메뉴 건너뛰기




Volumn 32, Issue WEB SERVER ISS., 2004, Pages

DEQOR: A web-based tool for the design and quality control of siRNAs

Author keywords

[No Author keywords available]

Indexed keywords

CYTOSINE; DOUBLE STRANDED RNA; GUANINE; NUCLEOTIDE; RIBONUCLEASE; SMALL INTERFERING RNA;

EID: 3242891277     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/gkh408     Document Type: Article
Times cited : (141)

References (33)
  • 1
    • 0037062951 scopus 로고    scopus 로고
    • RNA interference
    • Hannon,G.J. (2002) RNA interference. Nature, 418, 244-251.
    • (2002) Nature , vol.418 , pp. 244-251
    • Hannon, G.J.1
  • 3
    • 0033669621 scopus 로고    scopus 로고
    • Post-transcriptional gene silencing across kingdoms
    • Cogoni,C. and Macino,G. (2000) Post-transcriptional gene silencing across kingdoms. Curr. Opin. Genet. Dev., 10, 638-643.
    • (2000) Curr. Opin. Genet. Dev. , vol.10 , pp. 638-643
    • Cogoni, C.1    Macino, G.2
  • 4
    • 0034737818 scopus 로고    scopus 로고
    • Molecular biology. RNA interference
    • Sharp,P.A. and Zamore,P.D. (2000) Molecular biology. RNA interference. Science, 287, 2431-2433.
    • (2000) Science , vol.287 , pp. 2431-2433
    • Sharp, P.A.1    Zamore, P.D.2
  • 5
    • 0035281741 scopus 로고    scopus 로고
    • RNA interference - 2001
    • Sharp,P.A. (2001) RNA interference - 2001. Genes Dev., 15, 485-490.
    • (2001) Genes Dev. , vol.15 , pp. 485-490
    • Sharp, P.A.1
  • 7
    • 0034877670 scopus 로고    scopus 로고
    • RNA interference: Listening to the sound of silence
    • Zamore,P.D. (2001) RNA interference: listening to the sound of silence. Nature Struct. Biol., 8, 746-750.
    • (2001) Nature Struct. Biol. , vol.8 , pp. 746-750
    • Zamore, P.D.1
  • 12
    • 0038369994 scopus 로고    scopus 로고
    • Functional genomic analysis of apoptotic DNA degradation in C. elegans
    • Parrish,J.Z. and Xue,D. (2003) Functional genomic analysis of apoptotic DNA degradation in C. elegans. Mol. Cell., 11, 987-996.
    • (2003) Mol. Cell. , vol.11 , pp. 987-996
    • Parrish, J.Z.1    Xue, D.2
  • 13
    • 0038725897 scopus 로고    scopus 로고
    • Genome-wide RNAi screening in Caenorhabditis elegans
    • Kamath,R.S. and Ahringer,J. (2003) Genome-wide RNAi screening in Caenorhabditis elegans. Methods, 30, 313-321.
    • (2003) Methods , vol.30 , pp. 313-321
    • Kamath, R.S.1    Ahringer, J.2
  • 14
    • 0037566678 scopus 로고    scopus 로고
    • Genome-wide analysis of nuclear mRNA export pathways in Drosophila
    • Herold,A., Teixeira,L. and Izaurralde,E. (2003) Genome-wide analysis of nuclear mRNA export pathways in Drosophila. EMBO J., 22, 2472-2483.
    • (2003) EMBO J. , vol.22 , pp. 2472-2483
    • Herold, A.1    Teixeira, L.2    Izaurralde, E.3
  • 16
    • 0033230617 scopus 로고    scopus 로고
    • PKR; a sentinel kinase for cellular stress
    • Williams,B.R. (1999) PKR; a sentinel kinase for cellular stress. Oncogene, 18, 6112-6120.
    • (1999) Oncogene , vol.18 , pp. 6112-6120
    • Williams, B.R.1
  • 18
    • 0035942736 scopus 로고    scopus 로고
    • Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells
    • Elbashir,S.M., Harborth,J., Lendeckel,W., Yalcin,A., Weber,K. and Tuschl,T. (2001) Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells. Nature, 411, 494-498.
    • (2001) Nature , vol.411 , pp. 494-498
    • Elbashir, S.M.1    Harborth, J.2    Lendeckel, W.3    Yalcin, A.4    Weber, K.5    Tuschl, T.6
  • 19
    • 0037089135 scopus 로고    scopus 로고
    • Positional effects of short interfering RNAs targeting the human coagulation trigger Tissue Factor
    • Holen,T., Amarzguioui,M., Wiiger,M.T., Babaie,E. and Prydz,H. (2002) Positional effects of short interfering RNAs targeting the human coagulation trigger Tissue Factor. Nucleic Acids Res., 30, 1757-1766.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 1757-1766
    • Holen, T.1    Amarzguioui, M.2    Wiiger, M.T.3    Babaie, E.4    Prydz, H.5
  • 20
    • 0037195064 scopus 로고    scopus 로고
    • Tissue-specific RNA interference in postimplantation mouse embryos with endoribonuclease-prepared short interfering RNA
    • Calegari,F., Haubensak,W., Yang,D., Huttner,W.B. and Buchholz,F. (2002) Tissue-specific RNA interference in postimplantation mouse embryos with endoribonuclease-prepared short interfering RNA. Proc. Natl Acad. Sci., USA, 99, 14236-14240.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 14236-14240
    • Calegari, F.1    Haubensak, W.2    Yang, D.3    Huttner, W.B.4    Buchholz, F.5
  • 21
    • 0037162522 scopus 로고    scopus 로고
    • Short RNA duplexes produced by hydrolysis with Escherichia coli RNase III mediate effective RNA interference in mammalian cells
    • Yang,D., Buchholz,F., Huang,Z., Goga,A., Chen,C.Y., Brodsky,F.M. and Bishop,J.M. (2002) Short RNA duplexes produced by hydrolysis with Escherichia coli RNase III mediate effective RNA interference in mammalian cells. Proc. Natl Acad. Sci., USA, 99, 9942-9947.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 9942-9947
    • Yang, D.1    Buchholz, F.2    Huang, Z.3    Goga, A.4    Chen, C.Y.5    Brodsky, F.M.6    Bishop, J.M.7
  • 22
    • 0037335550 scopus 로고    scopus 로고
    • Recombinant Dicer efficiently converts large dsRNAs into siRNAs suitable for gene silencing
    • Myers,J.W., Jones,J.T., Meyer,T. and Ferrell,J.E.,Jr (2003) Recombinant Dicer efficiently converts large dsRNAs into siRNAs suitable for gene silencing. Nature Biotechnol., 21, 324-328.
    • (2003) Nature Biotechnol. , vol.21 , pp. 324-328
    • Myers, J.W.1    Jones, J.T.2    Meyer, T.3    Ferrell Jr., J.E.4
  • 23
    • 0037327444 scopus 로고    scopus 로고
    • siRNAs generated by recombinant human Dicer induce specific and significant but target site-independent gene silencing in human cells
    • Kawasaki,H., Suyama,E., Iyo,M. and Taira,K. (2003) siRNAs generated by recombinant human Dicer induce specific and significant but target site-independent gene silencing in human cells. Nucleic Acids Res., 31, 981-987.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 981-987
    • Kawasaki, H.1    Suyama, E.2    Iyo, M.3    Taira, K.4
  • 24
    • 0642307773 scopus 로고    scopus 로고
    • RNA interference: Gene silencing in the fast lane
    • Kittler,R. and Buchholz,F. (2003) RNA interference: gene silencing in the fast lane. Semin. Cancer Biol., 13, 259-265.
    • (2003) Semin. Cancer Biol. , vol.13 , pp. 259-265
    • Kittler, R.1    Buchholz, F.2
  • 29
    • 0142165224 scopus 로고    scopus 로고
    • Functional siRNAs and miRNAs exhibit strand bias
    • Khvorova,A., Reynolds,A. and Jayasena,S.D. (2003) Functional siRNAs and miRNAs exhibit strand bias. Cell, 115, 505.
    • (2003) Cell , vol.115 , pp. 505
    • Khvorova, A.1    Reynolds, A.2    Jayasena, S.D.3
  • 31
    • 0035887005 scopus 로고    scopus 로고
    • Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans
    • Ketting,R.F., Fischer,S.E., Bernstein,E., Sijen,T., Hannon,G.J. and Plasterk,R.H. (2001) Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans. Genes Dev., 15, 2654-2659.
    • (2001) Genes Dev. , vol.15 , pp. 2654-2659
    • Ketting, R.F.1    Fischer, S.E.2    Bernstein, E.3    Sijen, T.4    Hannon, G.J.5    Plasterk, R.H.6
  • 32
    • 0034737298 scopus 로고    scopus 로고
    • RNAi: Double-stranded RNA directs the ATP-dependent cleavage of mRNA at 21 to 23 nucleotide intervals
    • Zamore,P.D., Tuschl,T., Sharp,P.A. and Bartel,D.P. (2000) RNAi: double-stranded RNA directs the ATP-dependent cleavage of mRNA at 21 to 23 nucleotide intervals. Cell, 101, 25-33.
    • (2000) Cell , vol.101 , pp. 25-33
    • Zamore, P.D.1    Tuschl, T.2    Sharp, P.A.3    Bartel, D.P.4
  • 33
    • 0036845374 scopus 로고    scopus 로고
    • Human Dicer preferentially cleaves dsRNAs at their termini without a requirement for ATP
    • Zhang,H., Kolb,F.A., Brondani,V., Billy,E. and Filipowicz,W. (2002) Human Dicer preferentially cleaves dsRNAs at their termini without a requirement for ATP. EMBO J., 21, 5875-5885.
    • (2002) EMBO J. , vol.21 , pp. 5875-5885
    • Zhang, H.1    Kolb, F.A.2    Brondani, V.3    Billy, E.4    Filipowicz, W.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.