
(2006)
Chromosome Research
, vol.14
, Issue.5
, pp. 477-495
-
-
Wurtele, H.1
Chartrand, P.2
-
127
-
-
33750203582
-
Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra- and interchromosomal interactions
-
DOI 10.1038/ng1891, PII NG1891
-
Zhao Z, et al. Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intraand interchromosomal interactions. Nat Genet. 2006;38:1341-7. (Pubitemid 44646299)
-
(2006)
Nature Genetics
, vol.38
, Issue.11
, pp. 1341-1347
-
-
Zhao, Z.1
Tavoosidana, G.2
Sjolinder, M.3
Gondor, A.4
Mariano, P.5
Wang, S.6
Kanduri, C.7
Lezcano, M.8
Sandhu, K.S.9
Singh, U.10
Pant, V.11
Tiwari, V.12
Kurukuti, S.13
Ohlsson, R.14
-
128
-
-
33750212321
-
Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C)
-
DOI 10.1038/ng1896, PII NG1896
-
Simonis M, et al. Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C). Nat Genet. 2006;38:1348-54. (Pubitemid 44646300)
-
(2006)
Nature Genetics
, vol.38
, Issue.11
, pp. 1348-1354
-
-
Simonis, M.1
Klous, P.2
Splinter, E.3
Moshkin, Y.4
Willemsen, R.5
De Wit, E.6
Van Steensel, B.7
De Laat, W.8
-
129
-
-
33749400168
-
Chromosome Conformation Capture Carbon Copy (5C): A massively parallel solution for mapping interactions between genomic elements
-
DOI 10.1101/gr.5571506
-
Dostie J, et al. Chromosome Conformation Capture Carbon Copy (5C): a massively parallel solution for mapping interactions between genomic elements. Genome Res. 2006;16:1299-309. (Pubitemid 44506963)
-
(2006)
Genome Research
, vol.16
, Issue.10
, pp. 1299-1309
-
-
Dostie, J.1
Richmond, T.A.2
Arnaout, R.A.3
Selzer, R.R.4
Lee, W.L.5
Honan, T.A.6
Rubio, E.D.7
Krumm, A.8
Lamb, J.9
Nusbaum, C.10
Green, R.D.11
Dekker, J.12
-
130
-
-
70349873824
-
Comprehensive mapping of long-range interactions reveals folding principles of the human genome
-
Lieberman-Aiden E, et al. Comprehensive mapping of long-range interactions reveals folding principles of the human genome. Science. 2009;326:289-93.
-
(2009)
Science.
, vol.326
, pp. 289-293
-
-
Lieberman-Aiden, E.1
-
131
-
-
33646526019
-
Chromosome territoriesa functional nuclear landscape
-
Cremer T, et al. Chromosome territoriesa functional nuclear landscape. Curr Opin Cell Biol. 2006;18:307-16.
-
(2006)
Curr Opin Cell Biol.
, vol.18
, pp. 307-316
-
-
Cremer, T.1
-
133
-
-
65149100263
-
Chromatin conformation signatures of cellular differentiation
-
Fraser J, et al. Chromatin conformation signatures of cellular differentiation. Genome Biol. 2009;10:R37.
-
(2009)
Genome Biol.
, vol.10
-
-
Fraser, J.1
-
134
-
-
85052429852
-
Multicolor 3D fluorescence in situ hybridization for imaging interphase chromosomes
-
Cremer M, et al. Multicolor 3D fluorescence in situ hybridization for imaging interphase chromosomes. Methods in molecular biol. 2008;463:205-39.
-
(2008)
Methods in Molecular Biol.
, vol.463
, pp. 205-239
-
-
Cremer, M.1
-
135
-
-
73349090560
-
Preferential associations between coregulated genes reveal a transcriptional interactome in erythroid cells
-
Schoenfelder S, et al. Preferential associations between coregulated genes reveal a transcriptional interactome in erythroid cells. Nat Genet. 2010;42:53-61.
-
(2010)
Nat Genet.
, vol.42
, pp. 53-61
-
-
Schoenfelder, S.1
-
136
-
-
34548118264
-
Biochemistry meets nuclear architecture: Multicolor immuno-FISH for co-localization analysis of chromosome segments and differentially expressed gene loci with various histone methylations
-
DOI 10.1016/j.advenzreg.2007.01.005, PII S0065257107000027
-
Zinner R, Teller K, Versteeg R, Cremer T, Cremer M. Biochemistry meets nuclear architecture: multicolor immuno-FISH for colocalization analysis of chromosome segments and differentially expressed gene loci with various histone methylations. Adv Enzym Regul. 2007;47:223-41. (Pubitemid 47302079)
-
(2007)
Advances in Enzyme Regulation
, vol.47
, pp. 223-241
-
-
Zinner, R.1
Teller, K.2
Versteeg, R.3
Cremer, T.4
Cremer, M.5
-
137
-
-
79952267284
-
High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells
-
Boyle AP, et al. High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells. Genome Res. 2011;21:456-64.
-
(2011)
Genome Res.
, vol.21
, pp. 456-464
-
-
Boyle, A.P.1
-
138
-
-
79959349283
-
Genome-wide remodeling of the epigenetic landscape during myogenic differentiation
-
Asp P, et al. Genome-wide remodeling of the epigenetic landscape during myogenic differentiation. Proc Natl Acad Sci U S A. 2011;108:E149-158.
-
(2011)
Proc Natl Acad Sci U S A.
, vol.108
-
-
Asp, P.1
-
139
-
-
80054702528
-
Two forms of loops generate the chromatin conformation of the immunoglobulin heavy-chain gene locus
-
Guo C, et al. Two forms of loops generate the chromatin conformation of the immunoglobulin heavy-chain gene locus. Cell. 2011;147:332-43.
-
(2011)
Cell.
, vol.147
, pp. 332-343
-
-
Guo, C.1
-
140
-
-
34250777112
-
The nuclear envelope and transcriptional control
-
DOI 10.1038/nrg2122, PII NRG2122
-
Akhtar A, Gasser SM. The nuclear envelope and transcriptional control. Nat Rev Genet. 2007;8:507-17. (Pubitemid 46955211)
-
(2007)
Nature Reviews Genetics
, vol.8
, Issue.7
, pp. 507-517
-
-
Akhtar, A.1
Gasser, S.M.2
-
141
-
-
80054110441
-
The dynamic architecture of Hox gene clusters
-
Noordermeer D, et al. The dynamic architecture of Hox gene clusters. Science. 2011;334:222-5.
-
(2011)
Science.
, vol.334
, pp. 222-225
-
-
Noordermeer, D.1
-
142
-
-
49049110041
-
Chromatin organization and nuclear microenvironments in cancer cells
-
He S, et al. Chromatin organization and nuclear microenvironments in cancer cells. J Cell Biochem. 2008;104:2004-15.
-
(2008)
J Cell Biochem.
, vol.104
, pp. 2004-2015
-
-
He, S.1
-
143
-
-
0030047457
-
RER, an evolutionarily conserved sequence upstream of the rhodopsin gene, has enhancer activity
-
DOI 10.1074/jbc.271.5.2667
-
Nie Z, Chen S, Kumar R, Zack DJ. RER, an evolutionarily conserved sequence upstream of the rhodopsin gene, has enhancer activity. J Biol Chem. 1996;271:2667-75. (Pubitemid 26047881)
-
(1996)
Journal of Biological Chemistry
, vol.271
, Issue.5
, pp. 2667-2675
-
-
Nie, Z.1
Chen, S.2
Kumar, R.3
Zack, D.J.4
-
145
-
-
79956333391
-
The Spalt family transcription factor Sall3 regulates the development of cone photoreceptors and retinal horizontal interneurons
-
de Melo J, Peng GH, Chen S, Blackshaw S. The Spalt family transcription factor Sall3 regulates the development of cone photoreceptors and retinal horizontal interneurons. Development. 2011;138:2325-36.
-
(2011)
Development.
, vol.138
, pp. 2325-2336
-
-
De Melo, J.1
Peng, G.H.2
Chen, S.3
Blackshaw, S.4
-
146
-
-
34548565667
-
Quantitative analysis of chromosome conformation capture assays (3C-qPCR)
-
Hagege H, et al. Quantitative analysis of chromosome conformation capture assays (3C-qPCR). Nat Protoc. 2007;2:1722-33.
-
(2007)
Nat Protoc.
, vol.2
, pp. 1722-1733
-
-
Hagege, H.1
-
147
-
-
77956216933
-
In vivo chromatin organization of mouse rod photoreceptors correlates with histone modifications
-
Kizilyaprak C, Spehner D, Devys D, Schultz P. In vivo chromatin organization of mouse rod photoreceptors correlates with histone modifications. PLoS One. 2010;5:e11039.
-
(2010)
PLoS One.
, vol.5
-
-
Kizilyaprak, C.1
Spehner, D.2
Devys, D.3
Schultz, P.4
-
148
-
-
25144491542
-
Role of Rb family in the epigenetic definition of chromatin
-
Gonzalo S, Blasco MA. Role of Rb family in the epigenetic definition of chromatin. Cell Cycle. 2005;4:752-5. (Pubitemid 41353823)
-
(2005)
Cell Cycle
, vol.4
, Issue.6
, pp. 752-755
-
-
Gonzalo, S.1
Blasco, M.A.2
-
149
-
-
80052402894
-
Transcription factories and nuclear organization of the genome
-
Eskiw CH, et al. Transcription factories and nuclear organization of the genome. Cold Spring Harbor symposia on quantitative biol. 2010;75:501-6.
-
(2010)
Cold Spring Harbor Symposia on Quantitative Biol.
, vol.75
, pp. 501-506
-
-
Eskiw, C.H.1
-
150
-
-
66949119997
-
Inverted rod nuclei see the light
-
Eskiw C, Fraser P. Inverted rod nuclei see the light. Nature cell biol. 2009;11:680-1.
-
(2009)
Nature Cell Biol.
, vol.11
, pp. 680-681
-
-
Eskiw, C.1
Fraser, P.2
-
151
-
-
33745304849
-
Compensation by tumor suppressor genes during retinal development in mice and humans
-
Donovan SL, Schweers B, Martins R, Johnson D, Dyer MA. Compensation by tumor suppressor genes during retinal development in mice and humans. BMC Biol. 2006;4:14.
-
(2006)
BMC Biol.
, vol.4
, pp. 14
-
-
Donovan, S.L.1
Schweers, B.2
Martins, R.3
Johnson, D.4
Dyer, M.A.5
-
152
-
-
33745593080
-
Nuclear and cytoplasmic interaction of pRb2/ p130 and ER-beta in MCF-7 breast cancer cells
-
Macaluso M, et al. Nuclear and cytoplasmic interaction of pRb2/ p130 and ER-beta in MCF-7 breast cancer cells. Annals of oncol: Official J of the European Soc for Medic Oncol/ESMO 17. 2006; Suppl 7:vii27-29.
-
(2006)
Annals of Oncol: Official J of the European Soc for Medic Oncol/ESMO 17
, Issue.SUPPL. 7
-
-
MacAluso, M.1
-
153
-
-
74149083175
-
PRb, a local chromatin organizer with global possibilities
-
Longworth MS, Dyson NJ. pRb, a local chromatin organizer with global possibilities. Chromosoma. 2010;119:1-11.
-
(2010)
Chromosoma.
, vol.119
, pp. 1-11
-
-
Longworth, M.S.1
Dyson, N.J.2
|