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Volumn 17, Issue 6, 2007, Pages 960-964

A framework for collaborative analysis of ENCODE data: Making large-scale analyses biologist-friendly

Author keywords

[No Author keywords available]

Indexed keywords

ANALYTIC METHOD; ARTICLE; CHROMOSOME SUBSTITUTION; COMPUTER PROGRAM; CONCEPTUAL FRAMEWORK; DNA STRUCTURE; EVOLUTIONARY ALGORITHM; GENE SEQUENCE; GENETIC ALGORITHM; GENETIC DATABASE; GENETIC TRANSCRIPTION; GENOMICS; INFORMATION PROCESSING; PRIORITY JOURNAL; PUBLICATION; STANDARDIZATION; WEB BROWSER;

EID: 34250376884     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.5578007     Document Type: Article
Times cited : (120)

References (16)
  • 1
    • 2942526369 scopus 로고    scopus 로고
    • Male-biased mutation rate and divergence in autosomal, z-linked and w-linked introns of chicken and turkey
    • Axelsson, E., Smith, N.G., Sundstrom, H., Berlin, S., and Ellegren, H. 2004. Male-biased mutation rate and divergence in autosomal, z-linked and w-linked introns of chicken and turkey. Mol. Biol. Evol. 21: 1538-1547.
    • (2004) Mol. Biol. Evol , vol.21 , pp. 1538-1547
    • Axelsson, E.1    Smith, N.G.2    Sundstrom, H.3    Berlin, S.4    Ellegren, H.5
  • 2
    • 33745129751 scopus 로고    scopus 로고
    • Conservation and functional significance of gene topology in the genome of Caenorhabditis elegans
    • Chen, N. and Stein, L.D. 2006. Conservation and functional significance of gene topology in the genome of Caenorhabditis elegans. Genome Res. 16: 606-617.
    • (2006) Genome Res , vol.16 , pp. 606-617
    • Chen, N.1    Stein, L.D.2
  • 4
    • 24344500211 scopus 로고    scopus 로고
    • Initial sequence of the chimpanzee genome and comparison with the human genome
    • The Chimpanzee Sequencing and Analysis Consortium
    • The Chimpanzee Sequencing and Analysis Consortium. 2005. Initial sequence of the chimpanzee genome and comparison with the human genome. Nature 437: 69-87.
    • (2005) Nature , vol.437 , pp. 69-87
  • 5
    • 7444260846 scopus 로고    scopus 로고
    • The ENCODE (ENCyclopedia Of DNA Elements) Project
    • The ENCODE Project Consortium
    • The ENCODE Project Consortium. 2004. The ENCODE (ENCyclopedia Of DNA Elements) Project. Science 306: 636-640.
    • (2004) Science , vol.306 , pp. 636-640
  • 10
    • 23744493161 scopus 로고    scopus 로고
    • Evaluation of regulatory potential and conservation scores for detecting cis-regulatory modules in aligned mammalian genome sequences
    • King, D.C., Taylor, J., Elnitski, L., Chiaromonte, F., Miller, W., and Hardison, R.C. 2005. Evaluation of regulatory potential and conservation scores for detecting cis-regulatory modules in aligned mammalian genome sequences. Genome Res. 15: 1051-1060.
    • (2005) Genome Res , vol.15 , pp. 1051-1060
    • King, D.C.1    Taylor, J.2    Elnitski, L.3    Chiaromonte, F.4    Miller, W.5    Hardison, R.C.6
  • 12
    • 15844406550 scopus 로고    scopus 로고
    • HyPhy: Hypothesis testing using phylogenies
    • Pond, S.L., Frost, S.D., and Muse, S.V. 2005. HyPhy: Hypothesis testing using phylogenies. Bioinformatics 21: 676-679.
    • (2005) Bioinformatics , vol.21 , pp. 676-679
    • Pond, S.L.1    Frost, S.D.2    Muse, S.V.3
  • 13
    • 0025267792 scopus 로고
    • The general stochastic model of nucleotide substitution
    • Rodriguez, F., Oliver, J.L., Marin, A., and Medina, J.R. 1990. The general stochastic model of nucleotide substitution. J. Theor. Biol. 142: 485-501.
    • (1990) J. Theor. Biol , vol.142 , pp. 485-501
    • Rodriguez, F.1    Oliver, J.L.2    Marin, A.3    Medina, J.R.4
  • 14
    • 1542537849 scopus 로고    scopus 로고
    • Combining phylogenetic and hidden Markov models in biosequence analysis
    • Siepel, A. and Haussler, D. 2004. Combining phylogenetic and hidden Markov models in biosequence analysis. J. Comput. Biol. 11: 413-428.
    • (2004) J. Comput. Biol , vol.11 , pp. 413-428
    • Siepel, A.1    Haussler, D.2
  • 16
    • 0028267146 scopus 로고
    • Comparison of models for nucleotide substitution used in maximum-likelihood phylogenetic estimation
    • Yang, Z., Goldman, N., and Friday, A. 1994. Comparison of models for nucleotide substitution used in maximum-likelihood phylogenetic estimation. Mol. Biol. Evol. 11: 316-324.
    • (1994) Mol. Biol. Evol , vol.11 , pp. 316-324
    • Yang, Z.1    Goldman, N.2    Friday, A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.