메뉴 건너뛰기




Volumn 39, Issue 8, 2011, Pages 3482-3495

Unexpected origins of the enhanced pairing affinity of 2'-fluoro-modified RNA

Author keywords

[No Author keywords available]

Indexed keywords

2' DEOXY 2' FLUORO RNA; COMPLEMENTARY RNA; SMALL INTERFERING RNA; UNCLASSIFIED DRUG;

EID: 79955615650     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkq1270     Document Type: Article
Times cited : (147)

References (73)
  • 2
    • 49449097238 scopus 로고    scopus 로고
    • The many roles for fluorine in medicinal chemistry
    • Hagmann, W.K. (2008) The many roles for fluorine in medicinal chemistry. J. Med. Chem., 51, 4359-4369.
    • (2008) J. Med. Chem. , vol.51 , pp. 4359-4369
    • Hagmann, W.K.1
  • 3
    • 0026337408 scopus 로고
    • Kinetic characterization of ribonuclease-resistant 2′-modified hammerhead ribozymes
    • Pieken, W.A., Olsen, D.B., Benseler, F., Aurup, H. and Eckstein, F. (1991) Kinetic characterization of ribonuclease-resistant 2'-modified hammerhead ribozymes. Science, 253, 314-317. (Pubitemid 21917156)
    • (1991) Science , vol.253 , Issue.5017 , pp. 314-317
    • Pieken, W.A.1    Olsen, D.B.2    Benseler, F.3    Aurup, H.4    Eckstein, F.5
  • 4
    • 0025762698 scopus 로고
    • Properties of 2'-fluorothymidine-containing oligonucleotides: Interaction with restriction endonuclease EcoRV
    • Williams, D.M., Benseler, F. and Eckstein, F. (1991) Properties of 2'-fluorothymidine-containing oligonucleotides: interaction with restriction endonuclease EcoRV. Biochemistry, 30, 4001-4009.
    • (1991) Biochemistry , vol.30 , pp. 4001-4009
    • Williams, D.M.1    Benseler, F.2    Eckstein, F.3
  • 5
    • 0027479864 scopus 로고
    • Uniformly modified 2'-deoxy-2'-fluoro phosphorothioate oligonucleotides as nuclease-resistant antisense compounds with high affinity and specificity for RNA targets
    • Kawasaki A.M., Casper, M., Freier, S.M., Lesnik, EA., Zounes, M.C., Cummins, L.L., Gonzalez, C. and Cook, P.D. (1993) Uniformly modified 2'-deoxy-2'-fluoro-phosphorothioate oligonucleotides as nuclease-resistant antisense compounds with high affinity and specificity for RNA targets. J. Med. Chem., 36, 831-841. (Pubitemid 23118776)
    • (1993) Journal of Medicinal Chemistry , vol.36 , Issue.7 , pp. 831-841
    • Kawasaki, A.M.1    Casper, M.D.2    Freier, S.M.3    Lesnik, E.A.4    Zounes, M.C.5    Cummins, L.L.6    Gonzalez, C.7    Cook, P.D.8
  • 7
    • 67650519133 scopus 로고    scopus 로고
    • The RNA-induced silencing complex: A versatile gene-silencing machine
    • Pratt, A.J. and MacRae, I.J. (2009) The RNA-induced silencing complex: a versatile gene-silencing machine. J. Biol. Chem., 284, 17897-17901.
    • (2009) J. Biol. Chem. , vol.284 , pp. 17897-17901
    • Pratt, A.J.1    MacRae, I.J.2
  • 10
    • 4444302947 scopus 로고    scopus 로고
    • Crystal structure of argonaute and its implications for RISC slicer activity
    • DOI 10.1126/science.1102514
    • Song, J.J., Smith, S.K., Hannon, GJ. and Joshua-Tor, L. (2004) Crystal structure of Argonaute and its implications for RISC slicer activity. Science, 305, 1434-1437. (Pubitemid 39167656)
    • (2004) Science , vol.305 , Issue.5689 , pp. 1434-1437
    • Song, J.-J.1    Smith, S.K.2    Hannon, G.J.3    Joshua-Tor, L.4
  • 11
    • 0038385504 scopus 로고    scopus 로고
    • RNA interference in mammalian cells by chemically-modified RNA
    • DOI 10.1021/bi0343774
    • Braasch, DA., Jensen, S., Liu, Y., Kaur, K., Arar, K., White, MA. and Corey, D.R. (2003) RNA interference in mammalian cells by chemically-modified RNA. Biochemistry, 42, 7967-7975. (Pubitemid 36807714)
    • (2003) Biochemistry , vol.42 , Issue.26 , pp. 7967-7975
    • Braasch, D.A.1    Jensen, S.2    Liu, Y.3    Kaur, K.4    Arar, K.5    White, M.A.6    Corey, D.R.7
  • 12
    • 0041331496 scopus 로고    scopus 로고
    • siRNA function in RNAi: A chemical modification analysis
    • DOI 10.1261/rna.5103703
    • Chiu, Y.L. and Rana, T.M. (2003) siRNA function in RNAi: a chemical modification analysis. RNA, 9, 1034-1048. (Pubitemid 37093614)
    • (2003) RNA , vol.9 , Issue.9 , pp. 1034-1048
    • Chiu, Y.-L.1    Rana, T.M.2
  • 13
    • 24344500241 scopus 로고    scopus 로고
    • Sequence, chemical, and structural variation of small interfering RNAs and short hairpin RNAs and the effect on mammalian gene silencing
    • Harborth, J., Elbashir, S.M., Vandenburgh, K., Manninga, H., Scaringe, SA., Weber, K. and Tuschl, T. (2003) Sequence, chemical, and structural variation of small interfering RNAs and short hairpin RNAs and the effect on mammalian gene silencing. Antisense Nucleic Acid Drug Dev., 132, 83-105.
    • (2003) Antisense Nucleic Acid Drug Dev. , vol.132 , pp. 83-105
    • Harborth, J.1    Elbashir, S.M.2    Vandenburgh, K.3    Manninga, H.4    Scaringe, S.A.5    Weber, K.6    Tuschl, T.7
  • 16
    • 1942533474 scopus 로고    scopus 로고
    • In vivo activity of nuclease-resistant siRNAs
    • DOI 10.1261/rna.5239604
    • Layzer, J.M., McCaffrey, A.P., Tanner, A.K., Huang, Z., Kay, MA. and Sullenger, BA. (2004) In vivo activity of nuclease-resistant siRNAs. RNA, 10, 766-771. (Pubitemid 38529739)
    • (2004) RNA , vol.10 , Issue.5 , pp. 766-771
    • Layzer, J.M.1    McCaffrey, A.P.2    Tanner, A.K.3    Huang, Z.4    Kay, M.A.5    Sullenger, B.A.6
  • 21
    • 51849089779 scopus 로고    scopus 로고
    • Molecular imaging study on in vivo distribution and pharmacokinetics of modified small interfering RNAs (siRNAs)
    • Viel, T., Boisgard, R., Kuhnast, B., Jego, B., Siquier-Pernet, K., Hinnen, F., Dolle, F. and Tavitian, B. (2008) Molecular imaging study on in vivo distribution and pharmacokinetics of modified small interfering RNAs (siRNAs). Oligonucleotides, 18, 201-212.
    • (2008) Oligonucleotides , vol.18 , pp. 201-212
    • Viel, T.1    Boisgard, R.2    Kuhnast, B.3    Jego, B.4    Siquier-Pernet, K.5    Hinnen, F.6    Dolle, F.7    Tavitian, B.8
  • 23
    • 0034851253 scopus 로고    scopus 로고
    • The TF:VIIa complex: Clinical significance, structure-function relationships and its role in signaling and metastasis
    • Konigsberg, W., Kirchhofer, D., Riederer, MA. and Nemerson, Y. (2002) The TF:VIIa complex: clinical significance, structure-function relationships and its role in signaling and metastasis. Thromb. Haemost., 86, 757-771. (Pubitemid 32834183)
    • (2001) Thrombosis and Haemostasis , vol.86 , Issue.3 , pp. 757-771
    • Konigsberg, W.1    Kirchhofer, D.2    Riederer, M.A.3    Nemerson, Y.4
  • 24
    • 1842842099 scopus 로고    scopus 로고
    • Tissue factor VIIa in thrombosis and cancer
    • Mousa, SA. (2004) Tissue factor VIIa in thrombosis and cancer. Methods Mol. Med., 93, 119-132.
    • (2004) Methods Mol. Med. , vol.93 , pp. 119-132
    • Mousa, S.A.1
  • 25
    • 0037567437 scopus 로고    scopus 로고
    • Tissue factor/factor VIIa inhibitors block angiogenesis and tumor growth through a nonhemostatic mechanism
    • Hembrough, TA., Swartz, G.M., Papathanassiu, A., Vlasuk, GP., Rote, W.E., Green, S.J. and Pribluda, V.S. (2003) Tissue factor VIIa inhibitors block angiogenesis and tumor growth through a nonhemostatic mechanism. Cancer Res., 63, 2997-3000. (Pubitemid 36667175)
    • (2003) Cancer Research , vol.63 , Issue.11 , pp. 2997-3000
    • Hembrough, T.A.1    Swartz, G.M.2    Papathanassiu, A.3    Vlasuk, G.P.4    Rote, W.E.5    Green, S.J.6    Pribluda, V.S.7
  • 27
    • 58849160498 scopus 로고    scopus 로고
    • RNAPc2 inhibits colorectal cancer in mice through tissue factor
    • Zhao, J., Aguilar, G, Palencia, S., Newton, E. and Abo, A. (2009) rNAPc2 inhibits colorectal cancer in mice through tissue factor. Clin. Cancer Res., 15, 208-216.
    • (2009) Clin. Cancer Res. , vol.15 , pp. 208-216
    • Zhao, J.1    Aguilar, G.2    Palencia, S.3    Newton, E.4    Abo, A.5
  • 29
    • 33644860608 scopus 로고    scopus 로고
    • Fully 2'-modified oligonucleotide duplexes with improved in vitro potency and stability compared to unmodified small interfering RNA
    • Dande, P., Prakash, T.P., Siouf, N., Gaus, H., Jarre, R., Berdeja, A., Swayze, E.E., Griffey, R.H. and Bhat, B. (2006) Fully 2'-modified oligonucleotide duplexes with improved in vitro potency and stability compared to unmodified small interfering RNA. J. Med. Chem., 49, 1624-1634.
    • (2006) J. Med. Chem. , vol.49 , pp. 1624-1634
    • Dande, P.1    Prakash, T.P.2    Siouf, N.3    Gaus, H.4    Jarre, R.5    Berdeja, A.6    Swayze, E.E.7    Griffey, R.H.8    Bhat, B.9
  • 31
    • 0024804759 scopus 로고
    • Absorbance melting curves of RNA
    • DOI 10.1016/0076-6879(89)80108-9
    • Puglisi, J.D. and Tinoco, I. Jr (1989) Absorbance melting curves of RNA. Methods Enzymol., 180, 304-325. (Pubitemid 20039582)
    • (1989) Methods in Enzymology , vol.180 , pp. 304-325
    • Puglisi, J.D.1    Tinoco Jr., I.2
  • 32
    • 0029100232 scopus 로고
    • Extracting thermodynamic data from equilibrium melting curves for oligonucleotide order-disorder transitions
    • Breslauer, K.J. (1995) Extracting thermodynamic data from equilibrium melting curves for oligonucleotide order-disorder transitions. Methods Enzymol., 259, 221-242.
    • (1995) Methods Enzymol. , vol.259 , pp. 221-242
    • Breslauer, K.J.1
  • 33
    • 1242264497 scopus 로고    scopus 로고
    • Hydration of short DNA, RNA and 2′-Ome oligonucleotides determined by osmotic stressing
    • DOI 10.1093/nar/gkh175
    • Rozners, E. and Moulder, J. (2004) Hydration of short DNA, RNA, and 2'-OMe oligonucleotides determined by osmotic stressing. Nucleic Acids Res., 32, 248-254. (Pubitemid 38228623)
    • (2004) Nucleic Acids Research , vol.32 , Issue.1 , pp. 248-254
    • Rozners, E.1    Moulder, J.2
  • 34
    • 0033524401 scopus 로고    scopus 로고
    • Effects of hydration, ion release, and excluded volume on the melting of triplex and duplex DNA
    • DOI 10.1021/bi9820154
    • Spink, C.H. and Chaires, J.B. (1999) Effects of hydration, ion release, and excluded volume on the melting of triplex and duplex DNA. Biochemistry, 38, 496-508. (Pubitemid 29035721)
    • (1999) Biochemistry , vol.38 , Issue.1 , pp. 496-508
    • Spink, C.H.1    Chaires, J.B.2
  • 35
    • 70350048456 scopus 로고    scopus 로고
    • Interplay of structure, hydration and thermal stability in formacetal modified oligonucleotides: RNA may tolerate nonionic modifications better than DNA
    • Kolarovic, A., Schweizer, E., Greene, E., Gironda, M., Pallan, P.S., Egli, M. and Rozners, E. (2009) Interplay of structure, hydration and thermal stability in formacetal modified oligonucleotides: RNA may tolerate nonionic modifications better than DNA. J. Am. Chem. Soc., 131, 14932-14937.
    • (2009) J. Am. Chem. Soc. , vol.131 , pp. 14932-14937
    • Kolarovic, A.1    Schweizer, E.2    Greene, E.3    Gironda, M.4    Pallan, P.S.5    Egli, M.6    Rozners, E.7
  • 36
    • 36148961231 scopus 로고    scopus 로고
    • Crystal structure, stability and in vitro RNAi activity of oligoribonucleotides containing the ribo-difluorotoluyl nucleotide: Insights into substrate requirements by the human RISC Ago2 enzyme
    • DOI 10.1093/nar/gkm664
    • Li, F., Pallan, P.S., Maier, MA., Rajeev, KG., Mathieu, S.L., Kreutz, C., Fan, Y., Sanghvi, J., Micura, R., Rozners, E. et al. (2007) Crystal structure, stability and in vitro RNAi activity of oligoribonucleotides containing the ribo-difluorotoluyl nucleotide: insights into substrate requirements by the human RISC Ago2 enzyme. Nucleic Acids Res., 35, 6424-6438. (Pubitemid 350111612)
    • (2007) Nucleic Acids Research , vol.35 , Issue.19 , pp. 6424-6438
    • Li, F.1    Pallan, P.S.2    Maier, M.A.3    Rajeev, K.G.4    Mathieu, S.I.5    Kreutz, C.6    Fan, Y.7    Sanghvi, J.8    Micura, R.9    Rozners, E.10    Manoharan, M.11    Egli, M.12
  • 37
    • 29744463877 scopus 로고    scopus 로고
    • Expanding functionality of RNA: Synthesis and properties of RNA containing imidazole modified tandem G-U wobble base pairs
    • DOI 10.1039/b510846b
    • Rozners, E., Smicius, R. and Uchiyama, C (2005) Expanding functionality of RNA: synthesis and properties of RNA containing imidazole modified tandem G-U wobble base pairs. Chem. Commun., 5778-5780. (Pubitemid 43028752)
    • (2005) Chemical Communications , Issue.46 , pp. 5778-5780
    • Rozners, E.1    Smicius, R.2    Uchiyama, C.3
  • 38
    • 79953285351 scopus 로고    scopus 로고
    • Determination of nucleic acid hydration using osmotic stress
    • Rozners, E. (2010) Determination of nucleic acid hydration using osmotic stress. Curr. Protoc Nucleic Acid Chem., 7.14.1-7.4.13.
    • (2010) Curr. Protoc Nucleic Acid Chem. , pp. 7141-7413
    • Rozners, E.1
  • 40
    • 0031059866 scopus 로고    scopus 로고
    • Processing of X-ray diffraction data collected in oscillation mode
    • DOI 10.1016/S0076-6879(97)76066-X
    • Otwinowski, Z. and Minor, W. (1997) Processing of X-ray diffraction data collected in oscillation mode. Meth. Enzymol., 276, 307-326. (Pubitemid 27085611)
    • (1997) Methods in Enzymology , vol.276 , pp. 307-326
    • Otwinowski, Z.1    Minor, W.2
  • 41
    • 4644366388 scopus 로고    scopus 로고
    • HKL2MAP: A graphical user interface for macromolecular phasing with SHELX programs
    • Pape, T. and Schneider, T.R. (2004) HKL2MAP: a graphical user interface for macromolecular phasing with SHELX programs. J. Appl. Cryst., 37, 843-844.
    • (2004) J. Appl. Cryst. , vol.37 , pp. 843-844
    • Pape, T.1    Schneider, T.R.2
  • 44
    • 0030880598 scopus 로고    scopus 로고
    • SHELXL: High resolution refinement
    • Sheldrick, GM. and Schneider, T.R. (1997) SHELXL: high resolution refinement. Meth. Enzymol., 277, 319-343.
    • (1997) Meth. Enzymol. , vol.277 , pp. 319-343
    • Sheldrick, G.M.1    Schneider, T.R.2
  • 45
    • 0026597444 scopus 로고
    • Free R value: A novel statistical quantity for assessing the accuracy of crystal structures
    • Brunger, A.T. (1992) Free R value: a novel statistical quantity for assessing the accuracy of crystal structures. Nature, 355, 472-475.
    • (1992) Nature , vol.355 , pp. 472-475
    • Brunger, A.T.1
  • 46
    • 0024539180 scopus 로고
    • Defining the structure of irregular nucleic acids: Conventions and principles
    • Lavery, R. and Sklenar, H. (1989) Defining the structure of irregular nucleic acids: conventions and principles. J. Biomol. Struct. Dyn., 6, 655-667. (Pubitemid 19079752)
    • (1989) Journal of Biomolecular Structure and Dynamics , vol.6 , Issue.4 , pp. 655-667
    • Lavery, R.1    Sklenar, H.2
  • 47
    • 0000560808 scopus 로고    scopus 로고
    • MOLREP: An automated program for molecular replacement
    • Vagin, A. and Teplyakov, A. (1997) MOLREP: an automated program for molecular replacement. J. Appl. Cryst., 30, 1022-1025. (Pubitemid 127485985)
    • (1997) Journal of Applied Crystallography , vol.30 , Issue.6 , pp. 1022-1025
    • Vagin, A.1    Teplyakov, A.2
  • 50
    • 0029956116 scopus 로고    scopus 로고
    • Rna hydration: A detailed look
    • DOI 10.1021/bi9607214
    • Egli, M., Portmann, S. and Usman, N. (1996) RNA hydration: a detailed look. Biochemistry, 35, 8489-8494. (Pubitemid 26240182)
    • (1996) Biochemistry , vol.35 , Issue.26 , pp. 8489-8494
    • Egli, M.1    Portmann, S.2    Usman, N.3
  • 51
    • 0000117791 scopus 로고    scopus 로고
    • Structural aspects of nucleic acid analogs and antisense oligonucleotides
    • Egli, M. (1996) Structural aspects of nucleic acid analogs and antisense oligonucleotides. Angew. Chem. Int. Ed., 35, 1894-1909. (Pubitemid 126669259)
    • (1996) Angewandte Chemie (International Edition in English) , vol.35 , Issue.17 , pp. 1894-1909
    • Egli, M.1
  • 53
    • 0034681955 scopus 로고    scopus 로고
    • Vapor pressure osmometry studies of osmolyte-protein interactions: Implications for the action of osmoprotectants in vivo and for the interpretation of 'osmotic stress' experiments in vitro
    • DOI 10.1021/bi992887l
    • Courtenay, E.S., Capp, M.W., Anderson, C.F. and Record, M.T. Jr (2000) Vapor pressure osmometry studies of osmolyte-protein interactions: implications for the action of osmoprotectants in vivo and for the interpretation of "osmotic stress" experiments in vitro. Biochemistry, 39, 4455-4471. (Pubitemid 30212662)
    • (2000) Biochemistry , vol.39 , Issue.15 , pp. 4455-4471
    • Courtenay, E.S.1    Capp, M.W.2    Anderson, C.F.3    Record Jr., M.T.4
  • 55
    • 0029051383 scopus 로고
    • The crystal structure of r(CCCCGGGG) in two distinct lattices
    • Portmann, S., Usman, N. and Egli, M. (1995) The crystal structure of r(CCCCGGGG) in two distinct lattices. Biochemistry, 34, 7569-7575.
    • (1995) Biochemistry , vol.34 , pp. 7569-7575
    • Portmann, S.1    Usman, N.2    Egli, M.3
  • 57
    • 20544433165 scopus 로고
    • Van der Waals volumes and radii
    • Bondi, A. (1964) van der Waals volumes and radii. J. Phys. Chem., 68, 441-451.
    • (1964) J. Phys. Chem. , vol.68 , pp. 441-451
    • Bondi, A.1
  • 59
    • 33748565636 scopus 로고    scopus 로고
    • Molecular pair analysis: C-HF interactions in the crystal structure of fluorobenzene? And related matters
    • DOI 10.1002/chem.200600092
    • Dunitz, J.D. and Schweizer, W.B. (2006) Molecular pair analysis: C-H.F interactions in the crystal structure of fluorobenzene? And related matters. Chem. Europ. J., 12, 6804-6815. (Pubitemid 44369214)
    • (2006) Chemistry - A European Journal , vol.12 , Issue.26 , pp. 6804-6815
    • Dunitz, J.D.1    Schweizer, W.B.2
  • 61
    • 33646127611 scopus 로고    scopus 로고
    • 2005 Award address, Emil Thomas Kaiser award
    • Raines, R.T. (2006) 2005 Award address, Emil Thomas Kaiser award. Protein Sci., 15, 1219-1225.
    • (2006) Protein Sci. , vol.15 , pp. 1219-1225
    • Raines, R.T.1
  • 62
    • 2442533849 scopus 로고    scopus 로고
    • N1N3 Hydrogen Bonds of A:U Base Pairs of RNA Are Stronger than Those of A:T Base Pairs of DNA
    • DOI 10.1021/ja048981t
    • Vakonakis, I. and LiWang, A.C. (2004) N1-N3 hydrogen bonds of A:U base pairs of RNA are stronger than those of A:T base pairs of DNA. J. Am. Chem. Soc., 126, 5688-5689. (Pubitemid 38621406)
    • (2004) Journal of the American Chemical Society , vol.126 , Issue.18 , pp. 5688-5689
    • Vakonakis, I.1    LiWang, A.C.2
  • 63
    • 29844458157 scopus 로고    scopus 로고
    • NH values show that N1N3 hydrogen bonds are stronger in dsRNA A:U than dsDNA A:T base pairs
    • DOI 10.1021/ja055826l
    • Manalo, M.N., Kong, X. and LiWang, A.C. (2005) 1JNH values show that N1?N3 hydrogen bonds are stronger in dsRNA A:U than dsDNA A:T base pairs. J. Am. Chem. Soc., 127, 17974-17975. (Pubitemid 43038439)
    • (2005) Journal of the American Chemical Society , vol.127 , Issue.51 , pp. 17974-17975
    • Manalo, M.N.1    Kong, X.2    LiWang, A.3
  • 64
    • 11244321707 scopus 로고    scopus 로고
    • Hydrogen bonds of RNA are stronger than those of DNA, but NMR monitors only presence of methyl substituent in uracil/thymine
    • DOI 10.1021/ja045276b
    • Swart, M., Fonseca Guerra, C. and Bickelhaupt, F.M. (2004) Hydrogen bonds of RNA are stronger than those of DNA, but NMR monitors only presence of methyl substituent in uracil/thymine. J. Am. Chem. Soc., 126, 16718-16719. (Pubitemid 40069479)
    • (2004) Journal of the American Chemical Society , vol.126 , Issue.51 , pp. 16718-16719
    • Swart, M.1    Guerra, C.F.2    Bickelhaupt, F.M.3
  • 67
    • 35048835853 scopus 로고    scopus 로고
    • Hydrogen-bonding and π-π base-stacking interactions are coupled in DNA, as suggested by calculated and experimental trans-hbond deuterium isotope shifts
    • DOI 10.1021/ja0692940
    • Manalo, M.N., Perez, L.M. and LiWang, A. (2007) Hydrogen bonding and π-π base-stacking interactions are coupled in DNA, as suggested by calculated and experimental trans-Hbond deuterium isotope shifts. J. Am. Chem. Soc., 129, 11298-11299. (Pubitemid 47555525)
    • (2007) Journal of the American Chemical Society , vol.129 , Issue.37 , pp. 11298-11299
    • Manalo, M.N.1    Perez, L.M.2    LiWang, A.3
  • 68
    • 4544278491 scopus 로고    scopus 로고
    • Organic fluorine: Odd man out
    • DOI 10.1002/cbic.200300801
    • Dunitz, J.D. (2004) Organic fluorine: odd man out. Chembiochem, 5, 614-621. (Pubitemid 39257082)
    • (2004) ChemBioChem , vol.5 , Issue.5 , pp. 614-621
    • Dunitz, J.D.1
  • 69
    • 69849102641 scopus 로고    scopus 로고
    • The pairing geometry of the hydrophobic thymine analog 2, 4-difluorotoluene in duplex DNA as analyzed by X-ray crystallography
    • Pallan, P.S. and Egli, M. (2009) The pairing geometry of the hydrophobic thymine analog 2, 4-difluorotoluene in duplex DNA as analyzed by X-ray crystallography. J. Am. Chem. Soc., 131, 12548-12549.
    • (2009) J. Am. Chem. Soc. , vol.131 , pp. 12548-12549
    • Pallan, P.S.1    Egli, M.2
  • 70
    • 33645545684 scopus 로고    scopus 로고
    • 2'-Fluoroarabino-and arabinonucleic acid show different conformations, resulting in deviating RNA affinities and processing of their heteroduplexes with RNA by RNase H
    • Li, F., Sarkhel, S., Wilds, C.J., Wawrzak, Z., Prakash, T.P., Manoharan, M. and Egli, M. (2006) 2'-Fluoroarabino-and arabinonucleic acid show different conformations, resulting in deviating RNA affinities and processing of their heteroduplexes with RNA by RNase H. Biochemistry, 45, 4141-4152.
    • (2006) Biochemistry , vol.45 , pp. 4141-4152
    • Li, F.1    Sarkhel, S.2    Wilds, C.J.3    Wawrzak, Z.4    Prakash, T.P.5    Manoharan, M.6    Egli, M.7
  • 71
    • 37549025441 scopus 로고    scopus 로고
    • Structure and activity of Y-class DNA polymerase Dpo4 from Sulfolobus solfataricus with templates containing the hydrophobic thymine analog 2, 4-difluorotoluene
    • Irimia, A., Eoff, R.L., Pallan, P.S., Guengerich, F.P. and Egli, M. (2007) Structure and activity of Y-class DNA polymerase Dpo4 from Sulfolobus solfataricus with templates containing the hydrophobic thymine analog 2, 4-difluorotoluene. J. Biol. Chem., 282, 36421-36433.
    • (2007) J. Biol. Chem. , vol.282 , pp. 36421-36433
    • Irimia, A.1    Eoff, R.L.2    Pallan, P.S.3    Guengerich, F.P.4    Egli, M.5
  • 73
    • 36148961231 scopus 로고    scopus 로고
    • Crystal structure, stability and in vitro RNAi activity of oligoribonucleotides containing the ribo-difluorotoluyl nucleotide: Insights into substrate requirements by the human RISC Ago2 enzyme
    • DOI 10.1093/nar/gkm664
    • Li, F., Pallan, P.S., Maier, MA., Rajeev, K.G., Mathieu, S.L., Kreutz, C., Fan, Y., Sanghvi, J., Micura, R., Rozners, E. et al. (2007) Crystal structure, stability and in vitro RNAi activity of oligoribonucleotides containing the ribo-difluorotoluyl nucleotide: insights into substrate requirements by the human RISC Ago2 enzyme. Nucleic Acids Res., 35, 6424-6438. (Pubitemid 350111612)
    • (2007) Nucleic Acids Research , vol.35 , Issue.19 , pp. 6424-6438
    • Li, F.1    Pallan, P.S.2    Maier, M.A.3    Rajeev, K.G.4    Mathieu, S.I.5    Kreutz, C.6    Fan, Y.7    Sanghvi, J.8    Micura, R.9    Rozners, E.10    Manoharan, M.11    Egli, M.12


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.