메뉴 건너뛰기




Volumn 51, Issue 15, 2012, Pages 3178-3197

Study of human orexin-1 and -2 G-protein-coupled receptors with novel and published antagonists by modeling, molecular dynamics simulations, and site-directed mutagenesis

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; BINDING AFFINITIES; CLASS A; CONFORMATIONAL DIFFERENCES; DOMAIN EXCHANGE; ENERGY METABOLISM; FLEXIBLE DOCKING; G PROTEIN COUPLED RECEPTORS; HOMOLOGY MODELING; INTERHELICAL INTERACTIONS; KEY FEATURE; MD SIMULATION; MOLECULAR DYNAMICS SIMULATIONS; PHYSIOLOGICAL FUNCTIONS; RECEPTOR MODEL; SITE DIRECTED MUTAGENESIS; SLEEP-WAKE CYCLES; STATIC MODEL; TRANSMEMBRANE HELICES;

EID: 84859906798     PISSN: 00062960     EISSN: 15204995     Source Type: Journal    
DOI: 10.1021/bi300136h     Document Type: Article
Times cited : (37)

References (140)
  • 1
    • 79959962736 scopus 로고    scopus 로고
    • Hypocretin1/OrexinA-containing axons innervate locus coeruleus neurons that project to the Rat medial prefrontal cortex. Implication in the sleep-wakefulness cycle and cortical activation
    • Del Cid-Pellitero, E. and Garzon, M. (2011) Hypocretin1/OrexinA- containing axons innervate locus coeruleus neurons that project to the Rat medial prefrontal cortex. Implication in the sleep-wakefulness cycle and cortical activation Synapse 65, 843-857
    • (2011) Synapse , vol.65 , pp. 843-857
    • Del Cid-Pellitero, E.1    Garzon, M.2
  • 2
    • 77955920536 scopus 로고    scopus 로고
    • Antagonism of orexin type 1 receptors in the locus coeruleus attenuates signs of naloxone-precipitated morphine withdrawal in rats
    • Azizi, H., Mirnajafi-Zadeh, J., Rohampour, K., and Semnanian, S. (2010) Antagonism of orexin type 1 receptors in the locus coeruleus attenuates signs of naloxone-precipitated morphine withdrawal in rats Neurosci. Lett. 482, 255-259
    • (2010) Neurosci. Lett. , vol.482 , pp. 255-259
    • Azizi, H.1    Mirnajafi-Zadeh, J.2    Rohampour, K.3    Semnanian, S.4
  • 3
    • 75749152568 scopus 로고    scopus 로고
    • Orexins/hypocretins and orexin receptors in apoptosis: A mini-review
    • Laburthe, M., Voisin, T., and El Firar, A. (2010) Orexins/hypocretins and orexin receptors in apoptosis: A mini-review Acta Physiol. Scand. 198, 393-402
    • (2010) Acta Physiol. Scand. , vol.198 , pp. 393-402
    • Laburthe, M.1    Voisin, T.2    El Firar, A.3
  • 5
    • 84859924302 scopus 로고    scopus 로고
    • Article reviewed: The novel brain neuropeptide, orexin-A, modulates the sleep-wake cycle of rats
    • Garcia-Borreguero, D. (2000) Article reviewed: The novel brain neuropeptide, orexin-A, modulates the sleep-wake cycle of rats Sleep Med. 1, 251-252
    • (2000) Sleep Med. , vol.1 , pp. 251-252
    • Garcia-Borreguero, D.1
  • 6
    • 77955114579 scopus 로고    scopus 로고
    • Orexin receptor antagonists: A new concept in CNS disorders?
    • Gatfield, J., Brisbare-Roch, C., Jenck, F., and Boss, C. (2010) Orexin receptor antagonists: A new concept in CNS disorders? ChemMedChem 5, 1197-1214
    • (2010) ChemMedChem , vol.5 , pp. 1197-1214
    • Gatfield, J.1    Brisbare-Roch, C.2    Jenck, F.3    Boss, C.4
  • 7
    • 77955844066 scopus 로고    scopus 로고
    • The comparative neuroanatomy and neurochemistry of zebrafish CNS systems of relevance to human neuropsychiatric diseases
    • Panula, P., Chen, Y. C., Priyadarshini, M., Kudo, H., Semenova, S., Sundvik, M., and Sallinen, V. (2010) The comparative neuroanatomy and neurochemistry of zebrafish CNS systems of relevance to human neuropsychiatric diseases Neurobiol. Dis. 40, 46-57
    • (2010) Neurobiol. Dis. , vol.40 , pp. 46-57
    • Panula, P.1    Chen, Y.C.2    Priyadarshini, M.3    Kudo, H.4    Semenova, S.5    Sundvik, M.6    Sallinen, V.7
  • 9
    • 21544481476 scopus 로고    scopus 로고
    • CNS neurons with links to both mood-related cortex and sympathetic nervous system
    • DOI 10.1016/j.brainres.2005.04.090, PII S000689930500689X
    • Krout, K. E., Mettenleiter, T. C., Karpitskiy, V., Nguyen, X. V., and Loewy, A. D. (2005) CNS neurons with links to both mood-related cortex and sympathetic nervous system Brain Res. 1050, 199-202 (Pubitemid 40922734)
    • (2005) Brain Research , vol.1050 , Issue.1-2 , pp. 199-202
    • Krout, K.E.1    Mettenleiter, T.C.2    Karpitskiy, V.3    Van Nguyen, X.4    Loewy, A.D.5
  • 10
    • 80052397293 scopus 로고    scopus 로고
    • Local network regulation of orexin neurons in the lateral hypothalamus
    • Burt, J., Alberto, C. O., Parsons, M. P., and Hirasawa, M. (2011) Local network regulation of orexin neurons in the lateral hypothalamus Am. J. Physiol. 301, R572-R580
    • (2011) Am. J. Physiol. , vol.301
    • Burt, J.1    Alberto, C.O.2    Parsons, M.P.3    Hirasawa, M.4
  • 11
    • 79551520642 scopus 로고    scopus 로고
    • Distribution of orexin-A immunoreactive neurons and their terminal networks in the brain of the rock hyrax, Procavia capensis
    • Gravett, N., Bhagwandin, A., Fuxe, K., and Manger, P. R. (2011) Distribution of orexin-A immunoreactive neurons and their terminal networks in the brain of the rock hyrax, Procavia capensis J. Chem. Neuroanat. 41, 86-96
    • (2011) J. Chem. Neuroanat. , vol.41 , pp. 86-96
    • Gravett, N.1    Bhagwandin, A.2    Fuxe, K.3    Manger, P.R.4
  • 12
    • 77956178240 scopus 로고    scopus 로고
    • Cellular location and major terminal networks of the orexinergic system in the brains of five microchiropteran species
    • Kruger, J. L., Dell, L. A., Pettigrew, J. D., and Manger, P. R. (2010) Cellular location and major terminal networks of the orexinergic system in the brains of five microchiropteran species J. Chem. Neuroanat. 40, 256-262
    • (2010) J. Chem. Neuroanat. , vol.40 , pp. 256-262
    • Kruger, J.L.1    Dell, L.A.2    Pettigrew, J.D.3    Manger, P.R.4
  • 13
    • 77951959293 scopus 로고    scopus 로고
    • Central chemoreception in wakefulness and sleep: Evidence for a distributed network and a role for orexin
    • Nattie, E. and Li, A. (2010) Central chemoreception in wakefulness and sleep: Evidence for a distributed network and a role for orexin J. Appl. Physiol. 108, 1417-1424
    • (2010) J. Appl. Physiol. , vol.108 , pp. 1417-1424
    • Nattie, E.1    Li, A.2
  • 14
    • 77953761665 scopus 로고    scopus 로고
    • Mapping the binding pocket of dual antagonist almorexant to human orexin 1 and orexin 2 receptors: Comparison with the selective OX1 antagonist SB-674042 and the selective OX2 antagonist N-ethyl-2-[(6-methoxy-pyridin-3-yl)-(toluene- 2-sulfonyl)-amino]-N-pyridin- 3-ylmethyl-acetamide (EMPA)
    • Malherbe, P., Roche, O., Marcuz, A., Kratzeisen, C., Wettstein, J. G., and Bissantz, C. (2010) Mapping the binding pocket of dual antagonist almorexant to human orexin 1 and orexin 2 receptors: Comparison with the selective OX1 antagonist SB-674042 and the selective OX2 antagonist N-ethyl-2-[(6-methoxy- pyridin-3-yl)-(toluene-2-sulfonyl)-amino]-N-pyridin- 3-ylmethyl-acetamide (EMPA) Mol. Pharmacol. 78, 81-93
    • (2010) Mol. Pharmacol. , vol.78 , pp. 81-93
    • Malherbe, P.1    Roche, O.2    Marcuz, A.3    Kratzeisen, C.4    Wettstein, J.G.5    Bissantz, C.6
  • 16
    • 59649114144 scopus 로고    scopus 로고
    • Neuroendocrine proopiomelanocortin neurons are excited by hypocretin/orexin
    • Acuna-Goycolea, C. and van den Pol, A. N. (2009) Neuroendocrine proopiomelanocortin neurons are excited by hypocretin/orexin J. Neurosci. 29, 1503-1513
    • (2009) J. Neurosci. , vol.29 , pp. 1503-1513
    • Acuna-Goycolea, C.1    Van Den Pol, A.N.2
  • 17
    • 77958141851 scopus 로고    scopus 로고
    • Underlying brain mechanisms that regulate sleep-wakefulness cycles
    • Gvilia, I. (2010) Underlying brain mechanisms that regulate sleep-wakefulness cycles Int. Rev. Neurobiol. 93, 1-21
    • (2010) Int. Rev. Neurobiol. , vol.93 , pp. 1-21
    • Gvilia, I.1
  • 20
    • 32344446144 scopus 로고    scopus 로고
    • Orexin a in the VTA is critical for the induction of synaptic plasticity and behavioral sensitization to cocaine
    • DOI 10.1016/j.neuron.2006.01.016, PII S0896627306000456
    • Borgland, S. L., Taha, S. A., Sarti, F., Fields, H. L., and Bonci, A. (2006) Orexin A in the VTA is critical for the induction of synaptic plasticity and behavioral sensitization to cocaine Neuron 49, 589-601 (Pubitemid 43221893)
    • (2006) Neuron , vol.49 , Issue.4 , pp. 589-601
    • Borgland, S.L.1    Taha, S.A.2    Sarti, F.3    Fields, H.L.4    Bonci, A.5
  • 21
    • 77950369884 scopus 로고    scopus 로고
    • The role of orexin-A in food motivation, reward-based feeding behavior and food-induced neuronal activation in rats
    • Choi, D. L., Davis, J. F., Fitzgerald, M. E., and Benoit, S. C. (2010) The role of orexin-A in food motivation, reward-based feeding behavior and food-induced neuronal activation in rats Neuroscience 167, 11-20
    • (2010) Neuroscience , vol.167 , pp. 11-20
    • Choi, D.L.1    Davis, J.F.2    Fitzgerald, M.E.3    Benoit, S.C.4
  • 22
    • 78649878872 scopus 로고    scopus 로고
    • Dopaminergic regulation of sleep and cataplexy in a murine model of narcolepsy
    • Burgess, C. R., Tse, G., Gillis, L., and Peever, J. H. (2010) Dopaminergic regulation of sleep and cataplexy in a murine model of narcolepsy Sleep 33, 1295-1304
    • (2010) Sleep , vol.33 , pp. 1295-1304
    • Burgess, C.R.1    Tse, G.2    Gillis, L.3    Peever, J.H.4
  • 24
    • 77049093432 scopus 로고    scopus 로고
    • Neuronal circuits involving ghrelin in the hypothalamus-mediated regulation of feeding
    • Kageyama, H., Takenoya, F., Shiba, K., and Shioda, S. (2010) Neuronal circuits involving ghrelin in the hypothalamus-mediated regulation of feeding Neuropeptides 44, 133-138
    • (2010) Neuropeptides , vol.44 , pp. 133-138
    • Kageyama, H.1    Takenoya, F.2    Shiba, K.3    Shioda, S.4
  • 25
    • 77956214595 scopus 로고    scopus 로고
    • The mechanism of the development of drug dependence
    • Fujita, W., Takahashi, M., and Tokuyama, S. (2010) [The mechanism of the development of drug dependence] Nihon Rinsho 68, 1445-1450
    • (2010) Nihon Rinsho , vol.68 , pp. 1445-1450
    • Fujita, W.1    Takahashi, M.2    Tokuyama, S.3
  • 27
    • 16244373061 scopus 로고    scopus 로고
    • The role of previous exposure in the appetitive and consummatory effects of orexigenic neuropeptides
    • DOI 10.1016/j.peptides.2004.12.012
    • Benoit, S. C., Clegg, D. J., Woods, S. C., and Seeley, R. J. (2005) The role of previous exposure in the appetitive and consummatory effects of orexigenic neuropeptides Peptides 26, 751-757 (Pubitemid 40461656)
    • (2005) Peptides , vol.26 , Issue.5 , pp. 751-757
    • Benoit, S.C.1    Clegg, D.J.2    Woods, S.C.3    Seeley, R.J.4
  • 29
    • 38449083117 scopus 로고    scopus 로고
    • Regulatory mechanism of sleep/wakefulness states by orexin
    • Sakurai, T. (2007) Regulatory mechanism of sleep/wakefulness states by orexin Tanpakushitsu Kakusan Koso 52, 1840-1848
    • (2007) Tanpakushitsu Kakusan Koso , vol.52 , pp. 1840-1848
    • Sakurai, T.1
  • 30
    • 77957359098 scopus 로고    scopus 로고
    • Orexins in the paraventricular nucleus of the thalamus mediate anxiety-like responses in rats
    • Li, Y., Li, S., Wei, C., Wang, H., Sui, N., and Kirouac, G. J. (2010) Orexins in the paraventricular nucleus of the thalamus mediate anxiety-like responses in rats Psychopharmacology (Berlin, Ger.) 212, 251-265
    • (2010) Psychopharmacology (Berlin, Ger.) , vol.212 , pp. 251-265
    • Li, Y.1    Li, S.2    Wei, C.3    Wang, H.4    Sui, N.5    Kirouac, G.J.6
  • 31
    • 18144389456 scopus 로고    scopus 로고
    • Orexin-A (hypocretin-1) is possibly involved in generation of anxiety-like behavior
    • DOI 10.1016/j.brainres.2005.03.002
    • Suzuki, M., Beuckmann, C. T., Shikata, K., Ogura, H., and Sawai, T. (2005) Orexin-A (hypocretin-1) is possibly involved in generation of anxiety-like behavior Brain Res. 1044, 116-121 (Pubitemid 40616058)
    • (2005) Brain Research , vol.1044 , Issue.1 , pp. 116-121
    • Suzuki, M.1    Beuckmann, C.T.2    Shikata, K.3    Ogura, H.4    Sawai, T.5
  • 33
    • 0034008410 scopus 로고    scopus 로고
    • The novel brain neuropeptide, orexin-A, modulates the sleep-wake cycle of rats
    • DOI 10.1046/j.1460-9568.2000.00919.x
    • Piper, D. C., Upton, N., Smith, M. I., and Hunter, A. J. (2000) The novel brain neuropeptide, orexin-A, modulates the sleep-wake cycle of rats Eur. J. Neurosci. 12, 726-730 (Pubitemid 30142774)
    • (2000) European Journal of Neuroscience , vol.12 , Issue.2 , pp. 726-730
    • Piper, D.C.1    Upton, N.2    Smith, M.I.3    Hunter, A.J.4
  • 34
    • 0033572804 scopus 로고    scopus 로고
    • Solution structure of a new hypothalamic neuropeptide, human hypocretin- 2/orexin-B
    • DOI 10.1046/j.1432-1327.1999.00911.x
    • Lee, J. H., Bang, E., Chae, K. J., Kim, J. Y., Lee, D. W., and Lee, W. (1999) Solution structure of a new hypothalamic neuropeptide, human hypocretin-2/orexin-B Eur. J. Biochem. 266, 831-839 (Pubitemid 30010100)
    • (1999) European Journal of Biochemistry , vol.266 , Issue.3 , pp. 831-839
    • Lee, J.-H.1    Bang, E.2    Chae, K.-J.3    Kim, J.-Y.4    Lee, D.W.5    Lee, W.6
  • 36
    • 80455165975 scopus 로고    scopus 로고
    • Pharmacological advances in the treatment of insomnia
    • Richey, S. M. and Krystal, A. D. (2011) Pharmacological advances in the treatment of insomnia Curr. Pharm. Des. 17, 1471-1475
    • (2011) Curr. Pharm. Des. , vol.17 , pp. 1471-1475
    • Richey, S.M.1    Krystal, A.D.2
  • 38
    • 79952946685 scopus 로고    scopus 로고
    • Discovery of dual orexin receptor antagonists (DORAs) for the treatment of insomnia
    • Coleman, P. J., Cox, C. D., and Roecker, A. J. (2011) Discovery of dual orexin receptor antagonists (DORAs) for the treatment of insomnia Curr. Top. Med. Chem. 11, 696-725
    • (2011) Curr. Top. Med. Chem. , vol.11 , pp. 696-725
    • Coleman, P.J.1    Cox, C.D.2    Roecker, A.J.3
  • 39
    • 78649263307 scopus 로고    scopus 로고
    • Targeting the orexin system: A new approach for treating insomnia
    • Arias-Carrion, O. and Stamelou, M. (2010) Targeting the orexin system: A new approach for treating insomnia CNS Neurol. Disord.: Drug Targets 9, 667
    • (2010) CNS Neurol. Disord.: Drug Targets , vol.9 , pp. 667
    • Arias-Carrion, O.1    Stamelou, M.2
  • 40
    • 69949157717 scopus 로고    scopus 로고
    • Emerging drugs for insomnia: New frontiers for old and novel targets
    • Sullivan, S. S. and Guilleminault, C. (2009) Emerging drugs for insomnia: New frontiers for old and novel targets Expert Opin. Emerging Drugs 14, 411-422
    • (2009) Expert Opin. Emerging Drugs , vol.14 , pp. 411-422
    • Sullivan, S.S.1    Guilleminault, C.2
  • 41
    • 74549127520 scopus 로고    scopus 로고
    • Almorexant, a dual orexin receptor antagonist for the treatment of insomnia
    • Neubauer, D. N. (2010) Almorexant, a dual orexin receptor antagonist for the treatment of insomnia Curr. Opin. Invest. Drugs 11, 101-110
    • (2010) Curr. Opin. Invest. Drugs , vol.11 , pp. 101-110
    • Neubauer, D.N.1
  • 42
    • 69549083464 scopus 로고    scopus 로고
    • Biochemical and electrophysiological characterization of almorexant, a dual orexin 1 receptor (OX1)/orexin 2 receptor (OX2) antagonist: Comparison with selective OX1 and OX2 antagonists
    • Malherbe, P., Borroni, E., Pinard, E., Wettstein, J. G., and Knoflach, F. (2009) Biochemical and electrophysiological characterization of almorexant, a dual orexin 1 receptor (OX1)/orexin 2 receptor (OX2) antagonist: Comparison with selective OX1 and OX2 antagonists Mol. Pharmacol. 76, 618-631
    • (2009) Mol. Pharmacol. , vol.76 , pp. 618-631
    • Malherbe, P.1    Borroni, E.2    Pinard, E.3    Wettstein, J.G.4    Knoflach, F.5
  • 43
    • 79951994324 scopus 로고    scopus 로고
    • Orexin receptors: Pharmacology and therapeutic opportunities
    • Scammell, T. E. and Winrow, C. J. (2011) Orexin receptors: Pharmacology and therapeutic opportunities Annu. Rev. Pharmacol. Toxicol. 51, 243-266
    • (2011) Annu. Rev. Pharmacol. Toxicol. , vol.51 , pp. 243-266
    • Scammell, T.E.1    Winrow, C.J.2
  • 44
    • 79959658698 scopus 로고    scopus 로고
    • Hypothalamic orexin system: From orphan GPCR to therapeutic target
    • Yanagisawa, M. (2011) Hypothalamic orexin system: From orphan GPCR to therapeutic target Exp. Anim. 60, 199
    • (2011) Exp. Anim. , vol.60 , pp. 199
    • Yanagisawa, M.1
  • 48
    • 84855198879 scopus 로고    scopus 로고
    • Mapping of the binding sites for the OX(1) orexin receptor antagonist, SB-334867, using orexin/hypocretin receptor chimaeras
    • 506
    • Putula, J. and Kukkonen, J. P. (2011) Mapping of the binding sites for the OX(1) orexin receptor antagonist, SB-334867, using orexin/hypocretin receptor chimaeras Neurosci. Lett. 111-115 506
    • (2011) Neurosci. Lett. , pp. 111-115
    • Putula, J.1    Kukkonen, J.P.2
  • 51
    • 79955721878 scopus 로고    scopus 로고
    • Progress in the structural prediction of G protein-coupled receptors: D3 receptor in complex with eticlopride
    • Obiol-Pardo, C., Lopez, L., Pastor, M., and Selent, J. (2011) Progress in the structural prediction of G protein-coupled receptors: D3 receptor in complex with eticlopride Proteins 79, 1695-1703
    • (2011) Proteins , vol.79 , pp. 1695-1703
    • Obiol-Pardo, C.1    Lopez, L.2    Pastor, M.3    Selent, J.4
  • 54
    • 77949370572 scopus 로고    scopus 로고
    • The impact of GPCR structures on pharmacology and structure-based drug design
    • Congreve, M. and Marshall, F. (2010) The impact of GPCR structures on pharmacology and structure-based drug design Br. J. Pharmacol. 159, 986-996
    • (2010) Br. J. Pharmacol. , vol.159 , pp. 986-996
    • Congreve, M.1    Marshall, F.2
  • 55
    • 40549111917 scopus 로고    scopus 로고
    • Modeling molecular mechanisms of binding of the anaphylatoxin C5a to the C5a receptor
    • DOI 10.1021/bi702321a
    • Nikiforovich, G. V., Marshall, G. R., and Baranski, T. J. (2008) Modeling molecular mechanisms of binding of the anaphylatoxin C5a to the C5a receptor Biochemistry 47, 3117-3130 (Pubitemid 351364905)
    • (2008) Biochemistry , vol.47 , Issue.10 , pp. 3117-3130
    • Nikiforovich, G.V.1    Marshall, G.R.2    Baranski, T.J.3
  • 59
    • 77950519682 scopus 로고    scopus 로고
    • Predicted 3D structures for adenosine receptors bound to ligands: Comparison to the crystal structure
    • Goddard, W. A., Kim, S. K., Li, Y., Trzaskowski, B., Griffith, A. R., and Abrol, R. (2010) Predicted 3D structures for adenosine receptors bound to ligands: Comparison to the crystal structure J. Struct. Biol. 170, 10-20
    • (2010) J. Struct. Biol. , vol.170 , pp. 10-20
    • Goddard, W.A.1    Kim, S.K.2    Li, Y.3    Trzaskowski, B.4    Griffith, A.R.5    Abrol, R.6
  • 60
    • 49649120129 scopus 로고    scopus 로고
    • The structure of human serotonin 2c G-protein-coupled receptor bound to agonists and antagonists
    • Bray, J. K. and Goddard, W. A., III (2008) The structure of human serotonin 2c G-protein-coupled receptor bound to agonists and antagonists J. Mol. Graphics Modell. 27, 66-81
    • (2008) J. Mol. Graphics Modell. , vol.27 , pp. 66-81
    • Bray, J.K.1    Iii, A.G.W.2
  • 62
    • 34249817116 scopus 로고    scopus 로고
    • 3-dimensional structures of G protein-coupled receptors and binding sites of agonists and antagonists
    • Goddard, W. A. and Abrol, R. (2007) 3-Dimensional structures of G protein-coupled receptors and binding sites of agonists and antagonists J. Nutr. 137, 1528S-1538S (Pubitemid 46855502)
    • (2007) Journal of Nutrition , vol.137 , Issue.6
    • Goddard III, W.A.1    Abrol, R.2
  • 66
    • 75949094235 scopus 로고    scopus 로고
    • New vistas in GPCR 3D structure prediction
    • Rayan, A. (2010) New vistas in GPCR 3D structure prediction J. Mol. Model. 16, 183-191
    • (2010) J. Mol. Model. , vol.16 , pp. 183-191
    • Rayan, A.1
  • 67
    • 70349513038 scopus 로고    scopus 로고
    • Comparative sequence and structural analyses of G-protein-coupled receptor crystal structures and implications for molecular models
    • Worth, C. L., Kleinau, G., and Krause, G. (2009) Comparative sequence and structural analyses of G-protein-coupled receptor crystal structures and implications for molecular models PLoS One 4, e7011
    • (2009) PLoS One , vol.4 , pp. 7011
    • Worth, C.L.1    Kleinau, G.2    Krause, G.3
  • 69
    • 65649087871 scopus 로고    scopus 로고
    • Computational modeling of intramolecular and intermolecular communication in GPCRs
    • Fanelli, F., De Benedetti, P. G., Raimondi, F., and Seeber, M. (2009) Computational modeling of intramolecular and intermolecular communication in GPCRs Curr. Protein Pept. Sci. 10, 173-185
    • (2009) Curr. Protein Pept. Sci. , vol.10 , pp. 173-185
    • Fanelli, F.1    De Benedetti, P.G.2    Raimondi, F.3    Seeber, M.4
  • 70
    • 25444444202 scopus 로고    scopus 로고
    • Computational modeling approaches to structure-function analysis of G protein-coupled receptors
    • DOI 10.1021/cr000095n
    • Fanelli, F. and De Benedetti, P. G. (2005) Computational modeling approaches to structure-function analysis of G protein-coupled receptors Chem. Rev. 105, 3297-3351 (Pubitemid 41430812)
    • (2005) Chemical Reviews , vol.105 , Issue.9 , pp. 3297-3351
    • Fanelli, F.1    De Benedetti, P.G.2
  • 71
    • 80054795187 scopus 로고    scopus 로고
    • GPCR agonist binding revealed by modeling and crystallography
    • Katritch, V. and Abagyan, R. (2011) GPCR agonist binding revealed by modeling and crystallography Trends Pharmacol. Sci. 32, 637-643
    • (2011) Trends Pharmacol. Sci. , vol.32 , pp. 637-643
    • Katritch, V.1    Abagyan, R.2
  • 72
    • 80051521545 scopus 로고    scopus 로고
    • Status of GPCR modeling and docking as reflected by community-wide GPCR Dock 2010 assessment
    • Kufareva, I., Rueda, M., Katritch, V., Stevens, R. C., and Abagyan, R. (2011) Status of GPCR modeling and docking as reflected by community-wide GPCR Dock 2010 assessment Structure 19, 1108-1126
    • (2011) Structure , vol.19 , pp. 1108-1126
    • Kufareva, I.1    Rueda, M.2    Katritch, V.3    Stevens, R.C.4    Abagyan, R.5
  • 73
    • 82255172411 scopus 로고    scopus 로고
    • Structure-based discovery of allosteric modulators of two related class b G-protein-coupled receptors
    • de Graaf, C., Rein, C., Piwnica, D., Giordanetto, F., and Rognan, D. (2011) Structure-based discovery of allosteric modulators of two related class b G-protein-coupled receptors ChemMedChem 6, 2159-2169
    • (2011) ChemMedChem , vol.6 , pp. 2159-2169
    • De Graaf, C.1    Rein, C.2    Piwnica, D.3    Giordanetto, F.4    Rognan, D.5
  • 74
    • 78149501220 scopus 로고    scopus 로고
    • Structure-based drug discovery and protein targets in the CNS
    • Hubbard, R. E. (2011) Structure-based drug discovery and protein targets in the CNS Neuropharmacology 60, 7-23
    • (2011) Neuropharmacology , vol.60 , pp. 7-23
    • Hubbard, R.E.1
  • 76
    • 73549104285 scopus 로고    scopus 로고
    • The year in G protein-coupled receptor research
    • Millar, R. P. and Newton, C. L. (2010) The year in G protein-coupled receptor research Mol. Endocrinol. 24, 261-274
    • (2010) Mol. Endocrinol. , vol.24 , pp. 261-274
    • Millar, R.P.1    Newton, C.L.2
  • 77
    • 80855148236 scopus 로고    scopus 로고
    • The structure of active opsin as a basis for identification of GPCR agonists by dynamic homology modelling and virtual screening assays
    • Schneider, M., Wolf, S., Schlitter, J., and Gerwert, K. (2011) The structure of active opsin as a basis for identification of GPCR agonists by dynamic homology modelling and virtual screening assays FEBS Lett. 585, 3587-3592
    • (2011) FEBS Lett. , vol.585 , pp. 3587-3592
    • Schneider, M.1    Wolf, S.2    Schlitter, J.3    Gerwert, K.4
  • 78
    • 80051995202 scopus 로고    scopus 로고
    • G-protein coupled receptors virtual screening using genetic algorithm focused chemical space
    • Sage, C., Wang, R., and Jones, G. (2011) G-protein coupled receptors virtual screening using genetic algorithm focused chemical space J. Chem. Inf. Model. 51, 1754-1761
    • (2011) J. Chem. Inf. Model. , vol.51 , pp. 1754-1761
    • Sage, C.1    Wang, R.2    Jones, G.3
  • 79
    • 79751525956 scopus 로고    scopus 로고
    • Docking-based virtual screening for ligands of G protein-coupled receptors: Not only crystal structures but also in silico models
    • Vilar, S., Ferino, G., Phatak, S. S., Berk, B., Cavasotto, C. N., and Costanzi, S. (2011) Docking-based virtual screening for ligands of G protein-coupled receptors: Not only crystal structures but also in silico models J. Mol. Graphics Modell. 29, 614-623
    • (2011) J. Mol. Graphics Modell. , vol.29 , pp. 614-623
    • Vilar, S.1    Ferino, G.2    Phatak, S.S.3    Berk, B.4    Cavasotto, C.N.5    Costanzi, S.6
  • 80
    • 52749098733 scopus 로고    scopus 로고
    • Virtual screening of GPCRs: An in silico chemogenomics approach
    • Jacob, L., Hoffmann, B., Stoven, V., and Vert, J. P. (2008) Virtual screening of GPCRs: An in silico chemogenomics approach BMC Bioinf. 9, 363
    • (2008) BMC Bioinf. , vol.9 , pp. 363
    • Jacob, L.1    Hoffmann, B.2    Stoven, V.3    Vert, J.P.4
  • 81
    • 45749109114 scopus 로고    scopus 로고
    • Homology model-based virtual screening for GPCR ligands using docking and target-biased scoring
    • Radestock, S., Weil, T., and Renner, S. (2008) Homology model-based virtual screening for GPCR ligands using docking and target-biased scoring J. Chem. Inf. Model. 48, 1104-1117
    • (2008) J. Chem. Inf. Model. , vol.48 , pp. 1104-1117
    • Radestock, S.1    Weil, T.2    Renner, S.3
  • 84
    • 34547691007 scopus 로고    scopus 로고
    • GPCR structure-based virtual screening approach for CB2 antagonist search
    • DOI 10.1021/ci7000814
    • Chen, J. Z., Wang, J., and Xie, X. Q. (2007) GPCR structure-based virtual screening approach for CB2 antagonist search J. Chem. Inf. Model. 47, 1626-1637 (Pubitemid 47210066)
    • (2007) Journal of Chemical Information and Modeling , vol.47 , Issue.4 , pp. 1626-1637
    • Chen, J.-Z.1    Wang, J.2    Xie, X.-Q.3
  • 85
    • 13944255377 scopus 로고    scopus 로고
    • Structure-based drug discovery using GPCR homology modeling: Successful virtual screening for antagonists of the alpha1A adrenergic receptor
    • DOI 10.1021/jm0491804
    • Evers, A. and Klabunde, T. (2005) Structure-based drug discovery using GPCR homology modeling: Successful virtual screening for antagonists of the α1A adrenergic receptor J. Med. Chem. 48, 1088-1097 (Pubitemid 40270452)
    • (2005) Journal of Medicinal Chemistry , vol.48 , Issue.4 , pp. 1088-1097
    • Evers, A.1    Klabunde, T.2
  • 86
    • 79955956206 scopus 로고    scopus 로고
    • The use of G-protein coupled receptor models in lead optimization
    • Tautermann, C. S. (2011) The use of G-protein coupled receptor models in lead optimization Future Med. Chem. 3, 709-721
    • (2011) Future Med. Chem. , vol.3 , pp. 709-721
    • Tautermann, C.S.1
  • 87
    • 84856743821 scopus 로고    scopus 로고
    • Dynamics of the G protein-coupled vasopressin V2 receptor signaling network revealed by quantitative phosphoproteomics
    • Hoffert, J. D., Pisitkun, T., Saeed, F., Song, J. H., Chou, C. L., and Knepper, M. A. (2011) Dynamics of the G protein-coupled vasopressin V2 receptor signaling network revealed by quantitative phosphoproteomics Mol. Cell. Proteomics 11, M111.014613
    • (2011) Mol. Cell. Proteomics , vol.11 , pp. 111014613
    • Hoffert, J.D.1    Pisitkun, T.2    Saeed, F.3    Song, J.H.4    Chou, C.L.5    Knepper, M.A.6
  • 89
    • 79955849270 scopus 로고    scopus 로고
    • Molecular dynamics simulations reveal insights into key structural elements of adenosine receptors
    • Rodriguez, D., Pineiro, A., and Gutierrez-de-Teran, H. (2011) Molecular dynamics simulations reveal insights into key structural elements of adenosine receptors Biochemistry 50, 4194-4208
    • (2011) Biochemistry , vol.50 , pp. 4194-4208
    • Rodriguez, D.1    Pineiro, A.2    Gutierrez-De-Teran, H.3
  • 90
    • 79955811328 scopus 로고    scopus 로고
    • Recent progress in the study of G protein-coupled receptors with molecular dynamics computer simulations
    • Grossfield, A. (2011) Recent progress in the study of G protein-coupled receptors with molecular dynamics computer simulations Biochim. Biophys. Acta 1808, 1868-1878
    • (2011) Biochim. Biophys. Acta , vol.1808 , pp. 1868-1878
    • Grossfield, A.1
  • 92
    • 67650089750 scopus 로고    scopus 로고
    • Molecular dynamics simulation of the heterodimeric mGluR2/5HT(2A) complex. An atomistic resolution study of a potential new target in psychiatric conditions
    • Bruno, A., Guadix, A. E., and Costantino, G. (2009) Molecular dynamics simulation of the heterodimeric mGluR2/5HT(2A) complex. An atomistic resolution study of a potential new target in psychiatric conditions J. Chem. Inf. Model. 49, 1602-1616
    • (2009) J. Chem. Inf. Model. , vol.49 , pp. 1602-1616
    • Bruno, A.1    Guadix, A.E.2    Costantino, G.3
  • 93
    • 47349116596 scopus 로고    scopus 로고
    • Activation mechanism of the human histamine H4 receptor: An explicit membrane molecular dynamics simulation study
    • Jojart, B., Kiss, R., Viskolcz, B., and Keseru, G. M. (2008) Activation mechanism of the human histamine H4 receptor: An explicit membrane molecular dynamics simulation study J. Chem. Inf. Model. 48, 1199-1210
    • (2008) J. Chem. Inf. Model. , vol.48 , pp. 1199-1210
    • Jojart, B.1    Kiss, R.2    Viskolcz, B.3    Keseru, G.M.4
  • 94
    • 44349158391 scopus 로고    scopus 로고
    • Expanding GPCR homology model binding sites via a balloon potential: A molecular dynamics refinement approach
    • DOI 10.1002/prot.21906
    • Kimura, S. R., Tebben, A. J., and Langley, D. R. (2008) Expanding GPCR homology model binding sites via a balloon potential: A molecular dynamics refinement approach Proteins 71, 1919-1929 (Pubitemid 351732945)
    • (2008) Proteins: Structure, Function and Genetics , vol.71 , Issue.4 , pp. 1919-1929
    • Kimura, S.R.1    Tebben, A.J.2    Langley, D.R.3
  • 95
    • 33845900510 scopus 로고    scopus 로고
    • 3 receptor: Agonist induced conformational changes of Trp243
    • DOI 10.1007/s10822-006-9088-5
    • Hallmen, C. and Wiese, M. (2006) Molecular dynamics simulation of the human adenosine A3 receptor: Agonist induced conformational changes of Trp243 J. Comput.-Aided Mol. Des. 20, 673-684 (Pubitemid 46023929)
    • (2006) Journal of Computer-Aided Molecular Design , vol.20 , Issue.10-11 , pp. 673-684
    • Hallmen, C.1    Wiese, M.2
  • 96
    • 34347370129 scopus 로고    scopus 로고
    • Dynamic models of G-protein coupled receptor dimers: Indications of asymmetry in the rhodopsin dimer from molecular dynamics simulations in a POPC bilayer
    • DOI 10.1007/s10822-006-9053-3
    • Filizola, M., Wang, S. X., and Weinstein, H. (2006) Dynamic models of G-protein coupled receptor dimers: Indications of asymmetry in the rhodopsin dimer from molecular dynamics simulations in a POPC bilayer J. Comput.-Aided Mol. Des. 20, 405-416 (Pubitemid 44823879)
    • (2006) Journal of Computer-Aided Molecular Design , vol.20 , Issue.7-8 , pp. 405-416
    • Filizola, M.1    Wang, S.X.2    Weinstein, H.3
  • 97
    • 29244479584 scopus 로고    scopus 로고
    • Molecular dynamics simulations of bovine rhodopsin: Influence of protonation states and different membrane-mimicking environments
    • DOI 10.1007/s00894-005-0004-z
    • Schlegel, B., Sippl, W., and Holtje, H. D. (2005) Molecular dynamics simulations of bovine rhodopsin: Influence of protonation states and different membrane-mimicking environments J. Mol. Model. 12, 49-64 (Pubitemid 41829658)
    • (2005) Journal of Molecular Modeling , vol.12 , Issue.1 , pp. 49-64
    • Schlegel, B.1    Sippl, W.2    Holtje, H.-D.3
  • 98
    • 77957055780 scopus 로고
    • Integrated methods for construction three dimensional models and computational probing of structure-function relations in G protein-coupled receptors
    • Ballesteros, J. A. and Weinstein, H. (1995) Integrated methods for construction three dimensional models and computational probing of structure-function relations in G protein-coupled receptors Methods Neurosci. 25, 366-428
    • (1995) Methods Neurosci. , vol.25 , pp. 366-428
    • Ballesteros, J.A.1    Weinstein, H.2
  • 101
    • 77955984298 scopus 로고    scopus 로고
    • The crystallographic structure of the human adenosine A2A receptor in a high-affinity antagonist-bound state: Implications for GPCR drug screening and design
    • Jaakola, V. P. and Ijzerman, A. P. (2010) The crystallographic structure of the human adenosine A2A receptor in a high-affinity antagonist-bound state: Implications for GPCR drug screening and design Curr. Opin. Struct. Biol. 20, 401-414
    • (2010) Curr. Opin. Struct. Biol. , vol.20 , pp. 401-414
    • Jaakola, V.P.1    Ijzerman, A.P.2
  • 103
    • 0014757386 scopus 로고
    • A general method applicable to the search for similarities in the amino acid sequence of two proteins
    • Needleman, S. B. and Wunsch, C. D. (1970) A general method applicable to the search for similarities in the amino acid sequence of two proteins J. Mol. Biol. 48, 443-453
    • (1970) J. Mol. Biol. , vol.48 , pp. 443-453
    • Needleman, S.B.1    Wunsch, C.D.2
  • 104
    • 40449129755 scopus 로고    scopus 로고
    • BLOSUM62 miscalculations improve search performance
    • DOI 10.1038/nbt0308-274, PII NBT0308274
    • Styczynski, M. P., Jensen, K. L., Rigoutsos, I., and Stephanopoulos, G. (2008) BLOSUM62 miscalculations improve search performance Nat. Biotechnol. 26, 274-275 (Pubitemid 351355114)
    • (2008) Nature Biotechnology , vol.26 , Issue.3 , pp. 274-275
    • Styczynski, M.P.1    Jensen, K.L.2    Rigoutsos, I.3    Stephanopoulos, G.4
  • 105
    • 0027506471 scopus 로고
    • The probable arrangement of the helices in G protein-coupled receptors
    • Baldwin, J. M. (1993) The probable arrangement of the helices in G protein-coupled receptors EMBO J. 12, 1693-1703 (Pubitemid 23112824)
    • (1993) EMBO Journal , vol.12 , Issue.4 , pp. 1693-1703
    • Baldwin, J.M.1
  • 107
    • 67650753759 scopus 로고    scopus 로고
    • Definition of the G protein-coupled receptor transmembrane bundle binding pocket and calculation of receptor similarities for drug design
    • Gloriam, D. E., Foord, S. M., Blaney, F. E., and Garland, S. L. (2009) Definition of the G protein-coupled receptor transmembrane bundle binding pocket and calculation of receptor similarities for drug design J. Med. Chem. 52, 4429-4442
    • (2009) J. Med. Chem. , vol.52 , pp. 4429-4442
    • Gloriam, D.E.1    Foord, S.M.2    Blaney, F.E.3    Garland, S.L.4
  • 108
    • 33750349025 scopus 로고    scopus 로고
    • Classification of G-protein coupled receptors at four levels
    • Gao, Q. B. and Wang, Z. Z. (2006) Classification of G-protein coupled receptors at four levels Protein Eng., Des. Sel. 19, 511-516
    • (2006) Protein Eng., Des. Sel. , vol.19 , pp. 511-516
    • Gao, Q.B.1    Wang, Z.Z.2
  • 109
    • 33644509247 scopus 로고    scopus 로고
    • A general model of G protein-coupled receptor sequences and its application to detect remote homologs
    • Wistrand, M., Kall, L., and Sonnhammer, E. L. (2006) A general model of G protein-coupled receptor sequences and its application to detect remote homologs Protein Sci. 15, 509-521
    • (2006) Protein Sci. , vol.15 , pp. 509-521
    • Wistrand, M.1    Kall, L.2    Sonnhammer, E.L.3
  • 110
    • 79959719805 scopus 로고    scopus 로고
    • The approach of conformational chimeras to model the role of proline-containing helices on GPCR mobility: The fertile case of Cys-LTR1
    • Bettinelli, I., Graziani, D., Marconi, C., Pedretti, A., and Vistoli, G. (2011) The approach of conformational chimeras to model the role of proline-containing helices on GPCR mobility: The fertile case of Cys-LTR1 ChemMedChem 6, 1217-1227
    • (2011) ChemMedChem , vol.6 , pp. 1217-1227
    • Bettinelli, I.1    Graziani, D.2    Marconi, C.3    Pedretti, A.4    Vistoli, G.5
  • 111
    • 78650702465 scopus 로고    scopus 로고
    • Improved helix and kink characterization in membrane proteins allows evaluation of kink sequence predictors
    • Langelaan, D. N., Wieczorek, M., Blouin, C., and Rainey, J. K. (2010) Improved helix and kink characterization in membrane proteins allows evaluation of kink sequence predictors J. Chem. Inf. Model. 50, 2213-2220
    • (2010) J. Chem. Inf. Model. , vol.50 , pp. 2213-2220
    • Langelaan, D.N.1    Wieczorek, M.2    Blouin, C.3    Rainey, J.K.4
  • 112
    • 67349266230 scopus 로고    scopus 로고
    • Position of helical kinks in membrane protein crystal structures and the accuracy of computational prediction
    • Hall, S. E., Roberts, K., and Vaidehi, N. (2009) Position of helical kinks in membrane protein crystal structures and the accuracy of computational prediction J. Mol. Graphics Modell. 27, 944-950
    • (2009) J. Mol. Graphics Modell. , vol.27 , pp. 944-950
    • Hall, S.E.1    Roberts, K.2    Vaidehi, N.3
  • 114
    • 0028856911 scopus 로고
    • Prediction of protein three-dimensional structures in insertion and deletion regions: A procedure for searching data bases of representative protein fragments using geometric scoring criteria
    • Fechteler, T., Dengler, U., and Schomburg, D. (1995) Prediction of protein three-dimensional structures in insertion and deletion regions: A procedure for searching data bases of representative protein fragments using geometric scoring criteria J. Mol. Biol. 253, 114-131
    • (1995) J. Mol. Biol. , vol.253 , pp. 114-131
    • Fechteler, T.1    Dengler, U.2    Schomburg, D.3
  • 115
    • 80053199500 scopus 로고    scopus 로고
    • Modeling the interactions between polyoxometalates and their environment
    • Courcot, B. and Bridgeman, A. J. (2011) Modeling the interactions between polyoxometalates and their environment J. Comput. Chem. 32, 3143-3153
    • (2011) J. Comput. Chem. , vol.32 , pp. 3143-3153
    • Courcot, B.1    Bridgeman, A.J.2
  • 117
    • 46249092554 scopus 로고    scopus 로고
    • GROMACS 4 Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation
    • Hess, B., Kutzner, C., van Der Spoel, D., and Lindahl, E. (2008) GROMACS 4 Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation J. Chem. Theory Comput. 4, 435-447
    • (2008) J. Chem. Theory Comput. , vol.4 , pp. 435-447
    • Hess, B.1    Kutzner, C.2    Van Der Spoel, D.3    Lindahl, E.4
  • 118
    • 0029912748 scopus 로고    scopus 로고
    • Development and testing of the OPLS all-atom force field on conformational energetics and properties of organic liquids
    • DOI 10.1021/ja9621760, PII S0002786396021762
    • Jorgensen, W., Maxwell, L. D. S., and Tirado, R. J. (1996) Development and testing of the OPLS all-atom force field on conformational energetics and properties of organic liquids J. Am. Chem. Soc. 118, 11225-11236 (Pubitemid 26399746)
    • (1996) Journal of the American Chemical Society , vol.118 , Issue.45 , pp. 11225-11236
    • Jorgensen, W.L.1    Maxwell, D.S.2    Tirado-Rives, J.3
  • 119
    • 0035913529 scopus 로고    scopus 로고
    • Evaluation and reparametrization of the OPLS-AA force field for proteins via comparison with accurate quantum chemical calculations on peptides
    • DOI 10.1021/jp003919d
    • Kaminski, G. A., Friesner, J., Tirado, R. J., and Jorgensen, W. (2001) Evaluation and reparameterization of the OPLS-AA force field for proteins via comparison with accurate quantum chemical calculations on peptides J. Phys. Chem. B 105, 6474-6487 (Pubitemid 35339015)
    • (2001) Journal of Physical Chemistry B , vol.105 , Issue.28 , pp. 6474-6487
    • Kaminski, G.A.1    Friesner, R.A.2    Tirado-Rives, J.3    Jorgensen, W.L.4
  • 121
    • 84943200457 scopus 로고
    • A leap-frog algorithm for stochastic dynamics
    • Van-Gunsteren, W. F. and Berensden, H. J. C. (1988) A leap-frog algorithm for stochastic dynamics Mol. Simul. 1, 173-185
    • (1988) Mol. Simul. , vol.1 , pp. 173-185
    • Van-Gunsteren, W.F.1    Berensden, H.J.C.2
  • 122
    • 77954256616 scopus 로고    scopus 로고
    • G-membed: Efficient insertion of a membrane protein into an equilibrated lipid bilayer with minimal perturbation
    • Wolf, M. G., Hoefling, M., Aponte-Santamaria, C., Grubmuller, H., and Groenhof, G. (2010) g-membed: Efficient insertion of a membrane protein into an equilibrated lipid bilayer with minimal perturbation J. Comput. Chem. 31, 2169-2174
    • (2010) J. Comput. Chem. , vol.31 , pp. 2169-2174
    • Wolf, M.G.1    Hoefling, M.2    Aponte-Santamaria, C.3    Grubmuller, H.4    Groenhof, G.5
  • 127
    • 79955766939 scopus 로고    scopus 로고
    • Aromatic rings in chemical and biological recognition: Energetics and structures
    • Salonen, L. M., Ellermann, M., and Diederich, F. (2011) Aromatic rings in chemical and biological recognition: Energetics and structures Angew. Chem., Int. Ed. 50, 4808-4842
    • (2011) Angew. Chem., Int. Ed. , vol.50 , pp. 4808-4842
    • Salonen, L.M.1    Ellermann, M.2    Diederich, F.3
  • 129
    • 77952756998 scopus 로고    scopus 로고
    • LowModeMD: Implicit low-mode velocity filtering applied to conformational search of macrocycles and protein loops
    • Labute, P. (2010) LowModeMD: Implicit low-mode velocity filtering applied to conformational search of macrocycles and protein loops J. Chem. Inf. Model. 50, 792-800
    • (2010) J. Chem. Inf. Model. , vol.50 , pp. 792-800
    • Labute, P.1
  • 130
    • 77955665196 scopus 로고    scopus 로고
    • MP2, density functional theory, and molecular mechanical calculations of C-H⋯π and hydrogen bond interactions in a cellulose-binding module-cellulose model system
    • Mohamed, M. N., Watts, H. D., Guo, J., Catchmark, J. M., and Kubicki, J. D. (2010) MP2, density functional theory, and molecular mechanical calculations of C-H⋯π and hydrogen bond interactions in a cellulose-binding module-cellulose model system Carbohydr. Res. 345, 1741-1751
    • (2010) Carbohydr. Res. , vol.345 , pp. 1741-1751
    • Mohamed, M.N.1    Watts, H.D.2    Guo, J.3    Catchmark, J.M.4    Kubicki, J.D.5
  • 132
    • 84857779012 scopus 로고    scopus 로고
    • Molecular dynamics simulations of creatine kinase and adenine nucleotide translocase in mitochondrial membrane patch
    • Karo, J., Peterson, P., and Vendelin, M. (2012) Molecular dynamics simulations of creatine kinase and adenine nucleotide translocase in mitochondrial membrane patch J. Biol. Chem. 287, 7467-7476
    • (2012) J.Biol.Chem. , vol.287 , pp. 7467-7476
    • Karo, J.1    Peterson, P.2    Vendelin, M.3
  • 133
    • 79952179744 scopus 로고    scopus 로고
    • G protein- and agonist-bound serotonin 5-HT2A receptor model activated by steered molecular dynamics simulations
    • Isberg, V., Balle, T., Sander, T., Jorgensen, F. S., and Gloriam, D. E. (2011) G protein- and agonist-bound serotonin 5-HT2A receptor model activated by steered molecular dynamics simulations J. Chem. Inf. Model. 51, 315-325
    • (2011) J. Chem. Inf. Model. , vol.51 , pp. 315-325
    • Isberg, V.1    Balle, T.2    Sander, T.3    Jorgensen, F.S.4    Gloriam, D.E.5
  • 134
    • 77951974594 scopus 로고    scopus 로고
    • Molecular docking and molecular dynamics simulation studies of GPR40 receptor-agonist interactions
    • Lu, S. Y., Jiang, Y. J., Lv, J., Wu, T. X., Yu, Q. S., and Zhu, W. L. (2010) Molecular docking and molecular dynamics simulation studies of GPR40 receptor-agonist interactions J. Mol. Graphics Modell. 28, 766-774
    • (2010) J. Mol. Graphics Modell. , vol.28 , pp. 766-774
    • Lu, S.Y.1    Jiang, Y.J.2    Lv, J.3    Wu, T.X.4    Yu, Q.S.5    Zhu, W.L.6
  • 135
    • 78649759744 scopus 로고    scopus 로고
    • G-protein-coupled receptor heteromer dynamics
    • Vilardaga, J. P., Agnati, L. F., Fuxe, K., and Ciruela, F. (2010) G-protein-coupled receptor heteromer dynamics J. Cell Sci. 123, 4215-4220
    • (2010) J. Cell Sci. , vol.123 , pp. 4215-4220
    • Vilardaga, J.P.1    Agnati, L.F.2    Fuxe, K.3    Ciruela, F.4
  • 136
    • 77954052042 scopus 로고    scopus 로고
    • Homology modeling of G-protein-coupled receptors with X-ray structures on the rise
    • Yarnitzky, T., Levit, A., and Niv, M. Y. (2010) Homology modeling of G-protein-coupled receptors with X-ray structures on the rise Curr. Opin. Drug Discovery Dev. 13, 317-325
    • (2010) Curr. Opin. Drug Discovery Dev. , vol.13 , pp. 317-325
    • Yarnitzky, T.1    Levit, A.2    Niv, M.Y.3
  • 138
    • 34548146523 scopus 로고    scopus 로고
    • G protein-coupled receptors self-assemble in dynamics simulations of model bilayers
    • DOI 10.1021/ja0706246
    • Periole, X., Huber, T., Marrink, S. J., and Sakmar, T. P. (2007) G protein-coupled receptors self-assemble in dynamics simulations of model bilayers J. Am. Chem. Soc. 129, 10126-10132 (Pubitemid 47312953)
    • (2007) Journal of the American Chemical Society , vol.129 , Issue.33 , pp. 10126-10132
    • Periole, X.1    Huber, T.2    Marrink, S.-J.3    Sakmar, T.P.4
  • 139
    • 84864118879 scopus 로고    scopus 로고
    • Phase i studies on the safety, tolerability, pharmacokinetics and pharmacodynamics of SB-649868, a novel dual orexin receptor antagonist
    • Bettica, P., Nucci, G., Pyke, C., Squassante, L., Zamuner, S., Ratti, E., Gomeni, R., and Alexander, R. (2011) Phase I studies on the safety, tolerability, pharmacokinetics and pharmacodynamics of SB-649868, a novel dual orexin receptor antagonist J. Psychopharmacol. DOI: 10.1177/0269881111408954
    • (2011) J. Psychopharmacol.
    • Bettica, P.1    Nucci, G.2    Pyke, C.3    Squassante, L.4    Zamuner, S.5    Ratti, E.6    Gomeni, R.7    Alexander, R.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.