-
1
-
-
0344586043
-
Mutagenicity, toxicity and repair of DNA base damage induced by oxidation
-
Bjelland S, Seeberg E (2003) Mutagenicity, toxicity and repair of DNA base damage induced by oxidation. Mutat Res 531: 37-80.
-
(2003)
Mutat Res
, vol.531
, pp. 37-80
-
-
Bjelland, S.1
Seeberg, E.2
-
2
-
-
0035902108
-
Genome maintenance mechanisms for preventing cancer
-
Hoeijmakers JH (2001) Genome maintenance mechanisms for preventing cancer. Nature 411: 366-374.
-
(2001)
Nature
, vol.411
, pp. 366-374
-
-
Hoeijmakers, J.H.1
-
3
-
-
0031151501
-
Recombination and joining: Different means to the same ends
-
Kanaar R, Hoeijmakers JH (1997) Recombination and joining: different means to the same ends. Genes Funct 1: 165-174.
-
(1997)
Genes Funct
, vol.1
, pp. 165-174
-
-
Kanaar, R.1
Hoeijmakers, J.H.2
-
4
-
-
50849111489
-
Regulation of DNA doublestrand break repair pathway choice
-
Shrivastav M, De Haro LP, Nickoloff JA (2007) Regulation of DNA doublestrand break repair pathway choice. Cell Res 24: 24.
-
(2007)
Cell Res
, vol.24
, pp. 24
-
-
Shrivastav, M.1
De Haro, L.P.2
Nickoloff, J.A.3
-
5
-
-
0031638515
-
The host defence function of genomic methylation patterns
-
discussion 195-189, 228-132
-
Bestor TH (1998) The host defence function of genomic methylation patterns. Novartis Found Symp 214: 187-195; discussion 195-189, 228-132.
-
(1998)
Novartis Found Symp
, vol.214
, pp. 187-195
-
-
Bestor, T.H.1
-
6
-
-
0034610814
-
The language of covalent histone modifications
-
Strahl BD, Allis CD (2000) The language of covalent histone modifications. Nature 403: 41-45.
-
(2000)
Nature
, vol.403
, pp. 41-45
-
-
Strahl, B.D.1
Allis, C.D.2
-
8
-
-
0037444803
-
Histone deacetylases (HDACs): Characterization of the classical HDAC family
-
de Ruijter AJ, van Gennip AH, Caron HN, Kemp S, van Kuilenburg AB (2003) Histone deacetylases (HDACs): characterization of the classical HDAC family. Biochem J 370: 737-749.
-
(2003)
Biochem J
, vol.370
, pp. 737-749
-
-
de Ruijter, A.J.1
van Gennip, A.H.2
Caron, H.N.3
Kemp, S.4
van Kuilenburg, A.B.5
-
9
-
-
0028919756
-
Histone H3 and H4 N-termini interact with SIR3 and SIR4 proteins: A molecular model for the formation of heterochromatin in yeast
-
Hecht A, Laroche T, Strahl-Bolsinger S, Gasser SM, Grunstein M (1995) Histone H3 and H4 N-termini interact with SIR3 and SIR4 proteins: a molecular model for the formation of heterochromatin in yeast. Cell 80: 583-592.
-
(1995)
Cell
, vol.80
, pp. 583-592
-
-
Hecht, A.1
Laroche, T.2
Strahl-Bolsinger, S.3
Gasser, S.M.4
Grunstein, M.5
-
10
-
-
0028234142
-
Histone H3 amino terminus is required for telomeric and silent mating locus repression in yeast
-
Thompson JS, Ling X, Grunstein M (1994) Histone H3 amino terminus is required for telomeric and silent mating locus repression in yeast. Nature 369: 245-247.
-
(1994)
Nature
, vol.369
, pp. 245-247
-
-
Thompson, J.S.1
Ling, X.2
Grunstein, M.3
-
11
-
-
0035839136
-
Translating the Histone Code
-
Jenuwein T, Allis CD (2001) Translating the Histone Code. Science 293: 1074-1080.
-
(2001)
Science
, vol.293
, pp. 1074-1080
-
-
Jenuwein, T.1
Allis, C.D.2
-
12
-
-
0037059029
-
Histone H3 lysine 4 methylation is mediated by Set1 and promotes maintenance of active chromatin states in fission yeast
-
Noma K, Grewal SI (2002) Histone H3 lysine 4 methylation is mediated by Set1 and promotes maintenance of active chromatin states in fission yeast. Proc Natl Acad Sci U S A 99: 16438-16445.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 16438-16445
-
-
Noma, K.1
Grewal, S.I.2
-
13
-
-
3042781030
-
Silencing of human polycomb target genes is associated with methylation of histone H3 Lys 27
-
Kirmizis A, Bartley SM, Kuzmichev A, Margueron R, Reinberg D, et al. (2004) Silencing of human polycomb target genes is associated with methylation of histone H3 Lys 27. Genes Dev 18: 1592-1605.
-
(2004)
Genes Dev
, vol.18
, pp. 1592-1605
-
-
Kirmizis, A.1
Bartley, S.M.2
Kuzmichev, A.3
Margueron, R.4
Reinberg, D.5
-
14
-
-
0036166206
-
When repair meets chromatin. First in series on chromatin dynamics
-
Green CM, Almouzni G (2002) When repair meets chromatin. First in series on chromatin dynamics. EMBO Rep 3: 28-33.
-
(2002)
EMBO Rep
, vol.3
, pp. 28-33
-
-
Green, C.M.1
Almouzni, G.2
-
15
-
-
0018125018
-
Nucleosome rearrangement in human chromatin during UV-induced DNA- reapir synthesis
-
Smerdon MJ, Lieberman MW (1978) Nucleosome rearrangement in human chromatin during UV-induced DNA- reapir synthesis. Proc Natl Acad Sci U S A 75: 4238-4241.
-
(1978)
Proc Natl Acad Sci U S A
, vol.75
, pp. 4238-4241
-
-
Smerdon, M.J.1
Lieberman, M.W.2
-
16
-
-
0037179692
-
Acetylation of histone H4 by Esa1 is required for DNA double-strand break repair
-
Bird AW, Yu DY, Pray-Grant MG, Qiu Q, Harmon KE, et al. (2002) Acetylation of histone H4 by Esa1 is required for DNA double-strand break repair. Nature 419: 411-415.
-
(2002)
Nature
, vol.419
, pp. 411-415
-
-
Bird, A.W.1
Yu, D.Y.2
Pray-Grant, M.G.3
Qiu, Q.4
Harmon, K.E.5
-
17
-
-
0036888874
-
Histone H3 and the histone acetyltransferase Hat1p contribute to DNA double-strand break repair
-
Qin S, Parthun MR (2002) Histone H3 and the histone acetyltransferase Hat1p contribute to DNA double-strand break repair. Mol Cell Biol 22: 8353-8365.
-
(2002)
Mol Cell Biol
, vol.22
, pp. 8353-8365
-
-
Qin, S.1
Parthun, M.R.2
-
18
-
-
10944267160
-
Binding of chromatin-modifying activities to phosphorylated histone H2A at DNA damage sites
-
Downs JA, Allard S, Jobin-Robitaille O, Javaheri A, Auger A, et al. (2004) Binding of chromatin-modifying activities to phosphorylated histone H2A at DNA damage sites. Mol Cell 16: 979-990.
-
(2004)
Mol Cell
, vol.16
, pp. 979-990
-
-
Downs, J.A.1
Allard, S.2
Jobin-Robitaille, O.3
Javaheri, A.4
Auger, A.5
-
19
-
-
20344364883
-
Localized histone acetylation and deacetylation triggered by the homologous recombination pathway of double-strand DNA repair
-
Tamburini BA, Tyler JK (2005) Localized histone acetylation and deacetylation triggered by the homologous recombination pathway of double-strand DNA repair. Mol Cell Biol 25: 4903-4913.
-
(2005)
Mol Cell Biol
, vol.25
, pp. 4903-4913
-
-
Tamburini, B.A.1
Tyler, J.K.2
-
20
-
-
34247172850
-
Histone modifications in response to DNA damage
-
Altaf M, Saksouk N, Cote J (2007) Histone modifications in response to DNA damage. Mutat Res 618: 81-90.
-
(2007)
Mutat Res
, vol.618
, pp. 81-90
-
-
Altaf, M.1
Saksouk, N.2
Cote, J.3
-
21
-
-
34848852196
-
Chromatin dynamics during DSB repair. Biochim Biophys Acta
-
Jul 1518
-
Falk M, Lukasova E, Gabrielova B, Ondrej V, Kozubek S (2007) Chromatin dynamics during DSB repair. Biochim Biophys Acta 1773: 1534-1545. Epub 2007 Jul 1518.
-
(2007)
Epub
, pp. 2007
-
-
Falk, M.1
Lukasova, E.2
Gabrielova, B.3
Ondrej, V.4
Kozubek, S.5
-
22
-
-
34548692558
-
Inhibition of transcription at radiation-induced nuclear foci of phosphorylated histone H2AX in mammalian cells
-
Solovjeva LV, Svetlova MP, Chagin VO, Tomilin NV (2007) Inhibition of transcription at radiation-induced nuclear foci of phosphorylated histone H2AX in mammalian cells. Chromosome Res 15: 787-797.
-
(2007)
Chromosome Res
, vol.15
, pp. 787-797
-
-
Solovjeva, L.V.1
Svetlova, M.P.2
Chagin, V.O.3
Tomilin, N.V.4
-
23
-
-
34748902384
-
Global chromatin compaction limits the strength of the DNA damage response
-
Murga M, Jaco I, Fan Y, Soria R, Martinez-Pastor B, et al. (2007) Global chromatin compaction limits the strength of the DNA damage response. J Cell Biol 178: 1101-1108.
-
(2007)
J Cell Biol
, vol.178
, pp. 1101-1108
-
-
Murga, M.1
Jaco, I.2
Fan, Y.3
Soria, R.4
Martinez-Pastor, B.5
-
24
-
-
21144433566
-
Recruitment of DNA methyltransferase I to DNA repair sites
-
Mortusewicz O, Schermelleh L, Walter J, Cardoso MC, Leonhardt H (2005) Recruitment of DNA methyltransferase I to DNA repair sites. Proc Natl Acad Sci U S A 102: 8905-8909.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 8905-8909
-
-
Mortusewicz, O.1
Schermelleh, L.2
Walter, J.3
Cardoso, M.C.4
Leonhardt, H.5
-
25
-
-
0034705129
-
The silencing protein SIR2 and its homologs are NAD-dependent protein deacetylases
-
Landry J, Sutton A, Tafrov ST, Heller RC, Stebbins J, et al. (2000) The silencing protein SIR2 and its homologs are NAD-dependent protein deacetylases. Proc Natl Acad Sci U S A 97: 5807-5811.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 5807-5811
-
-
Landry, J.1
Sutton, A.2
Tafrov, S.T.3
Heller, R.C.4
Stebbins, J.5
-
26
-
-
0033612287
-
Relocalization of telomeric Ku and SIR proteins in response to DNA strand breaks in yeast
-
Martin SG, Laroche T, Suka N, Grunstein M, Gasser SM (1999) Relocalization of telomeric Ku and SIR proteins in response to DNA strand breaks in yeast. Cell 97: 621-633.
-
(1999)
Cell
, vol.97
, pp. 621-633
-
-
Martin, S.G.1
Laroche, T.2
Suka, N.3
Grunstein, M.4
Gasser, S.M.5
-
27
-
-
0030964526
-
Silencing factors participate in DNA repair and recombination in Saccharomyces cerevisiae
-
Tsukamoto Y, Kato J, Ikeda H (1997) Silencing factors participate in DNA repair and recombination in Saccharomyces cerevisiae. Nature 388: 900-903.
-
(1997)
Nature
, vol.388
, pp. 900-903
-
-
Tsukamoto, Y.1
Kato, J.2
Ikeda, H.3
-
28
-
-
0030990291
-
Molecular model for telomeric heterochromatin in yeast
-
Grunstein M (1997) Molecular model for telomeric heterochromatin in yeast. Curr Opin Cell Biol 9: 383-387.
-
(1997)
Curr Opin Cell Biol
, vol.9
, pp. 383-387
-
-
Grunstein, M.1
-
29
-
-
0032536861
-
Components of the Ku-dependent nonhomologous end-joining pathway are involved in telomeric length maintenance and telomeric silencing
-
Boulton SJ, Jackson SP (1998) Components of the Ku-dependent nonhomologous end-joining pathway are involved in telomeric length maintenance and telomeric silencing. Embo J 17: 1819-1828.
-
(1998)
Embo J
, vol.17
, pp. 1819-1828
-
-
Boulton, S.J.1
Jackson, S.P.2
-
30
-
-
0031878710
-
Double-strand break repair mediated by DNA end-joining
-
Tsukamoto Y, Ikeda H (1998) Double-strand break repair mediated by DNA end-joining. Genes Cells 3: 135-144.
-
(1998)
Genes Cells
, vol.3
, pp. 135-144
-
-
Tsukamoto, Y.1
Ikeda, H.2
-
31
-
-
0034677535
-
Transcriptional silencing and longevity protein Sir2 is an NAD-dependent histone deacetylase
-
Imai S, Armstrong CM, Kaeberlein M, Guarente L (2000) Transcriptional silencing and longevity protein Sir2 is an NAD-dependent histone deacetylase. Nature 403: 795-800.
-
(2000)
Nature
, vol.403
, pp. 795-800
-
-
Imai, S.1
Armstrong, C.M.2
Kaeberlein, M.3
Guarente, L.4
-
32
-
-
0028933783
-
Yeast histone H4 and H3 N-termini have different effects on the chromatin structure of the GAL1 promoter
-
Fisher-Adams G, Grunstein M (1995) Yeast histone H4 and H3 N-termini have different effects on the chromatin structure of the GAL1 promoter. Embo J 14: 1468-1477.
-
(1995)
Embo J
, vol.14
, pp. 1468-1477
-
-
Fisher-Adams, G.1
Grunstein, M.2
-
33
-
-
30344444484
-
Histone acetylation by Trrap-Tip60 modulates loading of repair proteins and repair of DNA doublestrand breaks
-
Murr R, Loizou JI, Yang YG, Cuenin C, Li H, et al. (2006) Histone acetylation by Trrap-Tip60 modulates loading of repair proteins and repair of DNA doublestrand breaks. Nat Cell Biol 8: 91-99.
-
(2006)
Nat Cell Biol
, vol.8
, pp. 91-99
-
-
Murr, R.1
Loizou, J.I.2
Yang, Y.G.3
Cuenin, C.4
Li, H.5
-
34
-
-
0034682736
-
Involvement of the TIP60 histone acetylase complex in DNA repair and apoptosis
-
Ikura T, Ogryzko VV, Grigoriev M, Groisman R, Wang J, et al. (2000) Involvement of the TIP60 histone acetylase complex in DNA repair and apoptosis. Cell 102: 463-473.
-
(2000)
Cell
, vol.102
, pp. 463-473
-
-
Ikura, T.1
Ogryzko, V.V.2
Grigoriev, M.3
Groisman, R.4
Wang, J.5
-
35
-
-
0035913911
-
Negative control of p53 by Sir2 alpha promotes cell survival under stress
-
Luo JY, Nikolaev AY, Imai S, Chen DL, Su F, et al. (2001) Negative control of p53 by Sir2 alpha promotes cell survival under stress. Cell 107: 137-148.
-
(2001)
Cell
, vol.107
, pp. 137-148
-
-
Luo, J.Y.1
Nikolaev, A.Y.2
Imai, S.3
Chen, D.L.4
Su, F.5
-
36
-
-
0035913903
-
hSIR2(SIRT1) functions as an NAD-dependent p53 deacetylase
-
Vaziri H, Dessain SK, Ng Eaton E, Imai SI, Frye RA, et al. (2001) hSIR2(SIRT1) functions as an NAD-dependent p53 deacetylase. Cell 107: 149-159.
-
(2001)
Cell
, vol.107
, pp. 149-159
-
-
Vaziri, H.1
Dessain, S.K.2
Ng Eaton, E.3
Imai, S.I.4
Frye, R.A.5
-
37
-
-
0037093346
-
Human SIR2 deacetylates p53 and antagonizes PML/p53-induced cellular senescence
-
Langley E, Pearson M, Faretta M, Bauer UM, Frye RA, et al. (2002) Human SIR2 deacetylates p53 and antagonizes PML/p53-induced cellular senescence. EMBO Journal 21: 2383-2396.
-
(2002)
EMBO Journal
, vol.21
, pp. 2383-2396
-
-
Langley, E.1
Pearson, M.2
Faretta, M.3
Bauer, U.M.4
Frye, R.A.5
-
38
-
-
3142740860
-
Calorie restriction promotes mammalian cell survival by inducing the SIRT1 deacetylase
-
Cohen HY, Miller C, Bitterman KJ, Wall NR, Hekking B, et al. (2004) Calorie restriction promotes mammalian cell survival by inducing the SIRT1 deacetylase. Science 305: 390-392.
-
(2004)
Science
, vol.305
, pp. 390-392
-
-
Cohen, H.Y.1
Miller, C.2
Bitterman, K.J.3
Wall, N.R.4
Hekking, B.5
-
39
-
-
33645768490
-
Inhibition of SIRT1 reactivates silenced cancer genes without loss of promoter DNA hypermethylation
-
Pruitt K, Zinn RL, Ohm JE, McGarvey KM, Kang SH, et al. (2006) Inhibition of SIRT1 reactivates silenced cancer genes without loss of promoter DNA hypermethylation. PLoS Genet 2: e40.
-
(2006)
PLoS Genet
, vol.2
-
-
Pruitt, K.1
Zinn, R.L.2
Ohm, J.E.3
McGarvey, K.M.4
Kang, S.H.5
-
40
-
-
4944245398
-
Human SirT1 interacts with histone H1 and promotes formation of facultative heterochromatin
-
Vaquero A, Scher M, Lee D, Erdjument-Bromage H, Tempst P, et al. (2004) Human SirT1 interacts with histone H1 and promotes formation of facultative heterochromatin. Mol Cell 16: 93-105.
-
(2004)
Mol Cell
, vol.16
, pp. 93-105
-
-
Vaquero, A.1
Scher, M.2
Lee, D.3
Erdjument-Bromage, H.4
Tempst, P.5
-
41
-
-
1942502862
-
Different EZH2-containing complexes target methylation of histone H1 or nucleosomal histone H3
-
Kuzmichev A, Jenuwein T, Tempst P, Reinberg D (2004) Different EZH2-containing complexes target methylation of histone H1 or nucleosomal histone H3. Mol Cell 14: 183-193.
-
(2004)
Mol Cell
, vol.14
, pp. 183-193
-
-
Kuzmichev, A.1
Jenuwein, T.2
Tempst, P.3
Reinberg, D.4
-
42
-
-
0037111831
-
Histone methyltransferase activity associated with a human multiprotein complex containing the Enhancer of Zeste protein
-
Kuzmichev A, Nishioka K, Erdjument-Bromage H, Tempst P, Reinberg D (2002) Histone methyltransferase activity associated with a human multiprotein complex containing the Enhancer of Zeste protein. Genes Dev 16: 2893-2905.
-
(2002)
Genes Dev
, vol.16
, pp. 2893-2905
-
-
Kuzmichev, A.1
Nishioka, K.2
Erdjument-Bromage, H.3
Tempst, P.4
Reinberg, D.5
-
43
-
-
13844315463
-
Composition and histone substrates of polycomb repressive group complexes change during cellular differentiation
-
Kuzmichev A, Margueron R, Vaquero A, Preissner TS, Scher M, et al. (2005) Composition and histone substrates of polycomb repressive group complexes change during cellular differentiation. Proc Natl Acad Sci U S A 102: 1859-1864.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 1859-1864
-
-
Kuzmichev, A.1
Margueron, R.2
Vaquero, A.3
Preissner, T.S.4
Scher, M.5
-
44
-
-
36248954501
-
SIRT1 regulates the histone methyl-transferase SUV39H1 during heterochromatin formation
-
Vaquero A, Scher M, Erdjument-Bromage H, Tempst P, Serrano L, et al. (2007) SIRT1 regulates the histone methyl-transferase SUV39H1 during heterochromatin formation. Nature 450: 440-444.
-
(2007)
Nature
, vol.450
, pp. 440-444
-
-
Vaquero, A.1
Scher, M.2
Erdjument-Bromage, H.3
Tempst, P.4
Serrano, L.5
-
45
-
-
0028849277
-
E-cadherin expression is silenced by DNA hypermethylation in human breast and prostate carcinomas
-
Graff JR, Herman JG, Lapidus RG, Chopra H, Xu R, et al. (1995) E-cadherin expression is silenced by DNA hypermethylation in human breast and prostate carcinomas. Cancer Res 55: 5195-5199.
-
(1995)
Cancer Res
, vol.55
, pp. 5195-5199
-
-
Graff, J.R.1
Herman, J.G.2
Lapidus, R.G.3
Chopra, H.4
Xu, R.5
-
46
-
-
0028237305
-
Expression of a site-specific endonuclease stimulates homologous recombination in mammalian cells
-
Rouet P, Smih F, Jasin M (1994) Expression of a site-specific endonuclease stimulates homologous recombination in mammalian cells. Proc Natl Acad Sci U S A 91: 6064-6068.
-
(1994)
Proc Natl Acad Sci U S A
, vol.91
, pp. 6064-6068
-
-
Rouet, P.1
Smih, F.2
Jasin, M.3
-
47
-
-
0032861343
-
Megabase chromatin domains involved in DNA double-strand breaks in vivo
-
Rogakou EP, Boon C, Redon C, Bonner WM (1999) Megabase chromatin domains involved in DNA double-strand breaks in vivo. J Cell Biol 146: 905-916.
-
(1999)
J Cell Biol
, vol.146
, pp. 905-916
-
-
Rogakou, E.P.1
Boon, C.2
Redon, C.3
Bonner, W.M.4
-
48
-
-
0343280013
-
A critical role for histone H2AX in recruitment of repair factors to nuclear foci after DNA damage
-
Paull TT, Rogakou EP, Yamazaki V, Kirchgessner CU, Gellert M, et al. (2000) A critical role for histone H2AX in recruitment of repair factors to nuclear foci after DNA damage. Curr Biol 10: 886-895.
-
(2000)
Curr Biol
, vol.10
, pp. 886-895
-
-
Paull, T.T.1
Rogakou, E.P.2
Yamazaki, V.3
Kirchgessner, C.U.4
Gellert, M.5
-
49
-
-
0142011461
-
The cellular response to DNA double-strand breaks: Defining the sensors and mediators
-
Petrini JH, Stracker TH (2003) The cellular response to DNA double-strand breaks: defining the sensors and mediators. Trends Cell Biol 13: 458-462.
-
(2003)
Trends Cell Biol
, vol.13
, pp. 458-462
-
-
Petrini, J.H.1
Stracker, T.H.2
-
50
-
-
0032544276
-
Telomeres-unsticky ends
-
Shore D (1998) Telomeres-unsticky ends. Science 281: 1818-1819.
-
(1998)
Science
, vol.281
, pp. 1818-1819
-
-
Shore, D.1
-
51
-
-
0030865104
-
Characterization of the p53 tumor suppressor pathway in cell lines of the National Cancer Institute anticancer drug screen and correlations with the growth-inhibitory potency of 123 anticancer agents
-
O'Connor PM, Jackman J, Bae I, Myers TG, Fan S, et al. (1997) Characterization of the p53 tumor suppressor pathway in cell lines of the National Cancer Institute anticancer drug screen and correlations with the growth-inhibitory potency of 123 anticancer agents. Cancer Res 57: 4285-4300.
-
(1997)
Cancer Res
, vol.57
, pp. 4285-4300
-
-
O'Connor, P.M.1
Jackman, J.2
Bae, I.3
Myers, T.G.4
Fan, S.5
-
52
-
-
33644846509
-
Epigenetic gene silencing in cancer - a mechanism for early oncogenic pathway addiction?
-
Baylin SB, Ohm JE (2006) Epigenetic gene silencing in cancer - a mechanism for early oncogenic pathway addiction? Nat Rev Cancer 6: 107-116.
-
(2006)
Nat Rev Cancer
, vol.6
, pp. 107-116
-
-
Baylin, S.B.1
Ohm, J.E.2
-
54
-
-
0041624239
-
Regulated recruitment of HP1 to a euchromatic gene induces mitotically heritable, epigenetic gene silencing: A mammalian cell culture model of gene variegation
-
Ayyanathan K, Lechner MS, Bell P, Maul GG, Schultz DC, et al. (2003) Regulated recruitment of HP1 to a euchromatic gene induces mitotically heritable, epigenetic gene silencing: a mammalian cell culture model of gene variegation. Genes Dev 17: 1855-1869.
-
(2003)
Genes Dev
, vol.17
, pp. 1855-1869
-
-
Ayyanathan, K.1
Lechner, M.S.2
Bell, P.3
Maul, G.G.4
Schultz, D.C.5
-
55
-
-
37549061829
-
LSH cooperates with DNA methyltransferases to repress transcription
-
Myant K, Stancheva I (2008) LSH cooperates with DNA methyltransferases to repress transcription. Mol Cell Biol 28: 215-226.
-
(2008)
Mol Cell Biol
, vol.28
, pp. 215-226
-
-
Myant, K.1
Stancheva, I.2
-
56
-
-
0032948005
-
Synergy of demethylation and histone deacetylase inhibition in the re-expression of genes silenced in cancer
-
Cameron E, Bachman K, Myöhänen S, Herman J, Baylin S (1999) Synergy of demethylation and histone deacetylase inhibition in the re-expression of genes silenced in cancer. Nature Gen 21: 103-107.
-
(1999)
Nature Gen
, vol.21
, pp. 103-107
-
-
Cameron, E.1
Bachman, K.2
Myöhänen, S.3
Herman, J.4
Baylin, S.5
-
57
-
-
0036613250
-
A genomic screen for genes upregulated by demethylation and histone deacetylase inhibition in human colorectal cancer
-
Suzuki H, Gabrielson E, Chen W, Anbazhagan R, van Engeland M, et al. (2002) A genomic screen for genes upregulated by demethylation and histone deacetylase inhibition in human colorectal cancer. Nat Genet 31: 141-149.
-
(2002)
Nat Genet
, vol.31
, pp. 141-149
-
-
Suzuki, H.1
Gabrielson, E.2
Chen, W.3
Anbazhagan, R.4
van Engeland, M.5
-
58
-
-
6944253702
-
SIR2 is required for polycomb silencing and is associated with an E(Z) histone methyltransferase complex
-
Furuyama T, Banerjee R, Breen TR, Harte PJ (2004) SIR2 is required for polycomb silencing and is associated with an E(Z) histone methyltransferase complex. Curr Biol 14: 1812-1821.
-
(2004)
Curr Biol
, vol.14
, pp. 1812-1821
-
-
Furuyama, T.1
Banerjee, R.2
Breen, T.R.3
Harte, P.J.4
-
59
-
-
37549016377
-
A functional link between SIRT1 deacetylase and NBS1 in DNA damage response
-
Yuan Z, Seto E (2007) A functional link between SIRT1 deacetylase and NBS1 in DNA damage response. Cell Cycle 6: 2869-2871.
-
(2007)
Cell Cycle
, vol.6
, pp. 2869-2871
-
-
Yuan, Z.1
Seto, E.2
-
60
-
-
33847647624
-
SIRT1 promotes DNA repair activity and deacetylation of Ku70
-
Jeong J, Juhn K, Lee H, Kim SH, Min BH, et al. (2007) SIRT1 promotes DNA repair activity and deacetylation of Ku70. Exp Mol Med 39: 8-13.
-
(2007)
Exp Mol Med
, vol.39
, pp. 8-13
-
-
Jeong, J.1
Juhn, K.2
Lee, H.3
Kim, S.H.4
Min, B.H.5
-
61
-
-
33846569960
-
A stem cell-like chromatin pattern may predispose tumor suppressor genes to DNA hypermethylation and heritable silencing
-
Ohm JE, McGarvey KM, Yu X, Cheng L, Schuebel KE, et al. (2007) A stem cell-like chromatin pattern may predispose tumor suppressor genes to DNA hypermethylation and heritable silencing. Nat Genet 39: 237-242.
-
(2007)
Nat Genet
, vol.39
, pp. 237-242
-
-
Ohm, J.E.1
McGarvey, K.M.2
Yu, X.3
Cheng, L.4
Schuebel, K.E.5
-
62
-
-
33846649587
-
Polycomb-mediated methylation on Lys27 of histone H3 pre-marks genes for de novo methylation in cancer
-
Schlesinger Y, Straussman R, Keshet I, Farkash S, Hecht M, et al. (2007) Polycomb-mediated methylation on Lys27 of histone H3 pre-marks genes for de novo methylation in cancer. Nat Genet 39: 232-236.
-
(2007)
Nat Genet
, vol.39
, pp. 232-236
-
-
Schlesinger, Y.1
Straussman, R.2
Keshet, I.3
Farkash, S.4
Hecht, M.5
-
63
-
-
33846576622
-
Epigenetic stem cell signature in cancer
-
Widschwendter M, Fiegl H, Egle D, Mueller-Holzner E, Spizzo G, et al. (2007) Epigenetic stem cell signature in cancer. Nat Genet 39: 157-158.
-
(2007)
Nat Genet
, vol.39
, pp. 157-158
-
-
Widschwendter, M.1
Fiegl, H.2
Egle, D.3
Mueller-Holzner, E.4
Spizzo, G.5
-
64
-
-
34248193264
-
Stem cell chromatin patterns: An instructive mechanism for DNA hypermethylation?
-
Ohm JE, Baylin SB (2007) Stem cell chromatin patterns: an instructive mechanism for DNA hypermethylation? Cell Cycle 6: 1040-1043.
-
(2007)
Cell Cycle
, vol.6
, pp. 1040-1043
-
-
Ohm, J.E.1
Baylin, S.B.2
-
65
-
-
34249681648
-
Epigenetic disruption of ribosomal RNA genes and nucleolar architecture in DNA methyltransferase 1 (Dnmt1) deficient cells
-
Espada J, Ballestar E, Santoro R, Fraga MF, Villar-Garea A, et al. (2007) Epigenetic disruption of ribosomal RNA genes and nucleolar architecture in DNA methyltransferase 1 (Dnmt1) deficient cells. Nucleic Acids Res 35: 2191-2198.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 2191-2198
-
-
Espada, J.1
Ballestar, E.2
Santoro, R.3
Fraga, M.F.4
Villar-Garea, A.5
-
66
-
-
32844459336
-
The Polycomb group protein EZH2 directly controls DNA methylation
-
Vire E, Brenner C, Deplus R, Blanchon L, Fraga M, et al. (2006) The Polycomb group protein EZH2 directly controls DNA methylation. Nature 439: 871-874.
-
(2006)
Nature
, vol.439
, pp. 871-874
-
-
Vire, E.1
Brenner, C.2
Deplus, R.3
Blanchon, L.4
Fraga, M.5
-
67
-
-
32444434989
-
Histone H4-K16 acetylation controls chromatin structure and protein interactions
-
Shogren-Knaak M, Ishii H, Sun JM, Pazin MJ, Davie JR, et al. (2006) Histone H4-K16 acetylation controls chromatin structure and protein interactions. Science 311: 844-847.
-
(2006)
Science
, vol.311
, pp. 844-847
-
-
Shogren-Knaak, M.1
Ishii, H.2
Sun, J.M.3
Pazin, M.J.4
Davie, J.R.5
-
68
-
-
44449154833
-
DNA Damage, Homology-Directed Repair, and DNA Methylation
-
Cuozzo C, Porcellini A, Angrisano T, Morano A, Lee B, et al. (2007) DNA Damage, Homology-Directed Repair, and DNA Methylation. PLoS Genet 3: e110.
-
(2007)
PLoS Genet
, vol.3
-
-
Cuozzo, C.1
Porcellini, A.2
Angrisano, T.3
Morano, A.4
Lee, B.5
-
69
-
-
0033945861
-
DNMT1 binds HDAC2 and a new co-repressor, DMAP1, to form a complex at replication foci
-
Rountree MR, Bachman KE, Baylin SB (2000) DNMT1 binds HDAC2 and a new co-repressor, DMAP1, to form a complex at replication foci. Nat Genet 25: 269-277.
-
(2000)
Nat Genet
, vol.25
, pp. 269-277
-
-
Rountree, M.R.1
Bachman, K.E.2
Baylin, S.B.3
-
70
-
-
0035943709
-
Dnmt3a and Dnmt3b are transcriptional repressors that exhibit unique localization properties to heterochromatin
-
Bachman KE, Rountree MR, Baylin SB (2001) Dnmt3a and Dnmt3b are transcriptional repressors that exhibit unique localization properties to heterochromatin. J Biol Chem 276: 32282-32287.
-
(2001)
J Biol Chem
, vol.276
, pp. 32282-32287
-
-
Bachman, K.E.1
Rountree, M.R.2
Baylin, S.B.3
-
71
-
-
0035873225
-
Dnmt3a binds deacetylases and is recruited by a sequence-specific repressor to silence transcription
-
Fuks F, Burgers WA, Godin N, Kasai M, Kouzarides T (2001) Dnmt3a binds deacetylases and is recruited by a sequence-specific repressor to silence transcription. Embo J 20: 2536-2544.
-
(2001)
Embo J
, vol.20
, pp. 2536-2544
-
-
Fuks, F.1
Burgers, W.A.2
Godin, N.3
Kasai, M.4
Kouzarides, T.5
-
72
-
-
0029973718
-
De novo methylation of CpG island sequences in human fibroblasts overexpressing DNA (cytosine-5-)- methyltransferase
-
Vertino PM, Yen RW, Gao J, Baylin SB (1996) De novo methylation of CpG island sequences in human fibroblasts overexpressing DNA (cytosine-5-)- methyltransferase. Mol Cell Biol 16: 4555-4565.
-
(1996)
Mol Cell Biol
, vol.16
, pp. 4555-4565
-
-
Vertino, P.M.1
Yen, R.W.2
Gao, J.3
Baylin, S.B.4
-
73
-
-
31544467813
-
De novo CpG island methylation in human cancer cells
-
Jair KW, Bachman KE, Suzuki H, Ting AH, Rhee I, et al. (2006) De novo CpG island methylation in human cancer cells. Cancer Res 66: 682-692.
-
(2006)
Cancer Res
, vol.66
, pp. 682-692
-
-
Jair, K.W.1
Bachman, K.E.2
Suzuki, H.3
Ting, A.H.4
Rhee, I.5
-
74
-
-
0033615717
-
DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development
-
Okano M, Bell DW, Haber DA, Li E (1999) DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development. Cell 99: 247-257.
-
(1999)
Cell
, vol.99
, pp. 247-257
-
-
Okano, M.1
Bell, D.W.2
Haber, D.A.3
Li, E.4
-
75
-
-
10944233962
-
Recruitment of the INO80 complex by H2A phosphorylation links ATP-dependent chromatin remodeling with DNA double-strand break repair
-
van Attikum H, Fritsch O, Hohn B, Gasser SM (2004) Recruitment of the INO80 complex by H2A phosphorylation links ATP-dependent chromatin remodeling with DNA double-strand break repair. Cell 119: 777-788.
-
(2004)
Cell
, vol.119
, pp. 777-788
-
-
van Attikum, H.1
Fritsch, O.2
Hohn, B.3
Gasser, S.M.4
-
76
-
-
10944224673
-
INO80 and gamma-H2AX interaction links ATP-dependent chromatin remodeling to DNA damage repair
-
Morrison AJ, Highland J, Krogan NJ, Arbel-Eden A, Greenblatt JF, et al. (2004) INO80 and gamma-H2AX interaction links ATP-dependent chromatin remodeling to DNA damage repair. Cell 119: 767-775.
-
(2004)
Cell
, vol.119
, pp. 767-775
-
-
Morrison, A.J.1
Highland, J.2
Krogan, N.J.3
Arbel-Eden, A.4
Greenblatt, J.F.5
-
77
-
-
27844607415
-
Chromatin remodelling at a DNA double-strand break site in Saccharomyces cerevisiae
-
Tsukuda T, Fleming AB, Nickoloff JA, Osley MA (2005) Chromatin remodelling at a DNA double-strand break site in Saccharomyces cerevisiae. Nature 438: 379-383.
-
(2005)
Nature
, vol.438
, pp. 379-383
-
-
Tsukuda, T.1
Fleming, A.B.2
Nickoloff, J.A.3
Osley, M.A.4
-
78
-
-
29244434544
-
MDC1 directly binds phosphorylated histone H2AX to regulate cellular responses to DNA double-strand breaks
-
Stucki M, Clapperton JA, Mohammad D, Yaffe MB, Smerdon SJ, et al. (2005) MDC1 directly binds phosphorylated histone H2AX to regulate cellular responses to DNA double-strand breaks. Cell 123: 1213-1226.
-
(2005)
Cell
, vol.123
, pp. 1213-1226
-
-
Stucki, M.1
Clapperton, J.A.2
Mohammad, D.3
Yaffe, M.B.4
Smerdon, S.J.5
-
79
-
-
1242342224
-
Saccharomyces cerevisiae Sin3p facilitates DNA double-strand break repair
-
Jazayeri A, McAinsh AD, Jackson SP (2004) Saccharomyces cerevisiae Sin3p facilitates DNA double-strand break repair. Proc Natl Acad Sci U S A 101: 1644-1649.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 1644-1649
-
-
Jazayeri, A.1
McAinsh, A.D.2
Jackson, S.P.3
-
80
-
-
15944365507
-
Role of NAD-dependent deacetylases SIRT1 and SIRT2 in radiation and cisplatininduced cell death in vertebrate cells
-
Matsushita N, Takami Y, Kimura M, Tachiiri S, Ishiai M, et al. (2005) Role of NAD-dependent deacetylases SIRT1 and SIRT2 in radiation and cisplatininduced cell death in vertebrate cells. Genes Cells 10: 321-332.
-
(2005)
Genes Cells
, vol.10
, pp. 321-332
-
-
Matsushita, N.1
Takami, Y.2
Kimura, M.3
Tachiiri, S.4
Ishiai, M.5
-
81
-
-
33847035824
-
Phosphorylation of HuR by Chk2 regulates SIRT1 expression
-
Abdelmohsen K, Pullmann R Jr, Lal A, Kim HH, Galban S, et al. (2007) Phosphorylation of HuR by Chk2 regulates SIRT1 expression. Mol Cell 25: 543-557.
-
(2007)
Mol Cell
, vol.25
, pp. 543-557
-
-
Abdelmohsen, K.1
Pullmann Jr, R.2
Lal, A.3
Kim, H.H.4
Galban, S.5
-
82
-
-
18244397746
-
Quantification of MYCN, DDX1, and NAG gene copy number in neuroblastoma using a real-time quantitative PCR assay
-
De Preter K, Speleman F, Combaret V, Lunec J, Laureys G, et al. (2002) Quantification of MYCN, DDX1, and NAG gene copy number in neuroblastoma using a real-time quantitative PCR assay. Mod Pathol 15: 159-166.
-
(2002)
Mod Pathol
, vol.15
, pp. 159-166
-
-
De Preter, K.1
Speleman, F.2
Combaret, V.3
Lunec, J.4
Laureys, G.5
-
83
-
-
0037115392
-
Dependence of histone modifications and gene expression on DNA hypermethylation in cancer
-
Fahrner JA, Eguchi S, Herman JG, Baylin SB (2002) Dependence of histone modifications and gene expression on DNA hypermethylation in cancer. Cancer Res 62: 7213-7218.
-
(2002)
Cancer Res
, vol.62
, pp. 7213-7218
-
-
Fahrner, J.A.1
Eguchi, S.2
Herman, J.G.3
Baylin, S.B.4
-
84
-
-
12144291274
-
Epigenetic inactivation of SFRP genes allows constitutive WNT signaling in colorectal cancer
-
Suzuki H, Watkins DN, Jair KW, Schuebel KE, Markowitz SD, et al. (2004) Epigenetic inactivation of SFRP genes allows constitutive WNT signaling in colorectal cancer. Nat Genet 36: 417-422.
-
(2004)
Nat Genet
, vol.36
, pp. 417-422
-
-
Suzuki, H.1
Watkins, D.N.2
Jair, K.W.3
Schuebel, K.E.4
Markowitz, S.D.5
|