메뉴 건너뛰기




Volumn 50, Issue 24, 2007, Pages 5912-5925

Application of fragment-based lead generation to the discovery of novel, cyclic amidine β-secretase inhibitors with nanomolar potency, cellular activity, and high ligand efficiency

Author keywords

[No Author keywords available]

Indexed keywords

2 AMINO 6 [2 (3' METHOXYBIPHENYL 3 YL)ETHYL] 3,6 DIMETHYL 5,6 DIHYDRO 3H PYRIMIDIN 4 ONE; 4 PYRIMIDINONE DERIVATIVE; AMIDINE; BETA SECRETASE INHIBITOR; CYTOSINE; DIHYDROISOCYTOSINE; LIGAND; UNCLASSIFIED DRUG;

EID: 37849043411     PISSN: 00222623     EISSN: None     Source Type: Journal    
DOI: 10.1021/jm070829p     Document Type: Article
Times cited : (197)

References (55)
  • 1
    • 0042023711 scopus 로고    scopus 로고
    • Alzheimer Disease in the U.S. population: Prevalence estimates using the 2000 census
    • Herbert, L. E.; Scherr, P. A.; Bienias, J. L.; Bennett, D. A.; Evans, D. A. Alzheimer Disease in the U.S. population: prevalence estimates using the 2000 census. Arch. Neurol. 2003, 60, 1119-1122.
    • (2003) Arch. Neurol , vol.60 , pp. 1119-1122
    • Herbert, L.E.1    Scherr, P.A.2    Bienias, J.L.3    Bennett, D.A.4    Evans, D.A.5
  • 2
    • 37849051873 scopus 로고    scopus 로고
    • Losing a million minds: confronting the tragedy of Alzheimer's Disease and other dementias. U.S. Congress Office of Technology Assessment; U.S. Goverment Printing Office: Washington, DC, 1987; p 14.
    • Losing a million minds: confronting the tragedy of Alzheimer's Disease and other dementias. U.S. Congress Office of Technology Assessment; U.S. Goverment Printing Office: Washington, DC, 1987; p 14.
  • 3
    • 36248982272 scopus 로고    scopus 로고
    • NIH Publication No.03-3431; Alzheimer's Disease Education and Referral Center: Silver Spring, MD
    • Alzheimer's Disease medications fact sheet, NIH Publication No.03-3431; Alzheimer's Disease Education and Referral Center: Silver Spring, MD, 2006; pp 1-6.
    • (2006) Disease medications fact sheet , pp. 1-6
    • Alzheimer's1
  • 4
    • 0037135111 scopus 로고    scopus 로고
    • The amyloid hypothesis of Alzheimer's disease: Progress and problems on the road to therapeutics
    • Hardy, J.; Selkoe, D. J. The amyloid hypothesis of Alzheimer's disease: progress and problems on the road to therapeutics. Science 2002, 297, 353-356.
    • (2002) Science , vol.297 , pp. 353-356
    • Hardy, J.1    Selkoe, D.J.2
  • 5
    • 0033613129 scopus 로고    scopus 로고
    • Cellular mechanisms of β-amyloid production and secretion
    • Sinha, S.; Lieberburg, I. Cellular mechanisms of β-amyloid production and secretion. Proc. Natl. Acad. Sci. U.S.A. 1999, 96, 11049-11053.
    • (1999) Proc. Natl. Acad. Sci. U.S.A , vol.96 , pp. 11049-11053
    • Sinha, S.1    Lieberburg, I.2
  • 7
    • 0034652309 scopus 로고    scopus 로고
    • Human aspartic protease memapsin 2 cleaves the β-secretase site of β-amyloid precursor protein
    • Lin, X.; Koelsch, G.; Wu, S.; Downs, D.; Dashti, A.; Tang, J. Human aspartic protease memapsin 2 cleaves the β-secretase site of β-amyloid precursor protein. Proc. Natl. Acad. Sci. U.S.A. 2000, 97, 1456-1460.
    • (2000) Proc. Natl. Acad. Sci. U.S.A , vol.97 , pp. 1456-1460
    • Lin, X.1    Koelsch, G.2    Wu, S.3    Downs, D.4    Dashti, A.5    Tang, J.6
  • 8
    • 0033518251 scopus 로고    scopus 로고
    • Sinha, S.; Anderson, J. P.; Barbour, R.; Basi, G. S.; Caccavello, R.; Davis, D.; Doan, M.; Dovey, H. F.; Frigon, N.; Hong, J.; Jacobson-Croak, K.; Jewett, N.; Keim, P.; Knops, J.; Lieberburg, I.; Power, M.; Tan, H.; Tatsuno, G.; Tung, J.; Schenk, D.; Seubert, P.; Suomensaari, S. M.; Wang, S.; Walker, D.; Zhao, J.; McConlogue, L.; John, V. Purification and cloning of amyloid precursor protein β-secretase from human brain. Nature 1999, 402, 537-540.
    • Sinha, S.; Anderson, J. P.; Barbour, R.; Basi, G. S.; Caccavello, R.; Davis, D.; Doan, M.; Dovey, H. F.; Frigon, N.; Hong, J.; Jacobson-Croak, K.; Jewett, N.; Keim, P.; Knops, J.; Lieberburg, I.; Power, M.; Tan, H.; Tatsuno, G.; Tung, J.; Schenk, D.; Seubert, P.; Suomensaari, S. M.; Wang, S.; Walker, D.; Zhao, J.; McConlogue, L.; John, V. Purification and cloning of amyloid precursor protein β-secretase from human brain. Nature 1999, 402, 537-540.
  • 11
    • 0142092495 scopus 로고    scopus 로고
    • John, V.; Beck, J. P.; Bienkowski, M. J.; Sinha, S.; Heinrikson, R. L. Human β-Secretase (BACE) and BACE Inhibitors. J. Med. Chem. 2003, 46, 4625-4630.
    • John, V.; Beck, J. P.; Bienkowski, M. J.; Sinha, S.; Heinrikson, R. L. Human β-Secretase (BACE) and BACE Inhibitors. J. Med. Chem. 2003, 46, 4625-4630.
  • 12
    • 33751063056 scopus 로고    scopus 로고
    • Progress toward the discovery and development of efficacious BACE inhibitors
    • Durham, T. B.; Shepherd, T. A. Progress toward the discovery and development of efficacious BACE inhibitors. Curr. Opin. Drug Discovery Dev. 2006, 9, 776-791.
    • (2006) Curr. Opin. Drug Discovery Dev , vol.9 , pp. 776-791
    • Durham, T.B.1    Shepherd, T.A.2
  • 13
    • 33747606504 scopus 로고    scopus 로고
    • BACE inhibitors for the treatment of Alzheimer's disease
    • Baxter, E. W.; Reitz, A. B. BACE inhibitors for the treatment of Alzheimer's disease. Annu. Rep. Med. Chem. 2005, 40, 35-48.
    • (2005) Annu. Rep. Med. Chem , vol.40 , pp. 35-48
    • Baxter, E.W.1    Reitz, A.B.2
  • 15
    • 33745052352 scopus 로고    scopus 로고
    • Development of BACE-1 inhibitors for Alzheimer's disease
    • Guo, T.; Hobbs, D. W. Development of BACE-1 inhibitors for Alzheimer's disease. Curr. Med. Chem. 2006, 13, 1811-1829.
    • (2006) Curr. Med. Chem , vol.13 , pp. 1811-1829
    • Guo, T.1    Hobbs, D.W.2
  • 23
    • 32344436117 scopus 로고    scopus 로고
    • Yang, W.; Lu, W.; Lu, Y.; Zhong, M.; Sun, J.; Thomas, A. E.; Wilkinson, J. M.; Fucini, R. V.; Lam, M.; Randal, M.; Shi, X.-P.; Jacobs, J. W.; McDowell, R. S.; Gordon, E. M.; Ballinger, M. D. Aminoethylenes: a tetrahedral intermediate isostere yielding potent inhibitors of the aspartyl protease BACE-1. J. Med. Chem. 2006, 49, 839-842.
    • Yang, W.; Lu, W.; Lu, Y.; Zhong, M.; Sun, J.; Thomas, A. E.; Wilkinson, J. M.; Fucini, R. V.; Lam, M.; Randal, M.; Shi, X.-P.; Jacobs, J. W.; McDowell, R. S.; Gordon, E. M.; Ballinger, M. D. Aminoethylenes: a tetrahedral intermediate isostere yielding potent inhibitors of the aspartyl protease BACE-1. J. Med. Chem. 2006, 49, 839-842.
  • 26
    • 0034613320 scopus 로고    scopus 로고
    • Structure of the protease domain of memapsin 2 (β-secretase) complexed with inhibitor
    • Hong, L.; Koelsch, G.; Lin, X.; Wu, S.; Terzyan, S.; Ghosh, A. K.; Zhang, X. C.; Tang, J. Structure of the protease domain of memapsin 2 (β-secretase) complexed with inhibitor. Science 2000, 290, 150-153.
    • (2000) Science , vol.290 , pp. 150-153
    • Hong, L.1    Koelsch, G.2    Lin, X.3    Wu, S.4    Terzyan, S.5    Ghosh, A.K.6    Zhang, X.C.7    Tang, J.8
  • 27
    • 0032811868 scopus 로고    scopus 로고
    • Rapid calculation of polar molecular surface area and its application to the prediction of transport phenomena. 2. Prediction of blood-brain barrier penetration
    • Clark, D. E. Rapid calculation of polar molecular surface area and its application to the prediction of transport phenomena. 2. Prediction of blood-brain barrier penetration. J. Pharm. Sci. 1999, 88, 815-821.
    • (1999) J. Pharm. Sci , vol.88 , pp. 815-821
    • Clark, D.E.1
  • 28
    • 0035289779 scopus 로고    scopus 로고
    • Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings
    • Lipinski, C. A.; Lombardo, F.; Dominy, B. W.; Feeney, P. J. Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings. Adv. Drug Delivery Rev. 2001, 46, 3-26.
    • (2001) Adv. Drug Delivery Rev , vol.46 , pp. 3-26
    • Lipinski, C.A.1    Lombardo, F.2    Dominy, B.W.3    Feeney, P.J.4
  • 29
    • 1942453243 scopus 로고    scopus 로고
    • Hopkins, Andrew, L.; Groom, Colin, R.; Alex, A. Ligand efficiency: a useful metric for lead selection. Drug. Discovery Today 2004, 9, 430-431.
    • Hopkins, Andrew, L.; Groom, Colin, R.; Alex, A. Ligand efficiency: a useful metric for lead selection. Drug. Discovery Today 2004, 9, 430-431.
  • 30
    • 37849038532 scopus 로고    scopus 로고
    • 50.
    • 50.
  • 32
    • 9744221865 scopus 로고    scopus 로고
    • Coburn, C. A.; Stachel, S. J.; Li, Y.-M.; Rush, D. M.; Steele, T. G.; Chen-Dodson, E.; Holloway, M. K.; Xu, M.; Huang, Q.; Lai, M.-T.; DiMuzio, J.; Crouthamel, M.-C.; Shi, X.-P.; Sardana, V.; Chen, Z.; Munshi, S.; Kuo, L.; Makara, G. M.; Annis, D. A.; Tadikonda, P. K.; Nash, H. M.; Vacca, J. P. Identification of a small molecule nonpeptide active site β-secretase inhibitor that displays a nontraditional binding mode for aspartyl proteases. J. Med. Chem. 2004, 47, 6117-6119.
    • Coburn, C. A.; Stachel, S. J.; Li, Y.-M.; Rush, D. M.; Steele, T. G.; Chen-Dodson, E.; Holloway, M. K.; Xu, M.; Huang, Q.; Lai, M.-T.; DiMuzio, J.; Crouthamel, M.-C.; Shi, X.-P.; Sardana, V.; Chen, Z.; Munshi, S.; Kuo, L.; Makara, G. M.; Annis, D. A.; Tadikonda, P. K.; Nash, H. M.; Vacca, J. P. Identification of a small molecule nonpeptide active site β-secretase inhibitor that displays a nontraditional binding mode for aspartyl proteases. J. Med. Chem. 2004, 47, 6117-6119.
  • 33
    • 33144455805 scopus 로고    scopus 로고
    • BACE-1 inhibitory activities of new substituted phenyl-piperazine coupled to various heterocycles: Chromene, coumarin and quinoline
    • Garino, C.; Pietrancosta, N.; Laras, Y.; Moret, V.; Rolland, A.; Quelever, G.; Kraus, J.-L. BACE-1 inhibitory activities of new substituted phenyl-piperazine coupled to various heterocycles: Chromene, coumarin and quinoline. Bioorg. Med. Chem. Lett. 2006, 16, 1995-1999.
    • (2006) Bioorg. Med. Chem. Lett , vol.16 , pp. 1995-1999
    • Garino, C.1    Pietrancosta, N.2    Laras, Y.3    Moret, V.4    Rolland, A.5    Quelever, G.6    Kraus, J.-L.7
  • 35
    • 23444447457 scopus 로고    scopus 로고
    • Discovery of cell-permeable nonpeptide inhibitors of β-secretase by high-throughput docking and continuum electrostatics calculations
    • Huang, D.; Luethi, U.; Kolb, P.; Edler, K.; Cecchini, M.; Audetat, S.; Barberis, A.; Caflisch, A. Discovery of cell-permeable nonpeptide inhibitors of β-secretase by high-throughput docking and continuum electrostatics calculations. J. Med. Chem. 2005, 48, 5108-5111.
    • (2005) J. Med. Chem , vol.48 , pp. 5108-5111
    • Huang, D.1    Luethi, U.2    Kolb, P.3    Edler, K.4    Cecchini, M.5    Audetat, S.6    Barberis, A.7    Caflisch, A.8
  • 41
    • 33947476747 scopus 로고
    • Potential anticancer agents. LXXI. Diaminopyrimidines and diamino-s-triazines related to daraprim
    • Hyde, K. A.; Acton, E. M.; Baker, B. R.; Goodman, L. Potential anticancer agents. LXXI. Diaminopyrimidines and diamino-s-triazines related to daraprim. J. Org. Chem. 1962, 27, 1717-1722.
    • (1962) J. Org. Chem , vol.27 , pp. 1717-1722
    • Hyde, K.A.1    Acton, E.M.2    Baker, B.R.3    Goodman, L.4
  • 42
    • 0024416726 scopus 로고
    • Long-acting dihydropyridine calcium antagonists. 3. Synthesis and structure-activity relationships for a series of 2-[(heterocyclylmethoxy) methyl] derivatives
    • Alker, D.; Campbell, S. F.; Cross, P. E.; Burges, R. A.; Carter, A. J.; Gardiner, D. G. Long-acting dihydropyridine calcium antagonists. 3. Synthesis and structure-activity relationships for a series of 2-[(heterocyclylmethoxy) methyl] derivatives. J. Med. Chem. 1989, 32, 2381-2388.
    • (1989) J. Med. Chem , vol.32 , pp. 2381-2388
    • Alker, D.1    Campbell, S.F.2    Cross, P.E.3    Burges, R.A.4    Carter, A.J.5    Gardiner, D.G.6
  • 43
    • 37849027197 scopus 로고    scopus 로고
    • Burtner, R. R. 2-Amino-6-aryl-5,6-dihydro-4-hydroxypyrimidines. US Patent US2748120, 1956.
    • Burtner, R. R. 2-Amino-6-aryl-5,6-dihydro-4-hydroxypyrimidines. US Patent US2748120, 1956.
  • 44
    • 0000298078 scopus 로고    scopus 로고
    • Synthesis of enzymically stable analogues of GDP for binding studies with transducin, the G-protein of the visual photoreceptor
    • Vincent, S.; Grenier, S.; Valleix, A.; Salesse, C.; Lebeau, L.; Mioskowski, C. Synthesis of enzymically stable analogues of GDP for binding studies with transducin, the G-protein of the visual photoreceptor. J. Org. Chem. 1998, 63, 7244-7257.
    • (1998) J. Org. Chem , vol.63 , pp. 7244-7257
    • Vincent, S.1    Grenier, S.2    Valleix, A.3    Salesse, C.4    Lebeau, L.5    Mioskowski, C.6
  • 46
    • 0035543968 scopus 로고    scopus 로고
    • Conjugate additions of organocuprates to a 3-methylene-6-isopropyldiketopiperazine acceptor for the asymmetric synthesis of homochiral α-amino acids
    • Bull, S. D.; Davies, S. G.; Garner, A. C.; O'Shea, M. D. Conjugate additions of organocuprates to a 3-methylene-6-isopropyldiketopiperazine acceptor for the asymmetric synthesis of homochiral α-amino acids. J. Chem. Soc., Perkin Trans. 1 2001, 3281-3287.
    • (2001) J. Chem. Soc., Perkin Trans. 1 , pp. 3281-3287
    • Bull, S.D.1    Davies, S.G.2    Garner, A.C.3    O'Shea, M.D.4
  • 47
    • 4644364822 scopus 로고    scopus 로고
    • Apo and inhibitor complex structures of BACE (β-secretase)
    • Patel, S.; Vuillard, L.; Cleasby, A.; Murray, C. W.; Yon, J. Apo and inhibitor complex structures of BACE (β-secretase). J. Mol. Biol. 2004, 343, 407-416.
    • (2004) J. Mol. Biol , vol.343 , pp. 407-416
    • Patel, S.1    Vuillard, L.2    Cleasby, A.3    Murray, C.W.4    Yon, J.5
  • 48
    • 37849029741 scopus 로고    scopus 로고
    • Preparation of heterocyclic carboxamides as leukotriene antagonists. US Patent Cont.-in-part of U.S. Ser
    • No. 181,455, abandoned, 1990
    • Brown, F. J.; Matassa, V. G. Preparation of heterocyclic carboxamides as leukotriene antagonists. US Patent Cont.-in-part of U.S. Ser. No. 181,455, abandoned, 1990.
    • Brown, F.J.1    Matassa, V.G.2
  • 49
    • 0007884745 scopus 로고
    • 2R from acetylacetone and halides with ethanolic potassium carbonate. An alkylation-cleavage process
    • 2R from acetylacetone and halides with ethanolic potassium carbonate. An alkylation-cleavage process. J. Org. Chem. 1965, 30, 3321-3324.
    • (1965) J. Org. Chem , vol.30 , pp. 3321-3324
    • Boatman, S.1    Harris, T.M.2    Hauser, C.R.3
  • 51
    • 0028103275 scopus 로고
    • The CCP4 suite: Programs for protein crystallography
    • Bailey, S. The CCP4 suite: programs for protein crystallography. Acta Crystallogr., Sect. D: Biol. Crystallogr. 1994, D50, 760-763.
    • (1994) Acta Crystallogr., Sect. D: Biol. Crystallogr , vol.D50 , pp. 760-763
    • Bailey, S.1
  • 53
    • 0038820376 scopus 로고    scopus 로고
    • Hartshorn, M. J. AstexViewerTM: a visualization aid for structure-based drug design. J. Comput.-Aided Mol. Des. 2003, 16, 871-881.
    • Hartshorn, M. J. AstexViewerTM: a visualization aid for structure-based drug design. J. Comput.-Aided Mol. Des. 2003, 16, 871-881.
  • 54
  • 55
    • 0037277056 scopus 로고    scopus 로고
    • Comparison of batch and perfusion culture in combination with pilot-scale expanded bed purification for the production of soluble recombinant β-secretase
    • Luellau, E.; Kanttinen, A.; Hassel, J.; Berg, M.; Haag-Alvarsson, A.; Cederbrant, K.; Greenberg, B.; Fenge, C.; Schweikart, F. Comparison of batch and perfusion culture in combination with pilot-scale expanded bed purification for the production of soluble recombinant β-secretase. Biotechnol. Prog. 2003, 19, 37-44.
    • (2003) Biotechnol. Prog , vol.19 , pp. 37-44
    • Luellau, E.1    Kanttinen, A.2    Hassel, J.3    Berg, M.4    Haag-Alvarsson, A.5    Cederbrant, K.6    Greenberg, B.7    Fenge, C.8    Schweikart, F.9


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.