On the use of IPCC-class models to assess the impact of climate on Living Marine Resources

Progress in Oceanography

Volumn 88, Issue 1-4, 2011, Pages 1-27

  Stock, Charles A ^a   Alexander, Michael A ^b   Bond, Nicholas A ^c   Brander, Keith M ^d   Cheung, William W L ^e   Curchitser, Enrique N ^f   Delworth, Thomas L ^a   Dunne, John P ^a   Griffies, Stephen M ^a   Haltuch, Melissa A ^b   Hare, Jonathan A ^g   Hollowed, Anne B ^b   Lehodey, Patrick ^h   Levin, Simon A ^a   Link, Jason S ⁱ   Rose, Kenneth A ^j   Rykaczewski, Ryan R ^a   Sarmiento, Jorge L ^a   Stouffer, Ronald J ^a   Schwing, Franklin B ^b   Vecchi, Gabriel A ^a   Werner, Francisco E ^f   more..

^a PRINCETON UNIVERSITY   (United States)

^b NOAA EARTH SYSTEM RESEARCH LABORATORY   (United States)

^c UNIVERSITY OF WASHINGTON   (United States)

^d TECHNICAL UNIVERSITY OF DENMARK   (Denmark)

^e UNIVERSITY OF EAST ANGLIA   (United Kingdom)

^f RUTGERS UNIVERSITY   (United States)

^g NOAA NMFS Northeast Fisheries Science Center   (United States)

^h CLS   (France)

ⁱ NORTHEAST FISHERIES SCIENCE CENTER   (United States)

^j LOUISIANA STATE UNIVERSITY   (United States)

more..

Author keywords

[No Author keywords available]

Indexed keywords

BIAS CORRECTION; CLASS MODELS; CLIMATE IMPACTS; CLIMATE MODEL SIMULATIONS; CLIMATE SYSTEM; CRITICAL CHALLENGES; DYNAMICAL DOWNSCALING; EARTH SYSTEM MODEL; IMPROVED MODELS; INTERANNUAL; INTERGOVERNMENTAL PANEL ON CLIMATE CHANGES; LOCAL SCALE; LONG TIME SERIES; MARINE RESOURCES; MODEL RESOLUTION; MULTI-MODEL ENSEMBLE; MULTISCALES; ROBUST PROJECTION; SCALE PREDICTION; SENSITIVITY-OF-RESULTS; SHARED UNDERSTANDING; TEMPORAL SCALE;

CLIMATE CHANGE; COMPUTER SIMULATION; EARTH (PLANET); MARINE BIOLOGY; MODELS; OCEANOGRAPHY; RATING; TIME SERIES;

CLIMATE MODELS;

CLIMATE EFFECT; CLIMATE MODELING; INTERGOVERNMENTAL PANEL ON CLIMATE CHANGE; MARINE RESOURCE; SPATIOTEMPORAL ANALYSIS; TIME SERIES;

EID: 79551490173     PISSN: 00796611     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.pocean.2010.09.001     Document Type: Review

References (223)

1. Alheit J., Mollmann C., Dutz J., Kornilovs G., Loewe P., Mohrholz V., Wasmund N. Synchronous ecological regime shifts in the central Baltic and the North Sea in the late 1980s. ICES Journal of Marine Science 2005, 62:1205-1215.
2. A'Mar Z., Punt A.E., Dorn M.W. The evaluation of two management strategies for the Gulf of Alaska walleye pollock fishery under climate change. ICES Journal of Marine Science 2009, 66:1614-1632.
3. Aumont O., Maier-Reimer E., Blain S., Monfray P. An ecosystem model of the global ocean including Fe, Si, P co-limitation. Global Biogeochemical Cycles 2003, 17:26.
4. BACC, 2007. Assessment of climate change for the Baltic Sea Basin - the BACC Project. In: Baltic Sea Environment Proceedings No. 111, IKSS, Gestacht, Germany, Gothenburg, Sweden, May 22-23, 2006, p. 49.
5. Baede A. Annex 1: glossary. Climate Change 2007: The Physical Science Basis. Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel of Climate Change 2007, 941-954. Cambridge University Press, Cambridge, United Kingdom and New York, NY, USA. S. Solomon, D. Qin, M. Manning, Z. Chen, M. Marquis, K.B. Averyt, M. Tignor, H.L. Miller (Eds.).
6. Baillee, J.E.M., Hilton-Taylor, C., Stuart, S.N., 2004. 2004 IUCN Red List of Threatened Species. A Global Species Assessment. IUCN, Gland, Switzerland, 191 pp.
7. Baird M.E., Suthers I.M. A size-resolved pelagic ecosystem model. Ecological Modelling 2007, 203:185-203.
8. Bakun, A., 1996. Patterns in the Ocean: Ocean Processes and Marine Population Dynamics. California Sea Grant College System, National Oceanic and Atmospheric Administration in cooperation with Centro de Investigaciones Biologicas del Noroeste.
9. Bakun A. 'School-mix feedback': a different way to think about low frequency variability in large mobile fish populations. Progress in Oceanography 2001, 49:485-511.
10. Barange, M., Allen, I., Allison, E., Badjeck, M.-C., Blanchard, J., Drakeford, B., Dulvy, N.K., Harle, J., Holmes, R., Holt, J., Jennings, S., Lowe, J., Merino, G., Mullon, C., Pilling, G., Rodwell, L., Tompkins, E., Werner, F., in press. Predicting the impacts and socio-economic consequences of climate change on global marine ecosystems and fisheries: the QUEST_Fish framework. In: Ommer, R. (Ed.), Coping with Climate Change in Marine Socio-Ecological Systems. Blackwell.
11. Begley, J., Howell, D., 2004. An overview of Gadget, the Globally applicable Area-Disaggregated General Ecosystem Toolbox. ICES Council Meeting Documents, 2004. ICES, Copenhagen, 13 pp.
12. Beissinger S.R., Mccollough D.R. Population Viability Analysis 2002, University of Chicago Press.
13. Bindoff N.L., Willebrand J., Artale V., Cazenave A., Gregory J., Gulev S., Hanawa K., Le Quéré C., Levitus S., Nojiri Y., Shum C.K., Talley L.D., Unnikrishnan A. Observations: oceanic climate change and sea level. Climate Change 2007: The Physical Science Basis. Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change 2007, 235-336. Cambridge University Press, Cambridge, United Kingdom and New York, NY, USA. S. Solomon, M. Manning, Z. Chen, M. Marquis, K.B. Averyt, M. Tignor, H.L. Miller (Eds.).
14. Blenckner T., Chen D. Comparison of the impact of regional and North-Atlantic atmospheric circulation on an aquatic ecosystem. Climate Research 2003, 23:131-136.
15. Block B.A., Teo S.L.H., Walli A., Boustany A., Stokesbury M.J.W., Farwell C.J., Weng K.C., Dewar H., Williams T.D. Electronic tagging and population structure of Atlantic bluefin tuna. Nature 2005, 434:1121-1127.
16. Boersma P.D., Rebstock G.A., Frere E., Moore S.E. Following the fish: penguins and productivity in the South Atlantic. Ecological Monographs 2009, 79:59-76.
17. Bogstad B., Hauge K.H., Ulltang O. MULTSPEC - a multi-species model for fish and marine mammals in the Barents Sea. Journal of Northern Atlantic Fisheries Science 1997, 22:317-341.
18. Bopp L., Monfray P., Aumont O., Dufresne J.L., Le Treut H., Madec G., Terray L., Orr J.C. Potential impact of climate change on marine export production. Global Biogeochemical Cycles 2001, 15:81-99.
19. Brander K.M. The effect of temperature on growth of Atlantic cod (Gadus-Morhua L). Ices Journal of Marine Science 1995, 52:1-10.
20. Brander K.M. Impacts of climate change on marine ecosystems and fisheries. Journal of the Marine Biological Association of India 2009, 51:1-13.
21. Brander K.M. Impacts of climate change on fisheries. Journal of Marine Systems 2010, 79:389-402.
22. Brill R.W. A review of temperature and oxygen tolerance studies of tunas pertinent to fisheries oceanography, movement models and stock assessments. Fisheries Oceanography 1994, 3:204-216.
23. Cavazos T. Downscaling large-scale circulation to local winter rainfall in northeastern Mexico. International Journal of Climatology 1997, 17:1069-1082.
24. Chavez F.P., Ryan J., Lluch-Cota S.E., Niquen C.M. From anchovies to sardines and back: multidecadal change in the Pacific Ocean. Science 2003, 299:217-221.
25. Cheung W.W.L., Close C., Lam V.M.Y., Watson R., Pauly D. Application of macroecological theory to predict effects of climate change on global fisheries potential. Marine Ecology Progress Series 2008, 365:187-197.
26. Cheung, W.W.L., Lam, V.M.Y., Pauly, D., 2008b. Modelling present and climate-shifted distributions of marine fishes and invertebrates. Fisheries Centre Research Reports 16 (3). University of British Columbia, Canada, pp. 51-62.
27. Cheung W.W.L., Lam V.W.Y., Sarmiento J.L., Kearney K., Watson A.J., Pauly D. Projecting global marine fish biodiversity impacts under climate change scenarios. Fish and Fisheries 2009, 10:235-251.
28. Cheung W.W.L., Lam V.W.Y., Sarmiento J.L., Kearney K., Watson R., Zeller D., Pauly D. Large-scale redistribution of maximum catch potential in the global ocean under climate change. Global Change Biology 2010, 16:24-35.
29. Christensen V., Pauly D. Placing fisheries in their ecosystem context, an introduction. Ecological Modelling 2004, 172:103-107.
30. Christensen J.H., Hewitson B., Busuioc A., Chen A., Gao X., Held I., Jones R., Kolli R.K., Kwon W.-T., Laprise R., Magaña Rueda V., Mearns L., Menéndez C.G., Räisänen J., Rinke A., Sarr A., Whetton P., University C., Press C.U. Regional climate projections. Climate Change 2007: The Physical Science Basis. Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change 2007, 847-940. Cambridge University Press, Cambridge, United Kingdom and New York, NY, USA. S. Solomon, D. Qin, M. Manning, Z. Chen, M. Marquis, K.B. Averyt, M. Tignor, H.L. Miller (Eds.).
31. Churnside J.H., Demer D.A., Mahmoudi B. A comparison of lidar and echosounder measurements of fish schools in the Gulf of Mexico. ICES Journal of Marine Science 2003, 60:147-154.
32. Close, C., Cheung, W.W.L., Hodgson, S., Lam, V.M.Y., Watson, R., Pauly, D., 2006. Distribution ranges of commercial fishes and invertebrates. Fisheries Centre Research Reports, Proceedings of the 2006 FishBase Symposium, vol. 14, pp. 27-37.
33. Cooper, A.B., 2006. A Guide to Fisheries Stock Assessment from Data to Recommendations. New Hampshire Sea Grant College Program, National Sea Grant College Program. NOAA, US Dept. of Commerce, Durham, NH, p. 45.
34. Cowen R.K., Guigand C.M. In situ Ichthyoplankton Imaging System (ISIIS): system design and preliminary results. Limnology and Oceanography Methods 2008, 6:126-132.
35. Cubasch U., Waszkewitz J., Hegerl G., Perlwitz J. Regional climate changes as simulated in time-slice experiments. Climatic Change 1995, 31:273-304.
36. Curchitser E.N., Haidvogel D.B., Hermann A.J., Dobbins E.L., Powell T.M., Kaplan A. Multi-scale modeling of the North Pacific Ocean: assessment and analysis of simulated basin-scale variability (1996-2003). Journal of Geophysical Research - Oceans 2005, 110:20.
37. Cury P.M., Shin Y.J., Planque B., Durant J.M., Fromentin J.M., Kramer-Schadt S., Stenseth N.C., Travers M., Grimm V. Ecosystem oceanography for global change in fisheries. Trends in Ecology and Evolution 2008, 23:338-346.
38. Cushing D.H. Plankton production and year-class strength in fish populations: an update of the match/mismatch hypothesis. Advances in Marine Biology 1990, 250-313. Academic Press, San Diego. J.H.S. Blaxter, A.J. Southward (Eds.).
39. Dame J.K., Christian R.R. Uncertainty and the use of network analysis for ecosystem-based fishery management. Fisheries 2006, 31:331-341.
40. DeAngelis D.L., Mooij W.M. Individual-based modeling of ecological and evolutionary processes. Annual Review of Ecology, Evolution, and Systematics 2005, 36:147-168.
41. Delworth T.L., Mann M.E. Observed and simulated multidecadal variability in the Northern Hemisphere. Climate Dynamics 2000, 16:661-676.
42. Delworth T.L., Broccoli A.J., Rosati A., Stouffer R.J., Balaji V., Beesley J.A., Cooke W.F., Dixon K.W., Dunne J., Dunne K.A., Durachta J.W., Findell K.L., Ginoux P., Gnanadesikan A., Gordon C.T., Griffies S.M., Gudgel R., Harrison M.J., Held I.M., Hemler R.S., Horowitz L.W., Klein S.A., Knutson T.R., Kushner P.J., Langenhorst A.R., Lee H., Lin S., Lu J., Malyshev S.L., Milly P.C.D., Ramaswamy V., Russell J., Schwarzkopf M.D., Shevliakova E., Sirutis J.J., Spelman M.J., Stern W.F., Winton M., Wittenberg A.T., Wyman B., Zeng F., Zhang R. GFDL's CM2 global coupled climate models. Part I: formulation and simulation characteristics. Journal of Climate 2006, 19:643-674.
43. Denman K.L., Brasseur G., Chidthaisong A., Ciais P., Cox P.M., Dickinson R.E., Hauglustaine D., Heinze C., Holland E., Jacob D., Lohmann U., Ramachandran S., da Silva Dias P.L., Wofsy S.C., Zhang X. Couplings between changes in the climate system and biogeochemistry. Climate Change 2007: The Physical Science Basis. Contributions of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change 2007, 499-587. Cambridge University Press, Cambridge, United Kingdom and New York, NY, USA. S. Solomon, D. Qin, M. Manning, Z. Chen, M. Marquis, K.B. Averyt, M. Tignor, H.L. Miller (Eds.).
44. deYoung B., Barange M., Beaugrand G., Harris R., Perry R.I., Scheffer M., Werner F. Regime shifts in marine ecosystems: detection, prediction and management. Trends in Ecology and Evolution 2008, 23:402-409.
45. Dickey T.D. Emerging ocean observations for interdisciplinary data assimilation systems. Journal of Marine Systems 2003, 5-48.
46. Drinkwater K.F., Beaugrand G., Kaeriyama M., Kim S., Ottersen G., Perry R.I., Portner H.-O., Polovina J.J., Takasuka A. On the processes linking climate to ecosystem changes. Journal of Marine Systems 2010, 374-388.
47. Drinkwater, K.F., Schrum, C., Brander, K.B., 2010b. Cod and future climate change. ICES Cooperative Research Report, 305. ICES, Copenhagen, 91 pp.
48. Edwards M., Richardson A.J. Impact of climate change on marine pelagic phenology and trophic mismatch. Nature 2004, 430:881-884.
49. Emeis K.-C., Finney B.P., Ganeshram R., Gutierrez D., Poulsen B., Struck U. Impacts of past climate variability on marine ecosystems: lessons from sediment records. Journal of Marine Systems 2010, 79:333-342.
50. FAO, 2007. The State of the World Fisheries and Aquaculture 2006. FAO, Rome, Italy, 162 pp.
51. Farneti R., Delworth T.L., Rosati A., Griffies S.M., Zeng F. The role of mesoscale eddies in the rectification of the southern ocean response to climate change. Journal of Physical Oceanography 2010, 40:1539-1557.
52. Field C.B., Behrenfeld M.J., Randerson J.T., Falkowski P. Primary production of the biosphere: integrating terrestrial and oceanic components. Science 1998, 281:237-240.
53. Finney B.P., Alheit J., Emeis K.-C., Field D.B., Gutierrez D., Struck U. Paleoecological studies on variability in marine fish populations: a long-term perspective on the impacts on climactic change on marine ecosystems. Journal of Marine Systems 2010, 79:316-326.
54. Forster P., Ramaswamy V., Artaxo P., Berntsen T., Betts R., Fahey D.W., Haywood J., Lean J., Lowe D.C., Myhre G., Nganga J., Prinn R., Raga G., Schulz M., Van Dorland R. Changes in atmospheric constituents and in radiative forcing. Climate Change 2007: The Physical Science Basis. Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change 2007, 129-234. Cambridge University Press, Cambridge, United Kingdom and New York, NY, USA. S. Solomon, D. Qin, M. Manning, Z. Chen, M. Marquis, K.B. Averyt, M. Tignor, H.L. Miller (Eds.).
55. 2-induced climate change. Transactions of the American Fisheries Society 1990, 119:353-365.
56. Fuimann L., Werner R. Fishery Science: The Unique Contribution of the Early Life Stages 2002, Wiley-Blackwell.
57. Fulton E.A., Parslow J.S., Smith A.D.M., Johnson C.R. Biogeochemical marine ecosystem models II: the effect of physiological detail on model performance. Ecological Modelling 2004, 173:371-406.
58. Fulton E.A., Smith A.D.M., Johnson C.R. Biogeochemical marine ecosystem models I: IGBEM - a model of marine bay ecosystems. Ecological Modelling 2004, 174:267-307.
59. Fulton E.A., Smith A.D.M., Punt A.E. Which ecological indicators can robustly detect effects of fishing. ICES Journal of Marine Science 2005, 62:540-551.
60. Fulton, E.A., Smith, A.D.M., Smith, D.C., 2007. Alternative Management Strategies for Southeast Australian Commonwealth Fisheries: Stage 2: Quantitative Management Strategy Evaluation. Australian Fisheries Management Authority, Fisheries Research and Development Corporation, 405 pp.
61. Fulton, E.A., Link, J.S., Kaplan, I., Savina-Rolland, M., Johnson, P., Ainsworth, C., Horne, P., Gorton, R., Gamble, R.J., Smith, A.D.M., Smith, D.C., in press. Lessons in modeling and management of marine ecosystems: The Atlantis Experiment. Fish and Fisheries.
62. Gent P.R., Willebrand J., McDougall T.J., McWilliams J.C. Parameterizing eddy-induced tracer transports in ocean circulation models. Journal of Physical Oceanography 1995, 25:463-474.
63. Giorgi F., Mearns L.O. Calculation of average, uncertainty range, and reliability of regional climate changes from AOGCM simulations via the "reliability ensemble averaging'' (REA) method. Journal of Climate 2002, 15:1141-1158.
64. Glynn P.W. Widespread coral mortality and the 1982-83 El Nino warming event. Environmental Conservation 1984, 11:133-146.
65. Gnanadesikan A., Dixon K.W., Griffies S.M., Balaji V., Barreiro M., Beesley J.A., Cooke W.F., Delworth T.L., Gerdes R., Harrison M.J., Held I.M., Hurlin W.J., Lee H., Liang Z., Nong G., Pacanowski R.C., Rosati A., Russell J., Samuels B.L., Song Q., Spelman M.J., Stouffer R.J., Sweeney C.O., Vecchi G., Winton M., Wittenberg A.T., Zeng F., Zhang R., Dunne J.P. GFDL's CM2 global coupled climate models. Part II: the baseline ocean simulation. Journal of Climate 2006, 19:675-697.
66. Grebmeier J.M., Overland J.E., Moore S.E., Farley E.V., Carmack E.C., Cooper L.W., Frey K.E., Helle J.H., McLaughlin F.A., McNutt S.L. A major ecosystem shift in the northern Bering Sea. Science 2006, 311:1461-1464.
67. Green P.A., Voeroesmarty C.J., Meybeck M., Galloway J.N., Peterson B.J., Boyer E.W. Pre-industrial and contemporary fluxes of nitrogen through rivers: a global assessment based on typology. Biogeochemistry 2004, 68:71-105.
68. Griffies S.M., Gnanadesikan A., Dixon K.W., Dunne J.P., Gerdes R., Harrison M.J., Rosati A., Russell J.L., Samuels B.L., Spelman M.J., Winton M., Zhang R. Formulation of an ocean model for global climate simulations. Ocean Science 2005, 1:45-79.
69. Griffies S.M., Biastoch A., Boning C., Bryan F., Danabasoglu G., Chassignet E.P., England M.H., Gerdes R., Haak H., Hallberg R.W., Hazeleger W., Jungclaus J., Large W.G., Madec G., Pirani A., Samuels B.L., Scheinert M., Sen Gupta A., Severijns C.A., Simmons H.L., Treguier A.M., Winton M., Yeager S., Yin J.J. Coordinated ocean-ice reference experiments (COREs). Ocean Modelling 2009, 26:1-46.
70. Grimm V., Revilla E., Berger U., Jeltsch F., Mooij W.M., Railsback S.F., Thulke H.-H., Weiner J., Wiegand T., DeAngelis D.L. Pattern-oriented modeling of agent-based complex systems: lessons from ecology. Science 2005, 310:987-991.
71. Haddon M. Modeling and Quantitative Methods in Fisheries 2001, Chapman Hall, Boca Raton.
72. Haltuch, M., Punt, A., submitted for publication. The promise and pitfalls of using climate data in fish stock assessment. Canadian Journal of Fisheries and Aquatic Sciences.
73. Hamel, O.S., Stewart, I.J., 2009. Stock Assessment of the Pacific Hake, Merluccius productus, (a.k.a. Whiting) in US and Canadian Waters in 2009. Northwest Fisheries Science Center, NMFS, NO AA, Pacific Fishery Management Council, Seattle, 244 pp.
74. Hamill T.M., Whitaker J.S., Mullen S.L. Reforecasts, an important new data set for improving weather predictions. Bulletin of the American Meteorological Society 2006, 87:33-46.
75. Hare J.A., Able K.W. Mechanistic links between climate and fisheries along the east coast of the United States: explaining population outbursts of Atlantic croaker (Micropogonias undulatus). Fisheries Oceanography 2007, 16:31-45.
76. Hare S.R., Mantua N.J. Empirical evidence for North Pacific [climatic] regime shifts in 1977 and 1989. Progress in Oceanography 2000, 47:103-145.
77. Hare J., Alexander M., Fogarty M., Williams E., Scott J. Forecasting the dynamics of a coastal fishery species using a coupled climate-population model. Ecological Applications 2010, 20:452-464.
78. Hastie T.J., Tibshirani R.J. Generalized Additive Models 1990, Chapman and Hall, New York.
79. Haury L.R., McGowan J.A. Patterns and processes in the time-space of plankton distributions. Spatial Pattern in Plankton Communities 1978, 277-327. Plenum Press, New York, NY, USA.
80. Haylock M.R., Cawley G.C., Harpham C., Wilby R.L., Goodess C.M. Downscaling heavy precipitation over the United Kingdom: a comparison of dynamical and statistical methods and their future scenarios. International Journal of Climatology 2006, 26:1397-1415.
81. Heikkinen R.K., Luoto M., Araujo M.B., Virkkala R., Thuiller W., Sykes M.T. Methods and uncertainties in bioclimatic envelope modelling under climate change. Progress in Physical Geography 2006, 30:751-777.
82. Henson S.A., Dunne J.P., Sarmiento J.L. Decadal variability in North Atlantic phytoplankton blooms. Journal of Geophysical Research, Oceans 2009, 114:C04013. 10.1029/2008JC005139.
83. Henson S.A., Sarmiento J.L., Dunne J.P.D., Bopp L., Lima I., Doney S.C., John J., Beaulieu C. Is global warming already changing ocean productivity. Biogeosciences Discussions 2009, 6:10311-10354.
84. Hermann A.J., Curchitser E.N., Haidvogel D.B., Dobbins E.L. A comparison of remote vs. local influence of El Nino on the coastal circulation of the northeast Pacific. Deep Sea Research, Part II 2009, 56:2427-2443.
85. Hettler W.F. Correlation of winter temperature and landings of pink shrimp Penaeus duorarum in North Carolina. Fishery Bulletin 1992, 90:405-406.
86. Hewitson B.C., Crane R.G. Climate downscaling: techniques and application. Climate Research 1996, 7:85-95.
87. Heyen H., Zorita E., Von Storch H. Statistical downscaling of monthly mean North Atlantic air-pressure to sea level anomalies in the Baltic Sea, Tellus. Series A: Dynamic Meteorology and Oceanography 1996, 48A(2).
88. Heymans J.J., Baird D. A carbon flow model and network analysis of the northern Benguela Upwelling system, Namibia. Ecological Modelling 2000, 126:9-32.
89. Hickey B. coastal oceanography of Western North America from the tip of Baja California to Vancouver Island. The Sea 1998, 345-394. John Wiley and Sons, Inc. A.R. Robinson, K.H. Brink (Eds.).
90. Hilborn R., Walters C.J. Quantitative Fisheries Stock Assessment: Choice, Dynamics, and Uncertainty 1992, Chapman and Hall, New York.
91. Hjort J. Fluctuations in the great fisheries of northern Europe. Rapports et Proces-Verbaux des Reunions. Conseil International pour l'Exploration de la Mer 1914, 20:1-227.
92. Holland K.N., Brill R.W., Chang R.K.C., Sibert J.R., Fournier D.A. Physiological and behavioural thermoregulation in bigeye tuna (Thunnus obesus). Nature 1992, 358(6385).
93. Hollowed A.B., Bax N., Beamish R., Collie J., Fogarty M., Livingston P., Pope J., Rice J.C. Are multispecies models an improvement on single-species models for measuring fishing impacts on marine ecosystems. ICES Journal of Marine Science 2000, 57:707-719.
94. Hollowed A.B., Hare S.R., Wooster W.S. Pacific Basin climate variability and patterns of Northeast Pacific marine fish production. Progress in Oceanography 2001, 49:257-282.
95. Hollowed A.B., Bond N.A., Wilderbuer T.K., Stockhausen W.T., A'mar Z.T., Beamish R.J., Overland J.E., Schirripa M.J. A framework for modelling fish and shellfish responses to future climate change. ICES Journal of Marine Science 2009, 66:1584-1594.
96. Howard, H.M., Link, J.S., Osgood, K.E., Gedamke, T., Watters, G.M., Polovina, J.J., Levin, P.S., Cyr, N., Aydin, K.Y., 2008. Report of the NEMoW (National Ecosystem Modeling Workshop). NOAA Technical Memorandum NMFS-F/SPO-87, US Department of Commerce, Silver Spring, Maryland, 93 pp.
97. Hsieh C.H., Reiss C.S., Hunter J.R., Beddington J.R., May R.M., Sugihara G. Fishing elevates variability in the abundance of exploited species. Nature 2006, 443:859-862.
98. Huston M., DeAngelis D.L., Post W. New computer models unify ecological theory. Biosciences 1988, 38:682-691.
99. Iverson R.L. Control of marine fish production. Limnology and Oceanography 1990, 35:1593-1604.
100. Jensen A.J.C. Fluctuations in the racial characters of the Plaice and the Dab. Journal Du Conseil Pour L'Exploration De La Mer 1939, 14:370-384.
101. Ji R., Davis C., Chen C., Beardsley R. Influence of local and external processes on the annual nitrogen cycle and primary productivity on Georges Bank: a 3-D biological-physical modeling study. Journal of Marine Systems 2008, 73:31-47.
102. Joyce T.M. One hundred plus years of wintertime climate variability in the eastern United States. Journal of Climate 2002, 15:1076-1088.
103. Jun M., Knutti R., Nychka D.W. Spatial analysis to quantify numerical model bias and dependence: how many climate models are there. Journal of the American Statistical Association Applications and Case Studies 2008, 103:934-947.
104. Karl T.R., Wang W.C., Schlesinger M.E., Knight R.W., Portman D. A method of relating General Circulation Model simulated climate to the observed local climate. Part I: seasonal statistics. Journal of Climate 1990, 3:1053-1079.
105. Keenlyside N.S., Latif M., Jungclaus J., Komblueh L., Roeckner E. Advancing decadal-scale climate prediction in the North Atlantic sector. Nature 2008, 453:84-88.
106. Keller, A.A., Hommes, B.H., Fruh, E.L., Simon, V.H., Tuttle, V.J., Bosley, K.L., Buchanan, J.C., Kamikawa, D.J., Wallace, J.R., 2008. The 2005 US West Coast bottom trawl survey of groundfish resources off Washington, Oregon, and California: Estimates of distribution, abundance, and length composition. NOAA Technical Memo., NMFS-NWFSC-93, US Dept. of Commerce, p. 136.
107. Kenney R.D., Winn H.E., Macaulay M.C. Cetaceans in the Great South Channel, 1979-1989: right whale (Eubalaena glacialis). Continental Shelf Research 1995, 15:385-414.
108. Keyl F., Wolff M. Environmental variability and fisheries: what can models do. Reviews in Fish Biology and Fisheries 2008, 18:273-299.
109. Kim D., Kug J.-S., Kang I.-S., Jin F.-F., Wittenberg A.T. Tropical Pacific impacts of convective momentum transport in the SNU coupled GCM. Climate Dynamics 2008, 31:213-226.
110. Kiorboe T. A Mechanistic Approach to Plankton Ecology 2008, Princeton University Press, Princeton, NJ.
111. Kishi M.J., Kashiwai M., Ware D.M., Megrey B.A., Eslinger D.L., Werner F.E., Noguchi-Aita M., Azumaya T., Fuji M., Hashimoto S., Huang D., Iizumi H., Ishida Y., Kang S., Kantakov G.A., Kim H.-c., Komatsu K., Navrotsky V.V., Smith S.L., Tadokoro K., Tsuda A., Yamamura O., Yamanaka Y., Yakouchi K., Yoshi N., Zhang J., Zuenko Y.I., Zvalinsky V.I. NEMURO - a lower trophic level model for the North Pacific marine ecosystem. Ecological Modeling 2007, 202:12-25.
112. Koeller P., Fuentes-Yaco C., Platt T., Sathyendranath S., Richards A., Ouellet P., Orr D., Skuladottir U., Wieland K., Savard L., Aschan M. Basin-scale coherence in phenology of shrimps and phytoplankton in the North Atlantic Ocean. Science 2009, 324:791-793.
113. Koster F.W., Schnack D., Mollmann C. Scientific knowledge of biological processes potentially useful in fish stock prediction. Scientia Marina 2003, 67:101-127.
114. Krishnamurti T.N., Chakraborty A., Krishnamurti R., Dewar W.K., Clayson C.A. Seasonal prediction of sea surface temperature anomalies using a suite of 13 coupled atmosphere-ocean models. Journal of Climate 2006, 19:6069-6088.
115. Lam V.W.Y., Cheung W.W.L., Close C., Hodgson S., Watson R., Pauly D. Modelling seasonal distribution of pelagic marine fishes and squids. Fisheries Centre Research Reports 2008, 16(3):51-62.
116. Lankford T.E., Targett T.E. Low-temperature tolerance of age-0 Atlantic croakers: recruitment implications for US mid-Atlantic estuaries. Transactions of the American Fisheries Society 2001, 130:236-249.
117. Large, W., Yeager, S., 2004. Diurnal to decadal global forcing for ocean and sea-ice models: the data sets and flux climatologies. NCAR Technical Note, TN-460. National Center for Atmospheric Research, Boulder, 112 pp.
118. Le Treut H., Somerville R., Cubasch U., Ding Y., Mauritzen C., Mokssit A., Peterson T., Prather M. Historical overview of climate change. Climate Change 2007: The Physical Science Basis. Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change 2007, 95-127. Cambridge University Press, Cambridge UK and New York, NY, USA. S. Solomon, D. Qin, M. Manning, Z. Chen, M. Marquis, K.B. Averyt, M. Tignor, H.L. Miller (Eds.).
119. Lehodey P., Alheit J., Barange M., Baumgartner T., Beaugrand G., Drinkwater K., Fromentin J.-M., Hare S., Ottersen G., Perry R., Roy C., van der Lingen C.D., Werner F.E. Climate variability, fish, and fisheries. Journal of Climate 2006, 15:5009-5030.
120. Lehodey P., Senina I., Murtugudde R. A spatial ecosystem and populations dynamics model (SEAPODYM) - modeling of tuna and tuna-like populations. Progress in Oceanography 2008, 78:304-318.
121. Lehodey P., Murtugudde R., Senina I. Bridging the gap from ocean models to population dynamics of large marine predators: a model of mid-trophic functional groups. Progress in Oceanography 2010, 84:69-84.
122. Lehodey P., Senina I., Sibert J., Bopp L., Calmettes B., Hampton J., Murtugudde R. Preliminary forecasts of Pacific bigeye tuna population trends under the A2 IPCC scenario. Progress in Oceanography 2010, 86:302-315.
123. Lemke P., Ren J., Alley R.B., Allison I., Carrasco J., Flato G., Fujii Y., Kaser G., Mote P., Thomas R.H., Zhang T. Observations: changes in snow, ice and frozen ground. Climate Change 2007: The Physical Science Basis. Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change 2007, 337-383. Cambridge University Press, Cambridge, United Kingdom and New York, NY, USA. S. Solomon, D. Qin, M. Manning, Z. Chen, M. Marquis, K.B. Averyt, M. Tignor, H.L. Miller (Eds.).
124. Lett C., Rose K.A., Megrey B.A. Biophysical models. Climate Change and Small Pelagic Fish 2009, 88-111. Cambridge University Press, Cambridge. C. Checkley, C. Roy, J. Alheit, Y. Oozeki (Eds.).
125. Levin S. The problem of pattern and scale in ecology: The Robert H. MacArthur Award Lecture. Ecology 1992, 73:1943-1967.
126. Levitan, D.R., Sewell, M.A., 1998. Fertilization success in free-spawning marine invertebrates: review of the evidence and fisheries implications. In: Proceedings of the North Pacific Symposium on Invertebrate Stock Assessment and Management. Canadian Special Publication of Fisheries and Aquatic Sciences, Ottawa ON, pp. 159-164.
127. Lindegren M., Möllmann C., Nielsen A., Stenseth N.C. Preventing the collapse of the Baltic cod stock through an ecosystem-based management approach. Proceedings of the National Academy of Sciences 2009, 106:14722-14727.
128. Lindegren M., Möllmann C., Nielsen A., Brander K.M., MacKenzie B., Stenseth N.C. Ecological forecasting under climate change: the case of Baltic cod. Philosophical Transactions of the Royal Society of London - B 2010, 277:2121-2130.
129. Liu Y.M., Guo L., Wu G.X., Wang Z.Z. Sensitivity of ITCZ configuration to cumulus convective parameterizations on an aqua planet. Climate Dynamics 2010, 34:223-240.
130. Lluch-Belda D., Crawford R.J.M., Kawasaki T., MacCall A.D., Parrish R.H., Schwartzlose R.A., Smith P.E. World-wide fluctuations of sardine and anchovy stocks: the regime problem. South African Journal of Marine Science 1989, 8:195-205.
131. Lluch-Belda D., Schwartzlose R.A., Serra R., Parrish R., Kawasaki T., Hedgecock D., Crawford R.J.M. Sardine and anchovy regime fluctuations of abundance in four regions of the world oceans: a workshop report. Fisheries Oceanography 1992, 1:339-347.
132. Mace P.M. A new role for MSY in single-species and ecosystem approaches to fisheries stock assessment and management. Fish and Fisheries 2001, 2:2-32.
133. Makris N.C., Ratilal P., Jagannathan S., Gong Z., Andrews M., Bertsatos I., Godo O.R., Nero R.W., Jech J.M. Critical population density triggers rapid formation of vast oceanic fish shoals. Science 2009, 323:1734-1737.
134. Mantua N.J., Hare S.R., Zhang Y., Wallace J.M., Francis R.C. A Pacific interdecadal climate oscillation with impacts on salmon production. Bulletin of the American Meteorological Society 1997, 78:1069-1080.
135. Martell S.J.D., Essington T.E., Lessard J., Kitchell J.F., Walters C.J., Boggs C.T. Interactions of productivity, predation risk, and fishing effort in the efficacy of marine protected areas for the central Pacific. Canadian Journal of Fisheries and Aquatic Sciences 2005, 62:1320-1336.
136. Marti, O., Braconnot, P., Bellier, J., Benshila, R., Bony, S., Brockmann, P., Cadule, P., Caubel, A., Denvil, S., Dufresne, J.-L., Fairhead, L., Filiberti, M.-A., Foujols, M.-A., Fichefet, T., Friedlingstein, P., Gosse, H., Grandpeix, J.-Y., Hourdin, F., Krinner, G., Lévy, C., Madec, G., Musat, I., de Noblet, N., Polcher, J., Talandier, C., 2006. The new IPSL climate system model: IPSL-CM4. Note du Pôle de Modélisation, vol. 26. IPSL, Paris, 84 pp.
137. McAfee, S.A., Russell, J.L., Goodman, P., submitted for publication. Evaluating IPCC AR4 cool-season precipitation simulations and projections for impacts assessment over North America. Climate Dynamics.
138. Meehl G.A., Stocker T.F., Collins W.D., Friedlingstein P., Gaye A.T., Gregory J.M., Kitoh A., Knutti R., Murphy J.M., Noda A., Raper S.P.B., Watterson I.G., Weaver A.J., Zhao Z.-C. Global climate projections. Climate Change 2007: The Physical Science Basis. Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change 2007, 589-662. Cambridge University Press, Cambridge, United Kingdom and New York, NY, USA. S. Solomon, D. Qin, M. Manning, Z. Chen, M. Marquis, K.B. Averyt, M. Tignor, H.L. Miller (Eds.).
139. Meier H., Kjellstroem E., Graham L. Estimating uncertainties of projected Baltic Sea salinity in the late 21st century. Geophysical Research Letters 2006, 33:4.
140. Metcalfe J.D., Arnold G.P. Tracking fish with electronic tags. Nature 1997, 387:665-666.
141. Moore, J.K., Doney, S.C., Lindsey, K., 2004. Upper ocean ecosystem dynamics and iron cycling in a global three-dimensional model. Global Biogeochemical Cycles 18, 21 pp.
142. Mullon C., Mittaine J.F., Thebaud O., Peron G., Merino G., Barange M. Modeling the global fishmeal and fish oil markets. Natural Resource Modeling 2009, 22:564-609.
143. Murawski, S.A., Mountain, D.G., 1990. Climate change and marine fish distributions: analogies from seasonal and annual variability. In: Conference Proceedings, C36, International Council for the Exploration of the Sea, pp. 1-24.
144. Murphy J.M., Booth B.B., Collins M., Harris G.R., Sexton D.M., Webb M.J. A methodology for probabilistic predictions of regional climate change from perturbed physics ensembles. Philosophical Transactions Series A, Mathematical, Physical, and Engineering Sciences 2007, 365:1993-2028.
145. Myers R.A. When do environment-recruitment correlations work. Reviews in Fish Biology and Fisheries 1998, 8:285-305.
146. Nakicenovic, N., Swart, R., Alcamo, J., Davis, G., de Vries, B., Fenhann, J., Gaffin, S., Gregory, K., Grubler, A., Jung, T.Y., Kram, T., Lebre La Rovere, E., Michaelis, L., Mori, S., Morita, T., Pepper, W., Pitcher, H., Price, L., Riahi, K., Roehrl, A., Rogner, H.-H., Sankovski, A., Schlesinger, M., Shukla, P., Smith, S., van Rooijen, S., Victor, N., Dadi, Z., 2000. Special Report on Emissions Scenarios. IPCC Special reports on Climate Change, Intergovernmental Panel on Climate Change, The Hague, 612 pp.
147. Nellemann C., Hain S., Alder J. In Dead Water - merging of climate change with pollution, over-harvest, and infestations in the world's fishing grounds. UNEP 2008, 64.
148. NMFS, 2001. Marine Fisheries Stock Assessment Improvement Plan. Report of the National Marine Fisheries Service National Task Force for Improving Fish Stock Assessments. US Department of Commerce, NOAA Tech. Memo. NMFS-F/SPO-56. United States Department of Commerce, Silver Spring, MD, USA, 69 pp. (25 appendices).
149. NMFS, 2008. Fisheries of the United States, 2007. Current Fishery Statistics No. 2007, US Department of Commerce, Sliver Spring, MD, USA, 118 pp.
150. NOAA, 2006. Biennial Report to Congress on the Recovery Program for Threatened and Endangered Species. Office of Protected Resources, National Marine Fisheries Service. US Dept. of Commerce, Silver Spring, MD, USA, 177 pp.
151. Norcross, B.L., Austin, H.M., 1981. Climate Scale Environmental Factors Affecting Year Class Fluctuations of Chesapeake Bay Croaker Micropogonias undulatus. VIMS Special Scientific Report, 110. Virginia Institute of Marine Science, Gloucester Point, VA, 86 pp.
152. North, E.W., Gallego, A., Petitgas, P., Adlandsvik, B., Bartsch, J., Brickman, D., Browman, H.I., Edwards, K., Fiksen, O., Hermann, A.J., Hinckley, S., Houde, E., Huret, M., Irisson, J.-O., Lacroix, G., Leis, J.M., McCloghrie, P., Megrey, B.A., Miller, T., van der Molen, J., Mullon, C., Parada, C., Paris, C.B., Pepin, P., Rose, K.A., Thygesen, U.H., Werner, C., 2009. Manual of recommended practices for modeling physical-biological interactions during fish early life. ICES Cooperative Research Report, 295, International Council for the Exploration of the Sea, Copenhagen, 118 pp.
153. Nye J.A., Link J.S., Hare J.A., Overhultz W.J. Changing spatial distribution of fish stocks in relation to climate and population size on the Northeast United States continental shelf. Marine Ecology Progress Series 2009, 393:111-139.
154. Ottersen G., Hjermann D.O., Stenseth N.C. Changes in spawning stock structure strengthen the link between climate and recruitment in a heavily fished cod (Gadus morhua) stock. Fisheries Oceanography 2006, 15:230-243.
155. Overholtz W.J., Jech J.M., Michaels W.L., Jacobson L.D. Empirical comparisons of survey designs in acoustic surveys of Gulf of Maine-Georges Bank Atlantic herring. Journal of Northwest Atlantic Fishery Science 2006, 36:127-144.
156. Overland J.E., Wang M. Future climate of the North Pacific Ocean. Eos Transactions of the American Geophysical Union 2007, 88:178-179.
157. Overland J.E., Bond N.A., Adams J.M. The relation of surface forcing of the Bering Sea to large-scale climate patterns. Deep-Sea Research, Part II 2002, 49:5855-5868.
158. Overland J., Rodionov S., Minobe S., Bond N. North Pacific regime shifts: definitions, issues and recent transitions. Progress in Oceanography 2008, 77:92-102.
159. Parry H.R., Evans A.J. A comparative analysis of parallel processing and super-individual methods for improving the computational performance of a large individual-based model. Ecological Modelling 2008, 214:141-152.
160. Pauly D., Christensen V. Primary production required to sustain global fisheries. Nature 1995, 374:255-257.
161. Pauly D., Christensen V., Walters C. Ecopath, Ecosim, and Ecospace as tools for evaluating ecosystem impact of fisheries. ICES Journal of Marine Science 2000, 57:697-706.
162. Pierce D.W., Barnett T.P., Santer B.D., Gleckler P.J. Selecting global climate models for regional climate change studies. Proceedings of the National Academy of Sciences 2009, 106:8441-8446.
163. Plaganyi E.E., Rademeyer R.A., Butterworth D.S., Cunningham C.L., Johnston S.J. Making management procedures operational - innovations implemented in South Africa. ICES Journal of Marine Science 2007, 64:626-632.
164. Planque, B., Bellier, J., Loots, C., submitted for publication. Uncertainties in projecting spatial distributions of marine populations. ICES Journal of Marine Science, 19 pp.
165. Pohlmann H., Jungclaus J.H., Kohl A., Stammer D., Marotzke J. Initializing decadal climate predictions with the GECCO oceanic synthesis: effects of the North Atlantic. Journal of Climate 2009, 22:3926-3938.
166. Polovina J.J. Model of a coral reef ecosystem. I. The ECOPATH model and its application to French Frigate Shoals. Coral Reefs 1984, 3:1-11.
167. Poulsen B. The variability of fisheries and fish populations prior to industrialized fishing: an appraisal of the historical evidence. Journal of Marine Systems 2010, 79:327-332.
168. Powell, T.M., Lewis, C.V.W., Curchitser, E.N., Haidvogel, D.B., Hermann, A.J., Dobbins, E.L., 2006. Results from a three-dimensional, nested biological-physical model of the California Current System and comparisons with statistics from satellite imagery. Journal of Geophysical Research. C. Oceans 111, 14 pp.
169. Quinn T.J., Deriso R.B. Quantitative Fish Dynamics 1999, Oxford University Press, New York.
170. Raftery A.E., Gneiting T., Balabdaoui F., Polakowski M. Using Bayesian model averaging to calibrate forecast ensembles. Monthly Weather Review 2005, 133:1155-1174.
171. Randall D.A., Wood R.A., Bony S., Colman R., Fichefet T., Fyfe J., Kattsov V., Pitman A., Shukla J., Srinivasan J., Stouffer R.J., Sumi A., Taylor K.E. Climate models and their evaluation. Climate Change 2007: The Physical Science Basis. Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change 2007, 589-662. Cambridge University Press, Cambridge UK and New York, NY, USA. S. Solomon, D. Qin, M. Manning, Z. Chen, M. Marquis, K.B. Averyt, M. Tignor, H.L. Miller (Eds.).
172. Ravier C., Fromentin J. Long-term fluctuations in the eastern Atlantic and Mediterranean bluefin tuna population. ICES Journal of Marine Science 2001, 58:1299-1317.
173. Rayner R., Parker D., Horton E., Folland C., Alexander L., Rowel D. Global analyses of sea surface temperature, sea ice, and night marine air temperature since the late nineteenth century. Journal of Geophysical Research 2003, 108:D14,4407. 10.1029/2002JD002670.
174. Reichler T., Kim J. How well do coupled models simulate today's climate. Bulletin of the American Meteorological Society 2008, 303-311. 10.1175/BAMS-89-3-303.
175. Richardson A.J., Schoeman D.S. Climate impact on plankton ecosystems in the northeast Atlantic. Science 2004, 305:1609-1612.
176. Richardson D.E., Llopiz J.K., Leaman K.D., Vertes P.S., Muller-Karger F.E., Cowen R.K. Sailfish (Istiophorus platypterus) spawning and larval environment in a Florida Current frontal eddy. Progress in Oceanography 2009, 82:252-264.
177. Ricker W. Stock and recruitment. Journal of the Fisheries Research Board of Canada 1954, 11:559-623.
178. Roelofs E.W., Bumpus D.F. The hydrography of Pamlico Sound. Bulletin of Marine Science of the Gulf and Caribbean 1953, 3:181-205.
179. Rose K.A., Rutherford E.S., McDermot D.S., Forney J.L., Mills E.L. Individual-based model of yellow perch and walleye populations in Oneida Lake. Ecological Monographs 1999, 69:127-154.
180. Rose K.A., Allen J.I., Artioli Y., Barange M., Blackford J., Carlotti F., Cropp R., Daewel U., Edwards K., Flynn K., Hill S., Hille Ris Lambers R., Huse G., Mackinson S., Megrey B.A., Moll A., Rivkin R., Salihoglu B., Schrum C., Shannon L., Shin Y., Smith S.L., Smith C., Solidoro C., St John M., Zhou M. End-to-end models for the analysis of marine ecosystems: challenges, issues, and next steps. Marine and Coastal Fisheries: Dynamics, Management and Ecosystem Science 2010, 2:115-130.
181. Rosenkranz G.E., Gallager S.M., Shepard R.W., Blakeslee M. Development of a high-speed, megapixel benthic imaging system for coastal fisheries research in Alaska. Fisheries Research 2008, 92:340-344.
182. Rothschild B.J. The Dynamics of Marine Fish Populations 1986, Harvard University Press, Cambridge.
183. Rothschild B.J., Osborn T.R. Small-scale turbulence and plankton contact rates. Journal of Plankton Research 1988, 10:465-474.
184. 2. Science 2004, 305:367-371.
185. Salathe E.P. Downscaling simulations of future global climate with application to hydrologic modelling. International Journal of Climatology 2005, 25:419-436.
186. Santer B.D., Taylor K.E., Gleckler P.J., Bonfils C., Barnett T.P., Pierce D.W., Wigley T.M.L., Mears C., Wentz F.J., Bruggemann W., Gillet N.P., Klein S.A., Solomon S., Stott P.A., Wehner M.F. Incorporating model quality information in climate change detection and attribution studies. Proceedings of the National Academy of Sciences 2009, 106:14778-14783.
187. Sarmiento J.L., Slater R., Barber R., Bopp L., Doney S.C., Hirst A.C., Kleypas J., Matear R., Mikolajewicz U., Monfray P., Soldatov V., Spall S.A., Stouffer R. Response of ocean ecosystems to climate warming. Global Biogeochemical Cycles 2004, 18. 23 pp.
188. Scheffer M., Baveco J.M., DeAngelis D.L., Rose K.A., Van Nes E.H. Super-individuals a simple solution for modelling large populations on an individual basis. Ecological Modelling 1995, 80:161-170.
189. Schwartzlose R.A., Alheit J., Bakun A., Baumgartner T.R., Cloete R., Crawford R.J.M., Fletcher W.J., Green-Ruiz Y., Hagen E., Kawasaki T., Lluch-Belda D., Lluch-Cota S.E., MacCall A.D., Matsuura Y., Nevarez-Martinez M.O., Parrish R.H., Roy C., Serra R., Shust K.V., Ward M.N., Zuzunaga J.Z. Worldwide large-scale fluctuations of sardine and anchovy populations. South African Journal of Marine Science 1999, 21:289-347.
190. Seitzinger S.P., Harrison J.A., Dumont E., Beusen A.H.W., Bouwman A.F. Sources and delivery of carbon, nitrogen, and phosphorus to the coastal zone: an overview of Global Nutrient Export from Watersheds (NEWS) models and their application. Global Biogeochemical Cycles 2005, 19. 11 pp.
191. Senina I., Sibert J., Lehodey P. Parameter estimation for basin-scale ecosystem-linked population models of large pelagic predators: application to skipjack tuna. Progress in Oceanography 2008, 78:319-335.
192. Shchepetkin A.F., McWilliams J.C. The regional oceanic modeling system (ROMS): a split-explicit, free-surface, topography-following-coordinate oceanic model. Ocean Modelling 2005, 9:347-404.
193. Shin Y.-J., Cury P. Exploring fish community dynamics through size-dependent trophic interactions using a spatialized individual-based model. Aquatic Living Resources 2001, 14:65-80.
194. Shin Y.-J., Cury P. Using an individual-based model of fish assemblages to study the response of size spectra to changes in fishing. Canadian Journal of Fisheries and Aquatic Sciences 2004, 61:414-431.
195. Sigler, M.F., Harvey, H.R., 2009. Understanding ecosystem processes in the Bering Sea: first year field highlights from the BEST-BSIERP partnership. Alaska Fisheries Science Center Quarterly Report January, February, March, 2009, pp. 1-8.
196. Smagorinsky J. General circulation experiments with the primitive equations, I. The basic experiment. Monthly Weather Review 1963, 91:99-164.
197. Smith D.M., Cusack S., Colman A.W., Folland C.K., Harris G.R., Murphy J. Improved surface temperature prediction for the coming decade from a global climate model. Science 2007, 796-799.
198. Smith Thomas M., Reynolds R.W., Peterson T.C., Lawrimore J. Improvements to NOAA's historical merged land-ocean surface temperature analysis (1880-2006). Journal of Climate 2008, 21:2283-2296.
199. Steele J.H. Regime shifts in marine ecosystems. Ecological Applications 1998, 8:S33-S36.
200. Stefansson G., Palsson O.K. A framework for multispecies modelling of Arcto-boreal systems. Reviews in Fish Biology and Fisheries 1998, 8:101-104.
201. Stenseth N.C., Mysterud A., Ottersen G., Hurrell J.W., Chan K.S., Lima M. Ecological effects of climate fluctuations. Science 2002, 297:1292-1296.
202. Stouffer R.J., Broccoli A.J., Delworth T.L., Dixon K.W., Gudgel R., Held I., Hemler R., Knutson T., Lee H., Schwarzkopf M.D., Soden B., Spelman M.J., Winton M., Zeng F. GFDL's CM2 global coupled climate models. Part IV: idealized climate response. Journal of Climate 2006, 19:723-740.
203. Stow C.A., Jolliff J., McGillicuddy D.J., Doney S.C., Allen J.I., Friedrichs M.A.M., Rose K.A., Wallheadg P. Skill assessment for coupled biological/physical models of marine systems. Journal of Marine Systems 2009, 76:4-15.
204. Taylor C.C., Bigelow H.B., Graham H.W. Climatic trends and the distribution of marine animals in New England. Fishery Bulletin 1957, 57:293-345.
205. Tjelmeland S., Bogstad B. MULTSPEC - a review of a multispecies modelling project for the Barents Sea. Fisheries Research 1998, 37:127-142.
206. Tourre Y.M., Lluch-Cota S.E., White W.B. Global multi-decadal ocean climate and small-pelagic fish population. Environmental Research Letters 2007, 2. 9 pp.
207. Travers M., Shin Y.J., Jennings S., Cury P. Towards end-to-end models for investigating the effects of climate and fishing in marine ecosystems. Progress in Oceanography 2007, 75:751-770.
208. Traynor J.J., Williamson N.J., Karp W.A. A consideration of the accuracy and precision of fish-abundance estimates derived from echo-integration surveys. Rapports et Proces-Verbaux des Reunions. Conseil International pour l'Exploration de la Mer 1990, 189:101-111.
209. Trenberth K.E., Jones P.D., Ambenje P., Bojariu R., Easterling D., Klein Tank A., Parker D., Rahimzadeh F., Renwick J.A., Rusticucci M., Soden B., Zhai P. Observations: surface and atmospheric climate change. Climate Change 2007: The Physical Science Basis. Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change 2007, 235-336. Cambridge University Press, Cambridge, United Kingdom and New York, NY, USA. S. Solomon, D. Qin, M. Manning, Z. Chen, M. Marquis, K.B. Averyt, M. Tignor, H.L. Miller (Eds.).
210. Tyler J.A., Rose K.A. Individual variability and spatial heterogeneity in fish population models. Reviews in Fish Biology and Fisheries 1994, 4:91-123.
211. Van Winkle W., Rose K.A., Chambers R.C. Individual-based approach to fish population dynamics: an overview. Transactions of the American Fisheries Society 1993, 122:397-403.
212. Vecchi G.A., Soden B.J., Wittenberg A.T., Held I.M., Leetmaa A., Harrison M.J. Weakening of tropical Pacific atmospheric circulation due to anthropogenic forcing. Nature 2006, 441:73-76.
213. Vecchi G.A., Swanson K.L., Soden B.J. Climate change whither hurricane activity. Science 2008, 322:687-689.
214. Walters C., Christensen V., Pauly D. Structuring dynamic models of exploited ecosystems from trophic mass-balance assessments. Reviews in Fish Biology and Fisheries 1997, 7:139-172.
215. Ware D.M., Thompson R.E. Bottom-up ecosystem trophic dynamics determine fish production in the northeast Pacific. Science 2005, 308:1280-1284.
216. Werner F.E., Quinlan J.A., Lough R.G., Lynch D.R. Spatially-explicit individual based modeling of marine populations: a review of the advances in the 1990s. Sarsia 2001, 86:411-421.
217. Whipple S.J., Link J.S., Garrison L.P., Fogarty M.J. Models of predation and fishing mortality in aquatic ecosystems. Fish and Fisheries 2000, 1:22-40.
218. Widmann M., Bretherton C.S., Salathe E.P. Statistical precipitation downscaling over the northwestern United States using numerically simulated precipitation as a predictor. Journal of Climate 2003, 16:799-816.
219. Wilby, R.L., Charles, S.P., Zorita, E., Timbal, B., Whetton, P., Mearns, L.O., 2004. Guidelines for use of climate scenarios developed from statistical downscaling methods. IPCC Task Group on Data and Scenario Support for Impact and Climate Analysis, Intergovernmental Panel of Climate Change, 27 pp.
220. Wilderbuer T.K., Hollowed A.B., Ingraham W.J., Spencer P.D., Conners M.E., Bond N.A., Walters G.E. Flatfish recruitment response to decadal climatic variability and ocean conditions in the eastern Bering Sea. Progress in Oceanography 2002, 55:235-247.
221. Wittenberg A.T., Rosati A., Lau N., Ploshay J.J. GFDL's CM2 global coupled climate models. Part III: tropical Pacific climate and ENSO. Journal of Climate 2006, 19:698-722.
222. Worm B., Hilborn R., Baum J.K., Branch T.A., Collie J.S., Costello C., Fogarty M.J., Fulton E.A., Hutchings J.A., Jennings S., Jensen O.P., Lotze H.K., Mace P.M., McClanahan T.R., Minto C., Palumbi S.R., Parma A.M., Ricard D., Rosenberg A.A., Watson R., Zeller D. Rebuilding global fisheries. Science 2009, 325:578-585.
223. Zimmer R.K., Butman C.A. Chemical signaling processes in the marine environment. Biological Bulletin, Marine Biological Laboratory 2000, 198:168-187.