1JNH values show that N1⋯N3 hydrogen bonds are stronger in dsRNA A:U than dsDNA A:T base pairs

Journal of the American Chemical Society

Volumn 127, Issue 51, 2005, Pages 17974-17975

  Manalo, Marlon N ^a   Kong, Xiangming ^a   LiWang, Andy ^a  

^a TEXAS A AND M UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADENINE; DOUBLE STRANDED DNA; DOUBLE STRANDED RNA; THYMINE; URACIL; DNA; THYMIDINE; URIDINE;

AB INITIO CALCULATION; ANISOTROPY; ARTICLE; BASE PAIRING; BINDING AFFINITY; CARBON NUCLEAR MAGNETIC RESONANCE; CRYSTAL STRUCTURE; DIPOLE; HYDROGEN BOND; MOLECULAR INTERACTION; MOLECULAR STABILITY; NITROGEN NUCLEAR MAGNETIC RESONANCE; PKA; POLARIZATION; PROTEIN DNA BINDING; PROTEIN RNA BINDING; PROTON NUCLEAR MAGNETIC RESONANCE; CHEMISTRY; METABOLISM; METHODOLOGY; NUCLEAR MAGNETIC RESONANCE;

ADENINE; DNA; HYDROGEN BONDING; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; RNA, DOUBLE-STRANDED; THYMIDINE; URIDINE;

EID: 29844458157     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja055826l     Document Type: Article

References (24)

1. Saenger, W. Principles of Nucleic Acid Structure; Springer-Verlag: New York, 1984.
2. Vakonakis, I.; LiWang, A. C. J. Am. Chem. Soc. 2004, 126, 5688-5689.
3. Acharya, P.; Cheruku, P.; Chatterjee, S.; Acharya, S.; Chattopadhyaya, J. J. Am. Chem. Soc. 2004, 126, 2862-2869.
4. Narlikar, G. J.; Herschlag, D. Annu. Rev. Biochem. 1997, 66, 19-59.
5. Legault, P.; Pardi, A. J. Am. Chem. Soc. 1997, 119, 6621-6628.
6. Moody, E. M.; Brown, T. S.; Bevilacqua, P. C. J. Am. Chem. Soc. 2004, 126, 10200-10201.
7. Swart, M.; Guerra, C. F.; Bickelhaupt, F. M. J. Am. Chem. Soc. 2004, 126, 16718-16719.
8. Dingley, A. J.; Masse, J. E.; Peterson, R. D.; Barfield, M.; Feigon, J.; Grzesiek, S. J. Am. Chem. Soc. 1999, 121, 6019-6027.
9. Barfield, M.; Dingley, A. J.; Feigon, J.; Grzesiek, S. J. Am. Chem. Soc. 2001, 123, 4014-4022.
10. Juranic, N.; Ilich, P. K.; Macura, S. J. Am. Chem. Soc. 1995, 117, 405-410.
11. Grzesiek, S.; Cordier, F.; Jaravine, V.; Barfield, M. Prog. Nucl. Magn. Reson. Spectrosc. 2004, 45, 275-300.
12. Jameson, C. J. Isotope effects on chemical shifts & coupling constants. In Encyclopedia of Nuclear Magnetic Resonance; Grant, D. M., Harris, R. K., Eds.; Wiley: Chichester, 1996; pp 2638-2655.
13. Ottiger, M.; Delaglio, F.; Bax, A. J. Magn. Reson. 1998, 131, 373-378.
14. Vakonakis, I.; LiWang, A. C. J. Biomol. NMR 2004, 29, 65-72.
15. John SantaLucia, J.; Kierzek, R.; Turner, D. H. Science 1992, 256, 217-219.
16. Acharya, S.; Barman, J.; Cheruku, P.; Chatterjee, S.; Acharya, P.; Isaksson, J.; Chattopadhyaya, J. J. Am. Chem. Soc. 2004, 126, 8674-8681.
17. Mignon, P.; Loverix, S.; Steyaert, J.; Geerlings, P. Nucleic Acids Res. 2005, 33, 1779-1789.
18. Pérez, A.; Sponer, J.; Jurecka, P.; Hobza, P.; Luque, F. J.; Orozco, M. Chem. Eur. J. 2005, 11, 5062-5066.
19. Kim, Y.-I.; Manalo, M.; Perez, L.; LiWang, A. C. Manuscript submitted.
20. Ishikawa, R.; Kojima, C.; Ono, A.; Kainosho, M. Magn. Reson. Chem. 2001, 39, S159-S165.
21. Brüschweiler, R. P. Chem. Phys. Lett. 1996, 257, 119-122.
22. Tjandra, N.; Grzesiek, S.; Bax, A. J. Am. Chem. Soc. 1996, 118, 6264-6272.
23. Czernek, J. J. Phys. Chem. A 2001, 105, 1357-1365.
24. Asensio, A.; Kobko, N.; Dannenberg, J. J. J. Phys. Chem. A 2003, 107, 6441-6443.