-
1
-
-
33144470077
-
Differential expression of novel naturally occurring splice variants of PTEN and their functional consequences in Cowden syndrome and sporadic breast cancer
-
Agrawal, S. and Eng, C. 2006. Differential expression of novel naturally occurring splice variants of PTEN and their functional consequences in Cowden syndrome and sporadic breast cancer. Hum. Mol. Genet. 15: 777-787.
-
(2006)
Hum. Mol. Genet
, vol.15
, pp. 777-787
-
-
Agrawal, S.1
Eng, C.2
-
2
-
-
32044434957
-
Features of Arabidopsis genes and genome discovered using full-length cDNAs
-
Alexandrov, N.N., Troukhan, M.E., Brover, V.V., Tatarinova, T., Flavell, R.B., and Feldmann, K.A. 2006. Features of Arabidopsis genes and genome discovered using full-length cDNAs. Plant Mol. Biol. 60: 69-85.
-
(2006)
Plant Mol. Biol
, vol.60
, pp. 69-85
-
-
Alexandrov, N.N.1
Troukhan, M.E.2
Brover, V.V.3
Tatarinova, T.4
Flavell, R.B.5
Feldmann, K.A.6
-
3
-
-
5044222204
-
How did alternative splicing evolve?
-
Ast, G. 2004. How did alternative splicing evolve? Nat. Rev. Genet. 5: 773-782.
-
(2004)
Nat. Rev. Genet
, vol.5
, pp. 773-782
-
-
Ast, G.1
-
4
-
-
34548680499
-
Characterization of Arabidopsis thaliana genes encoding functional homologues of the yeast metal chaperone Cox19p, involved in cytochrome c oxidase biogenesis
-
Attallah, C.V., Welchen, E., Pujol, C., Bonnard, G., and Gonzalez, D.H. 2007. Characterization of Arabidopsis thaliana genes encoding functional homologues of the yeast metal chaperone Cox19p, involved in cytochrome c oxidase biogenesis. Plant Mol. Biol. 65: 343-355.
-
(2007)
Plant Mol. Biol
, vol.65
, pp. 343-355
-
-
Attallah, C.V.1
Welchen, E.2
Pujol, C.3
Bonnard, G.4
Gonzalez, D.H.5
-
5
-
-
33749604245
-
Analysis of the prostate cancer cell line LNCaP transcriptome using a sequencing-by-synthesis approach
-
doi: 10.1186/1471-2164-7-246
-
Bainbridge, M.N., Warren, R.L., Hirst, M., Romanuik, T., Zeng, T., Go, A., Delaney, A., Griffith, M., Hickenbotham, M., Magrini, V., et al. 2006. Analysis of the prostate cancer cell line LNCaP transcriptome using a sequencing-by-synthesis approach. BMC Genomics 7: 246. doi: 10.1186/1471-2164-7-246.
-
(2006)
BMC Genomics
, vol.7
, pp. 246
-
-
Bainbridge, M.N.1
Warren, R.L.2
Hirst, M.3
Romanuik, T.4
Zeng, T.5
Go, A.6
Delaney, A.7
Griffith, M.8
Hickenbotham, M.9
Magrini, V.10
-
6
-
-
0028125262
-
Mammalian nonsense codons can be cis effectors of nuclear mRNA half-life
-
Belgrader, P., Cheng, J., Zhou, X., Stephenson, L.S., and Maquat, L.E. 1994. Mammalian nonsense codons can be cis effectors of nuclear mRNA half-life. Mol. Cell. Biol. 14: 8219-8228.
-
(1994)
Mol. Cell. Biol
, vol.14
, pp. 8219-8228
-
-
Belgrader, P.1
Cheng, J.2
Zhou, X.3
Stephenson, L.S.4
Maquat, L.E.5
-
7
-
-
0036591882
-
The mRNA assembly line: Transcription and processing machines in the same factory
-
Bentley, D. 2002. The mRNA assembly line: Transcription and processing machines in the same factory. Curr. Opin. Cell Biol. 14: 336-342.
-
(2002)
Curr. Opin. Cell Biol
, vol.14
, pp. 336-342
-
-
Bentley, D.1
-
8
-
-
0028895417
-
Exon recognition in vertebrate splicing
-
Berget, S.M. 1995. Exon recognition in vertebrate splicing. J. Biol. Chem. 270: 2411-2414.
-
(1995)
J. Biol. Chem
, vol.270
, pp. 2411-2414
-
-
Berget, S.M.1
-
9
-
-
0344622123
-
Spliced segments at the 5′ terminus of adenovirus 2 late mRNA
-
Berget, S.M., Moore, C., and Sharp, P.A. 1977. Spliced segments at the 5′ terminus of adenovirus 2 late mRNA. Proc. Natl. Acad. Sci. 74: 3171-3175.
-
(1977)
Proc. Natl. Acad. Sci
, vol.74
, pp. 3171-3175
-
-
Berget, S.M.1
Moore, C.2
Sharp, P.A.3
-
10
-
-
0034625046
-
Rapid evolution in plant chitinases: Molecular targets of selection in plant-pathogen coevolution
-
Bishop, J.G., Dean, A.M., and Mitchell-Olds, T. 2000. Rapid evolution in plant chitinases: Molecular targets of selection in plant-pathogen coevolution. Proc. Natl. Acad. Sci. 97: 5322-5327.
-
(2000)
Proc. Natl. Acad. Sci
, vol.97
, pp. 5322-5327
-
-
Bishop, J.G.1
Dean, A.M.2
Mitchell-Olds, T.3
-
11
-
-
0013394889
-
Mechanisms of alternative pre-messenger RNA splicing
-
Black, D.L. 2003. Mechanisms of alternative pre-messenger RNA splicing. Annu. Rev. Biochem. 72: 291-336.
-
(2003)
Annu. Rev. Biochem
, vol.72
, pp. 291-336
-
-
Black, D.L.1
-
12
-
-
3142700743
-
Widespread paleopolyploidy in model plant species inferred from age distributions of duplicate genes
-
Blanc, G. and Wolfe, K.H. 2004. Widespread paleopolyploidy in model plant species inferred from age distributions of duplicate genes. Plant Cell 16: 1667-1678.
-
(2004)
Plant Cell
, vol.16
, pp. 1667-1678
-
-
Blanc, G.1
Wolfe, K.H.2
-
13
-
-
22344458119
-
Global analysis of positive and negative pre-mRNA splicing regulators in Drosophila
-
Blanchette, M., Green, R.E., Brenner, S.E., and Rio, D.C. 2005. Global analysis of positive and negative pre-mRNA splicing regulators in Drosophila. Genes & Dev. 19: 1306-1314.
-
(2005)
Genes & Dev
, vol.19
, pp. 1306-1314
-
-
Blanchette, M.1
Green, R.E.2
Brenner, S.E.3
Rio, D.C.4
-
14
-
-
33745899048
-
Alternative splicing: New insights from global analyses
-
Blencowe, B.J. 2006. Alternative splicing: New insights from global analyses. Cell 126: 37-47.
-
(2006)
Cell
, vol.126
, pp. 37-47
-
-
Blencowe, B.J.1
-
15
-
-
14644431487
-
Broad specificity of SR (serine/arginine) proteins in the regulation of alternative splicing of pre-messenger RNA
-
Bourgeois, C.F., Lejeune, F., and Stevenin, J. 2004. Broad specificity of SR (serine/arginine) proteins in the regulation of alternative splicing of pre-messenger RNA. Prog. Nucleic Acid Res. Mol. Biol. 78: 37-88.
-
(2004)
Prog. Nucleic Acid Res. Mol. Biol
, vol.78
, pp. 37-88
-
-
Bourgeois, C.F.1
Lejeune, F.2
Stevenin, J.3
-
16
-
-
0036338127
-
Alternative splicing and genome complexity
-
Brett, D., Pospisil, H., Valcarcel, J., Reich, J., and Bork, P. 2002. Alternative splicing and genome complexity. Nat. Genet. 30: 29-30.
-
(2002)
Nat. Genet
, vol.30
, pp. 29-30
-
-
Brett, D.1
Pospisil, H.2
Valcarcel, J.3
Reich, J.4
Bork, P.5
-
17
-
-
20344407697
-
Evolution of DNA sequence nonhomologies among maize inbreds
-
Brunner, S., Fengler, K., Morgante, M., Tingey, S., and Rafalski, A. 2005. Evolution of DNA sequence nonhomologies among maize inbreds. Plant Cell 17: 343-360.
-
(2005)
Plant Cell
, vol.17
, pp. 343-360
-
-
Brunner, S.1
Fengler, K.2
Morgante, M.3
Tingey, S.4
Rafalski, A.5
-
18
-
-
0036534129
-
Alternative splicing: Multiple control mechanisms and involvement in human disease
-
Caceres, J.F. and Kornblihtt, A.R. 2002. Alternative splicing: Multiple control mechanisms and involvement in human disease. Trends Genet. 18: 186-193.
-
(2002)
Trends Genet
, vol.18
, pp. 186-193
-
-
Caceres, J.F.1
Kornblihtt, A.R.2
-
19
-
-
33846573830
-
Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis
-
doi: 10.1186/1471-2164-7-327
-
Campbell, M.A., Haas, B.J., Hamilton, J.P., Mount, S.M., and Buell, C.R. 2006. Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis. BMC Genomics 7: 327. doi: 10.1186/1471-2164-7-327.
-
(2006)
BMC Genomics
, vol.7
, pp. 327
-
-
Campbell, M.A.1
Haas, B.J.2
Hamilton, J.P.3
Mount, S.M.4
Buell, C.R.5
-
20
-
-
0036207384
-
Listening to silence and understanding nonsense: Exonic mutations that affect splicing
-
Cartegni, L., Chew, S.L., and Krainer, A.R. 2002. Listening to silence and understanding nonsense: Exonic mutations that affect splicing. Nat. Rev. Genet. 3: 285-298.
-
(2002)
Nat. Rev. Genet
, vol.3
, pp. 285-298
-
-
Cartegni, L.1
Chew, S.L.2
Krainer, A.R.3
-
21
-
-
2442517979
-
Dating the monocot-dicot divergence and the origin of core eudicots using whole chloroplast genomes
-
Chaw, S.M., Chang, C.C., Chen, H.L., and Li, W.H. 2004. Dating the monocot-dicot divergence and the origin of core eudicots using whole chloroplast genomes. J. Mol. Evol. 58: 424-441.
-
(2004)
J. Mol. Evol
, vol.58
, pp. 424-441
-
-
Chaw, S.M.1
Chang, C.C.2
Chen, H.L.3
Li, W.H.4
-
22
-
-
33751017957
-
Sequencing Medicago truncatula expressed sequenced tags using 454 Life Sciences technology
-
doi: 10.1186/1471-2164-7-272
-
Cheung, F., Haas, B.J., Goldberg, S.M., May, G.D., Xiao, Y., and Town, C.D. 2006. Sequencing Medicago truncatula expressed sequenced tags using 454 Life Sciences technology. BMC Genomics 7: 272. doi: 10.1186/1471-2164-7-272.
-
(2006)
BMC Genomics
, vol.7
, pp. 272
-
-
Cheung, F.1
Haas, B.J.2
Goldberg, S.M.3
May, G.D.4
Xiao, Y.5
Town, C.D.6
-
23
-
-
34248662670
-
When gene marriages don't work out: Divorce by subfunctionalization
-
Cusack, B.P. and Wolfe, K.H. 2007. When gene marriages don't work out: Divorce by subfunctionalization. Trends Genet. 23: 270-272.
-
(2007)
Trends Genet
, vol.23
, pp. 270-272
-
-
Cusack, B.P.1
Wolfe, K.H.2
-
24
-
-
0033178886
-
Intron-exon structures of eukaryotic model organisms
-
Deutsch, M. and Long, M. 1999. Intron-exon structures of eukaryotic model organisms. Nucleic Acids Res. 27: 3219-3228.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 3219-3228
-
-
Deutsch, M.1
Long, M.2
-
25
-
-
0025475589
-
Analysis of the genes encoding the largest subunit of RNA polymerase II in Arabidopsis and soybean
-
Dietrich, M.A., Prenger, J.P., and Guilfoyle, T.J. 1990. Analysis of the genes encoding the largest subunit of RNA polymerase II in Arabidopsis and soybean. Plant Mol. Biol. 15: 207-223.
-
(1990)
Plant Mol. Biol
, vol.15
, pp. 207-223
-
-
Dietrich, M.A.1
Prenger, J.P.2
Guilfoyle, T.J.3
-
26
-
-
0018896724
-
Two mRNAs can be produced from a single immunoglobulin mu gene by alternative RNA processing pathways
-
Early, P., Rogers, J., Davis, M., Calame, K., Bond, M., Wall, R., and Hood, L. 1980. Two mRNAs can be produced from a single immunoglobulin mu gene by alternative RNA processing pathways. Cell 20: 313-319.
-
(1980)
Cell
, vol.20
, pp. 313-319
-
-
Early, P.1
Rogers, J.2
Davis, M.3
Calame, K.4
Bond, M.5
Wall, R.6
Hood, L.7
-
27
-
-
33744951518
-
Differential regulation of transcript accumulation and alternative splicing of a DREB2 homolog under abiotic stress conditions in common wheat
-
Egawa, C., Kobayashi, F., Ishibashi, M., Nakamura, T., Nakamura, C., and Takumi, S. 2006. Differential regulation of transcript accumulation and alternative splicing of a DREB2 homolog under abiotic stress conditions in common wheat. Genes Genet. Syst. 81: 77-91.
-
(2006)
Genes Genet. Syst
, vol.81
, pp. 77-91
-
-
Egawa, C.1
Kobayashi, F.2
Ishibashi, M.3
Nakamura, T.4
Nakamura, C.5
Takumi, S.6
-
28
-
-
33845984917
-
Gene discovery and annotation using LCM-454 transcriptome sequencing
-
Emrich, S.J., Barbazuk, W.B., Li, L., and Schnable, P.S. 2007. Gene discovery and annotation using LCM-454 transcriptome sequencing. Genome Res. 17: 69-73.
-
(2007)
Genome Res
, vol.17
, pp. 69-73
-
-
Emrich, S.J.1
Barbazuk, W.B.2
Li, L.3
Schnable, P.S.4
-
29
-
-
24744442994
-
Quality assessment of maize assembled genomic islands (MAGIs) and large-scale experimental verification of predicted genes
-
Fu, Y., Emrich, S.J., Guo, L., Wen, T.J., Ashlock, D.A., Aluru, S., and Schnable, P.S. 2005. Quality assessment of maize assembled genomic islands (MAGIs) and large-scale experimental verification of predicted genes. Proc. Natl. Acad. Sci. 102: 12282-12287.
-
(2005)
Proc. Natl. Acad. Sci
, vol.102
, pp. 12282-12287
-
-
Fu, Y.1
Emrich, S.J.2
Guo, L.3
Wen, T.J.4
Ashlock, D.A.5
Aluru, S.6
Schnable, P.S.7
-
30
-
-
0030220476
-
Structure and expression of a plant U1 snRNP 70K gene: Alternative splicing of U1 snRNP 70K pre-mRNAs produces two different transcripts
-
Golovkin, M. and Reddy, A.S. 1996. Structure and expression of a plant U1 snRNP 70K gene: Alternative splicing of U1 snRNP 70K pre-mRNAs produces two different transcripts. Plant Cell 8: 1421-1435.
-
(1996)
Plant Cell
, vol.8
, pp. 1421-1435
-
-
Golovkin, M.1
Reddy, A.S.2
-
31
-
-
33745207758
-
Comparative analysis identifies exonic splicing regulatory sequences - The complex definition of enhancers and silencers
-
Goren, A., Ram, O., Amit, M., Keren, H., Lev-Maor, G., Vig, I., Pupko, T., and Ast, G. 2006. Comparative analysis identifies exonic splicing regulatory sequences - The complex definition of enhancers and silencers. Mol. Cell 22: 769-781.
-
(2006)
Mol. Cell
, vol.22
, pp. 769-781
-
-
Goren, A.1
Ram, O.2
Amit, M.3
Keren, H.4
Lev-Maor, G.5
Vig, I.6
Pupko, T.7
Ast, G.8
-
32
-
-
0029360656
-
Organ-specific differences in the ratio of alternatively spliced chorismate synthase (LeCS2) transcripts in tomato
-
Gorlach, J., Raesecke, H.R., Abel, G., Wehrli, R., Amrhein, N., and Schmid, J. 1995. Organ-specific differences in the ratio of alternatively spliced chorismate synthase (LeCS2) transcripts in tomato. Plant J. 8: 451-456.
-
(1995)
Plant J
, vol.8
, pp. 451-456
-
-
Gorlach, J.1
Raesecke, H.R.2
Abel, G.3
Wehrli, R.4
Amrhein, N.5
Schmid, J.6
-
33
-
-
4444270781
-
Genome wide identification and classification of alternative splicing based on EST data
-
Gupta, S., Zink, D., Korn, B., Vingron, M., and Haas, S.A. 2004. Genome wide identification and classification of alternative splicing based on EST data. Bioinformatics 20: 2579-2585.
-
(2004)
Bioinformatics
, vol.20
, pp. 2579-2585
-
-
Gupta, S.1
Zink, D.2
Korn, B.3
Vingron, M.4
Haas, S.A.5
-
34
-
-
17844406653
-
A novel class of Helitron-related transposable elements in maize contain portions of multiple pseudogenes
-
Gupta, S., Gallavotti, A., Stryker, G.A., Schmidt, R.J., and Lal, S.K. 2005. A novel class of Helitron-related transposable elements in maize contain portions of multiple pseudogenes. Plant Mol. Biol. 57: 115-127.
-
(2005)
Plant Mol. Biol
, vol.57
, pp. 115-127
-
-
Gupta, S.1
Gallavotti, A.2
Stryker, G.A.3
Schmidt, R.J.4
Lal, S.K.5
-
35
-
-
0141905891
-
Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies
-
Haas, B.J., Delcher, A.L., Mount, S.M., Wortman, J.R., Smith Jr., R.K., Hannick, L.I., Maiti, R., Ronning, C.M., Rusch, D.B., Town, C.D., et al. 2003. Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies. Nucleic Acids Res. 31: 5654-5666.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 5654-5666
-
-
Haas, B.J.1
Delcher, A.L.2
Mount, S.M.3
Wortman, J.R.4
Smith Jr., R.K.5
Hannick, L.I.6
Maiti, R.7
Ronning, C.M.8
Rusch, D.B.9
Town, C.D.10
-
36
-
-
33344470688
-
Structure and architecture of the maize genome
-
Haberer, G., Young, S., Bharti, A.K., Gundlach, H., Raymond, C., Fuks, G., Butler, E., Wing, R.A., Rounsley, S., Birren, B., et al. 2005. Structure and architecture of the maize genome. Plant Physiol. 139: 1612-1624.
-
(2005)
Plant Physiol
, vol.139
, pp. 1612-1624
-
-
Haberer, G.1
Young, S.2
Bharti, A.K.3
Gundlach, H.4
Raymond, C.5
Fuks, G.6
Butler, E.7
Wing, R.A.8
Rounsley, S.9
Birren, B.10
-
38
-
-
0029039895
-
Characterization of the major transcripts encoded by the regulatory MuDR transposable element of maize
-
Hershberger, R.J., Benito, M.I., Hardeman, K.J., Warren, C., Chandler, V.L., and Walbot, V. 1995. Characterization of the major transcripts encoded by the regulatory MuDR transposable element of maize. Genetics 140: 1087-1098.
-
(1995)
Genetics
, vol.140
, pp. 1087-1098
-
-
Hershberger, R.J.1
Benito, M.I.2
Hardeman, K.J.3
Warren, C.4
Chandler, V.L.5
Walbot, V.6
-
39
-
-
0034924450
-
Predicting splice variant from DNA chip expression data
-
Hu, G.K., Madore, S.J., Moldover, B., Jatkoe, T., Balaban, D., Thomas, J., and Wang, Y. 2001. Predicting splice variant from DNA chip expression data. Genome Res. 11: 1237-1245.
-
(2001)
Genome Res
, vol.11
, pp. 1237-1245
-
-
Hu, G.K.1
Madore, S.J.2
Moldover, B.3
Jatkoe, T.4
Balaban, D.5
Thomas, J.6
Wang, Y.7
-
40
-
-
4844222571
-
Genome-wide analysis of alternative pre-mRNA splicing in Arabidopsis thaliana based on full-length cDNA sequences
-
Iida, K., Seki, M., Sakurai, T., Satou, M., Akiyama, K., Toyoda, T., Konagaya, A., and Shinozaki, K. 2004. Genome-wide analysis of alternative pre-mRNA splicing in Arabidopsis thaliana based on full-length cDNA sequences. Nucleic Acids Res. 32: 5096-5103.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 5096-5103
-
-
Iida, K.1
Seki, M.2
Sakurai, T.3
Satou, M.4
Akiyama, K.5
Toyoda, T.6
Konagaya, A.7
Shinozaki, K.8
-
41
-
-
84907150192
-
The map-based sequence of the rice genome
-
International Rice Genome Sequencing Project
-
International Rice Genome Sequencing Project. 2005. The map-based sequence of the rice genome. Nature 436: 793-800.
-
(2005)
Nature
, vol.436
, pp. 793-800
-
-
-
42
-
-
36349026377
-
Functional and evolutionary analysis of alternatively spliced genes is consistent with an early eukaryotic origin of alternative splicing
-
doi: 10.1186/1471-2148-7-188
-
Irimia, M., Rukov, J.L., Penny, D., and Roy, S.W. 2007. Functional and evolutionary analysis of alternatively spliced genes is consistent with an early eukaryotic origin of alternative splicing. BMC Evol. Biol. 7: 188. doi: 10.1186/1471-2148-7-188.
-
(2007)
BMC Evol. Biol
, vol.7
, pp. 188
-
-
Irimia, M.1
Rukov, J.L.2
Penny, D.3
Roy, S.W.4
-
43
-
-
38949095296
-
Widespread evolutionary conservation of alternatively spliced exons in Caenorhabditis
-
Irimia, M., Rukov, J.L., Penny, D., Garcia-Fernandez, J., Vinther, J., and Roy, S.W. 2008. Widespread evolutionary conservation of alternatively spliced exons in Caenorhabditis. Mol. Biol. Evol. 25: 375-382.
-
(2008)
Mol. Biol. Evol
, vol.25
, pp. 375-382
-
-
Irimia, M.1
Rukov, J.L.2
Penny, D.3
Garcia-Fernandez, J.4
Vinther, J.5
Roy, S.W.6
-
44
-
-
4944239027
-
Pack-MULE transposable elements mediate gene evolution in plants
-
Jiang, N., Bao, Z., Zhang, X., Eddy, S.R., and Wessler, S.R. 2004. Pack-MULE transposable elements mediate gene evolution in plants. Nature 431: 569-573.
-
(2004)
Nature
, vol.431
, pp. 569-573
-
-
Jiang, N.1
Bao, Z.2
Zhang, X.3
Eddy, S.R.4
Wessler, S.R.5
-
45
-
-
0347623371
-
Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays
-
Johnson, J.M., Castle, J., Garrett-Engele, P., Kan, Z., Loerch, P.M., Armour, C.D., Santos, R., Schadt, E.E., Stoughton, R., and Shoemaker, D.D. 2003. Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays. Science 302: 2141-2144.
-
(2003)
Science
, vol.302
, pp. 2141-2144
-
-
Johnson, J.M.1
Castle, J.2
Garrett-Engele, P.3
Kan, Z.4
Loerch, P.M.5
Armour, C.D.6
Santos, R.7
Schadt, E.E.8
Stoughton, R.9
Shoemaker, D.D.10
-
46
-
-
0036436733
-
Capturing splicing complexes to study structure and mechanism
-
Jurica, M.S. and Moore, M.J. 2002. Capturing splicing complexes to study structure and mechanism. Methods 28: 336-345.
-
(2002)
Methods
, vol.28
, pp. 336-345
-
-
Jurica, M.S.1
Moore, M.J.2
-
47
-
-
33750029727
-
Evolutionary conservation and regulation of particular alternative splicing events in plant SR proteins
-
Kalyna, M., Lopato, S., Voronin, V., and Barta, A. 2006. Evolutionary conservation and regulation of particular alternative splicing events in plant SR proteins. Nucleic Acids Res. 34: 4395-4405.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 4395-4405
-
-
Kalyna, M.1
Lopato, S.2
Voronin, V.3
Barta, A.4
-
48
-
-
12144287461
-
Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22
-
Kampa, D., Cheng, J., Kapranov, P., Yamanaka, M., Brubaker, S., Cawley, S., Drenkow, J., Piccolboni, A., Bekiranov, S., Helt, G., et al. 2004. Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22. Genome Res. 14: 331-342.
-
(2004)
Genome Res
, vol.14
, pp. 331-342
-
-
Kampa, D.1
Cheng, J.2
Kapranov, P.3
Yamanaka, M.4
Brubaker, S.5
Cawley, S.6
Drenkow, J.7
Piccolboni, A.8
Bekiranov, S.9
Helt, G.10
-
49
-
-
0037012881
-
Large-scale transcriptional activity in chromosomes 21 and 22
-
Kapranov, P., Cawley, S.E., Drenkow, J., Bekiranov, S., Strausberg, R.L., Fodor, S.P., and Gingeras, T.R. 2002. Large-scale transcriptional activity in chromosomes 21 and 22. Science 296: 916-919.
-
(2002)
Science
, vol.296
, pp. 916-919
-
-
Kapranov, P.1
Cawley, S.E.2
Drenkow, J.3
Bekiranov, S.4
Strausberg, R.L.5
Fodor, S.P.6
Gingeras, T.R.7
-
50
-
-
33846681383
-
Different levels of alternative splicing among eukaryotes
-
Kim, E., Magen, A., and Ast, G. 2007. Different levels of alternative splicing among eukaryotes. Nucleic Acids Res. 35: 125-131.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 125-131
-
-
Kim, E.1
Magen, A.2
Ast, G.3
-
51
-
-
0028289188
-
Protein-protein interactions and 5-splice-site recognition in mammalian mRNA precursors
-
Kohtz, J.D., Jamison, S.F., Will, C.L., Zuo, P., Luhrmann, R., Garcia-Blanco, M.A., and Manley, J.L. 1994. Protein-protein interactions and 5-splice-site recognition in mammalian mRNA precursors. Nature 368: 119-124.
-
(1994)
Nature
, vol.368
, pp. 119-124
-
-
Kohtz, J.D.1
Jamison, S.F.2
Will, C.L.3
Zuo, P.4
Luhrmann, R.5
Garcia-Blanco, M.A.6
Manley, J.L.7
-
52
-
-
0029360431
-
Alternative splicing results in two different transcripts for H-protein of the glycine cleavage system in the C4 species Flaveria trinervia
-
Kopriva, S., Cossu, R., and Bauwe, H. 1995. Alternative splicing results in two different transcripts for H-protein of the glycine cleavage system in the C4 species Flaveria trinervia. Plant J. 8: 435-441.
-
(1995)
Plant J
, vol.8
, pp. 435-441
-
-
Kopriva, S.1
Cossu, R.2
Bauwe, H.3
-
53
-
-
2942544417
-
Gene finding in novel genomes
-
doi: 10.1186/1471-2105-5-59
-
Korf, I. 2004. Gene finding in novel genomes. BMC Bioinformatics 5: 59. doi: 10.1186/1471-2105-5-59.
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 59
-
-
Korf, I.1
-
54
-
-
33746300556
-
A simplified explanation for the frameshift mutation that created a novel C-terminal motif in the APETALA3 gene lineage
-
doi: 10.1186/1471-2148-6-30
-
Kramer, E.M., Su, H.J., Wu, C.C., and Hu, J.M. 2006. A simplified explanation for the frameshift mutation that created a novel C-terminal motif in the APETALA3 gene lineage. BMC Evol. Biol. 6: 30. doi: 10.1186/1471-2148-6-30.
-
(2006)
BMC Evol. Biol
, vol.6
, pp. 30
-
-
Kramer, E.M.1
Su, H.J.2
Wu, C.C.3
Hu, J.M.4
-
55
-
-
0036429269
-
-
Ladd, A.N. and Cooper, T.A. 2002. Finding signals that regulate alternative splicing in the post-genomic era. Genome Biol. 3: reviews0008. doi: 10.1186/gb-2003-3-11-reviews0008.
-
Ladd, A.N. and Cooper, T.A. 2002. Finding signals that regulate alternative splicing in the post-genomic era. Genome Biol. 3: reviews0008. doi: 10.1186/gb-2003-3-11-reviews0008.
-
-
-
-
56
-
-
21144454436
-
Gene movement by Helitron transposons contributes to the haplotype variability of maize
-
Lai, J., Li, Y., Messing, J., and Dooner, H.K. 2005. Gene movement by Helitron transposons contributes to the haplotype variability of maize. Proc. Natl. Acad. Sci. 102: 9068-9073.
-
(2005)
Proc. Natl. Acad. Sci
, vol.102
, pp. 9068-9073
-
-
Lai, J.1
Li, Y.2
Messing, J.3
Dooner, H.K.4
-
57
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
Lander, E.S.L.M., Linton, B., Birren, C., Nusbaum, M.C., Zody, J., Baldwin, K., Devon, K., Dewar, M., Doyle, W., FitzHugh, R., et al. 2001. Initial sequencing and analysis of the human genome. Nature 409: 860-921.
-
(2001)
Nature
, vol.409
, pp. 860-921
-
-
Lander, E.S.L.M.1
Linton, B.2
Birren, C.3
Nusbaum, M.C.4
Zody, J.5
Baldwin, K.6
Devon, K.7
Dewar, M.8
Doyle, W.9
FitzHugh, R.10
-
58
-
-
34247330971
-
Unproductive splicing of SR genes associated with highly conserved and ultraconserved DNA elements
-
Lareau, L.F., Inada, M., Green, R.E., Wengrod, J.C., and Brenner, S.E. 2007. Unproductive splicing of SR genes associated with highly conserved and ultraconserved DNA elements. Nature 446: 926-929.
-
(2007)
Nature
, vol.446
, pp. 926-929
-
-
Lareau, L.F.1
Inada, M.2
Green, R.E.3
Wengrod, J.C.4
Brenner, S.E.5
-
59
-
-
16544378889
-
Detecting tissue-specific regulation of alternative splicing as a qualitative change in microarray data
-
doi: 10.1093/nar/gnh173
-
Le, K., Mitsouras, K., Roy, M., Wang, Q., Xu, Q., Nelson, S.F., and Lee, C. 2004. Detecting tissue-specific regulation of alternative splicing as a qualitative change in microarray data. Nucleic Acids Res. 32: e180. doi: 10.1093/nar/gnh173.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Le, K.1
Mitsouras, K.2
Roy, M.3
Wang, Q.4
Xu, Q.5
Nelson, S.F.6
Lee, C.7
-
60
-
-
26944490380
-
Conservation and divergence of FCA function between Arabidopsis and rice
-
Lee, J.H., Cho, Y.S., Yoon, H.S., Suh, M.C., Moon, J., Lee, I., Weigel, D., Yun, C.H., and Kim, J.K. 2005. Conservation and divergence of FCA function between Arabidopsis and rice. Plant Mol. Biol. 58: 823-838.
-
(2005)
Plant Mol. Biol
, vol.58
, pp. 823-838
-
-
Lee, J.H.1
Cho, Y.S.2
Yoon, H.S.3
Suh, M.C.4
Moon, J.5
Lee, I.6
Weigel, D.7
Yun, C.H.8
Kim, J.K.9
-
61
-
-
3843111257
-
The Alternative Splicing Gallery (ASG): Bridging the gap between genome and transcriptome
-
Leipzig, J., Pevzner, P., and Heber, S. 2004. The Alternative Splicing Gallery (ASG): Bridging the gap between genome and transcriptome. Nucleic Acids Res. 32: 3977-3983.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 3977-3983
-
-
Leipzig, J.1
Pevzner, P.2
Heber, S.3
-
62
-
-
19344366251
-
Mechanistic links between nonsense-mediated mRNA decay and pre-mRNA splicing in mammalian cells
-
Lejeune, F. and Maquat, L.E. 2005. Mechanistic links between nonsense-mediated mRNA decay and pre-mRNA splicing in mammalian cells. Curr. Opin. Cell Biol. 17: 309-315.
-
(2005)
Curr. Opin. Cell Biol
, vol.17
, pp. 309-315
-
-
Lejeune, F.1
Maquat, L.E.2
-
63
-
-
34247388679
-
RNA-editing-mediated exon evolution
-
doi: 10.1186/gb-2007-8-2-r29
-
Lev-Maor, G., Sorek, R., Levanon, E.Y., Paz, N., Eisenberg, E., and Ast, G. 2007. RNA-editing-mediated exon evolution. Genome Biol. 8: R29. doi: 10.1186/gb-2007-8-2-r29.
-
(2007)
Genome Biol
, vol.8
-
-
Lev-Maor, G.1
Sorek, R.2
Levanon, E.Y.3
Paz, N.4
Eisenberg, E.5
Ast, G.6
-
64
-
-
0037422575
-
Evidence for the widespread coupling of alternative splicing and nonsense-mediated mRNA decay in humans
-
Lewis, B.P., Green, R.E., and Brenner, S.E. 2003. Evidence for the widespread coupling of alternative splicing and nonsense-mediated mRNA decay in humans. Proc. Natl. Acad. Sci. 100: 189-192.
-
(2003)
Proc. Natl. Acad. Sci
, vol.100
, pp. 189-192
-
-
Lewis, B.P.1
Green, R.E.2
Brenner, S.E.3
-
65
-
-
0035949674
-
A computational analysis of sequence features involved in recognition of short introns
-
Lim, L.P. and Burge, C.B. 2001. A computational analysis of sequence features involved in recognition of short introns. Proc. Natl. Acad. Sci. 98: 11193-11198.
-
(2001)
Proc. Natl. Acad. Sci
, vol.98
, pp. 11193-11198
-
-
Lim, L.P.1
Burge, C.B.2
-
66
-
-
0032128255
-
Identification of functional exonic splicing enhancer motifs recognized by individual SR proteins
-
Liu, H.X., Zhang, M., and Krainer, A.R. 1998. Identification of functional exonic splicing enhancer motifs recognized by individual SR proteins. Genes & Dev. 12: 1998-2012.
-
(1998)
Genes & Dev
, vol.12
, pp. 1998-2012
-
-
Liu, H.X.1
Zhang, M.2
Krainer, A.R.3
-
67
-
-
0034177911
-
Pre-mRNA splicing in higher plants
-
Lorkovic, Z.J., Wieczorek Kirk, D.A., Lambermon, M.H., and Filipowicz, W. 2000. Pre-mRNA splicing in higher plants. Trends Plant Sci. 5: 160-167.
-
(2000)
Trends Plant Sci
, vol.5
, pp. 160-167
-
-
Lorkovic, Z.J.1
Wieczorek Kirk, D.A.2
Lambermon, M.H.3
Filipowicz, W.4
-
68
-
-
0742323558
-
Nonsense-mediated mRNA decay: Splicing, translation and mRNP dynamics
-
Maquat, L.E. 2004. Nonsense-mediated mRNA decay: Splicing, translation and mRNP dynamics. Nat. Rev. Mol. Cell Biol. 5: 89-99.
-
(2004)
Nat. Rev. Mol. Cell Biol
, vol.5
, pp. 89-99
-
-
Maquat, L.E.1
-
69
-
-
0031154028
-
Retrotransposon insertion into the maize waxy gene results in tissue-specific RNA processing
-
Marillonnet, S. and Wessler, S.R. 1997. Retrotransposon insertion into the maize waxy gene results in tissue-specific RNA processing. Plant Cell 9: 967-978.
-
(1997)
Plant Cell
, vol.9
, pp. 967-978
-
-
Marillonnet, S.1
Wessler, S.R.2
-
70
-
-
0031040471
-
Expression and RNA splicing of the maize glutathione S-transferase Bronze2 gene is regulated by cadmium and other stresses
-
Marrs, K.A. and Walbot, V. 1997. Expression and RNA splicing of the maize glutathione S-transferase Bronze2 gene is regulated by cadmium and other stresses. Plant Physiol. 113: 93-102.
-
(1997)
Plant Physiol
, vol.113
, pp. 93-102
-
-
Marrs, K.A.1
Walbot, V.2
-
71
-
-
18344364099
-
Understanding alternative splicing: Towards a cellular code
-
Matlin, A.J., Clark, F., and Smith, C.W. 2005. Understanding alternative splicing: Towards a cellular code. Nat. Rev. Mol. Cell Biol. 6: 386-398.
-
(2005)
Nat. Rev. Mol. Cell Biol
, vol.6
, pp. 386-398
-
-
Matlin, A.J.1
Clark, F.2
Smith, C.W.3
-
72
-
-
45549108577
-
Cross-kingdom patterns of alternative splicing and splice recognition
-
doi: 10.1186/gb-2008-9-3-r50
-
McGuire, A.M., Pearson, M.D., Neafsey, D.E., and Galagan, J.E. 2008. Cross-kingdom patterns of alternative splicing and splice recognition. Genome Biol. 9: R50. doi: 10.1186/gb-2008-9-3-r50.
-
(2008)
Genome Biol
, vol.9
-
-
McGuire, A.M.1
Pearson, M.D.2
Neafsey, D.E.3
Galagan, J.E.4
-
73
-
-
0033856880
-
Unproductively spliced ribosomal protein mRNAs are natural targets of mRNA surveillance in C. elegans
-
Mitrovich, Q.M. and Anderson, P. 2000. Unproductively spliced ribosomal protein mRNAs are natural targets of mRNA surveillance in C. elegans. Genes & Dev. 14: 2173-2184.
-
(2000)
Genes & Dev
, vol.14
, pp. 2173-2184
-
-
Mitrovich, Q.M.1
Anderson, P.2
-
74
-
-
0036337915
-
A genomic view of alternative splicing
-
Modrek, B. and Lee, C. 2002. A genomic view of alternative splicing. Nat. Genet. 30: 13-19.
-
(2002)
Nat. Genet
, vol.30
, pp. 13-19
-
-
Modrek, B.1
Lee, C.2
-
75
-
-
0038617729
-
Alternative splicing in the human, mouse and rat genomes is associated with an increased frequency of exon creation and/or loss
-
Modrek, B. and Lee, C.J. 2003. Alternative splicing in the human, mouse and rat genomes is associated with an increased frequency of exon creation and/or loss. Nat. Genet. 34: 177-180.
-
(2003)
Nat. Genet
, vol.34
, pp. 177-180
-
-
Modrek, B.1
Lee, C.J.2
-
76
-
-
14744269229
-
The evolutionary dynamics of plant duplicate genes
-
Moore, R.C. and Purugganan, M.D. 2005. The evolutionary dynamics of plant duplicate genes. Curr. Opin. Plant Biol. 8: 122-128.
-
(2005)
Curr. Opin. Plant Biol
, vol.8
, pp. 122-128
-
-
Moore, R.C.1
Purugganan, M.D.2
-
77
-
-
25144488228
-
Gene duplication and exon shuffling by helitron-like transposons generate intraspecies diversity in maize
-
Morgante, M., Brunner, S., Pea, G., Fengler, K., Zuccolo, A., and Rafalski, A. 2005. Gene duplication and exon shuffling by helitron-like transposons generate intraspecies diversity in maize. Nat. Genet. 37: 997-1002.
-
(2005)
Nat. Genet
, vol.37
, pp. 997-1002
-
-
Morgante, M.1
Brunner, S.2
Pea, G.3
Fengler, K.4
Zuccolo, A.5
Rafalski, A.6
-
78
-
-
0030931561
-
smg mutants affect the expression of alternatively spliced SR protein mRNAs in Caenorhabditis elegans
-
Morrison, M., Harris, K.S., and Roth, M.B. 1997. smg mutants affect the expression of alternatively spliced SR protein mRNAs in Caenorhabditis elegans. Proc. Natl. Acad. Sci. 94: 9782-9785.
-
(1997)
Proc. Natl. Acad. Sci
, vol.94
, pp. 9782-9785
-
-
Morrison, M.1
Harris, K.S.2
Roth, M.B.3
-
79
-
-
28844443988
-
Species-specific variation of alternative splicing and transcriptional initiation in six eukaryotes
-
Nagasaki, H., Arita, M., Nishizawa, T., Suwa, M., and Gotoh, O. 2005. Species-specific variation of alternative splicing and transcriptional initiation in six eukaryotes. Gene 364: 53-62.
-
(2005)
Gene
, vol.364
, pp. 53-62
-
-
Nagasaki, H.1
Arita, M.2
Nishizawa, T.3
Suwa, M.4
Gotoh, O.5
-
80
-
-
33750084381
-
Whole-genome microarray in Arabidopsis facilitates global analysis of retained introns
-
Ner-Gaon, H. and Fluhr, R. 2006. Whole-genome microarray in Arabidopsis facilitates global analysis of retained introns. DNA Res. 13: 111-121.
-
(2006)
DNA Res
, vol.13
, pp. 111-121
-
-
Ner-Gaon, H.1
Fluhr, R.2
-
81
-
-
4944241489
-
Intron retention is a major phenomenon in alternative splicing in Arabidopsis
-
Ner-Gaon, H., Halachmi, R., Savaldi-Goldstein, S., Rubin, E., Ophir, R., and Fluhr, R. 2004. Intron retention is a major phenomenon in alternative splicing in Arabidopsis. Plant J. 39: 877-885.
-
(2004)
Plant J
, vol.39
, pp. 877-885
-
-
Ner-Gaon, H.1
Halachmi, R.2
Savaldi-Goldstein, S.3
Rubin, E.4
Ophir, R.5
Fluhr, R.6
-
82
-
-
34447123260
-
Comparative cross-species alternative splicing in plants
-
Ner-Gaon, H., Leviatan, N., Rubin, E., and Fluhr, R. 2007. Comparative cross-species alternative splicing in plants. Plant Physiol. 144: 1632-1641.
-
(2007)
Plant Physiol
, vol.144
, pp. 1632-1641
-
-
Ner-Gaon, H.1
Leviatan, N.2
Rubin, E.3
Fluhr, R.4
-
83
-
-
33947305594
-
Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay
-
Ni, J.Z., Grate, L., Donohue, J.P., Preston, C., Nobida, N., O'Brien, G., Shiue, L., Clark, T.A., Blume, J.E., and Ares Jr., M. 2007. Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay. Genes & Dev. 21: 708-718.
-
(2007)
Genes & Dev
, vol.21
, pp. 708-718
-
-
Ni, J.Z.1
Grate, L.2
Donohue, J.P.3
Preston, C.4
Nobida, N.5
O'Brien, G.6
Shiue, L.7
Clark, T.A.8
Blume, J.E.9
Ares Jr., M.10
-
84
-
-
27244432046
-
Seeing double: Gene duplication and diversification in plant secondary metabolism
-
Ober, D. 2005. Seeing double: Gene duplication and diversification in plant secondary metabolism. Trends Plant Sci. 10: 444-449.
-
(2005)
Trends Plant Sci
, vol.10
, pp. 444-449
-
-
Ober, D.1
-
85
-
-
33847343883
-
Alternative splicing of pre-mRNAs of Arabidopsis serine/arginine-rich proteins: Regulation by hormones and stresses
-
Palusa, S.G., Ali, G.S., and Reddy, A.S. 2007. Alternative splicing of pre-mRNAs of Arabidopsis serine/arginine-rich proteins: Regulation by hormones and stresses. Plant J. 49: 1091-1107.
-
(2007)
Plant J
, vol.49
, pp. 1091-1107
-
-
Palusa, S.G.1
Ali, G.S.2
Reddy, A.S.3
-
86
-
-
19944365069
-
Revealing global regulatory features of mammalian alternative splicing using a quantitative microarray platform
-
Pan, Q., Shai, O., Misquitta, C., Zhang, W., Saltzman, A.L., Mohammad, N., Babak, T., Siu, H., Hughes, T.R., Morris, Q.D., et al. 2004. Revealing global regulatory features of mammalian alternative splicing using a quantitative microarray platform. Mol. Cell 16: 929-941.
-
(2004)
Mol. Cell
, vol.16
, pp. 929-941
-
-
Pan, Q.1
Shai, O.2
Misquitta, C.3
Zhang, W.4
Saltzman, A.L.5
Mohammad, N.6
Babak, T.7
Siu, H.8
Hughes, T.R.9
Morris, Q.D.10
-
87
-
-
16344386197
-
Polyploidy, evolutionary opportunity, and crop adaptation
-
Paterson, A.H. 2005. Polyploidy, evolutionary opportunity, and crop adaptation. Genetica 123: 191-196.
-
(2005)
Genetica
, vol.123
, pp. 191-196
-
-
Paterson, A.H.1
-
88
-
-
34249987613
-
A computational survey of candidate exonic splicing enhancer motifs in the model plant Arabidopsis thaliana
-
doi: 10.1186/1471-2105-8-159
-
Pertea, M., Mount, S.M., and Salzberg, S.L. 2007. A computational survey of candidate exonic splicing enhancer motifs in the model plant Arabidopsis thaliana. BMC Bioinformatics 8: 159. doi: 10.1186/1471-2105-8-159.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 159
-
-
Pertea, M.1
Mount, S.M.2
Salzberg, S.L.3
-
89
-
-
0038037805
-
Autoregulation of FCA pre-mRNA processing controls Arabidopsis flowering time
-
Quesada, V., Macknight, R., Dean, C., and Simpson, G.G. 2003. Autoregulation of FCA pre-mRNA processing controls Arabidopsis flowering time. EMBO J. 22: 3142-3152.
-
(2003)
EMBO J
, vol.22
, pp. 3142-3152
-
-
Quesada, V.1
Macknight, R.2
Dean, C.3
Simpson, G.G.4
-
90
-
-
31144437057
-
The RNA-binding protein FCA is an abscisic acid receptor
-
Razem, F.A., El-Kereamy, A., Abrams, S.R., and Hill, R.D. 2006. The RNA-binding protein FCA is an abscisic acid receptor. Nature 439: 290-294.
-
(2006)
Nature
, vol.439
, pp. 290-294
-
-
Razem, F.A.1
El-Kereamy, A.2
Abrams, S.R.3
Hill, R.D.4
-
91
-
-
0035212996
-
Nuclear pre-mRNA splicing in plants
-
Reddy, A.S.N. 2001. Nuclear pre-mRNA splicing in plants. Crit. Rev. Plant Sci. 20: 523-571.
-
(2001)
Crit. Rev. Plant Sci
, vol.20
, pp. 523-571
-
-
Reddy, A.S.N.1
-
92
-
-
34250813107
-
Alternative splicing of pre-messenger RNAs in plants in the genomic era
-
Reddy, A.S. 2007. Alternative splicing of pre-messenger RNAs in plants in the genomic era. Annu. Rev. Plant Biol. 58: 267-294.
-
(2007)
Annu. Rev. Plant Biol
, vol.58
, pp. 267-294
-
-
Reddy, A.S.1
-
93
-
-
37849032457
-
The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants
-
Rensing, S.A., Lang, D., Zimmer, A.D., Terry, A., Salamov, A., Shapiro, H., Nishiyama, T., Perroud, P.F., Lindquist, E.A., Kamisugi, Y., et al. 2008. The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants. Science 319: 64-69.
-
(2008)
Science
, vol.319
, pp. 64-69
-
-
Rensing, S.A.1
Lang, D.2
Zimmer, A.D.3
Terry, A.4
Salamov, A.5
Shapiro, H.6
Nishiyama, T.7
Perroud, P.F.8
Lindquist, E.A.9
Kamisugi, Y.10
-
94
-
-
0033781387
-
Evidence for splice site pairing via intron definition in Schizosaccharomyces pombe
-
Romfo, C.M., Alvarez, C.J., van Heeckeren, W.J., Webb, C.J., and Wise, J.A. 2000. Evidence for splice site pairing via intron definition in Schizosaccharomyces pombe. Mol. Cell. Biol. 20: 7955-7970.
-
(2000)
Mol. Cell. Biol
, vol.20
, pp. 7955-7970
-
-
Romfo, C.M.1
Alvarez, C.J.2
van Heeckeren, W.J.3
Webb, C.J.4
Wise, J.A.5
-
95
-
-
0019961126
-
Calcitonin mRNA polymorphism: Peptide switching associated with alternative RNA splicing events
-
Rosenfeld, M.G., Lin, C.R., Amara, S.G., Stolarsky, L., Roos, B.A., Ong, E.S., and Evans, R.M. 1982. Calcitonin mRNA polymorphism: Peptide switching associated with alternative RNA splicing events. Proc. Natl. Acad. Sci. 79: 1717-1721.
-
(1982)
Proc. Natl. Acad. Sci
, vol.79
, pp. 1717-1721
-
-
Rosenfeld, M.G.1
Lin, C.R.2
Amara, S.G.3
Stolarsky, L.4
Roos, B.A.5
Ong, E.S.6
Evans, R.M.7
-
96
-
-
35248860123
-
Two paralogous genes encoding small subunits of ADP-glucose pyrophosphorylase in maize, bt2 and L2, replace the single alternatively spliced gene found in other cereal species
-
Rosti, S. and Denyer, K. 2007. Two paralogous genes encoding small subunits of ADP-glucose pyrophosphorylase in maize, bt2 and L2, replace the single alternatively spliced gene found in other cereal species. J. Mol. Evol. 65: 316-327.
-
(2007)
J. Mol. Evol
, vol.65
, pp. 316-327
-
-
Rosti, S.1
Denyer, K.2
-
97
-
-
33947653234
-
Sequence features responsible for intron retention in human
-
doi: 10.1186/1471-2164-8-59
-
Sakabe, N.J. and de Souza, S.J. 2007. Sequence features responsible for intron retention in human. BMC Genomics 8: 59. doi: 10.1186/1471-2164-8-59.
-
(2007)
BMC Genomics
, vol.8
, pp. 59
-
-
Sakabe, N.J.1
de Souza, S.J.2
-
98
-
-
33748928278
-
Huge proteins in the human proteome and their participation in hereditary diseases
-
Sakharkar, M.K., Kangueane, P., Sakharkar, K.R., and Zhong, Z. 2006. Huge proteins in the human proteome and their participation in hereditary diseases. In Silico Biol. 6: 275-279.
-
(2006)
In Silico Biol
, vol.6
, pp. 275-279
-
-
Sakharkar, M.K.1
Kangueane, P.2
Sakharkar, K.R.3
Zhong, Z.4
-
99
-
-
0030773749
-
A nonparametric approach to estimating divergence times in the absence of rate constancy
-
Sanderson, M. 1997. A nonparametric approach to estimating divergence times in the absence of rate constancy. Mol. Biol. Evol. 14: 1218-1231.
-
(1997)
Mol. Biol. Evol
, vol.14
, pp. 1218-1231
-
-
Sanderson, M.1
-
100
-
-
0033019048
-
Selection and characterization of pre-mRNA splicing enhancers: Identification of novel SR protein-specific enhancer sequences
-
Schaal, T.D. and Maniatis, T. 1999. Selection and characterization of pre-mRNA splicing enhancers: Identification of novel SR protein-specific enhancer sequences. Mol. Cell. Biol. 19: 1705-1719.
-
(1999)
Mol. Cell. Biol
, vol.19
, pp. 1705-1719
-
-
Schaal, T.D.1
Maniatis, T.2
-
101
-
-
12344302543
-
A comprehensive transcript index of the human genome generated using microarrays and computational approaches
-
doi: 10.1186/gb-2004-5-10-r73
-
Schadt, E.E., Edwards, S.W., Guhathakurta, D., Holder, D., Ying, L., Svetnik, V., Leonardson, A., Hart, K.W., Russell, A., Li, G., et al. 2004. A comprehensive transcript index of the human genome generated using microarrays and computational approaches. Genome Biol. 5: R73. doi: 10.1186/gb-2004-5-10-r73.
-
(2004)
Genome Biol
, vol.5
-
-
Schadt, E.E.1
Edwards, S.W.2
Guhathakurta, D.3
Holder, D.4
Ying, L.5
Svetnik, V.6
Leonardson, A.7
Hart, K.W.8
Russell, A.9
Li, G.10
-
102
-
-
0347269087
-
MIPS Arabidopsis thaliana Database (MAtDB): An integrated biological knowledge resource for plant genomics
-
Schoof, H., Ernst, R., Nazarov, V., Pfeifer, L., Mewes, H.W., and Mayer, K.F. 2004. MIPS Arabidopsis thaliana Database (MAtDB): An integrated biological knowledge resource for plant genomics. Nucleic Acids Res. 32: D373-D376.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Schoof, H.1
Ernst, R.2
Nazarov, V.3
Pfeifer, L.4
Mewes, H.W.5
Mayer, K.F.6
-
103
-
-
34748869000
-
Comparative analysis of transposed element insertion within human and mouse genomes reveals Alu's unique role in shaping the human transcriptome
-
doi: 10.1186/gb-2007-8-6- r127
-
Sela, N., Mersch, B., Gal-Mark, N., Lev-Maor, G., Hotz-Wagenblatt, A., and Ast, G. 2007. Comparative analysis of transposed element insertion within human and mouse genomes reveals Alu's unique role in shaping the human transcriptome. Genome Biol. 8: R127. doi: 10.1186/gb-2007-8-6- r127.
-
(2007)
Genome Biol
, vol.8
-
-
Sela, N.1
Mersch, B.2
Gal-Mark, N.3
Lev-Maor, G.4
Hotz-Wagenblatt, A.5
Ast, G.6
-
104
-
-
0028307171
-
Split genes and RNA splicing
-
Sharp, P.A. 1994. Split genes and RNA splicing. Cell 77: 805-815.
-
(1994)
Cell
, vol.77
, pp. 805-815
-
-
Sharp, P.A.1
-
105
-
-
33745609509
-
RS domains contact splicing signals and promote splicing by a common mechanism in yeast through humans
-
Shen, H. and Green, M.R. 2006. RS domains contact splicing signals and promote splicing by a common mechanism in yeast through humans. Genes & Dev. 20: 1755-1765.
-
(2006)
Genes & Dev
, vol.20
, pp. 1755-1765
-
-
Shen, H.1
Green, M.R.2
-
106
-
-
18644363025
-
A novel Mtd splice isoform is responsible for trophoblast cell death in pre-eclampsia
-
Soleymanlou, N., Wu, Y., Wang, J.X., Todros, T., Ietta, F., Jurisicova, A., Post, M., and Caniggia, I. 2005. A novel Mtd splice isoform is responsible for trophoblast cell death in pre-eclampsia. Cell Death Differ. 12: 441-452.
-
(2005)
Cell Death Differ
, vol.12
, pp. 441-452
-
-
Soleymanlou, N.1
Wu, Y.2
Wang, J.X.3
Todros, T.4
Ietta, F.5
Jurisicova, A.6
Post, M.7
Caniggia, I.8
-
107
-
-
0038486897
-
Intronic sequences flanking alternatively spliced exons are conserved between human and mouse
-
Sorek, R. and Ast, G. 2003. Intronic sequences flanking alternatively spliced exons are conserved between human and mouse. Genome Res. 13: 1631-1637.
-
(2003)
Genome Res
, vol.13
, pp. 1631-1637
-
-
Sorek, R.1
Ast, G.2
-
108
-
-
1642473041
-
How prevalent is functional alternative splicing in the human genome?
-
Sorek, R., Shamir, R., and Ast, G. 2004. How prevalent is functional alternative splicing in the human genome? Trends Genet. 20: 68-71.
-
(2004)
Trends Genet
, vol.20
, pp. 68-71
-
-
Sorek, R.1
Shamir, R.2
Ast, G.3
-
109
-
-
33645763522
-
A potential role of alternative splicing in the regulation of the transcriptional activity of human GLI2 in gonadal tissues
-
doi: 10.1186/1471-2199-7-13
-
Speek, M., Njunkova, O., Pata, I., Valdre, E., and Kogerman, P. 2006. A potential role of alternative splicing in the regulation of the transcriptional activity of human GLI2 in gonadal tissues. BMC Mol. Biol. 7: 13. doi: 10.1186/1471-2199-7-13.
-
(2006)
BMC Mol. Biol
, vol.7
, pp. 13
-
-
Speek, M.1
Njunkova, O.2
Pata, I.3
Valdre, E.4
Kogerman, P.5
-
110
-
-
0032489021
-
Mechanical devices of the spliceosome: Motors, clocks, springs, and things
-
Staley, J.P. and Guthrie, C. 1998. Mechanical devices of the spliceosome: Motors, clocks, springs, and things. Cell 92: 315-326.
-
(1998)
Cell
, vol.92
, pp. 315-326
-
-
Staley, J.P.1
Guthrie, C.2
-
111
-
-
12344250822
-
Function of alternative splicing
-
Stamm, S., Ben-Ari, S., Rafalska, I., Tang, Y., Zhang, Z., Toiber, D., Thanaraj, T.A., and Soreq, H. 2005. Function of alternative splicing. Gene 344: 1-20.
-
(2005)
Gene
, vol.344
, pp. 1-20
-
-
Stamm, S.1
Ben-Ari, S.2
Rafalska, I.3
Tang, Y.4
Zhang, Z.5
Toiber, D.6
Thanaraj, T.A.7
Soreq, H.8
-
112
-
-
33747830848
-
AUGUSTUS: Ab initio prediction of alternative transcripts
-
Stanke, M., Keller, O., Gunduz, I., Hayes, A., Waack, S., and Morgenstern, B. 2006a. AUGUSTUS: Ab initio prediction of alternative transcripts. Nucleic Acids Res. 34: W435-W439.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Stanke, M.1
Keller, O.2
Gunduz, I.3
Hayes, A.4
Waack, S.5
Morgenstern, B.6
-
113
-
-
33645161645
-
Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources
-
doi: 10.1186/1471-2105-7-62
-
Stanke, M., Schoffmann, O., Morgenstern, B., and Waack, S. 2006b. Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources. BMC Bioinformatics 7: 62. doi: 10.1186/1471-2105-7-62.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 62
-
-
Stanke, M.1
Schoffmann, O.2
Morgenstern, B.3
Waack, S.4
-
114
-
-
32044443159
-
Evolution of alternative splicing after gene duplication
-
Su, Z., Wang, J., Yu, J., Huang, X., and Gu, X. 2006. Evolution of alternative splicing after gene duplication. Genome Res. 16: 182-189.
-
(2006)
Genome Res
, vol.16
, pp. 182-189
-
-
Su, Z.1
Wang, J.2
Yu, J.3
Huang, X.4
Gu, X.5
-
115
-
-
33645760966
-
Unusual intron conservation near tissue-regulated exons found by splicing microarrays
-
doi: 10.1371/journal.pcbi. 0020004
-
Sugnet, C.W., Srinivasan, K., Clark, T.A., O'Brien, G., Cline, M.S., Wang, H., Williams, A., Kulp, D., Blume, J.E., Haussler, D., et al. 2006. Unusual intron conservation near tissue-regulated exons found by splicing microarrays. PLoS Comput. Biol. 2: e4. doi: 10.1371/journal.pcbi. 0020004.
-
(2006)
PLoS Comput. Biol
, vol.2
-
-
Sugnet, C.W.1
Srinivasan, K.2
Clark, T.A.3
O'Brien, G.4
Cline, M.S.5
Wang, H.6
Williams, A.7
Kulp, D.8
Blume, J.E.9
Haussler, D.10
-
116
-
-
33845948995
-
An exonic splicing silencer is involved in the regulated splicing of glucose 6-phosphate dehydrogenase mRNA
-
Szeszel-Fedorowicz, W., Talukdar, I., Griffith, B.N., Walsh, C.M., and Salati, L.M. 2006. An exonic splicing silencer is involved in the regulated splicing of glucose 6-phosphate dehydrogenase mRNA. J. Biol. Chem. 281: 34146-34158.
-
(2006)
J. Biol. Chem
, vol.281
, pp. 34146-34158
-
-
Szeszel-Fedorowicz, W.1
Talukdar, I.2
Griffith, B.N.3
Walsh, C.M.4
Salati, L.M.5
-
117
-
-
0028288693
-
Intron definition in splicing of small Drosophila introns
-
Talerico, M. and Berget, S.M. 1994. Intron definition in splicing of small Drosophila introns. Mol. Cell. Biol. 14: 3434-3445.
-
(1994)
Mol. Cell. Biol
, vol.14
, pp. 3434-3445
-
-
Talerico, M.1
Berget, S.M.2
-
118
-
-
28344442591
-
Differential expression of splice variant and wild-type parkin in sporadic Parkinson's disease
-
Tan, E.K., Shen, H., Tan, J.M., Lim, K.L., Fook-Chong, S., Hu, W.P., Paterson, M.C., Chandran, V.R., Yew, K., Tan, C., et al. 2005. Differential expression of splice variant and wild-type parkin in sporadic Parkinson's disease. Neurogenetics 6: 179-184.
-
(2005)
Neurogenetics
, vol.6
, pp. 179-184
-
-
Tan, E.K.1
Shen, H.2
Tan, J.M.3
Lim, K.L.4
Fook-Chong, S.5
Hu, W.P.6
Paterson, M.C.7
Chandran, V.R.8
Yew, K.9
Tan, C.10
-
119
-
-
34547672823
-
Differential expression of alternatively spliced mRNAs of Arabidopsis SR protein homologs, atSR30 and atSR45a, in response to environmental stress
-
Tanabe, N., Yoshimura, K., Kimura, A., Yabuta, Y., and Shigeoka, S. 2007. Differential expression of alternatively spliced mRNAs of Arabidopsis SR protein homologs, atSR30 and atSR45a, in response to environmental stress. Plant Cell Physiol. 48: 1036-1049.
-
(2007)
Plant Cell Physiol
, vol.48
, pp. 1036-1049
-
-
Tanabe, N.1
Yoshimura, K.2
Kimura, A.3
Yabuta, Y.4
Shigeoka, S.5
-
120
-
-
23044431574
-
Nova regulates brain-specific splicing to shape the synapse
-
Ule, J., Ule, A., Spencer, J., Williams, A., Hu, J.S., Cline, M., Wang, H., Clark, T., Fraser, C., Ruggiu, M., et al. 2005. Nova regulates brain-specific splicing to shape the synapse. Nat. Genet. 37: 844-852.
-
(2005)
Nat. Genet
, vol.37
, pp. 844-852
-
-
Ule, J.1
Ule, A.2
Spencer, J.3
Williams, A.4
Hu, J.S.5
Cline, M.6
Wang, H.7
Clark, T.8
Fraser, C.9
Ruggiu, M.10
-
121
-
-
33749056769
-
An RNA map predicting Nova-dependent splicing regulation
-
Ule, J., Stefani, G., Mele, A., Ruggiu, M., Wang, X., Taneri, B., Gaasterland, T., Blencowe, B.J., and Darnell, R.B. 2006. An RNA map predicting Nova-dependent splicing regulation. Nature 444: 580-586.
-
(2006)
Nature
, vol.444
, pp. 580-586
-
-
Ule, J.1
Stefani, G.2
Mele, A.3
Ruggiu, M.4
Wang, X.5
Taneri, B.6
Gaasterland, T.7
Blencowe, B.J.8
Darnell, R.B.9
-
122
-
-
33645833000
-
Unbalanced alternative splicing and its significance in cancer
-
Venables, J.P. 2006. Unbalanced alternative splicing and its significance in cancer. Bioessays 28: 378-386.
-
(2006)
Bioessays
, vol.28
, pp. 378-386
-
-
Venables, J.P.1
-
123
-
-
0035895505
-
The sequence of the human genome
-
Venter, J.C.M.D., Adams, E.W., Myers, P.W., Li, R.J., Mural, G.G., Sutton, H.O., Smith, M., Yandell, C.A., Evans, R.A., Holt, J.D., et al. 2001. The sequence of the human genome. Science 291: 1304-1351.
-
(2001)
Science
, vol.291
, pp. 1304-1351
-
-
Venter, J.C.M.D.1
Adams, E.W.2
Myers, P.W.3
Li, R.J.4
Mural, G.G.5
Sutton, H.O.6
Smith, M.7
Yandell, C.A.8
Evans, R.A.9
Holt, J.D.10
-
124
-
-
18044371378
-
-
Wang, B.B. and Brendel, V. 2004. The ASRG database: Identification and survey of Arabidopsis thaliana genes involved in pre-mRNA splicing. Genome Biol. 5: R102. doi: 10.1186/gb-2004-5-12-r102.
-
Wang, B.B. and Brendel, V. 2004. The ASRG database: Identification and survey of Arabidopsis thaliana genes involved in pre-mRNA splicing. Genome Biol. 5: R102. doi: 10.1186/gb-2004-5-12-r102.
-
-
-
-
125
-
-
33646484347
-
Genomewide comparative analysis of alternative splicing in plants
-
Wang, B.B. and Brendel, V. 2006a. Genomewide comparative analysis of alternative splicing in plants. Proc. Natl. Acad. Sci. 103: 7175-7180.
-
(2006)
Proc. Natl. Acad. Sci
, vol.103
, pp. 7175-7180
-
-
Wang, B.B.1
Brendel, V.2
-
126
-
-
33646828551
-
Molecular characterization and phylogeny of U2AF35 homologs in plants
-
Wang, B.B. and Brendel, V. 2006b. Molecular characterization and phylogeny of U2AF35 homologs in plants. Plant Physiol. 140: 624-636.
-
(2006)
Plant Physiol
, vol.140
, pp. 624-636
-
-
Wang, B.B.1
Brendel, V.2
-
127
-
-
10944256767
-
Systematic identification and analysis of exonic splicing silencers
-
Wang, Z., Rolish, M.E., Yeo, G., Tung, V., Mawson, M., and Burge, C.B. 2004. Systematic identification and analysis of exonic splicing silencers. Cell 119: 831-845.
-
(2004)
Cell
, vol.119
, pp. 831-845
-
-
Wang, Z.1
Rolish, M.E.2
Yeo, G.3
Tung, V.4
Mawson, M.5
Burge, C.B.6
-
128
-
-
41549147666
-
Cross-species EST alignments reveal novel and conserved alternative splicing events in legumes
-
Wang, B.B., O'Toole, M., Brendel, V., and Young, N.D. 2008. Cross-species EST alignments reveal novel and conserved alternative splicing events in legumes. BMC Plant Biol. 8: 17.
-
(2008)
BMC Plant Biol
, vol.8
, pp. 17
-
-
Wang, B.B.1
O'Toole, M.2
Brendel, V.3
Young, N.D.4
-
129
-
-
21044451858
-
Libraries enriched for alternatively spliced exons reveal splicing patterns in melanocytes and melanomas
-
Watahiki, A., Waki, K., Hayatsu, N., Shiraki, T., Kondo, S., Nakamura, M., Sasaki, D., Arakawa, T., Kawai, J., Harbers, M., et al. 2004. Libraries enriched for alternatively spliced exons reveal splicing patterns in melanocytes and melanomas. Nat. Methods 1: 233-239.
-
(2004)
Nat. Methods
, vol.1
, pp. 233-239
-
-
Watahiki, A.1
Waki, K.2
Hayatsu, N.3
Shiraki, T.4
Kondo, S.5
Nakamura, M.6
Sasaki, D.7
Arakawa, T.8
Kawai, J.9
Harbers, M.10
-
130
-
-
0030250111
-
The roles of heterogeneous nuclear ribonucleoproteins (hnRNP) in RNA metabolism
-
Weighardt, F., Biamonti, G., and Riva, S. 1996. The roles of heterogeneous nuclear ribonucleoproteins (hnRNP) in RNA metabolism. BioEssays 18: 747-756.
-
(1996)
BioEssays
, vol.18
, pp. 747-756
-
-
Weighardt, F.1
Biamonti, G.2
Riva, S.3
-
131
-
-
0024707622
-
Alternative mRNA splicing generates the two ribulosebisphosphate carboxylase/oxygenase activase polypeptides in spinach and Arabidopsis
-
Werneke, J.M., Chatfield, J.M., and Ogren, W.L. 1989. Alternative mRNA splicing generates the two ribulosebisphosphate carboxylase/oxygenase activase polypeptides in spinach and Arabidopsis. Plant Cell 1: 815-825.
-
(1989)
Plant Cell
, vol.1
, pp. 815-825
-
-
Werneke, J.M.1
Chatfield, J.M.2
Ogren, W.L.3
-
132
-
-
0024712231
-
Date of the monocot-dicot divergence estimated from chloroplast DNA sequence data
-
Wolfe, K.H., Gouy, M., Yang, Y.W., Sharp, P.M., and Li, W.H. 1989. Date of the monocot-dicot divergence estimated from chloroplast DNA sequence data. Proc. Natl. Acad. Sci. 86: 6201-6205.
-
(1989)
Proc. Natl. Acad. Sci
, vol.86
, pp. 6201-6205
-
-
Wolfe, K.H.1
Gouy, M.2
Yang, Y.W.3
Sharp, P.M.4
Li, W.H.5
-
133
-
-
0027137934
-
Specific interactions between proteins implicated in splice site selection and regulated alternative splicing
-
Wu, J.Y. and Maniatis, T. 1993. Specific interactions between proteins implicated in splice site selection and regulated alternative splicing. Cell 75: 1061-1070.
-
(1993)
Cell
, vol.75
, pp. 1061-1070
-
-
Wu, J.Y.1
Maniatis, T.2
-
134
-
-
33644840915
-
Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome 2 reveals numerous transcript variants
-
Xiao, Y.L., Smith, S.R., Ishmael, N., Redman, J.C., Kumar, N., Monaghan, E.L., Ayele, M., Haas, B.J., Wu, H.C., and Town, C.D. 2005. Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome 2 reveals numerous transcript variants. Plant Physiol. 139: 1323-1337.
-
(2005)
Plant Physiol
, vol.139
, pp. 1323-1337
-
-
Xiao, Y.L.1
Smith, S.R.2
Ishmael, N.3
Redman, J.C.4
Kumar, N.5
Monaghan, E.L.6
Ayele, M.7
Haas, B.J.8
Wu, H.C.9
Town, C.D.10
-
135
-
-
33745394130
-
Alternative splicing and RNA selection pressure - evolutionary consequences for eukaryotic genomes
-
Xing, Y. and Lee, C. 2006. Alternative splicing and RNA selection pressure - evolutionary consequences for eukaryotic genomes. Nat. Rev. Genet. 7: 499-509.
-
(2006)
Nat. Rev. Genet
, vol.7
, pp. 499-509
-
-
Xing, Y.1
Lee, C.2
-
136
-
-
34848925793
-
Mapping the genome landscape using tiling array technology
-
Yazaki, J., Gregory, B.D., and Ecker, J.R. 2007. Mapping the genome landscape using tiling array technology. Curr. Opin. Plant Biol. 10: 534-542.
-
(2007)
Curr. Opin. Plant Biol
, vol.10
, pp. 534-542
-
-
Yazaki, J.1
Gregory, B.D.2
Ecker, J.R.3
-
137
-
-
14544277546
-
Identification and analysis of alternative splicing events conserved in human and mouse
-
Yeo, G.W., Van Nostrand, E., Holste, D., Poggio, T., and Burge, C.B. 2005. Identification and analysis of alternative splicing events conserved in human and mouse. Proc. Natl. Acad. Sci. 102: 2850-2855.
-
(2005)
Proc. Natl. Acad. Sci
, vol.102
, pp. 2850-2855
-
-
Yeo, G.W.1
Van Nostrand, E.2
Holste, D.3
Poggio, T.4
Burge, C.B.5
-
138
-
-
34547556327
-
Novel exon combinations generated by alternative splicing of gene fragments mobilized by a CACTA transposon in Glycine max
-
doi: 10.1186/1471-2229-7-38
-
Zabala, G. and Vodkin, L. 2007. Novel exon combinations generated by alternative splicing of gene fragments mobilized by a CACTA transposon in Glycine max. BMC Plant Biol. 7: 38. doi: 10.1186/1471-2229-7-38.
-
(2007)
BMC Plant Biol
, vol.7
, pp. 38
-
-
Zabala, G.1
Vodkin, L.2
-
139
-
-
37249057805
-
Alternative splicing and mRNA levels of the disease resistance gene RPS4 are induced during defense responses
-
Zhang, X.C. and Gassmann, W. 2007. Alternative splicing and mRNA levels of the disease resistance gene RPS4 are induced during defense responses. Plant Physiol. 145: 1577-1587.
-
(2007)
Plant Physiol
, vol.145
, pp. 1577-1587
-
-
Zhang, X.C.1
Gassmann, W.2
-
140
-
-
0032564336
-
A pyrimidine-rich exonic splicing suppressor binds multiple RNA splicing factors and inhibits spliceosome assembly
-
Zheng, Z.M., Huynen, M., and Baker, C.C. 1998. A pyrimidine-rich exonic splicing suppressor binds multiple RNA splicing factors and inhibits spliceosome assembly. Proc. Natl. Acad. Sci. 95: 14088-14093.
-
(1998)
Proc. Natl. Acad. Sci
, vol.95
, pp. 14088-14093
-
-
Zheng, Z.M.1
Huynen, M.2
Baker, C.C.3
-
141
-
-
33646159973
-
A profile of alternative RNA splicing and transcript variation of CACNA1H, a human T-channel gene candidate for idiopathic generalized epilepsies
-
Zhong, X., Liu, J.R., Kyle, J.W., Hanck, D.A., and Agnew, W.S. 2006. A profile of alternative RNA splicing and transcript variation of CACNA1H, a human T-channel gene candidate for idiopathic generalized epilepsies. Hum. Mol. Genet. 15: 1497-1512.
-
(2006)
Hum. Mol. Genet
, vol.15
, pp. 1497-1512
-
-
Zhong, X.1
Liu, J.R.2
Kyle, J.W.3
Hanck, D.A.4
Agnew, W.S.5
-
142
-
-
0037068447
-
Comprehensive proteomic analysis of the human spliceosome
-
Zhou, Z., Licklider, L.J., Gygi, S.P., and Reed, R. 2002. Comprehensive proteomic analysis of the human spliceosome. Nature 419: 182-185.
-
(2002)
Nature
, vol.419
, pp. 182-185
-
-
Zhou, Z.1
Licklider, L.J.2
Gygi, S.P.3
Reed, R.4
-
143
-
-
0035691667
-
Exon identity established through differential antagonism between exonic splicing silencer-bound hnRNP A1 and enhancer-bound SR proteins
-
Zhu, J., Mayeda, A., and Krainer, A.R. 2001. Exon identity established through differential antagonism between exonic splicing silencer-bound hnRNP A1 and enhancer-bound SR proteins. Mol. Cell 8: 1351-1361.
-
(2001)
Mol. Cell
, vol.8
, pp. 1351-1361
-
-
Zhu, J.1
Mayeda, A.2
Krainer, A.R.3
-
144
-
-
0037783258
-
Refined annotation of the Arabidopsis genome by complete expressed sequence tag mapping
-
Zhu, W., Schlueter, S.D., and Brendel, V. 2003. Refined annotation of the Arabidopsis genome by complete expressed sequence tag mapping. Plant Physiol. 132: 469-484.
-
(2003)
Plant Physiol
, vol.132
, pp. 469-484
-
-
Zhu, W.1
Schlueter, S.D.2
Brendel, V.3
|