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Volumn 21, Issue 23, 2007, Pages 3110-3122

Dnmt3b promotes tumorigenesis in vivo by gene-specific de novo methylation and transcriptional silencing

Author keywords

APC; Cancer; DNA methylation; Dnmt3b; Epigenetics

Indexed keywords

APC PROTEIN; DNA METHYLTRANSFERASE 3A; DNA METHYLTRANSFERASE 3B; SOMATOMEDIN BINDING PROTEIN 2;

EID: 36849004469     PISSN: 08909369     EISSN: 15495477     Source Type: Journal    
DOI: 10.1101/gad.1594007     Document Type: Article
Times cited : (236)

References (69)
  • 1
    • 0035943709 scopus 로고    scopus 로고
    • Dnmt3a and Dnmt3b are transcriptional repressors that exhibit unique localization properties to heterochromatin
    • Bachman, K.E., Rountree, M.R., and Baylin, S.B. 2001. Dnmt3a and Dnmt3b are transcriptional repressors that exhibit unique localization properties to heterochromatin. J. Biol. Chem. 276: 32282-32287.
    • (2001) J. Biol. Chem , vol.276 , pp. 32282-32287
    • Bachman, K.E.1    Rountree, M.R.2    Baylin, S.B.3
  • 2
    • 33644846509 scopus 로고    scopus 로고
    • Epigenetic gene silencing in cancer - A mechanism for early oncogenic pathway addiction?
    • Baylin, S.B. and Ohm, J.E. 2006. Epigenetic gene silencing in cancer - A mechanism for early oncogenic pathway addiction? Nat. Rev. Cancer 6: 107-116.
    • (2006) Nat. Rev. Cancer , vol.6 , pp. 107-116
    • Baylin, S.B.1    Ohm, J.E.2
  • 4
    • 32344453096 scopus 로고    scopus 로고
    • Efficient method to generate single-copy transgenic mice by site-specific integration in embryonic stem cells
    • Beard, C., Hochedlinger, K., Plath, K., Wutz, A., and Jaenisch, R. 2006. Efficient method to generate single-copy transgenic mice by site-specific integration in embryonic stem cells. Genesis 44: 23-28.
    • (2006) Genesis , vol.44 , pp. 23-28
    • Beard, C.1    Hochedlinger, K.2    Plath, K.3    Wutz, A.4    Jaenisch, R.5
  • 5
    • 0034713375 scopus 로고    scopus 로고
    • Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene
    • Bell, A.C. and Felsenfeld, G. 2000. Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene. Nature 405: 482-485.
    • (2000) Nature , vol.405 , pp. 482-485
    • Bell, A.C.1    Felsenfeld, G.2
  • 6
    • 0037355506 scopus 로고    scopus 로고
    • Unanswered questions about the role of promoter methylation in carcinogenesis
    • Bestor, T.H. 2003. Unanswered questions about the role of promoter methylation in carcinogenesis. Ann. N. Y. Acad. Sci. 983: 22-27.
    • (2003) Ann. N. Y. Acad. Sci , vol.983 , pp. 22-27
    • Bestor, T.H.1
  • 11
    • 0037064088 scopus 로고    scopus 로고
    • A novel Dnmt3a isoform produced from an alternative promoter localizes to euchromatin and its expression correlates with active de novo methylation
    • Chen, T., Ueda, Y., Xie, S., and Li, E. 2002. A novel Dnmt3a isoform produced from an alternative promoter localizes to euchromatin and its expression correlates with active de novo methylation. J. Biol. Chem. 277: 38746-38754.
    • (2002) J. Biol. Chem , vol.277 , pp. 38746-38754
    • Chen, T.1    Ueda, Y.2    Xie, S.3    Li, E.4
  • 12
    • 0042132027 scopus 로고    scopus 로고
    • Establishment and maintenance of genomic methylation patterns in mouse embryonic stem cells by Dnmt3a and Dnmt3b
    • Chen, T., Ueda, Y., Dodge, J.E., Wang, Z., and Li, E. 2003. Establishment and maintenance of genomic methylation patterns in mouse embryonic stem cells by Dnmt3a and Dnmt3b. Mol. Cell. Biol. 23: 5594-5605.
    • (2003) Mol. Cell. Biol , vol.23 , pp. 5594-5605
    • Chen, T.1    Ueda, Y.2    Dodge, J.E.3    Wang, Z.4    Li, E.5
  • 13
    • 33746808398 scopus 로고    scopus 로고
    • Wnt/β-catenin signaling in development and disease
    • Clevers, H. 2006. Wnt/β-catenin signaling in development and disease. Cell 127: 469-480.
    • (2006) Cell , vol.127 , pp. 469-480
    • Clevers, H.1
  • 14
    • 34247110778 scopus 로고    scopus 로고
    • Mitotic recombination and uniparental disomy in Beckwith-Wiedemann syndrome
    • Cooper, W.N., Curley, R., Macdonald, F., and Maher, E.R. 2007. Mitotic recombination and uniparental disomy in Beckwith-Wiedemann syndrome. Genomics 89: 613-617.
    • (2007) Genomics , vol.89 , pp. 613-617
    • Cooper, W.N.1    Curley, R.2    Macdonald, F.3    Maher, E.R.4
  • 15
    • 0025650657 scopus 로고
    • Analysis of 5-methylcytosine in DNA by isotope dilution gas chromatography-mass spectrometry
    • Crain, P.F. 1990. Analysis of 5-methylcytosine in DNA by isotope dilution gas chromatography-mass spectrometry. Methods Enzymol. 193: 857-865.
    • (1990) Methods Enzymol , vol.193 , pp. 857-865
    • Crain, P.F.1
  • 17
    • 0346095214 scopus 로고    scopus 로고
    • The insulin-like growth factor axis in cell cycle progression
    • Dupont, J., Pierre, A., Froment, P., and Moreau, C. 2003. The insulin-like growth factor axis in cell cycle progression. Horm. Metab. Res. 35: 740-750.
    • (2003) Horm. Metab. Res , vol.35 , pp. 740-750
    • Dupont, J.1    Pierre, A.2    Froment, P.3    Moreau, C.4
  • 18
    • 0242584454 scopus 로고    scopus 로고
    • Chromosomal instability and tumors promoted by DNA hypomethylation
    • Eden, A., Gaudet, F., Waghmare, A., and Jaenisch, R. 2003. Chromosomal instability and tumors promoted by DNA hypomethylation. Science 300: 455.
    • (2003) Science , vol.300 , pp. 455
    • Eden, A.1    Gaudet, F.2    Waghmare, A.3    Jaenisch, R.4
  • 22
    • 1042278765 scopus 로고    scopus 로고
    • The history of cancer epigenetics
    • Feinberg, A.P. and Tycko, B. 2004. The history of cancer epigenetics. Nat. Rev. Cancer 4: 143-153.
    • (2004) Nat. Rev. Cancer , vol.4 , pp. 143-153
    • Feinberg, A.P.1    Tycko, B.2
  • 23
    • 0020699979 scopus 로고
    • Hypomethylation distinguishes genes of some human cancers from their normal counterparts
    • Feinberg, A.P. and Vogelstein, B. 1983. Hypomethylation distinguishes genes of some human cancers from their normal counterparts. Nature 301: 89-92.
    • (1983) Nature , vol.301 , pp. 89-92
    • Feinberg, A.P.1    Vogelstein, B.2
  • 24
    • 29244469466 scopus 로고    scopus 로고
    • The epigenetic progenitor origin of human cancer
    • Feinberg, A.P., Ohlsson, R., and Henikoff, S. 2006. The epigenetic progenitor origin of human cancer. Nat. Rev. Genet. 7: 21-33.
    • (2006) Nat. Rev. Genet , vol.7 , pp. 21-33
    • Feinberg, A.P.1    Ohlsson, R.2    Henikoff, S.3
  • 25
    • 0036892340 scopus 로고    scopus 로고
    • Identification and isolation of candidate human colonic clonogenic cells based on cell surface integrin expression
    • Fujimoto, K., Beauchamp, R.D., and Whitehead, R.H. 2002. Identification and isolation of candidate human colonic clonogenic cells based on cell surface integrin expression. Gastroenterology 123: 1941-1948.
    • (2002) Gastroenterology , vol.123 , pp. 1941-1948
    • Fujimoto, K.1    Beauchamp, R.D.2    Whitehead, R.H.3
  • 27
    • 15744401773 scopus 로고    scopus 로고
    • Eukaryotic cytosine methyltransferases
    • Goll, M.G. and Bestor, T.H. 2005. Eukaryotic cytosine methyltransferases. Annu. Rev. Biochem. 74: 481-514.
    • (2005) Annu. Rev. Biochem , vol.74 , pp. 481-514
    • Goll, M.G.1    Bestor, T.H.2
  • 28
    • 0024365892 scopus 로고
    • Epigenetic changes may contribute to the formation and spontaneous regression of retinoblastoma
    • Greger, V., Passarge, E., Hopping, W., Messmer, E., and Horsthemke, B. 1989. Epigenetic changes may contribute to the formation and spontaneous regression of retinoblastoma. Hum. Genet. 83: 155-158.
    • (1989) Hum. Genet , vol.83 , pp. 155-158
    • Greger, V.1    Passarge, E.2    Hopping, W.3    Messmer, E.4    Horsthemke, B.5
  • 29
    • 0027962591 scopus 로고
    • Frequency and parental origin of hypermethylated RB1 alleles in retinoblastoma
    • Greger, V., Debus, N., Lohmann, D., Hopping, W., Passarge, E., and Horsthemke, B. 1994. Frequency and parental origin of hypermethylated RB1 alleles in retinoblastoma. Hum. Genet. 94: 491-496.
    • (1994) Hum. Genet , vol.94 , pp. 491-496
    • Greger, V.1    Debus, N.2    Lohmann, D.3    Hopping, W.4    Passarge, E.5    Horsthemke, B.6
  • 30
    • 33845441511 scopus 로고    scopus 로고
    • Differential recruitment of methylated CpG binding domains by the orphan receptor GCNF initiates the repression and silencing of Oct4 expression
    • Gu, P., Le Menuet, D., Chung, A.C., and Cooney, A.J. 2006. Differential recruitment of methylated CpG binding domains by the orphan receptor GCNF initiates the repression and silencing of Oct4 expression. Mol. Cell. Biol. 26: 9471-9483.
    • (2006) Mol. Cell. Biol , vol.26 , pp. 9471-9483
    • Gu, P.1    Le Menuet, D.2    Chung, A.C.3    Cooney, A.J.4
  • 31
    • 0030871047 scopus 로고    scopus 로고
    • Genomic imprinting and Igf2 influence liver tumorigenesis and loss of heterozygosity in SV40 T antigen transgenic mice
    • Haddad, R. and Held, W.A. 1997. Genomic imprinting and Igf2 influence liver tumorigenesis and loss of heterozygosity in SV40 T antigen transgenic mice. Cancer Res. 57: 4615-4623.
    • (1997) Cancer Res , vol.57 , pp. 4615-4623
    • Haddad, R.1    Held, W.A.2
  • 32
    • 0034713275 scopus 로고    scopus 로고
    • CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus
    • Hark, A.T., Schoenherr, C.J., Katz, D.J., Ingram, R.S., Levorse, J.M., and Tilghman, S.M. 2000. CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus. Nature 405: 486-489.
    • (2000) Nature , vol.405 , pp. 486-489
    • Hark, A.T.1    Schoenherr, C.J.2    Katz, D.J.3    Ingram, R.S.4    Levorse, J.M.5    Tilghman, S.M.6
  • 34
    • 0345357773 scopus 로고    scopus 로고
    • Gene silencing in cancer in association with promoter hypermethylation
    • Herman, J.G. and Baylin, S.B. 2003. Gene silencing in cancer in association with promoter hypermethylation. N. Engl. J. Med. 349: 2042-2054.
    • (2003) N. Engl. J. Med , vol.349 , pp. 2042-2054
    • Herman, J.G.1    Baylin, S.B.2
  • 35
    • 33847065486 scopus 로고    scopus 로고
    • The epigenomics of cancer
    • Jones, P.A. and Baylin, S.B. 2007. The epigenomics of cancer. Cell 128: 683-692.
    • (2007) Cell , vol.128 , pp. 683-692
    • Jones, P.A.1    Baylin, S.B.2
  • 36
    • 0036714307 scopus 로고    scopus 로고
    • Secreted Frizzled-related proteins: Searching for relationships and patterns
    • Jones, S.E. and Jomary, C. 2002. Secreted Frizzled-related proteins: Searching for relationships and patterns. Bioessays 24: 811-820.
    • (2002) Bioessays , vol.24 , pp. 811-820
    • Jones, S.E.1    Jomary, C.2
  • 37
    • 3042584653 scopus 로고    scopus 로고
    • Essential role for de novo DNA methyltransferase Dnmt3a in paternal and maternal imprinting
    • Kaneda, M., Okano, M., Hata, K., Sado, T., Tsujimoto, N., Li, E., and Sasaki, H. 2004. Essential role for de novo DNA methyltransferase Dnmt3a in paternal and maternal imprinting. Nature 429: 900-903.
    • (2004) Nature , vol.429 , pp. 900-903
    • Kaneda, M.1    Okano, M.2    Hata, K.3    Sado, T.4    Tsujimoto, N.5    Li, E.6    Sasaki, H.7
  • 39
    • 33746063711 scopus 로고    scopus 로고
    • CTCF binding at the H19 imprinting control region mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to Igf2
    • Kurukuti, S., Tiwari, V.K., Tavoosidana, G., Pugacheva, E., Murrell, A., Zhao, Z., Lobanenkov, V., Reik, W., and Ohlsson, R. 2006. CTCF binding at the H19 imprinting control region mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to Igf2. Proc. Natl. Acad. Sci. 103: 10684-10689.
    • (2006) Proc. Natl. Acad. Sci , vol.103 , pp. 10684-10689
    • Kurukuti, S.1    Tiwari, V.K.2    Tavoosidana, G.3    Pugacheva, E.4    Murrell, A.5    Zhao, Z.6    Lobanenkov, V.7    Reik, W.8    Ohlsson, R.9
  • 42
    • 33845925394 scopus 로고    scopus 로고
    • Chromatin immunoprecipitation and microarray-based analysis of protein location
    • Lee, T.I., Johnstone, S.E., and Young, R.A. 2006b. Chromatin immunoprecipitation and microarray-based analysis of protein location. Nat. Protoc. 1: 729-748.
    • (2006) Nat. Protoc , vol.1 , pp. 729-748
    • Lee, T.I.1    Johnstone, S.E.2    Young, R.A.3
  • 45
    • 0343953594 scopus 로고    scopus 로고
    • Hypermethylation can selectively silence individual p16ink4A alleles in neoplasia
    • Myohanen, S.K., Baylin, S.B., and Herman, J.G. 1998. Hypermethylation can selectively silence individual p16ink4A alleles in neoplasia. Cancer Res. 58: 591-593.
    • (1998) Cancer Res , vol.58 , pp. 591-593
    • Myohanen, S.K.1    Baylin, S.B.2    Herman, J.G.3
  • 46
    • 33846569960 scopus 로고    scopus 로고
    • A stem cell-like chromatin pattern may predispose tumor suppressor genes to DNA hypermethylation and heritable silencing
    • Ohm, J.E., McGarvey, K.M., Yu, X., Cheng, L., Schuebel, K.E., Cope, L., Mohammad, H.P., Chen, W., Daniel, V.C., Yu, W., et al. 2007. A stem cell-like chromatin pattern may predispose tumor suppressor genes to DNA hypermethylation and heritable silencing. Nat. Genet. 39: 237-242.
    • (2007) Nat. Genet , vol.39 , pp. 237-242
    • Ohm, J.E.1    McGarvey, K.M.2    Yu, X.3    Cheng, L.4    Schuebel, K.E.5    Cope, L.6    Mohammad, H.P.7    Chen, W.8    Daniel, V.C.9    Yu, W.10
  • 47
    • 33744552284 scopus 로고    scopus 로고
    • CpG sites preferentially methylated by Dnmt3a in vivo
    • Oka, M., Rodic, N., Graddy, J., Chang, L.J., and Terada, N. 2006. CpG sites preferentially methylated by Dnmt3a in vivo. J. Biol. Chem. 281: 9901-9908.
    • (2006) J. Biol. Chem , vol.281 , pp. 9901-9908
    • Oka, M.1    Rodic, N.2    Graddy, J.3    Chang, L.J.4    Terada, N.5
  • 48
    • 0031860739 scopus 로고    scopus 로고
    • Cloning and characterization of a family of novel mammalian DNA (cytosine-5) methyltransferases
    • Okano, M., Xie, S., and Li, E. 1998. Cloning and characterization of a family of novel mammalian DNA (cytosine-5) methyltransferases. Nat. Genet. 19: 219-220.
    • (1998) Nat. Genet , vol.19 , pp. 219-220
    • Okano, M.1    Xie, S.2    Li, E.3
  • 49
    • 0033615717 scopus 로고    scopus 로고
    • DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development
    • Okano, M., Bell, D.W., Haber, D.A., and Li, E. 1999. DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development. Cell 99: 247-257.
    • (1999) Cell , vol.99 , pp. 247-257
    • Okano, M.1    Bell, D.W.2    Haber, D.A.3    Li, E.4
  • 51
    • 33750991081 scopus 로고    scopus 로고
    • Specific differentially methylated domain sequences direct the maintenance of methylation at imprinted genes
    • Reinhart, B., Paoloni-Giacobino, A., and Chaillet, J.R. 2006. Specific differentially methylated domain sequences direct the maintenance of methylation at imprinted genes. Mol. Cell. Biol. 26: 8347-8356.
    • (2006) Mol. Cell. Biol , vol.26 , pp. 8347-8356
    • Reinhart, B.1    Paoloni-Giacobino, A.2    Chaillet, J.R.3
  • 52
    • 0037224722 scopus 로고    scopus 로고
    • DNMT1 is required to maintain CpG methylation and aberrant gene silencing in human cancer cells
    • Robert, M.F., Morin, S., Beaulieu, N., Gauthier, F., Chute, I.C., Barsalou, A., and MacLeod, A.R. 2003. DNMT1 is required to maintain CpG methylation and aberrant gene silencing in human cancer cells. Nat. Genet. 33: 61-65.
    • (2003) Nat. Genet , vol.33 , pp. 61-65
    • Robert, M.F.1    Morin, S.2    Beaulieu, N.3    Gauthier, F.4    Chute, I.C.5    Barsalou, A.6    MacLeod, A.R.7
  • 53
    • 24044511839 scopus 로고    scopus 로고
    • Characterization of cis- and trans-acting elements in the imprinted human SNURF-SNRPN locus
    • Rodriguez-Jato, S., Nicholls, R.D., Driscoll, D.J., and Yang, T.P. 2005. Characterization of cis- and trans-acting elements in the imprinted human SNURF-SNRPN locus. Nucleic Acids Res. 33: 4740-4753.
    • (2005) Nucleic Acids Res , vol.33 , pp. 4740-4753
    • Rodriguez-Jato, S.1    Nicholls, R.D.2    Driscoll, D.J.3    Yang, T.P.4
  • 59
    • 0037133565 scopus 로고    scopus 로고
    • Comprehensive analysis of CpG islands in human chromosomes 21 and 22
    • Takai, D. and Jones, P.A. 2002. Comprehensive analysis of CpG islands in human chromosomes 21 and 22. Proc. Natl. Acad. Sci. 99: 3740-3745.
    • (2002) Proc. Natl. Acad. Sci , vol.99 , pp. 3740-3745
    • Takai, D.1    Jones, P.A.2
  • 61
    • 0031662164 scopus 로고    scopus 로고
    • Transcription of IAP endogenous retroviruses is constrained by cytosine methylation
    • Walsh, C.P., Chaillet, J.R., and Bestor, T.H. 1998. Transcription of IAP endogenous retroviruses is constrained by cytosine methylation. Nat. Genet. 20: 116-117.
    • (1998) Nat. Genet , vol.20 , pp. 116-117
    • Walsh, C.P.1    Chaillet, J.R.2    Bestor, T.H.3
  • 62
    • 23044514626 scopus 로고    scopus 로고
    • Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells
    • Weber, M., Davies, J.J., Wittig, D., Oakeley, E.J., Haase, M., Lam, W.L., and Schubeler, D. 2005. Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells. Nat. Genet. 37: 853-862.
    • (2005) Nat. Genet , vol.37 , pp. 853-862
    • Weber, M.1    Davies, J.J.2    Wittig, D.3    Oakeley, E.J.4    Haase, M.5    Lam, W.L.6    Schubeler, D.7
  • 65
  • 66
    • 0027504621 scopus 로고
    • Expression of an exogenous eukaryotic DNA methyltransferase gene induces transformation of NIH 3T3 cells
    • Wu, J., Issa, J.P., Herman, J., Bassett Jr., D.E., Nelkin, B.D., and Baylin, S.B. 1993. Expression of an exogenous eukaryotic DNA methyltransferase gene induces transformation of NIH 3T3 cells. Proc. Natl. Acad. Sci. 90: 8891-8895.
    • (1993) Proc. Natl. Acad. Sci , vol.90 , pp. 8891-8895
    • Wu, J.1    Issa, J.P.2    Herman, J.3    Bassett Jr., D.E.4    Nelkin, B.D.5    Baylin, S.B.6


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