Molecular mechanisms involved in biofilm formation by food-associated bacteria

Biofilms in the Food and Beverage Industries

Volumn , Issue , 2009, Pages 42-98

  Smith, J ^a   Fratamico, P M ^a   Uhlich, G ^a  

^a EASTERN REGIONAL RESEARCH CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84862276280     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1533/9781845697167.1.42     Document Type: Chapter

References (292)

1. Abee T., Van Schaik W., Siezen R.J. Impact of genomics on microbial food safety. Trends Biotechnol 2004, 22:653-660.
2. Ahmer B.M.M. Cell-to-cell signaling in Escherichia coli and Salmonella enterica. Mol Microbiol 2004, 52:933-945.
3. Alfaro J.F., Zhang T., Wynn D.P., Karschner E.L., Zhou Z.S. Synthesis of LuxS inhibitors targeting bacterial cell-cell communication. Org Lett 2004, 6:3043-3046.
4. Altarriba M., Merino S., Gavi'n R., Canals R., Rabaan A., Shaw J.G., TomA'S J.M. A polar flagella operon (flg) of Aeromonas hydrophila contains genes required for lateral flagella expression. Microb Pathogen 2003, 34:249-259.
5. Ammor M.S., Michaelidis C., Nychas G.-J.E. Insights into the role of quorum sensing in food spoilage. J Food Prot 2008, 71:1510-1525.
6. Anderson G.G., Palermo J.L., Schilling J.D., Roth R., Heuser J., Hultgren S.J. Intracellular bacterial biofilm-like pods in urinary tract infections. Science 2003, 301:105-107.
7. Atkinson S., Chang C.-Y., Sockett R.E., Ca'mara M., Williams P. Quorum sensing in Yersinia enterocolitica controls swimming and swarming motility. J Bacteriol 2006, 188:1451-1461.
8. Auger S., Krin E., Aymerich S., Gohar M. Autoinducer 2 affects biofilm formation by Bacillus cereus. Appl Environ Microbiol 2006, 72:937-941.
9. Balestrino D., Haagensen J.A.J., Rich C., Forestier C. Characterization of type 2 Quorum sensing in Klebsiella pneumoniae and relationship with biofilm formation. J Bacteriol 2005, 187:2870-2880.
10. Bansal T., Englert D., Lee J., Hegde M., Wood T.K., Jayaaraman A. Differential effects of epinephrine, norepinephrine, and indole on Escherichia coli O157:H7 chemotaxis, colonization and gene expression. Infect Immun 2007, 75:4597-4607.
11. Bearson B.L., Bearson S.M.D. The role of the QseC quorum sensor kinase in colonization and norepinephrine-enchanced motility of Salmonella enterica serovar Typhimurium. Microb Pathogen 2007, 44:271-273.
12. Beenken K.E., Dunman P.M., Mcaleese F., Macapagal D., Murphy E., Projan S.J., Blevins J.S., Smeltzer M.S. Global gene expression in Staphyloccus aureus biofilms. J Bacteriol 2004, 186:4665-4684.
13. Bi Z.X., Liu Y.J., Lu C.P. Contribution of AhyR to virulence of Aeromonas hydrophila J-1. Res Vet Sci 2007, 83:156-159.
14. Blokesch M., Schoolnik G.R. Serogroup conversion of Vibrio cholerae in aquatic reservoirs. PLoS Pathog 2007, 3(6). e81.
15. Boddicker J.D., Anderson R.A., Jagnow J., Clegg S. Signature-tagged mutagenesis of Klebsiella pneumoniae to identify genes that influence biofilm formation on extracellular matrix material. Infect Immun 2006, 74:4590-4597.
16. Bonifield H.R., Hughes K.T. Flagellar phase variation in Salmonella enterica is mediated by a posttranscriptional control mechanism. J. Bacteriol 2003, 185:3567-3574.
17. BoŞGelmez-Tinaz G., Ulusory S., Aridoǧan B., Eroǧlu F., Kaya S. N-butanoyl-L-homoserine lactone (BHL) deficient Pseudomonas aeruginosa isolates from an intensive care unit. Microbiol Res 2005, 160:399-403.
18. Burton E., Gawande P.V., Yakandawala N., Lo Vetri K., Zhanel G.G., Romeo T., Friesen A.D., Madhyastha S. Antibiofilm activity of GlmU enzyme inhibitors against catheter-associated uropathogens. Antimicrob Agents Chemother 2006, 50:1835-1840.
19. Buswell C.M., Herlihy Y.M., Lawrence L.M., Mcguiggan J.T.M., Marsh P.D., Keevil C.W., Leach S.A. Extended survival and persistence of Campylobacter spp. in water and aquatic biofilms and their detection by immunofluorescent-antibody and rRNA staining. Appl Environ Microbiol 1998, 64:733-741.
20. Byers J.T., Lucas C., Salmond G.P.C., Welch M. Nonenzymatic turnover of an Erwinia carotovora quorum-sensing signaling molecule. J Bacteriol 2002, 184:1163-1171.
21. Caiazza N.C., O'Toole G.A. Alpha-toxin is required for biofilm formation by Staphylococcus aureus. J Bacteriol 2003, 185:3214-3217.
22. Camper A.K., Lechevallier M.W., Broadway S.C., Mcfeters G.A. Growth and persistence of pathogens on granular activated carbon filters. Appl Environ Microbiol 1985, 50:1378-1382.
23. Canals R., Altarriba M., Vilches S., Horsburgh G., Shaw J.G., TolmA'S J.M., Merino S. Analysis of the lateral flagellar gene system of Aeromonas hydrophila AH-3. J Bacteriol 2006, 188:852-862.
24. Canals R., Ramirez S., Vilches S., Horburgh G., Shaw J.G., TomA'S J.M., Merino S. Polar flagellum biogenesis in Aeromonas hydrophila. J Bacteriol 2006, 188:542-555.
25. Carter G.P., Purdy D., Williams P., Minton N.P. Quorum sensing in Clostridium difficile: analysis of a luxS-type signaling system. J Med Microbiol 2005, 54:119-127.
26. Case R.J., Labbate M., Kjelleberg S. AHL-driven quorum-sensing circuits: their frequency and function among the Proteobacteria. ISME J 2008, 2:345-349.
27. Chae M.S., Schraft H., Hansen L.T., Mackereth R. Effects of physicochemical surface characteristics of Listeria monocytogenes strains on attachment to glass. Food Microbiol 2006, 23:250-259.
28. Challan Belval S., Gal L., Margiewes S., Garmyn D., Piveteau P., Guzzo J. Assessment of the roles of LuxS, S-ribosyl homocysteine, and autoinducer 2 in cell attachment during biofilm formation by Listeria monocytogenes EGD-e. Appl Environ Microbiol 2006, 72:2644-2650.
29. Chiu S.Y., Ha S.Y., Chan C.F., Wong S.S.Y., Yuen K.Y., Chan K.L., Lau Y.L. The use of central venous catheter in paediatric haematology/oncology unit. HK J Paediatr (New Series) 1996, 1:64-66.
30. Choi J., Shin D., Ryu S. Implication of quorum sensing in Salmonella virulence: the luxS gene is necessary for expression of genes in pathogenicity island 1. Infect Immun 2007, 75:4885-4890.
31. Chowdhary P.K., Keshavan N., Nguyen H.Q., Peterson J.A., GonzA'Lez J.E., Haines D.C. Bacillus megaterium CYP102A1 oxidation of acyl homoserine lactones and acyl homoserines. Biochemistry 2007, 46:14429-14437.
32. 28 (FliA) in enterohaemorrhagic Escherichia coli. Mol Microbiol 2005, 57:1734-1749.
33. Clarke M.B., Hughes D.T., Zhu C., Boedeker E.C., Sperandio V. The QseC sensor kinase: a bacterial adrenergic receptor. Proc Natl Acad Sci USA 2006, 103:10420-10425.
34. Cloak O.M., Solow B.T., Briggs C.E., Chen C.-Y., Fratamico P.M. Quorum sensing and production of autoinducer-2 in Campylobacter spp., Escherichia coli O157:H7 and Salmonella enterica serovar Typhimurium in foods. Appl Environ Microbiol 2002, 68:4666-4671.
35. Cole S.P., Harwood J., Lee R., She R., Guiney D.G. Characterization of monospecies biofilm formation by Helicobacter pylori. J Bacteriol 2004, 186:3124-3132.
36. Cooper I.R., Taylor H.D., Hanlon G.W. Virulence traits associated with verocytotoxigenic Escherichia coli O157 recovered from freshwater films. J Appl Microbiol 2007, 102:1293-1299.
37. Coticchia JM., Sugawa C., Tran V.R., Gurrola J., Kalwalski E., Carron M.A. Presence and density of Helicobacter pylori biofilms in human gastric mucosa in patients with peptic ulcer disease. J Gastrointest Surg 2006, 10:883-889.
38. Coulthurst S.J., Kurz C.L., Salmond G.P.C. luxS mutants of Serratia defective in autoinducer-2-dependent 'quorum sensing' show strain-dependent impacts on virulence and production of carbapenem and prodigiosin. Microbiology 2004, 150:1901-1910.
39. Coulthurst S.J., Williamson N.R., Harris A.K.P., Spring D.R., Salmond G.P.C. Metabolic and regulatory engineering of Serratia marcescens: mimicking phage-mediated horizontal acquisition of antibiotic biosynthesis and quorum-sensing capacities. Microbiology 2006, 152:1899-1911.
40. Crampton S.E., Gerke C., Schnell N.F., Nichols W.W., Götz F. The intracellular adhesion (ica) locus is present in Staphylococcus aureus and is required for biofilm formation. Infect Immun 1999, 67:5427-5433.
41. Dahlberg C., BergstrÖM M., Hermansson M. In situ detection of high levels of horizontal plasmid transfer in marine bacterial communities. Appl Environ Microbiol 1998, 64:2670-2675.
42. Danese P.N., Pratt L.A., Dove S.L., Kolter R. The outer membrane protein, Antigen 43, mediates cell-to-cell interactions within Escherichia coli biofilms. Mol Microbiol 2000, 37:424-432.
43. Danese P.N., Pratt L.A., Kolter R. Exopolysaccharide production is required for development of Escherichia coli K-12 biofilm architecture. J Bacteriol 2000, 182:3593-3596.
44. Daniels R., Vanderleyden J., Michiels J. Quorum sensing and swarming migration in bacteria. FEMS Microbiol Revs 2004, 28:261-289.
45. Darwin K.H., Miller V.L. InvF is required for expression of genes encoding proteins secreted by the SPI1 type III secretion apparatus in Salmonella typhimurium. J Bacteriol 1999, 181:4949-4954.
46. Davey M.E., O'Toole G.A. Microbial biofilms: from ecology to molecular genetics. Microbiol Mol Biol Rev 2000, 64:847-867.
47. Davies D.G., Parsek M.R., Pearson JP., Iglewski B.H., Costerton J.W., Greenberg E.P. The involvement of cell-to-cell signals in the development of a bacterial biofilm. Science 1998, 280:295-298.
48. Day W.A., Maurelli A.T. Shigella flexneri LuxS quorum-sensing system modulates virB expression but is not essential for virulence. Infect Immun 2001, 69:15-23.
49. Defoirdt T., Bossier P., Sorgeloos P., Verstraete W. The impact of mutations in the quorum sensing systems of Aeromonas hydrophila, Vibrio anguillarum and Vibrio harveyi on their virulence towards gnotobiotically cultured Artemia franciscana. Environ Microbiol 2005, 7:1239-1247.
50. Defoirdt T., Crab R., Woods T.K., Sorgeloos P., Verstraete W., Bossier P. Quorum sensing-disrupting brominated furanones protect the gnotobiotic brine shrimp Artemia franciscana from pathogenic Vibrio harveyi, Vibrio campbellii and Vibrio parahaemolyticus isolates. Appl Environ Microbiol 2006, 72:6419-6423.
51. De Keersmaeacker S.C.J., Varszegi C., Van Boxel N., Habel L.W., Metzger K.R., Daniels R., Marchal K., De Vos D., Vanderlelyden J. Chemical synthesis of (S)-4,5-dihydroxy-2,3-pentanedione, a bacterial signal molecule precursor, and validation of its activity in Salmonella typhimurium. J Biol Chem 2005, 280:19563-19568.
52. De Nys R., Wright A.D., KÖNig G.M., Sticher O. New halogenated furanones from the marine alga Delisea pulchra (cf. fimbriata). Tetrahedron 1993, 49:11213-11220.
53. Doherty N., Holden M.T.G., Qazi S.N., Williams P., Winzer K. Functional analysis of luxS in Staphylococcus aureus reveals a role in metabolism but not quorum sensing. J Bacteriol 2006, 188:2885-2897.
54. Domka J., Lee J., Wood T.K. YlliH (BssR) and YceP (BssS) regulate Escherichia coli K-12 biofilm formation by influencing cell signaling. Appl Environ Microbiol 2006, 72:2449-2459.
55. Dong Y.-H., Zhang L.-H. Quorum sensing and quorum-quenching enzymes. J Microbiol 2005, 43:101-109.
56. Dong Y.-H., Wang L.-H., Xu J.-L., Zhang H.-B., Zhang X.-F., Zhang L.H. Quenching quorum-sensing-dependent bacterial infection by an N-acyl homo-serine lactonase. Nature 2001, 411:813-817.
57. Donlan R.M. Biofilms: microbial life on surfaces. Emerg Infect Dis 2002, 8:881-890.
58. Dykes G.A., Sampathkumar B., Korber D.R. Planktonic or biofilm growth affects survival, hydrophobicity and protein expression patterns of a pathogenic Campylobacter jejuni strain. Int J Food Microbiol 2003, 89:1-10.
59. Eberl L., Winson M.K., Sternberg C., Stewart G.S.A.B., Christiansen G., Chhabra S.R., Bycroft B., Williams P., Molin S., Givskov M. Involvement of N-acyl-L-homoserine lactone autoinducers in controlling the multicellular behavior of Serratia liquefaciens. Mol Microbiol 1996, 20:127-136.
60. Ekkelenkamp M.B., Van Der Bruggen T., Van De Vijver D.A., Wolfs T.F., Bonten M.J. Bacteremic complications of intravascular catheters colonized with Staphylococcus aureus. Clin Infect Dis 2008, 46:114-118.
61. Elvers K.T., Park S.F. Quorum sensing in Campylobacter jejuni: detection of a luxS encoded signaling molecule. Microbiology 2002, 148:1475-1481.
62. Enos-Berlage J.L., Guvener Z.T., Keenan C.E., Mccarter L.L. Genetic determinants of biofilm development of opaque and translucent Vibrio parahaemolyticus. Mol Microbiol 2005, 55:1160-1182.
63. Ermolaeva S., Novella S., Vega Y., Riplo M.-T., Scortii M., VA'Zquez-Boland J.A. Negative control of Listeria monocytogenes virulence genes by a diffusible autorepressor. Mol Microbiol 2004, 52:601-611.
64. Faille C., Jullien C., Fontaine F., Bellon-Fontaine M.-N., Slomianny C., Benezech T. Adhesion of Bacillus spores amd Escherichia coli cells to inert surfaces: role of surface hydrophrobicity. Can J Microbiol 2002, 48:728-738.
65. Farmer J.J.M., Arduino J., Hickman-Brenner F.W. The genera Aeromonas and Plesiomonas. The Prokaryotes 1991, vol. III:3012-3045. Springer-Verlag New York, Inc. 2nd Ed.
66. FerriÈRes L., Hancock V., Klemm P. Specific selection for virulent urinary tract infectious Escherichia coli strains during catheter-associated biofilm formation. FEMS Immunol Med Microbiol 2007, 51:212-219.
67. Finkelstein R.A., Boesman-Finkelstein M., Chang Y., Häse C.C. Vibrio cholerae hemagglutinin/protease, colonial variation, virulence, and detachment. Infect Immun 1992, 60:472-478.
68. Flodgaard L.R., Christensen A.B., Molin S., Givskov M., Gram L. Influence of food preservation parameters and associated microbiota on production rate, profile and stability of acylated homoserine lactones from food-derived Enterobacteriaceae. Int J Food Microbiol 2003, 84:145-156.
69. Fong J.C.N., Yildiz F.H. the rbmBCDEF gene cluster modulates development of rugose colony morphology and biofilm formation in Vibrio cholerae. J Bacteriol 2007, 189:2319-2330.
70. Fong J.C.N., Karplus K., Schoolnik G.K., Yildiz F.H. Identification and characterization of RbmA, a novel protein required for the development of rugose colony morphology and biofilm structure in Vibrio cholerae. J Bacteriol 2006, 188:1049-1059.
71. Forsyth M.H., Cover T.L. Intracellular communication in Helicobacter pylori: luxS is essential for the production of an extracellular signaling molelcule. Infect Immun 2000, 68:3193-3199.
72. Frees D., Chastanet A., Qazi S., Sørensen K., Hill P., Msadek T., Ingmer H. Clp ATPases are required for stress tolerance, intracellular replication and biofilm formation in Staphylococcus aureus. Mol Microbiol 2004, 54:1445-1462.
73. 2-DPD, the bis-(O)-acetylated derivative of 4,5-dihydroxy-2,3-pentanedione (DPD) is a convenient stable precursor of bacterial quorum sensing autoinducer AI-2. Biorg Med Chem Lett 2007, 17:1428-1431.
74. Fux C.A., Costerton J.W., Stewart P.S., Stoodley P. Survival strategies of infectious biofilms. Trends Microbiol 2005, 13:34-40.
75. Gavin R., Rabaan A.A., Merino S., TomA'S J.M., Gryllos I., Shaw J.G. Lateral flagella of Aeromonas species are essential for epithelial cell adherence and biofilm formation. Mol Microbiol 2002, 43:383-397.
76. Ghigo J.-M. Are there biofilm-specific physiological pathways beyond a reasonable doubt?. Res Microbiol 2003, 154:1-8.
77. Giaouris E.D., Nychas G.-J.E. The adherence of Salmonella Enteritidis PT4 to stainless steel: the importance of the air-liquid interface and nutrient availability. Food Microbiol 2006, 23:747-752.
78. Girennavar B., Cepeda M.L., Soni K.A., Vikram A., Jesudhasan P., Jayaprakasha G.K., Pillai S.D., Patil B.S. Grapefruit juice and its furocoumarins inhibits autoinducer signaling and biofilm formation in bacteria. Int J Food Microbiol 2008, 125:204-208.
79. Givskov M., De Nys R., Manefield M., Gram L., Maximilien R., Eberl E., Molin S., Steinberg P.D., Kjelleberg S. Eukaryotic interference with homoserine lactone-mediated prokaryotic signaling. J Bacteriol 1996, 178:6618-6622.
80. Givskov M., ÖStling J., Eberl L., Lindum P.W., Christensen A.B., Christiansen G., Molin S., Kjelleberg S. Two separate regulatory systems participate in control of swarming motility of Serratia liquefacians MG1. J Bacteriol 1998, 180:742-745.
81. Goerke C., Fluckiger U., Steinhuber A., Zimmerli W., Wolz C. Impact of the regulatory loci agr, sarA amd sae of Staphylococcus aureus on the induction of α-toxin during device-related infection resolved by direct quantitative transcript analysis. Mol Microbiol 2001, 40:1439-1447.
82. GonzA'Lez Barrios A.F., Zuo R., Ren D., Wood T.K. Hha, YbaJ and OmpA regulate E. coli K12 biofilm formation and conjugation plasmids abolish motility. Biotechnol Bioeng 2005, 93:188-200.
83. GonzA'Lez Barrios A.F., Zuo R., Hashimoto Y., Yang L., Bentleyh W.E., Wood T.K. Autoinducer 2 controls biofilm formation in E. coli through a novel motility quorum-sensing regulator (MqsR, B3022). J Bacteriol 2006, 188:305-316.
84. Götz F. Staphylococcus and biofilms. Mol Microbiol 2002, 43:1367-1378.
85. Greco C., Martincic I., Gusinjac A., Kalab M., Yang A.-F., RamÍRez-Arcos S. Staphylococcus epidermidis forms biofilms under simulated platelet storage conditions. Transfusion 2007, 47:1143-1153.
86. Grinholc M., Wegrzyn G., Kurlenda J. Evaluation of biofilm production and prevalence of the icaD gene in methicillin-resistant and methicillin-susceptible Stapylococcus aureus strains isolated from patients with nosocomial infections and carriers. FEMS Immunol Med Microbiol 2007, 5:375-379.
87. Gross M., Cramton S.E., Götz F., Peschel A. Key role of teichoic acid net charge in Staphylococcus aureus colonization of artificial surfaces. Infect Immun 2001, 69:3423-3426.
88. GÜVener A.T., Mccarter L.L. Multiple regulators control capsular polysaccharide production in Vibrio parahaemolyticus. J Bacteriol 2003, 185:5431-5441.
89. Hammer B.K., Bassler B.L. Quorum sensing controls biofilm formation in Vibrio cholerae. Mol Microbiol 2003, 50:101-114.
90. Hammer B.K., Bassler B.L. Regulatory small RNAs circumvent the conventional quorum sensing pathway in pandemic Vibrio cholerae. Proc Natl Acad Sci USA 2007, 104:11145-11149.
91. Hancock V., Klemm P. Global gene expression profiling of asymptomatic bacteriuria Escherichia coli during biofilm growth in human urine. Infect Immun 2007, 75:966-976.
92. Hardie K.R., Cooksley C., Green A.D., Winzer K. Autoinducer 2 activity in Escherichia coli culture supernatants can be actively reduced despite maintenance of an active synthase, LuxS. Microbiology 2003, 149:715-728.
93. Hardie K.R., Heurlier K. Establishing bacterial communities by 'word of mouth': LuxS and autoinducer 2 in biofilm development. Nat Rev Microbiol 2008, 6:635-648.
94. Harshey R.M. Bacterial motility on a surface: many ways to a common goal. Annu Rev Microbiol 2003, 57:249-273.
95. He Y., Frye J.G., Strobaugh T.P., Chen C.-Y. Analysis of AI-2/LuxS-dependent transcription in Campylobacter jejuni strain 81-176. Foodborne Pathog Dis 2008, 5:399-415.
96. Hefford M.A., D'Aoust S., Cyr T.D., Austin J.W., Sanders G., Kheradpir E., Kalmokoff M.L. Proteomic and microscopic analysis of biofilms formed by Listeria monocytogenes 568. Can J Microbiol 2005, 51:197-208.
97. Heilmann C., Schweitzer O., Gerke C., Vanittanakom N., Mack D., Götz F. Molecular basis of intercellar adhesion in the biofilm-forming Staphylococcus epidermidis. Mol Micrrobiol 1996, 20:1083-1091.
98. Hendrickx L., Hausner M., Wuertz S. Natural genetic transformation in monoculture Acinetobacter sp. strain BD413 biofilms. Appl Environ Microbiol 2003, 69:1721-1727.
99. Henke J.M., Bassler B.L. Quorum sensing regulates type III secretion in Vibrio harveyi and Vibrio parahaemolyticus. J Bacteriol 2004, 186:3794-3805.
100. Hentzer M., Riedel K., Rasmussen T.B., Heydorn A., Andersen J.B., Parsek M.R., Rice S.A., Ebert L., Molin S., HøIby N., Kjelleberg S., Givskov M. Inhibition of quorum sensing in Pseudomonas aeruginosa biofilm bacteria by a halogenated furanone compound. Microbiology 2002, 148:87-102.
101. Hernaiz C., Picardo A., Alos J.I., Gomez-Garces J.L. Nosocomial bacteremia and catheter infection by Bacillus cereus in an immunocompetent patient. Clin Microbial Infect 2003, 9:973-975.
102. Herzberg M., Kaye I.K., Peti W., Wood T.K. YdgG (TqsA) controls biofilm formation in Escherichia coli K-12 through autoinducer 2 transport. J Bacteriol 2006, 188:587-598.
103. Higgins D.A., Pomianek M.E., Kraml C.M., Taylor R.K., Semmelhack M.F., Bassler B.L. The major Vibrio cholerae autoinducer and its role in virulence factor production. Nature 2007, 450:883-886.
104. Hoffman L.R., D'Argenio D.A., Maccoss M.J., Zhang Z., Jones R.A., Miller S.I. Aminoglycoside antibiotics induce bacterial biofilm formation. Nature 2005, 436:1171-1175.
105. Hsueh Y.-H., Somers E.B., Lereclus D., Wong A.C.L. Biofilm formation by Bacillus cereus is influence by PlcR, a pleiotropic regulator. Appl Environ Microbiol 2006, 72:5089-5092.
106. Hughes D.T., Sperandio V. Inter-kingdom signaling: communication between bacteria and their hosts. Nat Rev Microbiol 2008, 6:111-120.
107. Hung D.T., Zhu J., Sturtevant D., Mekalanos J.J. Bile acids stimulate biofilm formation in Vibrio cholerae. Mol Microbiol 2006, 59:193-201.
108. Islam M.S., Jahid M.I.K., Rahman M.M., Rahman M.Z., Islam M.S., Kabir M.S., Sack D.A., Schoolnhik G.K. Biofilm acts as a microenvironment for plankton-associated Vibrio cholerae in the aquatic environment of Bangladesh. Microbiol Immunol 2007, 51:369-379.
109. Iversen C., Lane M., Forsythe S.J. The growth profile, thermotolerance and biofilm formation of Enterobacter sakazakii grown in infant formula milk. Lett Appl Microbiol 2004, 38:378-382.
110. Jackson D.W., Suzuki K., Oakford L., Simecka J.W., Hart M.E., Romeo T. Biofilm formation and dispersal under the influence of the global regulator CsrA of Escherichia coli. J Bacteriol 2002, 184:290-301.
111. Jacques S., Mccarter L.L. Three new regulators of swarming in Vibrio parahaemolyticus. J Bacteriol 2006, 188:2625-2635.
112. James G.A., Swogger E., Wolcott R., Pulcini E., Secor P., Sestrich J., Costerton J.W., Stewart P.S. Biofilmls in chronic wounds. Wound Repair Regen 2008, 16:37-44.
113. Jarrett C.O., Deak E., Isherwood K.E., Oyston P.C., Fisher E.R., Whitney A.R., Kobayashi S.D., Deleo F.R., Hinnebusch B.J. Transmission of Yersinia pestis from an infectious biofilm in the flea vector. J Infect Dis 2004, 190:783-792.
114. Jefferson K.J. What drives bacteria to produce a biofilm?. FEMS Microbiol Lett 2004, 236:163-173.
115. Jeon B., Itoh K., Misawa N., Ryu S. Effect of quorum sensing on flaA transcription and autoagglutination in Campylobacter jejuni. Microbiol Immunol 2003, 47:833-839.
116. Jeon B., Itoh K., Ryu S. Promoter analysis of cytolethal distending toxin genes (cdtA, B and C) and effect of a luxS mutation on CDT production in Campylobacter jejuni. Microbiol Immunol 2005, 49:599-603.
117. Joelsson A., Liu Z., Zhu J. Genetic and phenotypic diversity of quorum-sensing systems in clinical and environmental isolates of Vibrio cholerae. Infect Immun 2006, 74:1141-1147.
118. Joelsson A., Kan B., Zhu J. Quorum sensing enhances the stress response in Vibrio cholerae. Appl Environ Microbiol 2007, 73:3742-3746.
119. Jones G.L., Muller C.T., O'Reilly M., Stickler D.J. Effect of triclosan on the development of bacterial biofilms by urinary tract pathogens on urinary catheters. J Antimicrob Chemotherap 2006, 57:266-272.
120. Joseph L.A., Wright A.C. Expression of Vibrio vulnificus polysaccharide inhibits biofilm formation. J Bacteriol 2004, 186:889-893.
121. Joshua G.W.P., Karlyshev A.V., Smith M.P., Isherwood K.E., Titball R.W., Wren B.W. A Caenorhabditis elegans model of Yersinia infection: biofilm formation on a biotic surface. Microbiology 2003, 149:3221-3229.
122. Joshua G.W.P., Guthrie-Irons C., Karlyshev A.V., Wren B.W. Biofilm formation in Campylobacter jejuni. Microbiology 2006, 152:387-396.
123. Joyce E.A., Bassler B.L., Wright A. Evidence for a signaling system in Helicobacter pylori: detection a a luxS-encoded autoinducer. J Bacteriol 2000, 182:3638-3643.
124. Kalmokoff M., Lanthier P., Tremblay T.-L., Foss M., Lau P.C., Sanders G., Austin J., Kelly J., Szymanski C.M. Proteomic analysis of Campylobacter jejuni 11168 biofilms reveals a role for the motility complex in biofilm formation. J Bacteriol 2006, 188:4312-4320.
125. Kanamaru K., Kanamaru K., Tatsuno I., Tobe T., Sasakawa C. SdiA, an Escherichia coli homologue of quorum sensing regulators, controls the expression of virulence factors in enterohaemorrhagic Escherichia coli O157:H7. Mol Microbiol 2000, 38:805-816.
126. Karavolos M.H., Bulmer D.M., Winzer K., Wilson M., Mastroeni P., Williams P., Khan C.M.A. LuxS affects flagellar phase variation independently of quorum sensing in Salmonella enterica sv. Typhimurium. J Bacteriol 2008, 190:769-771.
127. Kendall M.M., Rasko D.A., Splerandio V. Global effects of the cell-to-cell signaling molecules autoinducer-2, autoinducer-3, and epinephrine in a luxS mutant of enterohemorrhagic Escherichia coli. Infect Immun 2007, 75:4875-4884.
128. Kikuchi T., Mizunoe Y., Takade A., Naito S., Yoshida S. Curli fibers are required for development of biofilm architecture in Escherichia coli K-12 and enhance bacterial adherence to human uroepithelial cells. Microbiol Immunol 2005, 49:875-884.
129. Kim H., Ryu J.-H., Beuchat L.R. Attachment of and biofilm formation by Enterobacter sakazakii on stainless steel and enteral feeding tubes. Appl Environ Microbiol 2006, 72:5846-5856.
130. Kim H., Ryu J.-H., Beuchat L.R. Effectiveness of disinfectants in killing Enterobacter sakazakii in suspension, dried on the surface of stainless steel, and in a biofilm. Appl Environ Microbiol 2007, 73:1256-1265.
131. Kim S.-H., Wei C.-I. Biofilm formation by multidrug-resistant Salmonella enterica serotype Typhimurium phage type DT104 and other pathogens. J Food Prot 2007, 70:22-29.
132. Kim S.Y., Lee S.E., Kim Y.R., Kim C.M., Ryu P.Y., Choy H.E., Chung S.S., Rhee J.H. Regulation of Vibrio vulnificus virulence by the LuxS quorum-sensing system. Mol Microbiol 2003, 48:1647-1664.
133. Kim W., Surette M.G. Coordinated regulation of two independent cell-cell signaling systems and swarmer differentiation in Salmonella enterica serovar Typhimurium. J Bacteriol 2006, 188:431-440.
134. Kirillina O., Fetherston J.D., Bobrov A.G., Abney J., Perry R.D. HmsP, a putative phosphodiesterase, and HmsT, a putative diguanylate cyclase, control Hms-dependent biofilm formation in Yersinia pestis. Mol Microbiol 2004, 54:75-88.
135. Kirke D.F., Swift S., Lynch M.J., Williams P. The Aeromonas hydrophila LuxR homologue AhyR regulates the N-acyl homoserine lactone synthase, AhyI positively and negatively in a growth phase-dependent manner. Microbiol Lett 2004, 241:109-117.
136. Kirwan J.P., Gould T.A., Schweizer H.P., Bearden S.W., Murphy R.C., Churchill M.E.A. Quorum-sensing signal synthesis by the Yersinia pestis acyl-homoserine lactone synthase YspI. J Bacteriol 2006, 188:784-788.
137. Koch A., Arvand M. Recurrent bacteraemia by 2 different Bacillus cereus strains related to 2 different central venous catheters. Scand J Infect Dis 2005, 37:772-774.
138. Koh K.S., Lam K.W., Alhede M., Queck S.Y., Labbate M., Kjelleberg S., Rice S.A. Phenotypic diversification and adaptation of Serratia marcescens MG1 biofilm-derived morphotypes. J Bacteriol 2007, 189:119-130.
139. Kong K.-F., Vuong C., Otto M. Staphylococcus quorum sensing in biofilm formation and infection. Int J Med Microbiol 2006, 296:133-139.
140. Kreske A.C., Ryu J.-H., Pettigrew C.A., Beuchat L.R. Lethality of chlorine, chlorine dioxide and a commercial produce sanitizer to Bacillus cereus and Pseudomonas in a liquid detergent, on stainless steel, and in biofilm. J Food Prot. 2006, 69:2621-2634.
141. Labbate M., Queck S.Y., Koh K.S., Rice S.A., Givskov M., Kjelleberg S. Quorum sensing-controlled biofilm development in Serratia marcescens MG1. J Bacteriol 2004, 186:692-698.
142. Labbate M., Zhu H., Thung L., Bandara R., Larsen M.R., Willcox M.D.P., Givskov M., Rice S.A., Kjelleberg S. Quorum-sensing regulation of adhesion in Serratia marcescens MG1 is surface dependent. J Bacteriol 2007, 189:2702-2711.
143. Latasa C., Roux A., Toledo-Arana A., Ghigo J.-M., Gamazo C., Penade's J.R., Lasa I. BapA, a large secreted protein required for biofilm formation and host colonization of Salmonella enterica serovar Enteritidis. Mol Microbiol 2005, 58:1322-1339.
144. Lebaron P., Baude P., Lett M.C., Duval-Iflah Y., Simonet P., Jacq E., Frank N., Roux B., Baleux B., Faurie G., Hubert J.C., Normand P., Prieur D., Schmidt S., Block J. Recombinant plasmid mobilization between E. coli strains in seven sterile microcosms. Can J Microbiol 1997, 43:534-540.
145. Lebert I., Leroy S., Talon R. Effect of industrial and natural biocides on spoilage, pathogenic and technological strains grown in biofilm. Food Microbiol 2007, 24:281-287.
146. Ledeboer N.A., Frye J.G., Mcclelland M., Jones B.D. Salmonella enterica serovar Typhimurium requires the lpf, pef, and tafi fimbriae for biofilm formation on HEp-2 tissue culture cells and chicken intestinal epithelium. Infect Immun 2006, 74:3156-3169.
147. Lee A.S.Y., Song K.P. LuxS/autoinducer-2 quorum sensing molecule regulates transcriptional virulence gene expression in Clostridium difficile. Biochem Biophys Res Comm 2005, 335:659-666.
148. Lee J., Bansal T., Jayaraman A., Bently W.E., Wood T.K. Enterohemorrhagic Escherichia coli biofilms are inhibited by 7-hydroxyindole and stimulated by isatin. Appl Environ Microbiol 2007, 73:4100-4109.
149. Lee J., Jayaraman A., Wood T.K. Indole is an inter-species biofilm signal mediated by SdiA. BMC Microbiol 2007, 7:42.
150. Lee J.-H., Rho J.B., Park K.-J., Kim C.B., Han Y.-S., Choi S.H., Lee K.-H., Park S.-J. Role of flagellum and motility in pathogenesis of Vibrio vulnificus. Infect Immun 2004, 72:4905-4910.
151. Lehner A., Riedel K., Eberl L., Breeuwer P., Diep B., Stephan R. Biofilm formation, Extracellular polysaccharide production, and cell-to-cell signaling in various Enterobacter sakazakii strains: aspects promoting environmental persistence. J Food Prot 2005, 68:2287-2294.
152. Lemon K., Higgins D.E., Kolter R. Flagellar motility is critical for Listeria monocytogenes biofilm formation. J Bacteriol 2007, 189:4418-4424.
153. Lenz D.H., Bassler B.L. The small nucleoid protein Fis is involved in Vibrio cholerae quorum sensing. Mol Microbiol 2007, 63:859-871.
154. Leung J.W., Liu Y., Chan R.C.Y., Tang Y., Mina Y., Cheng A.F., Silva J. Early attachment of anaerobic bacteria may play an important role in biliary stent blockage. Gastrointest Endosc 2000, 52:725-729.
155. Li M., Villaruz A.E., Vadyvaloo V., Sturdevant D.E., Otto M. AI-2-dependent gene regulation in Stapylococcus epidermidis. BMC Microbiol 2008, 8:4.
156. Li Y.-H., Lau P.C.Y., Lee J.H., Ellen R.P., Cvitkovitch D.G. Natural genetic transformation of Streptococcus mutans growing in biofilms. J Bacteriol 2001, 183:897-908.
157. Licht T.R., Christenhsen B.B., Krogfelt K.A., Molin S. Plasmid transfer in the animal intestine and other dynamic bacterial populations: the role of community structure and environment. Microbiology 1999, 145:2615-2622.
158. Lin W., Kovacikova G., Skorupski K. The quorum sensing regulator HapR downregulates the expressiojn of the virulence gene transcription factor AphA in Vibrio cholerae by antagonizing Lrp- and VpsR-mediated activation. Mol Microbiol 2007, 64:953-967.
159. Lindsay D., BrÖZel V.S., Von Holy A. Biofilm-spore resonse in Bacillus cereus and Bacillus subtilis during nutrient limitation. J Food Prot 2006, 69:1168-1172.
160. Lindum P.W., Anthoni U., Christophersen C., Eberl L., Molin S., Givskov M. N-acyl-L-homoserine lactone autoinducers control production of an extracellular lipopeptide biosurfactant required for swarming motility of Serratia liquefaciens MG1. J Bacteriol 1998, 180:6384-6388.
161. Liu D., Thomas P.W., Momb J., Hoang Q.Q., Petsko G.A., Ringe D., Fast W. Structure and specificity of a quorum-quenching lactonase (AiiB) from Agrobacterium tumefaciens. Biochemistry 2007, 46:11789-11799.
162. Loh J.T., Forsyth M.H., Cover T.L. Growth phase regulation of flaA expression in Helicobacter pylori is luxS dependent. Infect Immun 2004, 72:5506-5510.
163. Lostroh C.P., Lee C.A. The Salmonella pathogenicity isaland-1 type III secretion system. Microb Infect 2001, 3:1281-1291.
164. Lynch M.J., Swift S., Kirke D.F., Keevil G.W., Dodd C.E.R., Williams P. The regulation of biofilm development by quorum sensing in Aeromonas hydrophila. Environ Microbiol 2002, 4:18-28.
165. Maeda S., Ito M., Ando T., Ishimoto Y., Fujisawa Y., Takahashi H., Matsuda A., Sawamura A., Kato S. Horizontal transfer of nonconjugative plasmids in a colony biofilm of Escherichia coli. FEMS Microbiol Lett 2006, 255:115-120.
166. Malcova M., Hradecka H., Karpiskova R., Rychlik I. Biofilm formation in field strains of Salmonella enterica serovar Typhimurium: identification of a new colony morphology type and the role of SGI1 in biofilm formation. Vet Microbiol 2008, 129:360-364.
167. Manefield M., Rasmussen T.B., Henzter M., Andersen J.B., Steinberg P., Kjellberg S., Givskov M. Halogenated furanones inhibit quorum sensing through accelerated LuxR turnover. Microbiology 2002, 148:1119-1127.
168. Marco-Noales E., Mila'n M., Fouz B., Sanjua'n E., Amaro C. Transmission to eels, portals of entry, and putative reservoirs of Vibrio vulnificus serovar E (biotype 2). Appl Environ Microbiol 2001, 67:4717-4725.
169. Martin C.A., Hoven A.D., Cook A.M. Therapeutic frontiers: preventing and treating infectious diseases by inhibiting bacterial quorum sensing. Eur J Clin Microbiol Infect Dis 2008, 27:635-642.
170. Matz C., Mcdougald D., Moreno A.M., Yung P.Y., Yildiz F.H., Kjelleberg S. Biofilm formation and phenotypic variation enhance predation-driven persistence of Vibrio cholerae. Proc Natl Acad Sci USA 2005, 102:16819-16824.
171. Mccarter L.L. OpaR, a homolog of Vibrio harveyi LuxR, controls opacity of Vibrio parahaemolyticus. J Bacteriol 1998, 180:3166-3173.
172. Mcdougald D., Rice S.A., Kjelleberg S. SmcR-dependent regulation of adaptive phenotypes in Vibrio vulnificus. J Bacteriol 2001, 183:758-762.
173. Mcdougald D., Lin W.H., Rice S.A., Kjelleberg S. The role of quorum sensing and the effect of environmental conditions on biofilm formation by strains of Vibrio vulnificus. Biofouling 2006, 22:133-144.
174. Mcdougald D., Rice S.A., Kjelleberg S. Bacterial quorum sensing and interference by naturally occurring biomimics. Anal Bioanal Chem 2007, 387:445-453.
175. Medellin-Peña M.J., Wang H., Johnson R., Anand S., Griffiths M.W. Probiotics affect virulence-related gene expression of Escherichia coli. Appl Environ Microbiol 2007, 73:4259-4267.
176. Medina-Marti'nez M.S., Uyttendaele M., Meireman S., Debevere J. Relevance of N-acyl-L-homoserine lactone production by Yersinia enterocolitica in fresh foods. J Appl Microbiol 2006, 102:1150-1158.
177. Medina-Marti'nez M.S., Uyttendaele M., Rajkovic A., Nadal P., Debevere J. Degradation of N-acyl-L-homoserine-lactones by Bacillus cereus in culture media and pork extract. Appl Environ Microbiol 2007, 73:2329-2332.
178. Melchior M.B., Vaarkamp H., Fink-Gremmels J. Biofilms: a role in recurrent mastitis infections?. Vet J 2006, 171:398-407.
179. Middleton B., Rodgers H.C., Ca'mara M., Knox A.J., Williams P., Hardman A. Direct detection of N-acylmonoserine lactones in cystic fibrosis sputum. FEMS Microbiol Lett 2002, 207:1-7.
180. Miller M.B., Bassler B.L. Quorum sensing in bacteria. Annu Rev Microbiol 2001, 55:165-199.
181. Miller M.B., Skorupski K., Lenz D.H., Taylor R.K., Bassler B.L. Parallel quorum sensing systems converge to regulate virulence in Vibrio cholerae. Cell 2002, 110:303-314.
182. Miller S.T., Xavier K.B., Campagna S.R., Taga M.E., Semmelhack M.F., Bassler B.L., Hughson F.M. Salmonella typhimurium recognizes a chemically distinct form of the bacterial quorum-sensing signal AI-2. Mol Cell 2004, 15:677-687.
183. Miyairi S., Tateda K., Fuse E.T., Ueda C., Saito H., Takabatake T., Ishii Y., Horikawa M., Ishiguro M., Standiford T.J., Yamaguchi K. Immunization with 3-oxododecanoyl-L-homoserine lactone-protein conjugate protects mice from lethal Pseudomonas aeruginosa lung infection. J Med Microbiol 2006, 55:1381-1387.
184. Moreira C.G., Palmer K., Whitely M., Sircili M.P., Trabulsi L.R., Castro A.F.P., Sperandio V. Bundle-forming pili and EspA are involved in biofilm formation by enteropathogenic Escherichia coli. J Bacteriol 2006, 188:3952-3961.
185. Morin D., Grasland B., Valle'E-Re'Hel K., Dufau C., Haras D. On-line high-performance liquid chromatography-mass spectrometric detection and quantification of N-acylhomoserine lactones, quorum sensing signal molecules, in the presence of biological matrices. J Chromatogr A 2003, 1002:79-92.
186. Morohoshi T., Shiono T., Takidouchi K., Kato M., Kato N., Kato J., Ikeda T. Inhibition of quorum sensing in Serratia marcescens AS-1 byh the synthetic analogs of N-acylhomoserine lactone. Appl Environ Microbiol 2007, 73:6339-6344.
187. Ngwai Y.B., Adachi Y., Ogawa YH., Hara H. Characterization of biofilm-forming abilities of antibiotic-resistant Salmonella typhimurium DT104 on hydrophobic abiotic surfaces. J Microbiol Immunol Infect 2006, 39:278-291.
188. Ni N., Chou H.-T., Wang J., Li M., Lu C.-D., Tai P.C., Wang B. Identification of boronic acids as antagonists of bacterial quorum sensing in Vibrio harveyi. Biochem Biophys Res Comm 2008, 369:590-594.
189. Niemira B.A. Irradiation sensitivity of planktonic and biofilm-associated Escherichia coli O157:H7 isolates is influenced by culture conditions. Appl Environ Microbiol 2007, 73:3239-3244.
190. Niemira B.A., Solomon E.B. Sensitivity of planktonic and biofilm-associated Salmonella spp. to ionizing radiation. Appl Environ Microbiol 2005, 71:2732-2736.
191. Nuijten P.J.M., Van Assten F.J.A.M., Gaastra W., Van Der Zeijst B.A.M. Structural and functional analysis of two Campylobacter jejuni flagellin genes. J Biol Chem 1990, 265:17798-17804.
192. Ohtani K., Hayashi H., Shimizu T. The luxS gene is involved in cell-cell signaling for toxin production in Clostridium perfringens. Mol Microbiol 2002, 44:171-179.
193. Oosthuizen M.C., Steyn B., Theron J., Cosette P., Lindsay D., Von Holy A., BrÖZel V.S. Proteomic analysis reveals differential protein expression by Bacillus cereus during biofilm formation. Appl Environ Microbiol 2002, 68:2770-2780.
194. Orme R., Douglas C.W., Rimmer S., Webb M. Proteomic analysis of Escherichia coli biofilms reveals the overexpression of the outer membrane protein OmpA. Proteomics 2006, 6:4269-4277.
195. Ortori C.A., Atkinson S., Chhabra S.R., Ca'mara M., Williams P., Barrett D.A. Comprehensive profiling of N-acylhomoserine lactones produced by Yersinia pseudotuberculosis using liquid chromatography coupled to hybrid quadrupole-linear ion trap mass spectrometry. Anal Bioanal Chem 2007, 387:497-511.
196. Osaki T., Hanawa T., Manzoku T., Fukuda M., Kawakami H., Suzuki H., Yamaaguchi H., Yan X., Taguchi H., Kurata S., Kamiya S. Mutation of luxS affects motility and infectivity of Helicobacter pylori in gastric mucosa of a Mongolian gerbil model. J Med Microbiol 2006, 55:1477-1485.
197. Otto M. Staphylococcus aureus and Staphylococcus epidermidis peptide pheromones produced by the accessory gene regulator agr system. Peptides 2001, 22:1603-1608.
198. Otto M. Quorum-sensing control in staphylococci - a target for antimicrobial drug therapy?. FEMS Microbiol Lett 2004, 241:135-141.
199. Pan Y., Breidt F., Kathariou S. Resistance of Listeria monocytogenes biofilms to sanitizing agents in a stimulated food processing environment. Appl Environ Microbiol 2006, 72:7711-7717.
200. Paranjpye R.N., Strom M.S. A Vibrio vulnificus type IV pilin contributes to biofilm formation, adherence to epithelial cells and virulence. Infect Immun 2005, 73:1411-1422.
201. Park J., Jagasia R., Kaufmann G.F., Mathison J.C., Ruiz D.I., Moss J.A., Meijler M.M., Ulevich R.J., Janda K.D. Infection control by antibody disruption of bacterial quorum sensing signaling. Chem Biol 2007, 14:1119-1127.
202. Park S.R., Mackay W.G., Reid D.C. Helicobacter sp. recovered from drinking water biofilm sampled from a water distribution system. Wat Res 2001, 35:1624-1626.
203. Patel C.N., Wortham B.W., Lines J.L., Fetherston J.D., Perry R.D., Oliveira M.A. Polyamines are essential for the formation of plague biofilm. J Bacteriol 2006, 188:2355-2363.
204. Pawar D.M., Rossman M.L., Chen J. Role of curli fimbriae in mediating the cells of enterohaemorrhagic Escherichia coli to attach to abiotic surfaces. J Appl Microbiol 2005, 99:418-425.
205. Peng J.-S., Tsai W.-C., Chou C.-C. Inactivation and removal of Bacillus cereus by sanitizer and detergent. Int J Food Microbiol 2002, 77:11-18.
206. Pe'Rez-Conesa D., Mclandsborough L., Weiss J. Inhibition and inactivation of Listeria monocytogenes and Escherichia coli O157:H7 colony biofilms by micellar-encapsulated eugenol and carvacrol. J Food Prot 2006, 69:2947-2954.
207. Prigent-Combaret C., Prensier G., Le Thi T.T., Vidal O., Lejeune P., Dorel C. Developmental pathway for biofilm formation in curli-producing Escherichia coli strains: role of flagella, curli and colonic acid. Environ Microbiol 2000, 2:450-464.
208. Prouty A.M., Schwesinger W.H., Gunn J.S. Biofilm formation and inter-action with the surfaces of gallstones by Salmonella spp. Infect Immun 2002, 70:2640-2649.
209. Qin Z., Yang S., Yang L., Jiang J., Ou Y., Molin S., Qu D. Formation and properties of in vitro biofilms of ica-negative Staphylococcus epidermidis clinical isolates. J Med Microbiol 2007, 56:83-93.
210. Rader B.A., Campagna S.R., Semmelhack M.F., Bassler B.L., Guilllemin K. The quorum sensing molecule AI-2 regulates motility and flagellar morphogenesis in Helicobacter pylori. J Bacteriol 2007, 189:6109-6117.
211. Rani S.A., Pitts B., Beyenal H., Veluchampy R.A., Lewandowski Z., Davison W.M., Buckingham-Meyer K., Stewart P.S. Spatial patterns of DNA replication, protein synthesis, and oxygen concentration within bacterial biofilms reveal diverse physiological states. J Bacteriol 2007, 189:4223-4233.
212. Rasmussen T.B., Givskov M. Quorum sensing inhibitors: a bargain of effects. Microbiology 2006, 152:895-904.
213. Reading N., Torres A.G., Kendall M., Hughes D.T., Yamamoto K., Sperandio V. A novel two-component signaling system that activates transcription of an enterohemorrhagic E. coli (EHEC) effector involved in remodeling of host actin. J Bacteriol 2007, 189:2468-2476.
214. Reeser R.J., Medler R.T., Billington S.J., Jost B.H., Joens L.A. Characterization of Campylobacter jejuni biofilms under defined growth conditions. Appl Environ Microbiol 2007, 73:1908-1913.
215. Reisner A., Haagensen J.A.J., Schembri M.A., Zechner E.L., Molin S. Development and maturation of Escherichia coli K-12 biofilms. Mol Microbiol 2003, 48:933-946.
216. Ren D., Sims J.J., Wood T.K. Inhibition of biofilm formation and swarming of Escherichia coli by (5Z)-4-bromo-5-(bromomethylene)-3-butyl-2(5H)-furanone. Environ Microbiol 2001, 3:731-736.
217. Ren D., Bedzyk L.A., Thomas S.M., Ye R.W., Wood T.K. Gene expression in Escherichia coli biofilms. Appl Microbiol Biotechnol 2004, 64:515-524.
218. Ren D., Bedzyk L.A., Ye R.W., Thomas S.M., Wood T.K. Differential gene expression shows natural brominated furanones interfere with autoinducer-2 bacterial signaling system of Escherichia coli. Biotechnol Bioeng 2004, 88:639-642.
219. Resch A., Leicht S., Saric M., PA'Sztor L., Jakob A., Götz F., Nordheim A. Comparative proteome analysis of Staphylococcus aureus biofilm and planktonic cells and correlation with transcriptome profiling. Proteomics 2006, 6:1867-1877.
220. Rice S.A., Koh K.S., Queck S.Y., Labbate M., Lam K.W., Kjelleberg S. Biofilm formation and sloughing in Serratia marcescens are controlled by quorum sensing and nutrient cues. J Bacteriol 2005, 187:3477-3485.
221. Rieu A., Weidmann S., Garmyn D., Piveteau P., Guzzo J. agr system of Listeria monocytogenes EGD-e: role in adherence and differential expression pattern. Appl Environ Microbiol 2007, 73:6125-6133.
222. Roberts A., Mullany P., Wilson M. Methods in Enzymology. Gene transfer in bacterial biofilms 2001, 60-65. Academic Press, New York. R.J. Doyle (Ed.).
223. Roberts A.P., Pratten J., Wilson M., Mullany P. Transfer of a conjugative transposon, Tn5397 in a model oral biofilm. FEMS Microbiol Lett 1999, 177:63-66.
224. Roche D.M., Byers J.T., Smith D.S., Glansdorp F.G., Spring D.R., Welch M. Communications blackout? Do N-acylhomoserinelactone-degrading enzymes have any role in quorum sensing?. Microbiology 2004, 150:2023-2028.
225. RodrÍGuez A., Mclandsborough L.A. Evaluation of the transfer of Listeria monocytogenes from stainless steel and high-density polyethylene to bologna and American cheese. J Food Prot 2007, 70:600-606.
226. RodrÍGuez A., Autio W.R., Mclandsborough L.A. Effect of biofilm dryness on the transfer of Listeria monocytogenes biofilms grown on stainless steel to bologna and hard salami. J Food Prot 2007, 70:2480-2484.
227. Russell R.M., Sharp F.C., Rasko D.A., Sperandio V. QseA and GrflR/GrlA regulation of the locus of enterocyte effacement genes in enterohemorrhagic Escherichia coli. J Bacteriol 2007, 189:5387-5392.
228. Ryu J.-H., Kim H., Frank J.F., Beuchat L.R. Attachment and biofilm formation on stainless steel by Escherichia coli O157 : H7 as affected by curli production. Lett Appl Microbiol 2004, 39:359-362.
229. Sanders S.Q., Boothe D.H., Frank J.F., Arnold J.W. Culture and detection of Campylobacter jejuni within mixed microbial populations of biofilms on stainless steel. J Food Prot 2007, 70:1379-1385.
230. Sauer K. The genomics and proteomics of biofilm formation. Genome Biol 2003, 4:219.
231. Scher K., Romling U., Yaron S. Effect of heat, acidification, and chlorination on Salmonella enterica serovar Typhimurium cells in a biofilm formed at the air-liquid interface. Appl Environ Microbiol 2005, 71:1163-1168.
232. Sela S., Frank S., Belausov E., Pinto R. A mutation in the luxS gene influences Listeria monocytogenes biofilm formation. Appl Environ Microbiol 2006, 72:5653-5658.
233. Shao C.-P., Hor L.-I. Regulation of metalloprotease gene expression in Vibrio vulnificus by a Vibrio harveyi LuxR homologue. J Bacteriol 2001, 183:1369-1375.
234. Sharp F.C., Sperandio V. QseA directly activates transcription of LEE1 in enterohemorrhagic Escherichia coli. Infect Immun 2007, 75:2432-2440.
235. Sherlock O., Schembri M.A., Reisner A., Klemm P. Novel roles for the AIDA adhesion from diarrheagenic Escherichia coli: cell aggregration and biofilm formation. J Bacteriol 2004, 186:8058-8065.
236. Sherlock O., Vejborg R.M., Klemm P. The TibA adhesin/invasin from enterotoxigenic Escherichia coli is self recognizing and induces bacterial aggregation and biofilm formation. Infect Immun 2005, 73:1954-1963.
237. Shime-Hatori A., Iida T., Arita M., Park K.-S., Kodama T., Honda T. Two type IV pili of Vibrio parahaemolyticus play different roles in biofilm formation. FEMS Microbiol Lett 2006, 264:89-97.
238. Sircili M.P., Walters M., Trabulsi L.R., Sperandio V. Modulation of enteropathogenic Escherichia coli virulence by quorum sensing. Infect Immun 2004, 72:2329-2337.
239. Slamti L., Lereclus D. A cell-cell signaling peptide activates the PlcR virulence regulon in bacteria of the Bacillus cereus group. EMBO J 2002, 21:4550-4559.
240. Slamti L., Lereclus D. Specificity and polymorphism of the PlcR-PapR quorum- sensing system in the Bacillus cereus group. J Bacteriol 2005, 187:1182-1187.
241. Smith J.L., Fratamico P.M., Novak J.S. Quorum sensing: a primer for food microbiologists. J Food Prot 2004, 67:1053-1070.
242. Smith J.N., Ahmer M.M. Detection of other microbial species by Salmonella: expression of the SdiA regulon. J Bacteriol 2003, 185:1357-1366.
243. Solomon E.B., Niemira B.A., Sapers G.M., Annous B.A. Biofilm formation, cellulose production, and curli biosynthesis by Salmonella originating from produce, animal and clinical sources. J Food Prot 2005, 68:906-912.
244. Sperandio V., Li C.C., Kaper J.B. Quorum-sensing Escherichia coli regulator A: a regulator of the LysR family involved in the regulation of the locus of enterocyte effacement pathogenicity island in enterohemorrhagic E. coli. Infect Immun 2002, 70:3085-3093.
245. Sperandio V., Torres A.G., Jarvis B., Nataro J.P., Kaper J.B. Bacteria-host communication: the language of hormones. Proc Natl Acad Sci USA 2003, 100:8951-8956.
246. Stafford G.P., Hughes C. Salmonella typhimurium flhE, a conserved flagellar regulon gene required for swarming. Microbiology 2007, 153:541-547.
247. Stark R.M., Gerwig G.J., Pitman R.S., Potts L.F., Williams N.A., Greenman J., Weinzweig I.P., Hirst T.R., Miller M.R. Biofilm formation by Helicobacter pylori. Lett Appl Microbiol 1999, 28:121-126.
248. Stewart P.S., Franklin M.J. Physiological heterogeneity in biofilms. Nat Rev Microbiol 2008, 6:199-210.
249. Stoodley P., Sauer K., Davies D.G., Costerton J.W. Biofilms as complex differentiated communities. Annu Rev Microbiol 2002, 56:187-209.
250. Swift S., Karlyshev A.V., Fish L., Durant E.L., Winson M.K., Chhabra S.R., Williams P., Macintyre S., Stewart G.S.A.B. Quorum sensing in Aeromonas hydrophila and Aeromonas salmonicida: identification of the LuxRI homologs AhyRI and AsaRI and their cognate N-acylhomoserine lactone signal molecules. J Bacteriol 1997, 179:5271-5281.
251. Taga M.E., Miller S.T., Bassler B.L. Lsr-mediated transport and processing of AI-2 in Salmonella typhimurium. Mol Microbiol 2003, 50:1411-1427.
252. Tamplin M.L., Gauzens A.L., Huq A., Sack D.A., Colwell R.R. Attachment of Vibrio cholerae serogroup O1 to zooplankton and phytoplankton of Bangladesh waters. Appl Environ Microbiol 1990, 56:1977-1980.
253. Tan L., Darby C. A movable surface: formation of Yersinia sp. biofilms on motile Caenorhabditis elegans. J Bacteriol 2004, 186:5087-5092.
254. Toguchi A., Siano M., Burkart M., Harshey R.M. Genetics of swarming motility in Salmonella enterica serovar Typhimurium: critical role for liposaccharide. J Bacteriol 2000, 182:6308-6321.
255. Tolvanen R., Lunde'N J., Korkeala H., Wirtanen G. Ultrasonic cleaning of conveyor belt materials using Listeria monocytogenes as a model organism. J Food Prot 2007, 70:758-761.
256. Trachoo N. Biofilms and the food industry. Songklanakarin J Sci Technol 2003, 25:807-815.
257. Trachoo N., Frank J.F. Effectiveness of chemical sanitizers against Campylobacter jejuni-containing biofilms. J Food Prot 2002, 65:1117-1121.
258. Trachoo N., Frank J.F., Stern N.J. Survival of Campylobacter jejuni in biofilms isolated from chicken houses. J Food Prot 2002, 65:1110-1116.
259. Tre'Moulet F., Duche' O., Namane A., Martinie B., Labadie J.-C. A proteomic study of Escherichia coli O157:H7 NCTC 12900 cultivated in biofilm or in planktonic growth mode. FEMS Microbiol Lett 2002, 215:7-14.
260. Uhlich G.A., Cooke P.H., Solomon E.B. Analyses of the red-dry-rough phenotype of an Escherichia coli O157:H7 strain and its role in biofilm formation and resistance to antibacterial agents. Appl Environ Microbiol 2006, 72:2564-2572.
261. Van Houdt R., Michiels C.W. Role of bacterial cell surface structures in Escherichia coli biofilm formation. Res Microbiol 2005, 156:626-633.
262. Vasudevan P., Kumar M., Nair M., Annamalai T., Venkitanarayanan K.S. Phenotypic and genotypic characterization of bovine mastitis isolates of Staphylococcus aureus for biofilm formation. Vet Microbiol 2003, 92:179-185.
263. Vendeville A., Winzer K., Heurlier K., Tang C.M., Hardie K.R. Making 'sense' of metabolism: autoinducer-2, LuxS, and pathogenic bacteria. Nat Rev Microbiol 2005, 3:383-396.
264. Vuong C., Saenz H.L., Götz F., Otto M. Impact of the agr quorum-sensing system on adherence to polystyrene in Staphylococcus aureus. J Infect Dis 2000, 182:1688-1693.
265. Vuong C., Gerke C., Somerville G.A., Fischer E.R., Otto M. Quorum-sensing control of biofilm factors in Staphylococcus epidemidis. J Infect Dis 2003, 188:706-718.
266. Vuong C., Kocianova S., Yao Y., Carmody A.B., Otto M. Increased colonization of indwelling medical devices by quorum-sensing mutants of Staphylococcus epidermidis in vivo. J Infect Dis 2004, 190:1498-1505.
267. Walters M., Sperandio V. Autoinducer 3 and epinephrine signaling in the kinetics of locus of enterocyte effacement gene expression in enterohemorrhagic Escherichia coli. Infect Immun 2006, 74:5445-5455.
268. Walters M., Sperandio V. Quorum sensing in Escherichia coli and Salmonella. Int J Med Microbiol 2006, 296:125-131.
269. Walters M., Sircili M.P., Sperandio V. AI-3 synthesis is not dependent on luxS in Escherichia coli. J Bacteriol 2006, 188:5668-5681.
270. Wang C., Li M., Dong D., Wang J., Ren J., Otto M., Gao Q. Role of ClpP in biofilm formation and virulence of Staphylococcus epidermidis. Microbes Infect 2007, 9:1376-1389.
271. Wang L., Hashimoto Y., Tsao C.-Y., Valdes J.J., Bentley W.E. Cyclic AMP (cAMP) and CAMP Receptor protein influence both synthesis and uptake of extracellular autoinducer 2 in Escherichia coli. J Bacteriol 2005, 187:2066-2076.
272. Wang Q., Mariconda S., Suzuki A., Mcclelland M., Harshey R.M. Uncovering a large set of genes that affect surface motility in Salmonella enterica serovar Typhimurium. J Bacteriol 2006, 188:7981-7984.
273. Wang X., De Boer P.A.J., Rothfield L.I. A factor that positively regulates cell division by activating transcription of the major cluster of essential cell division genes of Escherichia coli. EMBO J 1991, 10:3363-3372.
274. Waters C.M., Lu W., Rabinowitz J.D., Bassler B.L. Quorum sensing controls biofilm formation in Vibrio cholerae through modulation of cyclic di-GMP levels and repression of vpsT. J Bacteriol 2008, 190:2527-2536.
275. Watnick P., Kolter R. Biofilm, city of microbes. J Bacteriol 2000, 182:2675-2679.
276. Watson C.L., Owen R.J., Said B., Lai S., Lee J.V., Surman-Lee S., Nichols G. Detection of Helicobacter pylori by PCR but not culture in water and biofilm samples from drinking water distribution systems in England. J Appl Microbiol 2004, 97:690-698.
277. Wen Z.T., Burne R.A. Functional genomics approach to identifying genes required for biofilm development by Streptococcus mutans. Appl Environ Microbiol 2002, 68:1196-1203.
278. Wijman J.G.E., De Leeuw P.P.L.A., Moezelaar R., Zwietering M.H. Air-liquid interface biofilms of Bacillus cereus: formation, sporulation and dispersion. Appl Environ Microbiol 2007, 73:1481-1488.
279. Wu H., Song Z., Hentzer M., Andersen J.B., Molin S., Givskov M., HøIby N. Synthetic furanones inhibit quorum-sensing and enhance bacterial clearance in Pseudomonas aeruginosa lung infection in mice. J Antimicrob Chemother 2004, 53:1054-1061.
280. Xavier K.B., Bassler B.L. Regulation of uptake and processing of the quorum-sensing autoinducer AI-2 in Escherichia coli. J Bacteriol 2005, 187:238-248.
281. Xu F., Byun T., Dussen H.-J., Duke K.R. Degradation of N-acylhomoserine lactone, the bacterial quorum-sensing molecules, by acylase. J Biotechnol 2003, 101:89-96.
282. Xu L., Li H., Vuong C., Vadyvaloo A., Wang J., Yao Y., Otto M., Gao Q. Role of the luxS quorum-sensing system in biofilm formation and virulence of Staphyloccus epidemidis. Infect Immun 2006, 74:488-496.
283. Yang F., Wang L.-H., Wang J., Dong Y.-H., Hu J.Y., Zhang L.-H. Quroum quenching enzyme activity is widely conserved in the sera of mammalian species. FEBS Lett 2005, 579:3713-3717.
284. Yarwood J.M., Schlievert P.M. Quorum sensing in Staphyloccus infections. J Clin Invest 2003, 112:1620-1625.
285. Yates E.A., Phillipp B., Buckley C., Atkinson S., Chhabra S.R., Sockett R.E., Goldner M., Dessaux Y., Ca'mara M., Smith H., Williams P. N-Acylhomoserine lactones undergo lactonolysis in a pH-, temperature-, and acyl chain length-dependent manner during growth of Yersinia pseudotuberculosis and Pseudomonas aeruginosa. Infect Immun 2002, 70:5635-5646.
286. Yildiz F.H., Schoolnik G.K. Vibrio cholerae O1 El Tor: identification of a gene cluster required for the rugose colony type, exopolysaccharide production, chlorine resistance, and biofilm formation. Proc Natl Acad Sci USA 1999, 96:4028-4033.
287. Yoon Y., Sofos J.N. Autoinducer-2 activity of gram-negative foodborne pathogenic baceria and its influence on biofilm formation. J Food Sci 2008, 73:M140-M147.
288. Young G.M., Smith M.J., Minnich S.A., Miller V.L. The Yersinia enterocolitica motility master regulatory operon, flhDC, is required for flagellin production, swimming motility, and swarming motility. J Bacteriol 1999, 181:2823-2833.
289. Zhao L., Montville T.J., Schaffner D.W. Evidence for quorum sensing in Clostridium botulinum 56A. Lett Appl Microbiol 2006, 42:54-58.
290. Zhao T., Doyle M.P., Zhao P. Control of Listeria monocytogenes in a biofilm by competitive-exclusion microorganisms. Appl Environ Microbiol 2004, 70:3996-4003.
291. Zhu J., Mekalanos J.J. Quorum sensing-dependent biofilms enhance colonization in Vibrio cholerae. Develop Cell 2003, 5:647-656.
292. Zogaj X., Bokranz W., Nimtz M., RÖMling U. Production of cellulose and curli fimbriae by members of the family Enterobacteriaceae isolated from the human gastrointestinal tract. Infect Immun 2003, 71:4151-4158.