-
1
-
-
3142615372
-
The RNAi revolution
-
Novina,C.D. and Sharp,P.A. (2004) The RNAi revolution. Nature, 430, 161-164.
-
(2004)
Nature
, vol.430
, pp. 161-164
-
-
Novina, C.D.1
Sharp, P.A.2
-
2
-
-
4644336023
-
Revealing the world of RNA interference
-
Mello,C.C. and Conte,D.Jr. (2004) Revealing the world of RNA interference. Nature, 431, 338-342.
-
(2004)
Nature
, vol.431
, pp. 338-342
-
-
Mello, C.C.1
Conte Jr., D.2
-
3
-
-
4644350944
-
Unlocking the potential of the human genome with RNA interference
-
Hannon,G.J. and Rossi,J.J. (2004) Unlocking the potential of the human genome with RNA interference. Nature, 431, 371-378.
-
(2004)
Nature
, vol.431
, pp. 371-378
-
-
Hannon, G.J.1
Rossi, J.J.2
-
4
-
-
0005227608
-
Small interfering RNAs: A revolutionary tool for the analysis of gene function and gene therapy
-
Tuschl,T. and Borkhardt,A. (2002) Small interfering RNAs: A revolutionary tool for the analysis of gene function and gene therapy. Mol. Interv., 2, 158-167.
-
(2002)
Mol. Interv
, vol.2
, pp. 158-167
-
-
Tuschl, T.1
Borkhardt, A.2
-
5
-
-
0032545933
-
Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans
-
Fire,A., Xu,S., Montgomery,M.K., Kostas,S.A., Driver,S.E. and Mello,C.C. (1998) Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature, 391, 806--811.
-
(1998)
Nature
, vol.391
, pp. 806-811
-
-
Fire, A.1
Xu, S.2
Montgomery, M.K.3
Kostas, S.A.4
Driver, S.E.5
Mello, C.C.6
-
6
-
-
0035942736
-
Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells
-
Elbashir,S.M., Harborth,J., Lendeckel,W., Yalcin,A., Weber,K. and Tuschl,T. (2001) Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells. Nature, 411, 494-498.
-
(2001)
Nature
, vol.411
, pp. 494-498
-
-
Elbashir, S.M.1
Harborth, J.2
Lendeckel, W.3
Yalcin, A.4
Weber, K.5
Tuschl, T.6
-
7
-
-
0035863097
-
RNA interference is mediated by 21- and 22-nucleotide RNAs
-
Elbashir,S.M., Lendeckel,W. and Tuschl,T. (2001) RNA interference is mediated by 21- and 22-nucleotide RNAs. Genes Dev., 15, 188-200.
-
(2001)
Genes Dev
, vol.15
, pp. 188-200
-
-
Elbashir, S.M.1
Lendeckel, W.2
Tuschl, T.3
-
8
-
-
0035859929
-
Specific inhibition of gene expression by small double-stranded RNAs in invertebrate and vertebrate systems
-
Caplen,N.J., Parrish,S., Imani,F., Fire,A. and Morgan,R.A. (2001) Specific inhibition of gene expression by small double-stranded RNAs in invertebrate and vertebrate systems. Proc. Natl Acad. Sci. USA, 98, 9742-9747.
-
(2001)
Proc. Natl Acad. Sci. USA
, vol.98
, pp. 9742-9747
-
-
Caplen, N.J.1
Parrish, S.2
Imani, F.3
Fire, A.4
Morgan, R.A.5
-
9
-
-
0035798415
-
ATP requirements and small interfering RNA structure in the RNA interference pathway
-
Nykanen,A., Haley,B. and Zamore,P.D. (2001) ATP requirements and small interfering RNA structure in the RNA interference pathway. Cell, 107, 309-321.
-
(2001)
Cell
, vol.107
, pp. 309-321
-
-
Nykanen, A.1
Haley, B.2
Zamore, P.D.3
-
10
-
-
0037031576
-
Single-stranded antisense siRNAs guide target RNA cleavage in RNAi
-
Martinez,J., Patkaniowska,A., Urlaub,H., Luhrmann,R. and Tuschl,T. (2002) Single-stranded antisense siRNAs guide target RNA cleavage in RNAi. Cell, 110, 563-574.
-
(2002)
Cell
, vol.110
, pp. 563-574
-
-
Martinez, J.1
Patkaniowska, A.2
Urlaub, H.3
Luhrmann, R.4
Tuschl, T.5
-
11
-
-
0036752955
-
Evidence that siRNAs function as guides, not primers, in the Drosophila and human RNAi pathways
-
Schwarz,D.S., Hutvagner,G., Haley,B. and Zamore,P.D. (2002) Evidence that siRNAs function as guides, not primers, in the Drosophila and human RNAi pathways. Mol. Cell, 10, 537-548.
-
(2002)
Mol. Cell
, vol.10
, pp. 537-548
-
-
Schwarz, D.S.1
Hutvagner, G.2
Haley, B.3
Zamore, P.D.4
-
12
-
-
0035803583
-
Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate
-
Elbashir,S.M., Martinez,J., Patkaniowska,A., Lendeckel,W. and Tuschl,T. (2001) Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate. EMBO J., 20, 6877-6888.
-
(2001)
EMBO J
, vol.20
, pp. 6877-6888
-
-
Elbashir, S.M.1
Martinez, J.2
Patkaniowska, A.3
Lendeckel, W.4
Tuschl, T.5
-
13
-
-
0347444723
-
MicroRNAs: Genomics, biogenesis, mechanism, and function
-
Bartel,D.P. (2004) MicroRNAs: Genomics, biogenesis, mechanism, and function. Cell, 116, 281-297.
-
(2004)
Cell
, vol.116
, pp. 281-297
-
-
Bartel, D.P.1
-
14
-
-
4644223259
-
Mechanisms of gene silencing by double-stranded RNA
-
Meister,G. and Tuschl,T. (2004) Mechanisms of gene silencing by double-stranded RNA. Nature, 431, 343-349.
-
(2004)
Nature
, vol.431
, pp. 343-349
-
-
Meister, G.1
Tuschl, T.2
-
16
-
-
3242736704
-
Human Argonaute2 mediates RNA cleavage targeted by miRNAs and siRNAs
-
Meister,G., Landthaler,M., Patkaniowska,A., Dorsett,Y., Teng,G. and Tuschl,T. (2004) Human Argonaute2 mediates RNA cleavage targeted by miRNAs and siRNAs. Mol. Cell, 15, 185-197.
-
(2004)
Mol. Cell
, vol.15
, pp. 185-197
-
-
Meister, G.1
Landthaler, M.2
Patkaniowska, A.3
Dorsett, Y.4
Teng, G.5
Tuschl, T.6
-
17
-
-
4444368187
-
Argonaute2 is the catalytic engine of mammalian RNAi
-
Liu,J., Carmell,M.A., Rivas,F.V., Marsden,C.G., Thomson,J.M., Song,J.J., Hammond,S.M., Joshua-Tor,L. and Hannon,G.J. (2004) Argonaute2 is the catalytic engine of mammalian RNAi. Science, 305 1437-1441.
-
(2004)
Science
, vol.305
, pp. 1437-1441
-
-
Liu, J.1
Carmell, M.A.2
Rivas, F.V.3
Marsden, C.G.4
Thomson, J.M.5
Song, J.J.6
Hammond, S.M.7
Joshua-Tor, L.8
Hannon, G.J.9
-
18
-
-
4444302947
-
Crystal structure of Argonaute and its implications for RISC slicer activity
-
Song,J.J., Smith,S.K., Hannon,G.J. and Joshua-Tor,L. (2004) Crystal structure of Argonaute and its implications for RISC slicer activity. Science, 305, 1434-1437.
-
(2004)
Science
, vol.305
, pp. 1434-1437
-
-
Song, J.J.1
Smith, S.K.2
Hannon, G.J.3
Joshua-Tor, L.4
-
19
-
-
24344500241
-
Sequence, chemical, and structural variation of small Enterfering RNAs and short hairpin RNAs and the effect on mammalian gene silencing
-
Harborth,J., Elbashir,S.M., Vandenburgh,K., Manninga,H., Scaringe,S.A., Weber,K. and Tuschl,T. (2003) Sequence, chemical, and structural variation of small Enterfering RNAs and short hairpin RNAs and the effect on mammalian gene silencing. Antisense Nucleic Acid Drug Dev. 13, 83-105.
-
(2003)
Antisense Nucleic Acid Drug Dev
, vol.13
, pp. 83-105
-
-
Harborth, J.1
Elbashir, S.M.2
Vandenburgh, K.3
Manninga, H.4
Scaringe, S.A.5
Weber, K.6
Tuschl, T.7
-
20
-
-
0037089135
-
Positional effects of short interfering RNAs targeting the human coagulation trigger Tissue Factor
-
Holen,T., Amarzguioui,M., Wiiger,M.T., Babaie,E. and Prydz,H. (2002) Positional effects of short interfering RNAs targeting the human coagulation trigger Tissue Factor. Nucleic Acids Res., 30, 1757-1766.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 1757-1766
-
-
Holen, T.1
Amarzguioui, M.2
Wiiger, M.T.3
Babaie, E.4
Prydz, H.5
-
21
-
-
0042161890
-
The activity of siRNA in mammalian cells is related to structural target accessibility: A comparison with antisense oligonucleotides
-
Kretschmer-Kazemi Far,R. and Sczakiel,G. (2003) The activity of siRNA in mammalian cells is related to structural target accessibility: A comparison with antisense oligonucleotides. Nucleic Acids Res., 31, 4417-4424.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 4417-4424
-
-
Kretschmer-Kazemi Far, R.1
Sczakiel, G.2
-
22
-
-
4344619826
-
Pickine a winner: New mechanistic insights into the design of effective siRNAs
-
Gong,D. and Ferrell,J.E.Jr.(2004) Pickine a winner: New mechanistic insights into the design of effective siRNAs. Trends Biotechnol., 22, 451-454.
-
(2004)
Trends Biotechnol
, vol.22
, pp. 451-454
-
-
Gong, D.1
Ferrell Jr., J.E.2
-
23
-
-
0142165224
-
Functional siRNAs and miRNAs exhibit strand bias
-
Khvorova,A., Reynolds,A. and Jayasena,S.D. (2003) Functional siRNAs and miRNAs exhibit strand bias. Cell, 115, 209-216.
-
(2003)
Cell
, vol.115
, pp. 209-216
-
-
Khvorova, A.1
Reynolds, A.2
Jayasena, S.D.3
-
24
-
-
1542336952
-
Rational siRNA design for RNA interference
-
Reynolds,A., Leake,D., Boese,Q., Scaringe,S., Marshall,W.S. and Khvorova,A. (2004) Rational siRNA design for RNA interference. Nat. Biotechnol., 22, 326-330.
-
(2004)
Nat. Biotechnol
, vol.22
, pp. 326-330
-
-
Reynolds, A.1
Leake, D.2
Boese, Q.3
Scaringe, S.4
Marshall, W.S.5
Khvorova, A.6
-
25
-
-
33747761923
-
On the art of identifying effective and specific siRNAs
-
Pei,Y. and Tuschl,J. (2006) On the art of identifying effective and specific siRNAs. Nat. Methods, 3, 670-676.
-
(2006)
Nat. Methods
, vol.3
, pp. 670-676
-
-
Pei, Y.1
Tuschl, J.2
-
26
-
-
0036811055
-
Effects on RNA interference in gene expression (RNAi) in cultured mammalian cells of mismatches and the introduction of chemical modifications at the 3′-ends of siRNAs
-
Hamada,M., Ohtsuka,T., Kawaida,R., Koizumi,M., Morita,K., Furukawa,H., Imanishi,T., Miyagishi,M. and Taira,K. (2002) Effects on RNA interference in gene expression (RNAi) in cultured mammalian cells of mismatches and the introduction of chemical modifications at the 3′-ends of siRNAs. Antisense Nucleic Acid Drug Dev., 12, 301-309.
-
(2002)
Antisense Nucleic Acid Drug Dev
, vol.12
, pp. 301-309
-
-
Hamada, M.1
Ohtsuka, T.2
Kawaida, R.3
Koizumi, M.4
Morita, K.5
Furukawa, H.6
Imanishi, T.7
Miyagishi, M.8
Taira, K.9
-
27
-
-
10744225153
-
Asymmetry in the assembly of the RNAi enzyme complex
-
Schwarz,D.S., Hutvagner,G., Du,T., Xu,Z., Aronin,N. and Zamore,P.D. (2003) Asymmetry in the assembly of the RNAi enzyme complex. Cell, 115, 199-208.
-
(2003)
Cell
, vol.115
, pp. 199-208
-
-
Schwarz, D.S.1
Hutvagner, G.2
Du, T.3
Xu, Z.4
Aronin, N.5
Zamore, P.D.6
-
28
-
-
0037197914
-
RNA interference by expression of short-interfering RNAs and hairpin RNAs in mammalian cells
-
Yu,J.Y., DeRuiter,S.L. and Turner,D.L. (2002) RNA interference by expression of short-interfering RNAs and hairpin RNAs in mammalian cells. Proc. Natl Acad. Sci. USA, 99, 6047-6052.
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 6047-6052
-
-
Yu, J.Y.1
DeRuiter, S.L.2
Turner, D.L.3
-
29
-
-
0037089589
-
Short hairpin RNAs (shRNAs) induce sequence-specific silencing in mammalian cells
-
Paddison,P.J., Caudy,A.A., Bernstein,E., Hannon,G.J. and Conklin,D.S. (2002) Short hairpin RNAs (shRNAs) induce sequence-specific silencing in mammalian cells. Genes Dev., 16, 948-958.
-
(2002)
Genes Dev
, vol.16
, pp. 948-958
-
-
Paddison, P.J.1
Caudy, A.A.2
Bernstein, E.3
Hannon, G.J.4
Conklin, D.S.5
-
30
-
-
0037440004
-
Functional studies of the PI(3)-kinase signalling pathway employing synthetic and expressed siRNA
-
Czauderna,F., Fechtner,M., Aygun,H., Arnold,W., Klippel,A., Giese,K. and Kaufmann,J. (2003) Functional studies of the PI(3)-kinase signalling pathway employing synthetic and expressed siRNA. Nucleic Acids Res. 31, 670-682.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 670-682
-
-
Czauderna, F.1
Fechtner, M.2
Aygun, H.3
Arnold, W.4
Klippel, A.5
Giese, K.6
Kaufmann, J.7
-
31
-
-
9144247189
-
Therapeutic silencing of an endogenous gene by systemic administration of modified siRNAs
-
Soutschek,J., Akinc,A., Bramlage,B., Charisse,K., Constien,R., Donoghue,M., Elbashir,S., Geick,A., Hadwiger,P. et al. (2004) Therapeutic silencing of an endogenous gene by systemic administration of modified siRNAs. Nature, 432, 173-178.
-
(2004)
Nature
, vol.432
, pp. 173-178
-
-
Soutschek, J.1
Akinc, A.2
Bramlage, B.3
Charisse, K.4
Constien, R.5
Donoghue, M.6
Elbashir, S.7
Geick, A.8
Hadwiger, P.9
-
32
-
-
0037733977
-
Antisense technologies. Improvement through novel chemical modifications
-
Kurreck,J. (2003) Antisense technologies. Improvement through novel chemical modifications. Eur. J. Biochem., 270, 1628-1644.
-
(2003)
Eur. J. Biochem
, vol.270
, pp. 1628-1644
-
-
Kurreck, J.1
-
33
-
-
0142181185
-
RNA interference and chemically modified siRNAs
-
Manoharan,M. (2003) RNA interference and chemically modified siRNAs. Nucleic Acids Res. (Suppl.3), 115-116.
-
(2003)
Nucleic Acids Res
, Issue.SUPPL.3
, pp. 115-116
-
-
Manoharan, M.1
-
34
-
-
3242677639
-
siRNAs: Applications in functional genomics and potential as therapeutics
-
Dorsett,Y. and Tuschl,T. (2004) siRNAs: Applications in functional genomics and potential as therapeutics. Nat. Rev. Drug Discov., 3, 318-329.
-
(2004)
Nat. Rev. Drug Discov
, vol.3
, pp. 318-329
-
-
Dorsett, Y.1
Tuschl, T.2
-
35
-
-
8844262560
-
RNA interference and chemically modified small interfering RNAs
-
Manoharan,M. (2004) RNA interference and chemically modified small interfering RNAs. Curr. Opin. Chem. Biol., 8, 570-579.
-
(2004)
Curr. Opin. Chem. Biol
, vol.8
, pp. 570-579
-
-
Manoharan, M.1
-
36
-
-
22744453672
-
Small non-coding RNAs as magic bullets
-
Eckstein,F. (2005) Small non-coding RNAs as magic bullets. Trends Biochem. Sci., 30, 445-452.
-
(2005)
Trends Biochem. Sci
, vol.30
, pp. 445-452
-
-
Eckstein, F.1
-
37
-
-
36148970328
-
Chemical modifications of synthetic siRNAs
-
Morrissey,D.V., Zinnen,S.P., Dickinson, B.A.; Jensen,K., McSwiggen,J.A., Vargeese,C. and Polisky,B. (2005) Chemical modifications of synthetic siRNAs. Pharm. Discovery Dev.
-
(2005)
Pharm. Discovery Dev
-
-
Morrissey, D.V.1
Zinnen, S.P.2
Dickinson, B.A.3
Jensen, K.4
McSwiggen, J.A.5
Vargeese, C.6
Polisky, B.7
-
38
-
-
33751099034
-
RNAi therapeutics: A potential new class of pharmaceutical drugs
-
Bumcrot,D., Manoharan,M., Koteliansky,V. and Sah,D.W. (2006) RNAi therapeutics: A potential new class of pharmaceutical drugs. Nat. Chem. Biol., 2, 711-719.
-
(2006)
Nat. Chem. Biol
, vol.2
, pp. 711-719
-
-
Bumcrot, D.1
Manoharan, M.2
Koteliansky, V.3
Sah, D.W.4
-
39
-
-
0038606999
-
Structural variations and stabilising modifications of synthetic siRNAs in mammalian cells
-
Czauderna,F., Fechtner,M., Dames,S., Aygun,H., Klippel,A., Pronk,G.J., Giese,K. and Kaufmann,J. (2003) Structural variations and stabilising modifications of synthetic siRNAs in mammalian cells. Nucleic Acids Res., 31, 2705-2716.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 2705-2716
-
-
Czauderna, F.1
Fechtner, M.2
Dames, S.3
Aygun, H.4
Klippel, A.5
Pronk, G.J.6
Giese, K.7
Kaufmann, J.8
-
40
-
-
29844452007
-
Small interfering RNAs containing full 2′-O-methylribonucleotide-modified sense strands display Argonaute2/eIF2C2-dependent activity
-
Kraynack,B.A. and Baker,B.F. (2006) Small interfering RNAs containing full 2′-O-methylribonucleotide-modified sense strands display Argonaute2/eIF2C2-dependent activity. RNA, 12, 163-176.
-
(2006)
RNA
, vol.12
, pp. 163-176
-
-
Kraynack, B.A.1
Baker, B.F.2
-
41
-
-
39049178646
-
Gene silencing activity of siRNAs with a ribo-difluorotoluyl nucleotide
-
Xia,J., Noronha,A., Toudjarska,I., Li,F., Akinc,A., Braich,R., Frank-Kamenetsky,M., Rajeev,K.G. et al. (2006) Gene silencing activity of siRNAs with a ribo-difluorotoluyl nucleotide. ACS Chem. Biol., 1, 176-183.
-
(2006)
ACS Chem. Biol
, vol.1
, pp. 176-183
-
-
Xia, J.1
Noronha, A.2
Toudjarska, I.3
Li, F.4
Akinc, A.5
Braich, R.6
Frank-Kamenetsky, M.7
Rajeev, K.G.8
-
42
-
-
0035692119
-
Reliable chemical synthesis of oligoribonucleotides (RNA) with 2′-O [(triisopropylsylyl)oxy]methyl(2′-O-tom)-protected phosphoramidites
-
Pitsch,S., Weiss,P.A., Jenny,L., Stutz,A. and Wu,X. (2001) Reliable chemical synthesis of oligoribonucleotides (RNA) with 2′-O [(triisopropylsylyl)oxy]methyl(2′-O-tom)-protected phosphoramidites. Helv. Chim. Acta, 84, 3773-3795.
-
(2001)
Helv. Chim. Acta
, vol.84
, pp. 3773-3795
-
-
Pitsch, S.1
Weiss, P.A.2
Jenny, L.3
Stutz, A.4
Wu, X.5
-
43
-
-
0037225166
-
Bistable secondary structures of small RNAs and their structural probing by comparative imino proton NMR spectroscopy
-
Hobartner,C. and Micura,R. (2003) Bistable secondary structures of small RNAs and their structural probing by comparative imino proton NMR spectroscopy. J. Mol. Biol., 325, 421-431.
-
(2003)
J. Mol. Biol
, vol.325
, pp. 421-431
-
-
Hobartner, C.1
Micura, R.2
-
44
-
-
0024804759
-
-
Puglisi,J.D., Tinoco, and I. Jr, (1989) Absorbance melting curves of RNA. Meth. Enzymol., 180, 304-325.
-
Puglisi,J.D., Tinoco, and I. Jr, (1989) Absorbance melting curves of RNA. Meth. Enzymol., 180, 304-325.
-
-
-
-
45
-
-
8744264860
-
A set of nonpolar thymidine nucleoside analogues with gradually increasing size
-
Kim,T.W. and Kool,E.T. (2004) A set of nonpolar thymidine nucleoside analogues with gradually increasing size. Org. Lett., 6, 3949-3952.
-
(2004)
Org. Lett
, vol.6
, pp. 3949-3952
-
-
Kim, T.W.1
Kool, E.T.2
-
46
-
-
0029100232
-
Extracting thermodynamic data from equilibrium melting curves for oligonucleotide order-disorder transitions
-
Breslauer,K.J. (1995) Extracting thermodynamic data from equilibrium melting curves for oligonucleotide order-disorder transitions. Meth. Enzymol., 259, 221-242.
-
(1995)
Meth. Enzymol
, vol.259
, pp. 221-242
-
-
Breslauer, K.J.1
-
47
-
-
0033524401
-
Effects of hydration, ion release, and excluded volume on the melting of triplex and duplex DNA
-
Spink,C.H. and Chaires,J.B. (1999) Effects of hydration, ion release, and excluded volume on the melting of triplex and duplex DNA. Biochemistry, 38, 496-508.
-
(1999)
Biochemistry
, vol.38
, pp. 496-508
-
-
Spink, C.H.1
Chaires, J.B.2
-
48
-
-
1242264497
-
Hydration of short DNA, RNA and 2′-OMe oligonucleotides determined by osmotic stressing
-
Rozners,E. and Moulder,J. (2004) Hydration of short DNA, RNA and 2′-OMe oligonucleotides determined by osmotic stressing. Nucleic Acids Res., 32, 248-254.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 248-254
-
-
Rozners, E.1
Moulder, J.2
-
49
-
-
0030132944
-
A highly efficient 24-condition matrix for the crystallization of nucleic acid fragments
-
Berger,I., Kang,C.H., Sinha,N., Wolters,M. and Rich,A. (1996) A highly efficient 24-condition matrix for the crystallization of nucleic acid fragments. Acta Crystallogr. D Biol. Crystallogr., 52, 465-468.
-
(1996)
Acta Crystallogr. D Biol. Crystallogr
, vol.52
, pp. 465-468
-
-
Berger, I.1
Kang, C.H.2
Sinha, N.3
Wolters, M.4
Rich, A.5
-
50
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski,Z. and,Minor,W. (1997) Processing of X-ray diffraction data collected in oscillation mode. Meth. Enzymol., 276, 307-326.
-
(1997)
Meth. Enzymol
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
51
-
-
0027879008
-
Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants
-
Kabsch,W. (1993) Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants. J. Appl. Cryst., 26, 795-800.
-
(1993)
J. Appl. Cryst
, vol.26
, pp. 795-800
-
-
Kabsch, W.1
-
52
-
-
0033081529
-
Rapid automated molecular replacement by evolutionary search
-
Kissinger,C.R., Gehlhaar,D.K. and Fogel,D.B. (1999) Rapid automated molecular replacement by evolutionary search. Acta Crystallogr. D Biol. Crystallogr., 55, 484-491.
-
(1999)
Acta Crystallogr. D Biol. Crystallogr
, vol.55
, pp. 484-491
-
-
Kissinger, C.R.1
Gehlhaar, D.K.2
Fogel, D.B.3
-
53
-
-
36148962769
-
-
Cambillau,C. and Roussel,A. (1997) Turbo Frodo, Version OpenGL.1.
-
Cambillau,C. and Roussel,A. (1997) Turbo Frodo, Version OpenGL.1.
-
-
-
-
54
-
-
0028773639
-
Crystal and molecular structure of r(CGCGAAUUAGCG): An RNA duplex containing two G(anti).A(anti) base pairs
-
Leonard,G.A., McAuley-Hecht,K.E., Ebel,S., Lough,D.M., Brown,T. and Hunter,W.N. (1994) Crystal and molecular structure of r(CGCGAAUUAGCG): an RNA duplex containing two G(anti).A(anti) base pairs. Structure 2, 493-494.
-
(1994)
Structure
, vol.2
, pp. 493-494
-
-
Leonard, G.A.1
McAuley-Hecht, K.E.2
Ebel, S.3
Lough, D.M.4
Brown, T.5
Hunter, W.N.6
-
55
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination
-
Brunger,A.T., Adams,P.D., Clore,G.M., DeLano, W.L., Gros,P., Grosse-Kunstleve,R.W., Jiang,J.S., Kuszewski,J., Nilges,M. et al. (1998) Crystallography & NMR system: A new software suite for macromolecular structure determination. Acta Crystallogr. D Biol. Crystallogr., 54, 905-921.
-
(1998)
Acta Crystallogr. D Biol. Crystallogr
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
Adams, P.D.2
Clore, G.M.3
DeLano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
-
56
-
-
0030880598
-
SHELXL: Highresolution refinement
-
Sheldrick,G.M. and Schneider,T.R. (1997) SHELXL: Highresolution refinement. Meth. Enzymol., 277, 319-343.
-
(1997)
Meth. Enzymol
, vol.277
, pp. 319-343
-
-
Sheldrick, G.M.1
Schneider, T.R.2
-
57
-
-
36148945523
-
-
Frisch,M.J., Trucks,G.W., Schlegel,H.B., Scuseria,G.E., Robb,M.A., Cheeseman,J.R., Montgomery,J.A.J., Vreven,T., Kudin,K.N. et al. (2004) edn. Revision C02 edn. Gaussian, Inc., Wallingford, CT.
-
Frisch,M.J., Trucks,G.W., Schlegel,H.B., Scuseria,G.E., Robb,M.A., Cheeseman,J.R., Montgomery,J.A.J., Vreven,T., Kudin,K.N. et al. (2004) edn. Revision C02 edn. Gaussian, Inc., Wallingford, CT.
-
-
-
-
58
-
-
84890021933
-
The calculation of small molecular interactions by the differences of separate total-energies. Some procedures with reduced errors
-
Boys,S.F. and Bernardi,F. (1970) The calculation of small molecular interactions by the differences of separate total-energies. Some procedures with reduced errors. Mol. Phys., 19, 553-566.
-
(1970)
Mol. Phys
, vol.19
, pp. 553-566
-
-
Boys, S.F.1
Bernardi, F.2
-
59
-
-
0029130871
-
Macromolecules and water: Probing with osmotic stress
-
Parsegian,V.A., Rand,R.P. and Rau,D.C. (1995) Macromolecules and water: probing with osmotic stress. Meth. Enzymol., 259, 43-94.
-
(1995)
Meth. Enzymol
, vol.259
, pp. 43-94
-
-
Parsegian, V.A.1
Rand, R.P.2
Rau, D.C.3
-
60
-
-
29744463877
-
Expanding functionality of RNA: Synthesis and properties of RNA containing imidazole modified tandem G-U wobble base pairs
-
Rozners,E., Smicius,R. and Uchiyama,C. (2005) Expanding functionality of RNA: Synthesis and properties of RNA containing imidazole modified tandem G-U wobble base pairs. Chem. Commun. (Camb.)5778-5780.
-
(2005)
Chem. Commun. (Camb.)
, pp. 5778-5780
-
-
Rozners, E.1
Smicius, R.2
Uchiyama, C.3
-
61
-
-
0032560503
-
In disperse solution, "osmotic stress" is a restricted case of preferential interactions
-
Timasheff,S.N. (1998) In disperse solution, "osmotic stress" is a restricted case of preferential interactions. Proc. Natl Acad. Sci. USA, 95, 7363-7367.
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 7363-7367
-
-
Timasheff, S.N.1
-
62
-
-
0034681955
-
Vapor pressure osinometry studies of osmolyte-protein interactions: Implications for the action of osmoprotectants in vivo and for the interpretation of "osmotic stress" experiments in vitro
-
Courtenay,E.S., Capp,M.W., Anderson,C.F. and Record,M.T.Jr (2000) Vapor pressure osinometry studies of osmolyte-protein interactions: implications for the action of osmoprotectants in vivo and for the interpretation of "osmotic stress" experiments in vitro. Biochemistry, 39, 4455-4771.
-
(2000)
Biochemistry
, vol.39
, pp. 4455-4771
-
-
Courtenay, E.S.1
Capp, M.W.2
Anderson, C.F.3
Record Jr, M.T.4
-
63
-
-
0024539180
-
Defining the structure of irregular nucleic acids: Conventions and principles
-
Lavery,R. and Sklenar,H. (1989) Defining the structure of irregular nucleic acids: Conventions and principles. J. Biomol. Struct. Dyn. 6, 655-667.
-
(1989)
J. Biomol. Struct. Dyn
, vol.6
, pp. 655-667
-
-
Lavery, R.1
Sklenar, H.2
-
64
-
-
0003438540
-
-
2nd edn. Cornell University Press, Ithaca, New York
-
Pauling,L. (1939) The Nature of the Chemical Bond, 2nd edn. Cornell University Press, Ithaca, New York.
-
(1939)
The Nature of the Chemical Bond
-
-
Pauling, L.1
-
65
-
-
33748565636
-
Molecular pair analysis: C-H.F interactions in the crystal structure of fluorobenzene? And related matters
-
Dunitz,J.D. and Schweizer,W.B. (2006) Molecular pair analysis: C-H.F interactions in the crystal structure of fluorobenzene? And related matters. Chem. Eur. J., 12, 6804-6815.
-
(2006)
Chem. Eur. J
, vol.12
, pp. 6804-6815
-
-
Dunitz, J.D.1
Schweizer, W.B.2
-
66
-
-
0344142531
-
-
Mueller,U., Schubel,H., Sprinzl,M. and Winemann,U. (1999) Crystal structure of acceptor stem of tRNA(Ala) from Escherichia coli shows unique G.U wobble base pair at 1 16 A.resolution. RNA, 5, 670-677.
-
Mueller,U., Schubel,H., Sprinzl,M. and Winemann,U. (1999) Crystal structure of acceptor stem of tRNA(Ala) from Escherichia coli shows unique G.U wobble base pair at 1 16 A.resolution. RNA, 5, 670-677.
-
-
-
-
68
-
-
0033985575
-
On the wobble GoU and related pairs
-
Masquida,B. and Westhof,E. (2000) On the wobble GoU and related pairs. RNA, 6, 9-15.
-
(2000)
RNA
, vol.6
, pp. 9-15
-
-
Masquida, B.1
Westhof, E.2
-
69
-
-
0034653488
-
RNA folding: Beyond Watson-Crick pairs
-
Westhof,E. and Fritsch,V. (2000) RNA folding: Beyond Watson-Crick pairs. Structure, 8, R55-R65.
-
(2000)
Structure
, vol.8
-
-
Westhof, E.1
Fritsch, V.2
-
70
-
-
0029956116
-
RNA hydration: A detailed look
-
Egli,M., Portmann,S. and Usman,N. (1996) RNA hydration: A detailed look. Biochemistry, 35, 8489-8494.
-
(1996)
Biochemistry
, vol.35
, pp. 8489-8494
-
-
Egli, M.1
Portmann, S.2
Usman, N.3
-
71
-
-
33746739544
-
The roles of hydrogen bonding and sterics in RNA interference
-
Somoza,A., Chelliserrykattil,J. and Kool,E.T. (2006) The roles of hydrogen bonding and sterics in RNA interference. Angew. Chem. Int. Ed. Engl., 45, 4994-4997.
-
(2006)
Angew. Chem. Int. Ed. Engl
, vol.45
, pp. 4994-4997
-
-
Somoza, A.1
Chelliserrykattil, J.2
Kool, E.T.3
-
72
-
-
0030967829
-
A thymidine triphosphate shape analog lacking Watson-Crick pairing ability is replicated with high sequence selectivity
-
Moran,S., Ren,R.X. and Kool,E.T. (1997) A thymidine triphosphate shape analog lacking Watson-Crick pairing ability is replicated with high sequence selectivity. Proc. Natl Acad. Sci. USA, 94, 10506-10511.
-
(1997)
Proc. Natl Acad. Sci. USA
, vol.94
, pp. 10506-10511
-
-
Moran, S.1
Ren, R.X.2
Kool, E.T.3
-
73
-
-
0030991442
-
Difluorotoluene, a nonpolar isostere of thymine, codes specifically and efficiently for adenine in DNA replication
-
Moran,S., Ren,R.X.-F., Rumney,S. and Kool,E.T. (1997) Difluorotoluene, a nonpolar isostere of thymine, codes specifically and efficiently for adenine in DNA replication. J. Am. Chem. Soc., 119, 2056-2057.
-
(1997)
J. Am. Chem. Soc
, vol.119
, pp. 2056-2057
-
-
Moran, S.1
Ren, R.X.-F.2
Rumney, S.3
Kool, E.T.4
-
74
-
-
0031792598
-
Efficient replication between non-hydrogen-bonded nucleoside shape analogs
-
Morales,J.C. and Kool,E.T. (1998) Efficient replication between non-hydrogen-bonded nucleoside shape analogs. Nat. Struct. Biol., 5, 950-954.
-
(1998)
Nat. Struct. Biol
, vol.5
, pp. 950-954
-
-
Morales, J.C.1
Kool, E.T.2
-
75
-
-
0037447258
-
High-fidelity in vivo replication of DNA base shape mimics without Watson-Crick hydrogen bonds
-
Delancy,J.C., Henderson,P.T., Helquist,S.A., Morales,J.C., Essigmann,J.M. and Kool,E.T. (2003) High-fidelity in vivo replication of DNA base shape mimics without Watson-Crick hydrogen bonds. Proc. Natl Acad. Sci. USA, 100, 4469-473.
-
(2003)
Proc. Natl Acad. Sci. USA
, vol.100
, pp. 4469-4473
-
-
Delancy, J.C.1
Henderson, P.T.2
Helquist, S.A.3
Morales, J.C.4
Essigmann, J.M.5
Kool, E.T.6
-
76
-
-
0032495022
-
Difluorotoluene, a thymine isostere, does not hydrogen bond after all
-
Wang,X. and Houk,K.N. (1998) Difluorotoluene, a thymine isostere, does not hydrogen bond after all. Chem. Comm. (Camb.)2631-2632.
-
(1998)
Chem. Comm. (Camb.)
, pp. 2631-2632
-
-
Wang, X.1
Houk, K.N.2
-
77
-
-
33644864228
-
Functional evidence for a small and rigid active site in a high fidelity DNA polymerase: Probing T7 DNA polymerase with variably sized base pairs
-
Kim,T.W., Brieba,L.G., Ellenberger,T. and Kool,E.T. (2006) Functional evidence for a small and rigid active site in a high fidelity DNA polymerase: Probing T7 DNA polymerase with variably sized base pairs. J. Biol. Chem., 281, 2289-2295.
-
(2006)
J. Biol. Chem
, vol.281
, pp. 2289-2295
-
-
Kim, T.W.1
Brieba, L.G.2
Ellenberger, T.3
Kool, E.T.4
-
78
-
-
0036074220
-
Crystal structure of an RNA helix recognized by a zinc-finger protein: An 18-bp duplex at 1.6A resolution
-
Lima,S., Hildenbrand,J., Korostelev,A., Hattman,S. and Li,H. (2002) Crystal structure of an RNA helix recognized by a zinc-finger protein: an 18-bp duplex at 1.6A resolution. RNA, 8, 924-932.
-
(2002)
RNA
, vol.8
, pp. 924-932
-
-
Lima, S.1
Hildenbrand, J.2
Korostelev, A.3
Hattman, S.4
Li, H.5
-
79
-
-
0033557138
-
Thermodynamics of RNA hairpins containing single internal mismatches
-
Meroueh,M. and Chow,C.S. (1999) Thermodynamics of RNA hairpins containing single internal mismatches. Nucleic Acids Res.i, 27 1118-1125.
-
(1999)
Nucleic Acids Res.i
, vol.27
, pp. 1118-1125
-
-
Meroueh, M.1
Chow, C.S.2
-
80
-
-
13444292424
-
Influence of a fluorobenzene nucleobase analogue on the conformational flexibility of RNA studied by molecular dynamics simulations
-
Zacharias,M. and Engels,J.W. (2004) Influence of a fluorobenzene nucleobase analogue on the conformational flexibility of RNA studied by molecular dynamics simulations. Nucleic Acids Res., 32, 6304-6311.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 6304-6311
-
-
Zacharias, M.1
Engels, J.W.2
-
81
-
-
0031790169
-
Solution structure of a DNA duplex containing a replicable difluorotoluene-adenine pair
-
Guckian,K.M., Krugh,T.R. and Kool,E.T. (1998) Solution structure of a DNA duplex containing a replicable difluorotoluene-adenine pair. Nat. Struct. Biol., 5, 954-959.
-
(1998)
Nat. Struct. Biol
, vol.5
, pp. 954-959
-
-
Guckian, K.M.1
Krugh, T.R.2
Kool, E.T.3
-
82
-
-
0029830638
-
Experimenial measurement of aromatic stacking affinities in the context of duplex DNA
-
Guckian,K.M., Schweitzer,B.A., Ren,R.X., Sheils,C., Paris,P.L., Tahmassebi,D.C. and Kool,E.T (1996) Experimenial measurement of aromatic stacking affinities in the context of duplex DNA. J. Am. Chem. Soc. 118, 8182-8183.
-
(1996)
J. Am. Chem. Soc
, vol.118
, pp. 8182-8183
-
-
Guckian, K.M.1
Schweitzer, B.A.2
Ren, R.X.3
Sheils, C.4
Paris, P.L.5
Tahmassebi, D.C.6
Kool, E.T.7
-
83
-
-
4544278491
-
Organic fluorine: Odd man out
-
Dunitz,J.D. (2004) Organic fluorine: Odd man out. Chembiochem, 5, 614-621.
-
(2004)
Chembiochem
, vol.5
, pp. 614-621
-
-
Dunitz, J.D.1
|