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Volumn 21, Issue 8, 2011, Pages 1313-1327

Temporal uncoupling of the DNA methylome and transcriptional repression during embryogenesis

Author keywords

[No Author keywords available]

Indexed keywords

DNA; DNA METHYLOME; HISTONE H3; REPETITIVE DNA; UNCLASSIFIED DRUG;

EID: 80051558092     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.114843.110     Document Type: Article
Times cited : (76)

References (101)
  • 2
    • 0032830639 scopus 로고    scopus 로고
    • Rett syndrome is caused by mutations in X-linked MECP2, encoding methyl- CpG-binding protein 2
    • DOI 10.1038/13810
    • Amir RE, Van den Veyver IB, Wan M, Tran CQ, Francke U, Zoghbi HY. 1999. Rett syndrome is caused by mutations in X-linked MECP2, encoding methyl-CpG-binding protein 2. Nat Genet 23: 185-188. (Pubitemid 29455390)
    • (1999) Nature Genetics , vol.23 , Issue.2 , pp. 185-188
    • Amir, R.E.1    Van Den, V.I.B.2    Wan, M.3    Tran, C.Q.4    Francke, U.5    Zoghbi, H.Y.6
  • 5
    • 0033555906 scopus 로고    scopus 로고
    • Tandem repeats finder: A program to analyze DNA sequences
    • DOI 10.1093/nar/27.2.573
    • Benson G. 1999. Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Res 27: 573-580. (Pubitemid 29210025)
    • (1999) Nucleic Acids Research , vol.27 , Issue.2 , pp. 573-580
    • Benson, G.1
  • 7
    • 0022540321 scopus 로고
    • CpG-rich islands and the function of DNA methylation
    • Bird AP. 1986. CpG-rich islands and the function of DNA methylation. Nature 321: 209-213. (Pubitemid 16016411)
    • (1986) Nature , vol.321 , Issue.6067 , pp. 209-213
    • Bird, A.P.1
  • 8
    • 0036144048 scopus 로고    scopus 로고
    • DNA methylation patterns and epigenetic memory
    • DOI 10.1101/gad.947102
    • Bird A. 2002. DNA methylation patterns and epigenetic memory. Genes Dev 16: 6-21. (Pubitemid 34049633)
    • (2002) Genes and Development , vol.16 , Issue.1 , pp. 6-21
    • Bird, A.1
  • 11
    • 69249220176 scopus 로고    scopus 로고
    • DNA methylation and methyl-CpG binding proteins: Developmental requirements and function
    • Bogdanović O, Veenstra GJ. 2009. DNA methylation and methyl-CpG binding proteins: developmental requirements and function. Chromosoma 118: 549-565.
    • (2009) Chromosoma , vol.118 , pp. 549-565
    • Bogdanović, O.1    Veenstra, G.J.2
  • 15
    • 45849105557 scopus 로고    scopus 로고
    • MeCP2, a key contributor to neurological disease, activates and represses transcription
    • DOI 10.1126/science.1153252
    • Chahrour M, Jung SY, Shaw C, Zhou X, Wong ST, Qin J, Zoghbi HY. 2008. MECP2, a key contributor to neurological disease, activates and represses transcription. Science 320: 1224-1229. (Pubitemid 351929512)
    • (2008) Science , vol.320 , Issue.5880 , pp. 1224-1229
    • Chahrour, M.1    Sung, Y.J.2    Shaw, C.3    Zhou, X.4    Wong, S.T.C.5    Qin, J.6    Zoghbi, H.Y.7
  • 16
    • 48649091905 scopus 로고    scopus 로고
    • Polycomb repressive complex 2 is dispensable for maintenance of embryonic stem cell pluripotency
    • Chamberlain SJ, Yee D, Magnuson T. 2008. Polycomb repressive complex 2 is dispensable for maintenance of embryonic stem cell pluripotency. Stem Cells 26: 1496-1505.
    • (2008) Stem Cells , vol.26 , pp. 1496-1505
    • Chamberlain, S.J.1    Yee, D.2    Magnuson, T.3
  • 17
    • 0042132027 scopus 로고    scopus 로고
    • Establishment and maintenance of genomic methylation patterns in mouse embryonic stem cells by Dnmt3a and Dnmt3b
    • DOI 10.1128/MCB.23.16.5594-5605.2003
    • Chen T, Ueda Y, Dodge JE, Wang Z, Li E. 2003. Establishment and maintenance of genomic methylation patterns in mouse embryonic stem cells by Dnmt3a and Dnmt3b. Mol Cell Biol 23: 5594-5605. (Pubitemid 36951325)
    • (2003) Molecular and Cellular Biology , vol.23 , Issue.16 , pp. 5594-5605
    • Chen, T.1    Ueda, Y.2    Dodge, J.E.3    Wang, Z.4    Li, E.5
  • 18
    • 76249090741 scopus 로고    scopus 로고
    • Nucleosome deposition and DNA methylation at coding region boundaries
    • doi: 10.1186/gb-2009-10-9-r89
    • Choi JK, Bae JB, Lyu J, Kim TY, Kim YJ. 2009. Nucleosome deposition and DNA methylation at coding region boundaries. Genome Biol 10: R89. doi: 10.1186/gb-2009-10-9-r89.
    • (2009) Genome Biol , vol.10
    • Choi, J.K.1    Bae, J.B.2    Lyu, J.3    Kim, T.Y.4    Kim, Y.J.5
  • 20
    • 0028340280 scopus 로고
    • Purification of CpG islands using a methylated DNA binding column
    • DOI 10.1038/ng0394-236
    • Cross SH, Charlton JA, Nan X, Bird AP. 1994. Purification of CpG islands using a methylated DNA binding column. Nat Genet 6: 236-244. (Pubitemid 24188619)
    • (1994) Nature Genetics , vol.6 , Issue.3 , pp. 236-244
    • Cross, S.H.1    Charlton, J.A.2    Nan, X.3    Bird, A.P.4
  • 21
    • 0037131523 scopus 로고    scopus 로고
    • Drosophila enhancer of Zeste/ESC complexes have a histone H3 methyltransferase activity that marks chromosomal Polycomb sites
    • DOI 10.1016/S0092-8674(02)00975-3
    • Czermin B, Melfi R, McCabe D, Seitz V, Imhof A, Pirrotta V. 2002. Drosophila enhancer of Zeste/ESC complexes have a histone H3 methyltransferase activity that marks chromosomal Polycomb sites. Cell 111: 185-196. (Pubitemid 35292439)
    • (2002) Cell , vol.111 , Issue.2 , pp. 185-196
    • Czermin, B.1    Melfi, R.2    McCabe, D.3    Seitz, V.4    Imhof, A.5    Pirrotta, V.6
  • 22
    • 43049108039 scopus 로고    scopus 로고
    • xDnmt1 regulates transcriptional silencing in pre-MBT Xenopus embryos independently of its catalytic function
    • DOI 10.1242/dev.016402
    • Dunican DS, Ruzov A, Hackett JA, Meehan RR. 2008. xDnmt1 regulates transcriptional silencing in pre-MBT Xenopus embryos independently of its catalytic function. Development 135: 1295-1302. (Pubitemid 351622473)
    • (2008) Development , vol.135 , Issue.7 , pp. 1295-1302
    • Dunican, D.S.1    Ruzov, A.2    Hackett, J.A.3    Meehan, R.R.4
  • 23
    • 33845699793 scopus 로고    scopus 로고
    • NCBI GEO standards and services for microarray data [1]
    • DOI 10.1038/nbt1206-1471, PII NBT12061471
    • Edgar R, Barrett T. 2006. NCBI GEO standards and services for microarray data. Nat Biotechnol 24: 1471-1472. (Pubitemid 44967456)
    • (2006) Nature Biotechnology , vol.24 , Issue.12 , pp. 1471-1472
    • Edgar, R.1    Barrett, T.2
  • 24
    • 38649126918 scopus 로고    scopus 로고
    • Promoter CpG Methylation Contributes to ES Cell Gene Regulation in Parallel with Oct4/Nanog, PcG Complex, and Histone H3 K4/K27 Trimethylation
    • DOI 10.1016/j.stem.2007.12.011, PII S193459090700327X
    • Fouse SD, Shen Y, Pellegrini M, Cole S, Meissner A, Van Neste L, Jaenisch R, Fan G. 2008. Promoter CpG methylation contributes to ES cell gene regulation in parallel with Oct4/Nanog, PcG complex, and histone H3 K4/K27 trimethylation. Cell Stem Cell 2: 160-169. (Pubitemid 351168712)
    • (2008) Cell Stem Cell , vol.2 , Issue.2 , pp. 160-169
    • Fouse, S.D.1    Shen, Y.2    Pellegrini, M.3    Cole, S.4    Meissner, A.5    Van Neste, L.6    Jaenisch, R.7    Fan, G.8
  • 25
    • 0038412822 scopus 로고    scopus 로고
    • The DNA methyltransferases associate with HP1 and the SUV39H1 histone methyltransferase
    • DOI 10.1093/nar/gkg332
    • Fuks F, Hurd PJ, Deplus R, Kouzarides T. 2003. The DNA methyltransferases associate with HP1 and the SUV39H1 histone methyltransferase. Nucleic Acids Res 31: 2305-2312. (Pubitemid 37442098)
    • (2003) Nucleic Acids Research , vol.31 , Issue.9 , pp. 2305-2312
    • Fuks, F.1    Hurd, P.J.2    Deplus, R.3    Kouzarides, T.4
  • 27
    • 0038243168 scopus 로고    scopus 로고
    • The role of DNA methylation in setting up chromatin structure during development
    • DOI 10.1038/ng1158
    • Hashimshony T, Zhang J, Keshet I, Bustin M, Cedar H. 2003. The role of DNA methylation in setting up chromatin structure during development. Nat Genet 34: 187-192. (Pubitemid 36666930)
    • (2003) Nature Genetics , vol.34 , Issue.2 , pp. 187-192
    • Hashimshony, T.1    Zhang, J.2    Keshet, I.3    Bustin, M.4    Cedar, H.5
  • 29
    • 0031792779 scopus 로고    scopus 로고
    • Identification and characterization of a family of mammalian methyl-CpG binding proteins
    • Hendrich B, Bird A. 1998. Identification and characterization of a family of mammalian methyl-CpG binding proteins. Mol Cell Biol 18: 6538-6547. (Pubitemid 28500543)
    • (1998) Molecular and Cellular Biology , vol.18 , Issue.11 , pp. 6538-6547
    • Hendrich, B.1    Bird, A.2
  • 30
    • 0037406067 scopus 로고    scopus 로고
    • The methyl-CpG binding domain and the evolving role of DNA methylation in animals
    • DOI 10.1016/S0168-9525(03)00080-5
    • Hendrich B, Tweedie S. 2003. The methyl-CpG binding domain and the evolving role of DNA methylation in animals. Trends Genet 19: 269-277. (Pubitemid 36507009)
    • (2003) Trends in Genetics , vol.19 , Issue.5 , pp. 269-277
    • Hendrich, B.1    Tweedie, S.2
  • 31
    • 76049130688 scopus 로고    scopus 로고
    • The N-terminus of histone H3 is required for de novo DNA methylation in chromatin
    • Hu JL, Zhou BO, Zhang RR, Zhang KL, Zhou JQ, Xu GL. 2009. The N-terminus of histone H3 is required for de novo DNA methylation in chromatin. Proc Natl Acad Sci 106:22187-22192.
    • (2009) Proc Natl Acad Sci , vol.106 , pp. 22187-22192
    • Hu, J.L.1    Zhou, B.O.2    Zhang, R.R.3    Zhang, K.L.4    Zhou, J.Q.5    Xu, G.L.6
  • 32
    • 1942486344 scopus 로고    scopus 로고
    • Xenopus MBD3 plays a crucial role in an early stage of development
    • DOI 10.1016/j.ydbio.2003.12.032, PII S0012160604000296
    • Iwano H, Nakamura M, Tajima S. 2004. Xenopus MBD3 plays a crucial role in an early stage of development. Dev Biol 268: 416-428. (Pubitemid 38519853)
    • (2004) Developmental Biology , vol.268 , Issue.2 , pp. 416-428
    • Iwano, H.1    Nakamura, M.2    Tajima, S.3
  • 33
    • 4744372577 scopus 로고    scopus 로고
    • Severe global DNA hypomethylation blocks differentiation and induces histone hyperacetylation in embryonic stem cells
    • DOI 10.1128/MCB.24.20.8862-8871.2004
    • Jackson M, Krassowska A, Gilbert N, Chevassut T, Forrester L, Ansell J, Ramsahoye B. 2004. Severe global DNA hypomethylation blocks differentiation and induces histone hyperacetylation in embryonic stem cells. Mol Cell Biol 24: 8862-8871. (Pubitemid 39313892)
    • (2004) Molecular and Cellular Biology , vol.24 , Issue.20 , pp. 8862-8871
    • Jackson, M.1    Krassowska, A.2    Gilbert, N.3    Chevassut, T.4    Forrester, L.5    Ansell, J.6    Ramsahoye, B.7
  • 38
    • 0034192205 scopus 로고    scopus 로고
    • MeCP2 driven transcriptional repression in vitro: Selectivity for methylated DNA, action at a distance and contacts with the basal transcription machinery
    • Kaludov NK, Wolffe AP. 2000. MECP2 driven transcriptional repression in vitro: selectivity for methylated DNA, action at a distance and contacts with the basal transcription machinery. Nucleic Acids Res 28: 1921-1928. (Pubitemid 30229657)
    • (2000) Nucleic Acids Research , vol.28 , Issue.9 , pp. 1921-1928
    • Kaludov, N.K.1    Wolffe, A.P.2
  • 40
    • 0031104930 scopus 로고    scopus 로고
    • DNA methylation directs a time-dependent repression of transcription initiation
    • Kass SU, Landsberger N, Wolffe AP. 1997. DNA methylation directs a time-dependent repression of transcription initiation. Curr Biol 7: 157-165. (Pubitemid 27164721)
    • (1997) Current Biology , vol.7 , Issue.3 , pp. 157-165
    • Kass, S.U.1    Landsberger, N.2    Wolffe, A.P.3
  • 41
    • 0021033971 scopus 로고
    • The 1723 element: A long, homogeneous, highly repeated DNA unit interspersed in the genome of Xenopus laevis
    • Kay BK, Dawid IB. 1983. The 1723 element: A long, homogeneous, highly repeated DNA unit interspersed in the genome of Xenopus laevis. J Mol Biol 170: 583-596. (Pubitemid 14241850)
    • (1983) Journal of Molecular Biology , vol.170 , Issue.3 , pp. 583-596
    • Kay, B.K.1    Dawid, I.B.2
  • 42
    • 0021504641 scopus 로고
    • Transcription of a long, interspersed, highly repeated DNA element in Xenopus laevis
    • Kay BK, Jamrich M, Dawid IB. 1984. Transcription of a long, interspersed, highly repeated DNA element in Xenopus laevis. Dev Biol 105: 518-525.
    • (1984) Dev Biol , vol.105 , pp. 518-525
    • Kay, B.K.1    Jamrich, M.2    Dawid, I.B.3
  • 44
    • 41649121741 scopus 로고    scopus 로고
    • Using ChIP-chip technology to reveal common principles of transcriptional repression in normal and cancer cells
    • DOI 10.1101/gr.074609.107
    • Komashko VM, Acevedo LG, Squazzo SL, Iyengar SS, Rabinovich A, O'Geen H, Green R, Farnham PJ. 2008. Using ChIP-chip technology to reveal common principles of transcriptional repression in normal and cancer cells. Genome Res 18: 521-532. (Pubitemid 351482777)
    • (2008) Genome Research , vol.18 , Issue.4 , pp. 521-532
    • Komashko, V.M.1    Acevedo, L.G.2    Squazzo, S.L.3    Iyengar, S.S.4    Rabinovich, A.5    O'Geen, H.6    Green, R.7    Farnham, P.J.8
  • 46
    • 0029806183 scopus 로고    scopus 로고
    • Transgenic Xenopus embryos from sperm nuclear transplantations reveal FGF signaling requirements during gastrulation
    • Kroll KL, Amaya E. 1996. Transgenic Xenopus embryos from sperm nuclear transplantations reveal FGF signaling requirements during gastrulation. Development 122: 3173-3183. (Pubitemid 26371982)
    • (1996) Development , vol.122 , Issue.10 , pp. 3173-3183
    • Kroll, K.L.1    Amaya, E.2
  • 47
    • 77953120646 scopus 로고    scopus 로고
    • Jarid2 is a PRC2 component in embryonic stem cells required for multi-lineage differentiation and recruitment of PRC1 and RNA polymerase II to developmental regulators
    • Landeira D, Sauer S, Poot R, Dvorkina M, Mazzarella L, Jorgensen HF, Pereira CF, Leleu M, Piccolo FM, Spivakov M, et al. 2010. Jarid2 is a PRC2 component in embryonic stem cells required for multi-lineage differentiation and recruitment of PRC1 and RNA polymerase II to developmental regulators. Nat Cell Biol 12: 618-624.
    • (2010) Nat Cell Biol , vol.12 , pp. 618-624
    • Landeira, D.1    Sauer, S.2    Poot, R.3    Dvorkina, M.4    Mazzarella, L.5    Jorgensen, H.F.6    Pereira, C.F.7    Leleu, M.8    Piccolo, F.M.9    Spivakov, M.10
  • 48
    • 0029090420 scopus 로고
    • The heat shock response in Xenopus oocytes, embryos, and somatic cells: A regulatory role for chromatin
    • Landsberger N, Ranjan M, Almouzni G, Stump D, Wolffe AP. 1995. The heat shock response in Xenopus oocytes, embryos, and somatic cells: a regulatory role for chromatin. Dev Biol 170: 62-74.
    • (1995) Dev Biol , vol.170 , pp. 62-74
    • Landsberger, N.1    Ranjan, M.2    Almouzni, G.3    Stump, D.4    Wolffe, A.P.5
  • 51
    • 34447508437 scopus 로고    scopus 로고
    • Ring1B is crucial for the regulation of developmental control genes and PRC1 proteins but not X inactivation in embryonic cells
    • DOI 10.1083/jcb.200612127
    • Leeb M, Wutz A. 2007. Ring1B is crucial for the regulation of developmental control genes and PRC1 proteins but not X inactivation in embryonic cells. J Cell Biol 178: 219-229. (Pubitemid 47076459)
    • (2007) Journal of Cell Biology , vol.178 , Issue.2 , pp. 219-229
    • Leeb, M.1    Wutz, A.2
  • 52
    • 76149142791 scopus 로고    scopus 로고
    • Polycomb complexes act redundantly to repress genomic repeats and genes
    • Leeb M, Pasini D, Novatchkova M, Jaritz M, Helin K, Wutz A. 2010. Polycomb complexes act redundantly to repress genomic repeats and genes. Genes Dev 24: 265-276.
    • (2010) Genes Dev , vol.24 , pp. 265-276
    • Leeb, M.1    Pasini, D.2    Novatchkova, M.3    Jaritz, M.4    Helin, K.5    Wutz, A.6
  • 53
    • 0026708177 scopus 로고
    • Targeted mutation of the DNA methyltransferase gene results in embryonic lethality
    • Li E, Bestor TH, Jaenisch R. 1992. Targeted mutation of the DNA methyltransferase gene results in embryonic lethality. Cell 69: 915-926.
    • (1992) Cell , vol.69 , pp. 915-926
    • Li, E.1    Bestor, T.H.2    Jaenisch, R.3
  • 54
    • 55549097836 scopus 로고    scopus 로고
    • Mapping short DNA sequencing reads and calling variants using mapping quality scores
    • Li H, Ruan J, Durbin R. 2008. Mapping short DNA sequencing reads and calling variants using mapping quality scores. Genome Res 18: 1851-1858.
    • (2008) Genome Res , vol.18 , pp. 1851-1858
    • Li, H.1    Ruan, J.2    Durbin, R.3
  • 57
    • 0026060760 scopus 로고
    • Differential Compartmentalization of Plasmid DNA Microinjected into Xenopus laevis Embryos Relates to Replication Efficiency
    • Marini NJ, Benbow RM. 1991. Differential compartmentalization of plasmid DNA microinjected into Xenopus laevis embryos relates to replication efficiency. Mol Cell Biol 11: 299-308. (Pubitemid 21895207)
    • (1991) Molecular and Cellular Biology , vol.11 , Issue.1 , pp. 299-308
    • Marini, N.J.1    Benbow, R.M.2
  • 59
    • 0034598784 scopus 로고    scopus 로고
    • Demethylation of the zygotic paternal genome
    • Mayer W, Niveleau A, Walter J, Fundele R, Haaf T. 2000. Demethylation of the zygotic paternal genome. Nature 403: 501-502. (Pubitemid 30082186)
    • (2000) Nature , vol.403 , Issue.6769 , pp. 501-502
    • Mayer, W.1    Niveleau, A.2    Walter, J.3    Fundele, R.4    Haaf, T.5
  • 62
    • 51649129596 scopus 로고    scopus 로고
    • Lineage-specific Polycomb targets and de novo DNA methylation define restriction and potential of neuronal progenitors
    • Mohn F, Weber M, Rebhan M, Roloff TC, Richter J, Stadler MB, Bibel M, Schubeler D. 2008. Lineage-specific Polycomb targets and de novo DNA methylation define restriction and potential of neuronal progenitors. Mol Cell 30: 755-766.
    • (2008) Mol Cell , vol.30 , pp. 755-766
    • Mohn, F.1    Weber, M.2    Rebhan, M.3    Roloff, T.C.4    Richter, J.5    Stadler, M.B.6    Bibel, M.7    Schubeler, D.8
  • 65
    • 0032574977 scopus 로고    scopus 로고
    • Transcriptional repression by the methyl-CpG-binding protein MeCP2 involves a histone deacetylase complex
    • DOI 10.1038/30764
    • Nan X, Ng HH, Johnson CA, Laherty CD, Turner BM, Eisenman RN, Bird A. 1998. Transcriptional repression by the methyl-CpG-binding protein MECP2 involves a histone deacetylase complex. Nature 393: 386-389. (Pubitemid 28269714)
    • (1998) Nature , vol.393 , Issue.6683 , pp. 386-389
    • Nan, X.1    Ng, H.-H.2    Johnson, C.A.3    Laherty, C.D.4    Turner, B.M.5    Eisenman, R.N.6    Bird, A.7
  • 66
    • 0020407569 scopus 로고
    • A major developmental transition in early Xenopus embryos: I. Characterization and timing of cellular changes at the midblastula stage
    • Newport J, Kirschner M. 1982a. A major developmental transition in early Xenopus embryos: I. Characterization and timing of cellular changes at the midblastula stage. Cell 30: 675-686. (Pubitemid 13204657)
    • (1982) Cell , vol.30 , Issue.3 , pp. 675-686
    • Newport, J.1    Kirschner, M.2
  • 67
    • 0020460737 scopus 로고
    • A major developmental transition in early Xenopus embryos: II. Control of the onset of transcription
    • Newport J, Kirschner M. 1982b. A major developmental transition in early Xenopus embryos: II. Control of the onset of transcription. Cell 30: 687-696. (Pubitemid 13204658)
    • (1982) Cell , vol.30 , Issue.3 , pp. 687-696
    • Newport, J.1    Kirschner, M.2
  • 68
    • 0033615717 scopus 로고    scopus 로고
    • DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development
    • DOI 10.1016/S0092-8674(00)81656-6
    • Okano M, Bell DW, Haber DA, Li E. 1999. DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development. Cell 99: 247-257. (Pubitemid 29519904)
    • (1999) Cell , vol.99 , Issue.3 , pp. 247-257
    • Okano, M.1    Bell, D.W.2    Haber, D.A.3    Li, E.4
  • 71
    • 0034625064 scopus 로고    scopus 로고
    • Non-CpG methylation is prevalent in embryonic stem cells and may be mediated by DNA methyltransferase 3a
    • Ramsahoye BH, Biniszkiewicz D, Lyko F, Clark V, Bird AP, Jaenisch R. 2000. Non-CpG methylation is prevalent in embryonic stem cells and may be mediated by DNA methyltransferase 3a. Proc Natl Acad Sci 97: 5237-5242.
    • (2000) Proc Natl Acad Sci , vol.97 , pp. 5237-5242
    • Ramsahoye, B.H.1    Biniszkiewicz, D.2    Lyko, F.3    Clark, V.4    Bird, A.P.5    Jaenisch, R.6
  • 72
    • 73449144780 scopus 로고    scopus 로고
    • Targeting of EZH2 to a defined genomic site is sufficient for recruitment of Dnmt3a but not de novo DNA methylation
    • Rush M, Appanah R, Lee S, LamLL, Goyal P, Lorincz MC. 2009. Targeting of EZH2 to a defined genomic site is sufficient for recruitment of Dnmt3a but not de novo DNA methylation. Epigenetics 4: 404-414.
    • (2009) Epigenetics , vol.4 , pp. 404-414
    • Rush, M.1    Appanah, R.2    Lee, S.3    Lam, L.L.4    Goyal, P.5    Lorincz, M.C.6
  • 74
    • 33645284007 scopus 로고    scopus 로고
    • Methylation of endogenous human retroelements in health and disease
    • DNA Methylation: Development, Genetic Disease and Cancer
    • Schulz WA, Steinhoff C, Florl AR. 2006. Methylation of endogenous human retroelements in health and disease. Curr Top Microbiol Immunol 310: 211-250. (Pubitemid 47400292)
    • (2006) Current Topics in Microbiology and Immunology , vol.310 , pp. 211-250
    • Schulz, W.A.1    Steinhoff, C.2    Florl, A.R.3
  • 76
    • 77449127799 scopus 로고    scopus 로고
    • MBD-isolated genome sequencing provides a high-throughput and comprehensive survey of DNA methylation in the human genome
    • Serre D, Lee BH, Ting AH. 2009. MBD-isolated genome sequencing provides a high-throughput and comprehensive survey of DNA methylation in the human genome. Nucleic Acids Res 38:391-399.
    • (2009) Nucleic Acids Res , vol.38 , pp. 391-399
    • Serre, D.1    Lee, B.H.2    Ting, A.H.3
  • 77
    • 0035072804 scopus 로고    scopus 로고
    • Molecular genetics of Rett syndrome and clinical spectrum of MECP2 mutations
    • DOI 10.1097/00019052-200104000-00006
    • Shahbazian MD, Zoghbi HY. 2001. Molecular genetics of Rett syndrome and clinical spectrum of MECP2 mutations. Curr Opin Neurol 14: 171-176. (Pubitemid 32281269)
    • (2001) Current Opinion in Neurology , vol.14 , Issue.2 , pp. 171-176
    • Shahbazian, M.D.1    Zoghbi, H.Y.2
  • 78
    • 0343485074 scopus 로고    scopus 로고
    • Transient depletion of xDnmt1 leads to premature gene activation in Xenopus embryos
    • Stancheva I, Meehan RR. 2000. Transient depletion of xDnmt1 leads to premature gene activation in Xenopus embryos. Genes Dev 14: 313-327. (Pubitemid 30106486)
    • (2000) Genes and Development , vol.14 , Issue.3 , pp. 313-327
    • Stancheva, I.1    Median, R.R.2
  • 79
    • 0035901498 scopus 로고    scopus 로고
    • Loss of the maintenance methyltransferase, xDnmt1, induces apoptosis in Xenopus embryos
    • DOI 10.1093/emboj/20.8.1963
    • Stancheva I, Hensey C, Meehan RR. 2001. Loss of the maintenance methyltransferase, xDnmt1, induces apoptosis in Xenopus embryos. EMBO J 20: 1963-1973. (Pubitemid 32397398)
    • (2001) EMBO Journal , vol.20 , Issue.8 , pp. 1963-1973
    • Stancheva, I.1    Hensey, C.2    Meehan, R.R.3
  • 80
    • 0036499523 scopus 로고    scopus 로고
    • DNA methylation at promoter regions regulates the timing of gene activation in Xenopus laevis embryos
    • DOI 10.1006/dbio.2001.0560
    • Stancheva I, El-Maarri O, Walter J, Niveleau A, Meehan RR. 2002. DNA methylation at promoter regions regulates the timing of gene activation in Xenopus laevis embryos. Dev Biol 243: 155-165. (Pubitemid 34208410)
    • (2002) Developmental Biology , vol.243 , Issue.1 , pp. 155-165
    • Stancheva, I.1    El-Maarri, O.2    Walter, J.3    Niveleau, A.4    Meehan, R.R.5
  • 81
    • 0043178993 scopus 로고    scopus 로고
    • A mutant form of MeCP2 protein associated with human Rett syndrome cannot be displaced from methylated DNA by Notch in Xenopus embryos
    • DOI 10.1016/S1097-2765(03)00276-4
    • Stancheva I, Collins AL, Van den Veyver IB, Zoghbi H, Meehan RR. 2003. A mutant form of MECP2 protein associated with human Rett syndrome cannot be displaced from methylated DNA by notch in Xenopus embryos. Mol Cell 12: 425-435. (Pubitemid 37238929)
    • (2003) Molecular Cell , vol.12 , Issue.2 , pp. 425-435
    • Stancheva, I.1    Collins, A.L.2    Van Den, V.I.B.3    Zoghbi, H.4    Meehan, R.R.5
  • 89
    • 12344310187 scopus 로고    scopus 로고
    • Early embryonic gene transcription in Xenopus
    • Veenstra GJ. 2002. Early embryonic gene transcription in Xenopus. Adv Dev Biol 12: 85-105.
    • (2002) Adv Dev Biol , vol.12 , pp. 85-105
    • Veenstra, G.J.1
  • 91
    • 0033513096 scopus 로고    scopus 로고
    • Translation of maternal TATA-binding protein mRNA potentiates basal but not activated transcription in Xenopus embryos at the midblastula transition
    • Veenstra GJ, Destree OH, Wolffe AP. 1999. Translation of maternal TATA-binding protein mRNA potentiates basal but not activated transcription in Xenopus embryos at the midblastula transition. Mol Cell Biol 19: 7972-7982. (Pubitemid 30413992)
    • (1999) Molecular and Cellular Biology , vol.19 , Issue.12 , pp. 7972-7982
    • Veenstra, G.J.C.1    Destree, O.H.J.2    Wolffe, A.P.3
  • 94
    • 0032845039 scopus 로고    scopus 로고
    • Mi-2 complex couples DNA methylation to chromatin remodelling and histone deacetylation
    • DOI 10.1038/12664
    • Wade PA, Gegonne A, Jones PL, Ballestar E, Aubry F, Wolffe AP. 1999. Mi-2 complex couples DNA methylation to chromatin remodelling and histone deacetylation. Nat Genet 23: 62-66. (Pubitemid 29418789)
    • (1999) Nature Genetics , vol.23 , Issue.1 , pp. 62-66
    • Wade, P.A.1    Gegonne, A.2    Jones, P.L.3    Ballestar, E.4    Aubry, F.5    Wolffe, A.P.6
  • 95
    • 34250188803 scopus 로고    scopus 로고
    • Genomic patterns of DNA methylation: targets and function of an epigenetic mark
    • DOI 10.1016/j.ceb.2007.04.011, PII S0955067407000634, Nucleus and Gene Expression
    • Weber M, Schubeler D. 2007. Genomic patterns of DNA methylation: targets and function of an epigenetic mark. Curr Opin Cell Biol 19: 273-280. (Pubitemid 46899512)
    • (2007) Current Opinion in Cell Biology , vol.19 , Issue.3 , pp. 273-280
    • Weber, M.1    Schubeler, D.2
  • 96
    • 23044514626 scopus 로고    scopus 로고
    • Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells
    • DOI 10.1038/ng1598
    • Weber M, Davies JJ, Wittig D, Oakeley EJ, Haase M, Lam WL, Schubeler D. 2005. Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells. Nat Genet 37: 853-862. (Pubitemid 41077111)
    • (2005) Nature Genetics , vol.37 , Issue.8 , pp. 853-862
    • Weber, M.1    Davies, J.J.2    Wittig, D.3    Oakeley, E.J.4    Haase, M.5    Lam, W.L.6    Schubeler, D.7
  • 97
    • 20444417108 scopus 로고    scopus 로고
    • WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development
    • DOI 10.1016/j.cell.2005.03.036, PII S0092867405003557
    • Wysocka J, Swigut T, Milne TA, Dou Y, Zhang X, Burlingame AL, Roeder RG, Brivanlou AH, Allis CD. 2005. WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development. Cell 121: 859-872. (Pubitemid 40806418)
    • (2005) Cell , vol.121 , Issue.6 , pp. 859-872
    • Wysocka, J.1    Swigut, T.2    Milne, T.A.3    Dou, Y.4    Zhang, X.5    Burlingame, A.L.6    Roeder, R.G.7    Brivanlou, A.H.8    Allis, C.D.9
  • 98
    • 0033525919 scopus 로고    scopus 로고
    • Spatiotemporal, allelic, and enforced expression of Ximpact, the Xenopus homolog of mouse imprinted gene Impact
    • DOI 10.1006/bbrc.1999.0297
    • Yamada Y, Hagiwara Y, Shiokawa K, Sakaki Y, Ito T. 1999. Spatiotemporal, allelic, and enforced expression of Ximpact, the Xenopus homolog of mouse imprinted gene impact. Biochem Biophys Res Commun 256: 162-169. (Pubitemid 29298935)
    • (1999) Biochemical and Biophysical Research Communications , vol.256 , Issue.1 , pp. 162-169
    • Yamada, Y.1    Hagiwara, Y.2    Shiokawa, K.3    Sakaki, Y.4    Ito, T.5
  • 99
    • 0033180082 scopus 로고    scopus 로고
    • Analysis of the NuRD subunits reveals a histone deacetylase core complex and a connection with DNA methylation
    • Zhang Y, Ng HH, Erdjument-Bromage H, Tempst P, Bird A, Reinberg D. 1999. Analysis of the NuRD subunits reveals a histone deacetylase core complex and a connection with DNA methylation. Genes Dev 13: 1924-1935. (Pubitemid 29407360)
    • (1999) Genes and Development , vol.13 , Issue.15 , pp. 1924-1935
    • Zhang, Y.1    Ng, H.-H.2    Erdjument-Bromage, H.3    Tempst, P.4    Bird, A.5    Reinberg, D.6
  • 101
    • 33845880624 scopus 로고    scopus 로고
    • Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription
    • DOI 10.1038/ng1929, PII NG1929
    • Zilberman D, Gehring M, Tran RK, Ballinger T, Henikoff S. 2007. Genomewide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription. Nat Genet 39: 61-69. (Pubitemid 46026502)
    • (2007) Nature Genetics , vol.39 , Issue.1 , pp. 61-69
    • Zilberman, D.1    Gehring, M.2    Tran, R.K.3    Ballinger, T.4    Henikoff, S.5


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