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Volumn 20, Issue 8, 2001, Pages 2051-2061

Visualizing the solvent-inaccessible core of a group II intron ribozyme

Author keywords

Catalysis; Hydroxyl radical footprinting; Molecular modeling; RNA folding; Structure

Indexed keywords

HYDROXYL GROUP; RIBOZYME;

EID: 0035901549     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1093/emboj/20.8.2051     Document Type: Article
Times cited : (66)

References (68)
  • 5
    • 0032404048 scopus 로고    scopus 로고
    • Defining functional groups, core structural features and inter-domain tertiary contacts essential for group II intron self-splicing: A NAIM analysis
    • (1998) EMBO J. , vol.17 , pp. 7091-7104
    • Boudvillain, M.1    Pyle, A.M.2
  • 9
    • 0024214064 scopus 로고
    • Conserved sequences and structure of group I introns: Building an active site for RNA catalysis - A review
    • (1988) Gene , vol.73 , pp. 259-271
    • Cech, T.R.1
  • 12
  • 14
    • 0034635167 scopus 로고    scopus 로고
    • Characterization of the Tetrahymena ribozyme folding pathway using the kinetic footprinting reagent peroxynitrous acid
    • (2000) Biochemistry , vol.39 , pp. 2-8
    • Chaulk, S.1    MacMillan, A.2
  • 15
    • 0029312926 scopus 로고
    • Branch-point attack in group II introns is a highly reversible transesterification, providing a possible proofreading mechanism for 5′-splice site selection
    • (1995) RNA , vol.1 , pp. 391-406
    • Chin, K.1    Pyle, A.M.2
  • 17
    • 0030959348 scopus 로고    scopus 로고
    • Rules for RNA recognition of GNRA tetraloops deduced by in vitro selection: Comparison with in vivo evolution
    • (1997) EMBO J. , vol.16 , pp. 3289-3302
    • Costa, M.1    Michel, F.2
  • 19
    • 0031555476 scopus 로고    scopus 로고
    • A group II self-splicing intron from the brown alga Pylaiella littoralis is active at unusually low magnesium concentrations and forms populations of molecules with a uniform conformation
    • (1997) J. Mol. Biol. , vol.274 , pp. 353-364
    • Costa, M.1    Fontaine, J.M.2    Goer, S.L.3    Michel, F.4
  • 32
    • 0025344901 scopus 로고
    • Base-pairing interactions involving the 5′- and 3′-terminal nucleotides of group II self-splicing introns
    • (1990) J. Mol. Biol. , vol.213 , pp. 437-447
    • Jacquier, A.1    Michel, F.2
  • 33
    • 0023003333 scopus 로고
    • Efficient trans-splicing of a yeast mitochondrial RNA group II intron implicates a strong 5′-exon-intron interaction
    • (1986) Science , vol.234 , pp. 1099-1104
    • Jacquier, A.1    Rosbash, M.2
  • 40
    • 0026486883 scopus 로고
    • A novel base-pairing interaction between U2 and U6 snRNAs suggests a mechanism for the catalytic activation of the spliceosome
    • (1992) Cell , vol.71 , pp. 803-817
    • Madhani, H.D.1    Guthrie, C.2
  • 43
    • 0028904152 scopus 로고
    • Conversion of a group II intron into a new multiple-turnover ribozyme that selectively cleaves oligonucleotides: Elucidation of reaction mechanism and structure/function relationships
    • (1995) Biochemistry , vol.34 , pp. 2965-2977
    • Michels, W.J.1    Pyle, A.M.2
  • 44
    • 0030801742 scopus 로고    scopus 로고
    • A new model for the three-dimensional folding of Escherichia coli 16S ribosomal RNA. I. Fitting the RNA to a 3D electron microscopic map at 20 Å
    • (1997) J. Mol. Biol. , vol.271 , pp. 524-544
    • Mueller, F.1    Brimacombe, R.2
  • 48
    • 0028945859 scopus 로고
    • Higher-order folding and domain analysis of the ribozyme from Bacillus subtilis ribonuclease P
    • (1995) Biochemistry , vol.34 , pp. 902-909
    • Pan, T.1
  • 56
    • 0028351893 scopus 로고
    • Building a kinetic framework for group II intron ribozyme activity: Quantitation of interdomain binding and reaction rate
    • (1994) Biochemistry , vol.33 , pp. 2716-2725
    • Pyle, A.M.1    Green, J.B.2
  • 57
    • 0030936233 scopus 로고    scopus 로고
    • Stopped-flow fluorescence spectrocopy reveals that domain I of a group II intron is an independent folding unit
    • (1997) Biochemistry , vol.36 , pp. 4718-4730
    • Qin, P.Z.F.1    Pyle, A.M.2
  • 64
  • 66
    • 0022551018 scopus 로고
    • Restrained refinement of the monoclinic form of yeast phenylalanine transfer RNA. Temperature factors and dynamics, coordinated waters and base-pair propeller twist angles
    • (1986) Biochemistry , vol.25 , pp. 4868-4878
    • Westhof, E.1    Sundaralingam, M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.