메뉴 건너뛰기




Volumn 11, Issue 4, 2003, Pages 987-996

Functional genomic analysis of apoptotic DNA degradation in C. elegans

Author keywords

[No Author keywords available]

Indexed keywords

CELL DEATH RELATED NUCLEASE 1; CELL DEATH RELATED NUCLEASE 2; CELL DEATH RELATED NUCLEASE 3; CELL DEATH RELATED NUCLEASE 4; CELL DEATH RELATED NUCLEASE 5; CELL DEATH RELATED NUCLEASE 6; NUCLEASE; NUCLEASE 1; NUCLEASE CPS 6; NUCLEASE CYP 13; RNA; UNCLASSIFIED DRUG;

EID: 0038369994     PISSN: 10972765     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1097-2765(03)00095-9     Document Type: Article
Times cited : (115)

References (55)
  • 1
    • 0033393804 scopus 로고    scopus 로고
    • Cyclophilins and their possible role in the stress response
    • Andreeva L., Heads R., Green C.J. Cyclophilins and their possible role in the stress response. Int. J. Exp. Pathol. 80:1999;305-315.
    • (1999) Int. J. Exp. Pathol. , vol.80 , pp. 305-315
    • Andreeva, L.1    Heads, R.2    Green, C.J.3
  • 3
    • 0025326912 scopus 로고
    • Immunogenic DNA-related factors. Nucleosomes spontaneously released from normal murine lymphoid cells stimulate proliferation and immunoglobulin synthesis of normal mouse lymphocytes
    • Bell D.A., Morrison B., VandenBygaart P. Immunogenic DNA-related factors. Nucleosomes spontaneously released from normal murine lymphoid cells stimulate proliferation and immunoglobulin synthesis of normal mouse lymphocytes. J. Clin. Invest. 85:1990;1487-1496.
    • (1990) J. Clin. Invest. , vol.85 , pp. 1487-1496
    • Bell, D.A.1    Morrison, B.2    VandenBygaart, P.3
  • 6
    • 0016063911 scopus 로고
    • The genetics of Caenorhabditis elegans
    • Brenner S. The genetics of Caenorhabditis elegans. Genetics. 77:1974;71-94.
    • (1974) Genetics , vol.77 , pp. 71-94
    • Brenner, S.1
  • 7
    • 0035080095 scopus 로고    scopus 로고
    • The human exosome: An autoantigenic complex of exoribonucleases in myositis and scleroderma
    • Brouwer R., Pruijn G.J., van Venrooij W.J. The human exosome. an autoantigenic complex of exoribonucleases in myositis and scleroderma Arthritis Res. 3:2001;102-106.
    • (2001) Arthritis Res. , vol.3 , pp. 102-106
    • Brouwer, R.1    Pruijn, G.J.2    Van Venrooij, W.J.3
  • 9
    • 0032509302 scopus 로고    scopus 로고
    • Genome sequence of the nematode C. elegans: A platform for investigating biology. The C. elegans Sequencing Consortium
    • The C. elegans Sequencing Consortium Genome sequence of the nematode C. elegans. a platform for investigating biology. The C. elegans Sequencing Consortium Science. 282:1998;2012-2018.
    • (1998) Science , vol.282 , pp. 2012-2018
  • 10
    • 0022497852 scopus 로고
    • Genetic control of programmed cell death in the nematode C. elegans
    • Ellis H.M., Horvitz H.R. Genetic control of programmed cell death in the nematode C. elegans. Cell. 44:1986;817-829.
    • (1986) Cell , vol.44 , pp. 817-829
    • Ellis, H.M.1    Horvitz, H.R.2
  • 11
    • 0031888955 scopus 로고    scopus 로고
    • A caspase-activated DNase that degrades DNA during apoptosis, and its inhibitor ICAD
    • Enari M., Sakahira H., Yokoyama H., Okawa K., Iwamatsu A., Nagata S. A caspase-activated DNase that degrades DNA during apoptosis, and its inhibitor ICAD. Nature. 391:1998;43-50.
    • (1998) Nature , vol.391 , pp. 43-50
    • Enari, M.1    Sakahira, H.2    Yokoyama, H.3    Okawa, K.4    Iwamatsu, A.5    Nagata, S.6
  • 12
    • 0032545933 scopus 로고    scopus 로고
    • Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans
    • Fire A., Xu S., Montgomery M.K., Kostas S.A., Driver S.E., Mello C.C. Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature. 391:1998;806-811.
    • (1998) Nature , vol.391 , pp. 806-811
    • Fire, A.1    Xu, S.2    Montgomery, M.K.3    Kostas, S.A.4    Driver, S.E.5    Mello, C.C.6
  • 13
    • 0023841089 scopus 로고
    • Circulating DNA and lupus nephritis
    • Fournie G.J. Circulating DNA and lupus nephritis. Kidney Int. 33:1988;487-497.
    • (1988) Kidney Int. , vol.33 , pp. 487-497
    • Fournie, G.J.1
  • 17
    • 0028281443 scopus 로고
    • The characterization of a mammalian DNA structure-specific endonuclease
    • Harrington J.J., Lieber M.R. The characterization of a mammalian DNA structure-specific endonuclease. EMBO J. 13:1994;1235-1246.
    • (1994) EMBO J. , vol.13 , pp. 1235-1246
    • Harrington, J.J.1    Lieber, M.R.2
  • 18
    • 0035849895 scopus 로고    scopus 로고
    • Engulfment genes cooperate with ced-3 to promote cell death in Caenorhabditis elegans
    • Hoeppner D.J., Hengartner M.O., Schnabel R. Engulfment genes cooperate with ced-3 to promote cell death in Caenorhabditis elegans. Nature. 412:2001;202-206.
    • (2001) Nature , vol.412 , pp. 202-206
    • Hoeppner, D.J.1    Hengartner, M.O.2    Schnabel, R.3
  • 20
    • 0027318640 scopus 로고
    • RNase T shares conserved sequence motifs with DNA proofreading exonucleases
    • Koonin E.V., Deutscher M.P. RNase T shares conserved sequence motifs with DNA proofreading exonucleases. Nucleic Acids Res. 21:1993;2521-2522.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 2521-2522
    • Koonin, E.V.1    Deutscher, M.P.2
  • 21
    • 0035811496 scopus 로고    scopus 로고
    • Endonuclease G is an apoptotic DNase when released from mitochondria
    • Li L.Y., Luo X., Wang X. Endonuclease G is an apoptotic DNase when released from mitochondria. Nature. 412:2001;95-99.
    • (2001) Nature , vol.412 , pp. 95-99
    • Li, L.Y.1    Luo, X.2    Wang, X.3
  • 22
    • 0031104841 scopus 로고    scopus 로고
    • The FEN-1 family of structure-specific nucleases in eukaryotic DNA replication, recombination and repair
    • Lieber M.R. The FEN-1 family of structure-specific nucleases in eukaryotic DNA replication, recombination and repair. Bioessays. 19:1997;233-240.
    • (1997) Bioessays , vol.19 , pp. 233-240
    • Lieber, M.R.1
  • 23
    • 0030581151 scopus 로고    scopus 로고
    • Induction of apoptotic program in cell-free extracts: Requirement for dATP and cytochrome c
    • Liu X., Kim C.N., Yang J., Jemmerson R., Wang X. Induction of apoptotic program in cell-free extracts. requirement for dATP and cytochrome c Cell. 86:1996;147-157.
    • (1996) Cell , vol.86 , pp. 147-157
    • Liu, X.1    Kim, C.N.2    Yang, J.3    Jemmerson, R.4    Wang, X.5
  • 24
    • 0030916417 scopus 로고    scopus 로고
    • DFF, a heterodimeric protein that functions downstream of caspase-3 to trigger DNA fragmentation during apoptosis
    • Liu X., Zou H., Slaughter C., Wang X. DFF, a heterodimeric protein that functions downstream of caspase-3 to trigger DNA fragmentation during apoptosis. Cell. 89:1997;175-184.
    • (1997) Cell , vol.89 , pp. 175-184
    • Liu, X.1    Zou, H.2    Slaughter, C.3    Wang, X.4
  • 25
    • 0032555215 scopus 로고    scopus 로고
    • The 40-kDa subunit of DNA fragmentation factor induces DNA fragmentation and chromatin condensation during apoptosis
    • Liu X., Li P., Widlak P., Zou H., Luo X., Garrard W.T., Wang X. The 40-kDa subunit of DNA fragmentation factor induces DNA fragmentation and chromatin condensation during apoptosis. Proc. Natl. Acad. Sci. USA. 95:1998;8461-8466.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 8461-8466
    • Liu, X.1    Li, P.2    Widlak, P.3    Zou, H.4    Luo, X.5    Garrard, W.T.6    Wang, X.7
  • 28
    • 0030972976 scopus 로고    scopus 로고
    • Native recombinant cyclophilins A, B, and C degrade DNA independently of peptidylprolyl cis-trans-isomerase activity. Potential roles of cyclophilins in apoptosis
    • Montague J.W., Hughes F.M. Jr., Cidlowski J.A. Native recombinant cyclophilins A, B, and C degrade DNA independently of peptidylprolyl cis-trans-isomerase activity. Potential roles of cyclophilins in apoptosis. J. Biol. Chem. 272:1997;6677-6684.
    • (1997) J. Biol. Chem. , vol.272 , pp. 6677-6684
    • Montague, J.W.1    Hughes F.M., Jr.2    Cidlowski, J.A.3
  • 30
    • 0035811511 scopus 로고    scopus 로고
    • Mitochondrial endonuclease G is important for apoptosis in C. elegans
    • Parrish J., Li L., Klotz K., Ledwich D., Wang X., Xue D. Mitochondrial endonuclease G is important for apoptosis in C. elegans. Nature. 412:2001;90-94.
    • (2001) Nature , vol.412 , pp. 90-94
    • Parrish, J.1    Li, L.2    Klotz, K.3    Ledwich, D.4    Wang, X.5    Xue, D.6
  • 31
    • 0036008652 scopus 로고    scopus 로고
    • The 3′ end formation in small RNAs
    • Perumal K., Reddy R. The 3′ end formation in small RNAs. Gene Expr. 10:2002;59-78.
    • (2002) Gene Expr. , vol.10 , pp. 59-78
    • Perumal, K.1    Reddy, R.2
  • 32
    • 0032169220 scopus 로고    scopus 로고
    • Recognizing death: The phagocytosis of apoptotic cells
    • Platt N., da Silva R.P., Gordon S. Recognizing death. the phagocytosis of apoptotic cells Trends Cell Biol. 8:1998;365-372.
    • (1998) Trends Cell Biol. , vol.8 , pp. 365-372
    • Platt, N.1    Da Silva, R.P.2    Gordon, S.3
  • 33
    • 0035849886 scopus 로고    scopus 로고
    • Phagocytosis promotes programmed cell death in C. elegans
    • Reddien P.W., Cameron S., Horvitz H.R. Phagocytosis promotes programmed cell death in C. elegans. Nature. 412:2001;198-202.
    • (2001) Nature , vol.412 , pp. 198-202
    • Reddien, P.W.1    Cameron, S.2    Horvitz, H.R.3
  • 34
    • 0030782177 scopus 로고    scopus 로고
    • Cytochrome c: Can't live with it - Can't live without it
    • Reed J.C. Cytochrome c. can't live with it - can't live without it Cell. 91:1997;559-562.
    • (1997) Cell , vol.91 , pp. 559-562
    • Reed, J.C.1
  • 35
    • 0004282618 scopus 로고    scopus 로고
    • D.L. Riddle, T. Blumenthal, B.J. Meyer, & J.R. Priess. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory
    • Riddle D.L., Blumenthal T., Meyer B.J., Priess J.R. C. elegans II. 1997;Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
    • (1997) C. elegans II
  • 36
    • 0035976991 scopus 로고    scopus 로고
    • CAD/DFF40 nuclease is dispensable for high molecular weight DNA cleavage and stage I chromatin condensation in apoptosis
    • Samejima K., Tone S., Earnshaw W.C. CAD/DFF40 nuclease is dispensable for high molecular weight DNA cleavage and stage I chromatin condensation in apoptosis. J. Biol. Chem. 276:2001;45427-45432.
    • (2001) J. Biol. Chem. , vol.276 , pp. 45427-45432
    • Samejima, K.1    Tone, S.2    Earnshaw, W.C.3
  • 37
    • 0030925920 scopus 로고    scopus 로고
    • Pfam: A comprehensive database of protein domain families based on seed alignments
    • Sonnhammer E.L., Eddy S.R., Durbin R. Pfam. a comprehensive database of protein domain families based on seed alignments Proteins. 28:1997;405-420.
    • (1997) Proteins , vol.28 , pp. 405-420
    • Sonnhammer, E.L.1    Eddy, S.R.2    Durbin, R.3
  • 38
    • 0028929328 scopus 로고
    • Mechanisms and genes of cellular suicide
    • Steller H. Mechanisms and genes of cellular suicide. Science. 267:1995;1445-1449.
    • (1995) Science , vol.267 , pp. 1445-1449
    • Steller, H.1
  • 39
    • 0024950520 scopus 로고
    • The origin and pathogenic role of anti-DNA autoantibodies
    • Stollar B.D. The origin and pathogenic role of anti-DNA autoantibodies. Curr. Opin. Immunol. 2:1989;607-612.
    • (1989) Curr. Opin. Immunol. , vol.2 , pp. 607-612
    • Stollar, B.D.1
  • 40
    • 0017303612 scopus 로고
    • Post-embryonic development in the ventral cord of Caenorhabditis elegans
    • Sulston J.E. Post-embryonic development in the ventral cord of Caenorhabditis elegans. Philos. Trans. R. Soc. Lond. B Biol. Sci. 275:1976;287-297.
    • (1976) Philos. Trans. R. Soc. Lond. B Biol. Sci. , vol.275 , pp. 287-297
    • Sulston, J.E.1
  • 41
    • 0020858899 scopus 로고
    • The embryonic cell lineage of the nematode Caenorhabditis elegans
    • Sulston J.E., Schierenberg E., White J.G., Thomson J.N. The embryonic cell lineage of the nematode Caenorhabditis elegans. Dev. Biol. 100:1983;64-119.
    • (1983) Dev. Biol. , vol.100 , pp. 64-119
    • Sulston, J.E.1    Schierenberg, E.2    White, J.G.3    Thomson, J.N.4
  • 43
    • 0030830158 scopus 로고    scopus 로고
    • Development of pathogenic anti-DNA antibodies in patients with systemic lupus erythematosus
    • Suzuki N., Mihara S., Sakane T. Development of pathogenic anti-DNA antibodies in patients with systemic lupus erythematosus. FASEB J. 11:1997;1033-1038.
    • (1997) FASEB J. , vol.11 , pp. 1033-1038
    • Suzuki, N.1    Mihara, S.2    Sakane, T.3
  • 44
    • 0033593572 scopus 로고    scopus 로고
    • Cell death in development
    • Vaux D.L., Korsmeyer S.J. Cell death in development. Cell. 96:1999;245-254.
    • (1999) Cell , vol.96 , pp. 245-254
    • Vaux, D.L.1    Korsmeyer, S.J.2
  • 46
    • 0034041159 scopus 로고    scopus 로고
    • Lupus, DNase and defective disposal of cellular debris
    • Walport M.J. Lupus, DNase and defective disposal of cellular debris. Nat. Genet. 25:2000;135-136.
    • (2000) Nat. Genet. , vol.25 , pp. 135-136
    • Walport, M.J.1
  • 47
    • 0037159784 scopus 로고    scopus 로고
    • Mechanisms of AIF-mediated apoptotic DNA degradation in Caenorhabditis elegans
    • Wang X., Yang C., Chai J., Shi Y., Xue D. Mechanisms of AIF-mediated apoptotic DNA degradation in Caenorhabditis elegans. Science. 298:2002;1587-1592.
    • (2002) Science , vol.298 , pp. 1587-1592
    • Wang, X.1    Yang, C.2    Chai, J.3    Shi, Y.4    Xue, D.5
  • 48
    • 0034595796 scopus 로고    scopus 로고
    • TatD is a cytoplasmic protein with DNase activity. No requirement for TatD family proteins in sec-independent protein export
    • Wexler M., Sargent F., Jack R.L., Stanley N.R., Bogsch E.G., Robinson C., Berks B.C., Palmer T. TatD is a cytoplasmic protein with DNase activity. No requirement for TatD family proteins in sec-independent protein export. J. Biol. Chem. 275:2000;16717-16722.
    • (2000) J. Biol. Chem. , vol.275 , pp. 16717-16722
    • Wexler, M.1    Sargent, F.2    Jack, R.L.3    Stanley, N.R.4    Bogsch, E.G.5    Robinson, C.6    Berks, B.C.7    Palmer, T.8
  • 49
    • 0034162713 scopus 로고    scopus 로고
    • NUC-1, a Caenorhabditis elegans DNase II homolog, functions in an intermediate step of DNA degradation during apoptosis
    • Wu Y.C., Stanfield G.M., Horvitz H.R. NUC-1, a Caenorhabditis elegans DNase II homolog, functions in an intermediate step of DNA degradation during apoptosis. Genes Dev. 14:2000;536-548.
    • (2000) Genes Dev. , vol.14 , pp. 536-548
    • Wu, Y.C.1    Stanfield, G.M.2    Horvitz, H.R.3
  • 50
    • 0018830636 scopus 로고
    • Glucocorticoid-induced thymocyte apoptosis is associated with endogenous endonuclease activation
    • Wyllie A.H. Glucocorticoid-induced thymocyte apoptosis is associated with endogenous endonuclease activation. Nature. 284:1980;555-556.
    • (1980) Nature , vol.284 , pp. 555-556
    • Wyllie, A.H.1
  • 51
    • 0036469777 scopus 로고    scopus 로고
    • Apoptotic DNA fragmentation and tissue homeostasis
    • Zhang J., Xu M. Apoptotic DNA fragmentation and tissue homeostasis. Trends Cell Biol. 12:2002;84-89.
    • (2002) Trends Cell Biol. , vol.12 , pp. 84-89
    • Zhang, J.1    Xu, M.2
  • 52
    • 0032514713 scopus 로고    scopus 로고
    • Resistance to DNA fragmentation and chromatin condensation in mice lacking the DNA fragmentation factor 45
    • Zhang J., Liu X., Scherer D.C., van Kaer L., Wang X., Xu M. Resistance to DNA fragmentation and chromatin condensation in mice lacking the DNA fragmentation factor 45. Proc. Natl. Acad. Sci. USA. 95:1998;12480-12485.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 12480-12485
    • Zhang, J.1    Liu, X.2    Scherer, D.C.3    Van Kaer, L.4    Wang, X.5    Xu, M.6
  • 53
    • 0037068447 scopus 로고    scopus 로고
    • Comprehensive proteomic analysis of the human spliceosome
    • Zhou Z., Licklider L.J., Gygi S.P., Reed R. Comprehensive proteomic analysis of the human spliceosome. Nature. 419:2002;182-185.
    • (2002) Nature , vol.419 , pp. 182-185
    • Zhou, Z.1    Licklider, L.J.2    Gygi, S.P.3    Reed, R.4
  • 54
    • 0030745646 scopus 로고    scopus 로고
    • Apaf-1, a human protein homologous to C. elegans CED-4, participates in cytochrome c-dependent activation of caspase-3
    • Zou H., Henzel W.J., Liu X., Lutschg A., Wang X. Apaf-1, a human protein homologous to C. elegans CED-4, participates in cytochrome c-dependent activation of caspase-3. Cell. 90:1997;405-413.
    • (1997) Cell , vol.90 , pp. 405-413
    • Zou, H.1    Henzel, W.J.2    Liu, X.3    Lutschg, A.4    Wang, X.5
  • 55
    • 0033596980 scopus 로고    scopus 로고
    • An APAF-1.Cytochrome c multimeric complex is a functional apoptosome that activates procaspase-9
    • Zou H., Li Y., Liu X., Wang X. An APAF-1.Cytochrome c multimeric complex is a functional apoptosome that activates procaspase-9. J. Biol. Chem. 274:1999;11549-11556.
    • (1999) J. Biol. Chem. , vol.274 , pp. 11549-11556
    • Zou, H.1    Li, Y.2    Liu, X.3    Wang, X.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.