-
1
-
-
84928434625
-
Towards the automatic classification of neurons
-
Armananzas R, Ascoli GA (2015) Towards the automatic classification of neurons. Trends Neurosci 38(5):307-318.
-
(2015)
Trends Neurosci
, vol.38
, Issue.5
, pp. 307-318
-
-
Armananzas, R.1
Ascoli, G.A.2
-
2
-
-
45749115353
-
Petilla terminology: nomenclature of features of GABAergic interneurons of the cerebral cortex
-
Ascoli GA et al (2008) Petilla terminology: nomenclature of features of GABAergic interneurons of the cerebral cortex. Nat Rev Neurosci 9(7):557-568.
-
(2008)
Nat Rev Neurosci
, vol.9
, Issue.7
, pp. 557-568
-
-
Ascoli, G.A.1
-
3
-
-
80051898233
-
A transcriptomic atlas of mouse neocortical layers
-
Belgard TG et al (2011) A transcriptomic atlas of mouse neocortical layers. Neuron 71(4):605-616.
-
(2011)
Neuron
, vol.71
, Issue.4
, pp. 605-616
-
-
Belgard, T.G.1
-
4
-
-
84899574465
-
Single-cell trajectory detection uncovers progression and regulatory coordination in human B cell development
-
Bendall SC et al (2014) Single-cell trajectory detection uncovers progression and regulatory coordination in human B cell development. Cell 157(3):714-725.
-
(2014)
Cell
, vol.157
, Issue.3
, pp. 714-725
-
-
Bendall, S.C.1
-
5
-
-
84887109584
-
Accounting for technical noise in single-cell RNA-seq experiments
-
Brennecke P et al (2013) Accounting for technical noise in single-cell RNA-seq experiments. Nat Methods 10(11):1093-1095.
-
(2013)
Nat Methods
, vol.10
, Issue.11
, pp. 1093-1095
-
-
Brennecke, P.1
-
6
-
-
84957569471
-
Electrophysiological, transcriptomic and morphologic profiling of single neurons using patch-seq
-
Cadwell CR et al (2016) Electrophysiological, transcriptomic and morphologic profiling of single neurons using patch-seq. Nat Biotechnol 34(2):199-203.
-
(2016)
Nat Biotechnol
, vol.34
, Issue.2
, pp. 199-203
-
-
Cadwell, C.R.1
-
7
-
-
84952674076
-
Human cerebral organoids recapitulate gene expression programs of fetal neocortex development
-
Camp JG et al (2015) Human cerebral organoids recapitulate gene expression programs of fetal neocortex development. Proc Natl Acad Sci U S A 112(51):15672-15677.
-
(2015)
Proc Natl Acad Sci U S A
, vol.112
, Issue.51
, pp. 15672-15677
-
-
Camp, J.G.1
-
8
-
-
84964426047
-
Hipposeq: a comprehensive RNA-seq database of gene expression in hippocampal principal neurons
-
Cembrowski MS et al (2016) Hipposeq: a comprehensive RNA-seq database of gene expression in hippocampal principal neurons. Elife 5:e14997.
-
(2016)
Elife
, vol.5
-
-
Cembrowski, M.S.1
-
9
-
-
84928395184
-
RNA imaging Spatially resolved, highly multiplexed RNA profiling in single cells
-
Chen KH et al (2015) RNA imaging. Spatially resolved, highly multiplexed RNA profiling in single cells. Science 348(6233):aaa6090.
-
(2015)
Science
, vol.348
, Issue.6233
-
-
Chen, K.H.1
-
10
-
-
84979258664
-
Transcriptional profiling at whole population and single cell levels reveals somatosensory neuron molecular diversity
-
Chiu IM et al (2014) Transcriptional profiling at whole population and single cell levels reveals somatosensory neuron molecular diversity. eLife, vol 3.
-
(2014)
eLife
, vol.3
-
-
Chiu, I.M.1
-
11
-
-
27144548491
-
The external RNA controls consortium: a progress report
-
Consortium T.E.R.C. (2005) The external RNA controls consortium: a progress report. Nat Meth 2(10):731-734.
-
(2005)
Nat Meth
, vol.2
, Issue.10
, pp. 731-734
-
-
Consortium, T.E.R.C.1
-
12
-
-
84931274624
-
A survey of human brain transcriptome diversity at the single cell level
-
Darmanis S et al (2015) A survey of human brain transcriptome diversity at the single cell level. Proc Natl Acad Sci U S A 112(23):7285-7290.
-
(2015)
Proc Natl Acad Sci U S A
, vol.112
, Issue.23
, pp. 7285-7290
-
-
Darmanis, S.1
-
13
-
-
84875424532
-
New insights into the classification and nomenclature of cortical GABAergic interneurons
-
DeFelipe J et al (2013) New insights into the classification and nomenclature of cortical GABAergic interneurons. Nat Rev Neurosci 14(3):202-216.
-
(2013)
Nat Rev Neurosci
, vol.14
, Issue.3
, pp. 202-216
-
-
DeFelipe, J.1
-
14
-
-
55449103144
-
Application of a translational profiling approach for the comparative analysis of CNS cell types
-
19013282
-
Doyle JP et al (2008) Application of a translational profiling approach for the comparative analysis of CNS cell types. Cell 135(19013282):749-762.
-
(2008)
Cell
, vol.135
, pp. 749-762
-
-
Doyle, J.P.1
-
15
-
-
0026588147
-
Analysis of gene expression in single live neurons
-
Eberwine J et al (1992) Analysis of gene expression in single live neurons. Proc Natl Acad Sci 89(7):3010-3014.
-
(1992)
Proc Natl Acad Sci
, vol.89
, Issue.7
, pp. 3010-3014
-
-
Eberwine, J.1
-
16
-
-
84928704517
-
Human-specific gene ARHGAP11B promotes basal progenitor amplification and neocortex expansion
-
Florio M et al (2015) Human-specific gene ARHGAP11B promotes basal progenitor amplification and neocortex expansion. Science 347(6229):1465-1470.
-
(2015)
Science
, vol.347
, Issue.6229
, pp. 1465-1470
-
-
Florio, M.1
-
17
-
-
84984706622
-
Single-cell RNAseq reveals cell adhesion molecule profiles in electrophysiologically defined neurons
-
Foldy C et al (2016) Single-cell RNAseq reveals cell adhesion molecule profiles in electrophysiologically defined neurons. Proc Natl Acad Sci U S A 113(35):E5222-E5231.
-
(2016)
Proc Natl Acad Sci U S A
, vol.113
, Issue.35
-
-
Foldy, C.1
-
18
-
-
84984633155
-
Visceral motor neuron diversity delineates a cellular basis for nipple- and pilo-erection muscle control
-
Furlan A et al (2016) Visceral motor neuron diversity delineates a cellular basis for nipple- and pilo-erection muscle control. Nat Neurosci 19(10):1331-1340.
-
(2016)
Nat Neurosci
, vol.19
, Issue.10
, pp. 1331-1340
-
-
Furlan, A.1
-
19
-
-
84961381731
-
Integration of electrophysiological recordings with single-cell RNA-seq data identifies neuronal subtypes
-
Fuzik J et al (2015) Integration of electrophysiological recordings with single-cell RNA-seq data identifies neuronal subtypes. Nat Biotechnol.
-
(2015)
Nat Biotechnol
-
-
Fuzik, J.1
-
21
-
-
84984920747
-
Robust lineage reconstruction from high-dimensional single-cell data
-
Giecold G et al (2016) Robust lineage reconstruction from high-dimensional single-cell data. Nucl Acids Res 44(14):e122.
-
(2016)
Nucl Acids Res
, vol.44
, Issue.14
-
-
Giecold, G.1
-
22
-
-
84978879999
-
Cellular taxonomy of the mouse striatum as revealed by single-cell RNA-Seq
-
Gokce O et al (2016) Cellular taxonomy of the mouse striatum as revealed by single-cell RNA-Seq. Cell Rep 16(4):1126-1137.
-
(2016)
Cell Rep
, vol.16
, Issue.4
, pp. 1126-1137
-
-
Gokce, O.1
-
23
-
-
84946226911
-
Design and analysis of single-cell sequencing experiments
-
Grun D, van Oudenaarden A (2015) Design and analysis of single-cell sequencing experiments. Cell 163(4):799-810.
-
(2015)
Cell
, vol.163
, Issue.4
, pp. 799-810
-
-
Grun, D.1
van Oudenaarden, A.2
-
24
-
-
84901831004
-
Validation of noise models for single-cell transcriptomics
-
Grun D, Kester L, van Oudenaarden A (2014) Validation of noise models for single-cell transcriptomics. Nat Methods 11(6):637-640.
-
(2014)
Nat Methods
, vol.11
, Issue.6
, pp. 637-640
-
-
Grun, D.1
Kester, L.2
van Oudenaarden, A.3
-
25
-
-
84980325679
-
Div-seq: single-nucleus RNA-seq reveals dynamics of rare adult newborn neurons
-
Habib N et al (2016) Div-seq: single-nucleus RNA-seq reveals dynamics of rare adult newborn neurons. Science 353(6302):925-928.
-
(2016)
Science
, vol.353
, Issue.6302
, pp. 925-928
-
-
Habib, N.1
-
26
-
-
84949035291
-
Single-cell transcriptomics reveals receptor transformations during olfactory neurogenesis
-
Hanchate NK et al (2015) Single-cell transcriptomics reveals receptor transformations during olfactory neurogenesis. Science 350(6265):1251-1255.
-
(2015)
Science
, vol.350
, Issue.6265
, pp. 1251-1255
-
-
Hanchate, N.K.1
-
27
-
-
84904252146
-
Anatomical characterization of Cre driver mice for neural circuit mapping and manipulation
-
Harris JA et al (2014) Anatomical characterization of Cre driver mice for neural circuit mapping and manipulation. Front Neural Circuits 8:76.
-
(2014)
Front Neural Circuits
, vol.8
, pp. 76
-
-
Harris, J.A.1
-
28
-
-
84866953427
-
CEL-seq: single-cell RNA-seq by multiplexed linear amplification
-
Hashimshony T et al (2012) CEL-seq: single-cell RNA-seq by multiplexed linear amplification. Cell Rep 2(3):666-673.
-
(2012)
Cell Rep
, vol.2
, Issue.3
, pp. 666-673
-
-
Hashimshony, T.1
-
29
-
-
85055630296
-
Strategies and tools for combinatorial targeting of GABAergic neurons in mouse cerebral cortex
-
He M et al (2016) Strategies and tools for combinatorial targeting of GABAergic neurons in mouse cerebral cortex. Neuron 92(2):555.
-
(2016)
Neuron
, vol.92
, Issue.2
, pp. 555
-
-
He, M.1
-
30
-
-
55449107738
-
A translational profiling approach for the molecular characterization of CNS cell types
-
19013281
-
Heiman M et al (2008) A translational profiling approach for the molecular characterization of CNS cell types. Cell 135(19013281):738-748.
-
(2008)
Cell
, vol.135
, pp. 738-748
-
-
Heiman, M.1
-
31
-
-
39149103759
-
A manual method for the purification of fluorescently labeled neurons from the mammalian brain
-
Hempel CM, Sugino K, Nelson SB (2007) A manual method for the purification of fluorescently labeled neurons from the mammalian brain. Nat Protoc 2(11):2924-2929.
-
(2007)
Nat Protoc
, vol.2
, Issue.11
, pp. 2924-2929
-
-
Hempel, C.M.1
Sugino, K.2
Nelson, S.B.3
-
32
-
-
79959403670
-
Characterization of the single-cell transcriptional landscape by highly multiplex RNA-seq
-
Islam S et al (2011) Characterization of the single-cell transcriptional landscape by highly multiplex RNA-seq. Genome Res 21(7):1160-1167.
-
(2011)
Genome Res
, vol.21
, Issue.7
, pp. 1160-1167
-
-
Islam, S.1
-
33
-
-
84895069488
-
Quantitative single-cell RNA-seq with unique molecular identifiers
-
Islam S et al (2014) Quantitative single-cell RNA-seq with unique molecular identifiers. Nat Methods 11(2):163-166.
-
(2014)
Nat Methods
, vol.11
, Issue.2
, pp. 163-166
-
-
Islam, S.1
-
34
-
-
84893905629
-
Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types
-
Jaitin DA et al (2014) Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types. Science 343(6172):776-779.
-
(2014)
Science
, vol.343
, Issue.6172
, pp. 776-779
-
-
Jaitin, D.A.1
-
35
-
-
84982806105
-
TSCAN: pseudo-time reconstruction and evaluation in single-cell RNA-seq analysis
-
Ji Z, Ji H (2016) TSCAN: pseudo-time reconstruction and evaluation in single-cell RNA-seq analysis. Nucl Acids Res 44(13):e117.
-
(2016)
Nucl Acids Res
, vol.44
, Issue.13
-
-
Ji, Z.1
Ji, H.2
-
36
-
-
84928706022
-
Single-cell analysis reveals transcriptional heterogeneity of neural progenitors in human cortex
-
Johnson MB et al (2015) Single-cell analysis reveals transcriptional heterogeneity of neural progenitors in human cortex. Nat Neurosci 18(5):637-646.
-
(2015)
Nat Neurosci
, vol.18
, Issue.5
, pp. 637-646
-
-
Johnson, M.B.1
-
37
-
-
84929663446
-
Single-cell transcriptomics enters the age of mass production
-
Junker JP, van Oudenaarden A (2015) Single-cell transcriptomics enters the age of mass production. Mol Cell 58(4):563-564.
-
(2015)
Mol Cell
, vol.58
, Issue.4
, pp. 563-564
-
-
Junker, J.P.1
van Oudenaarden, A.2
-
38
-
-
84995460736
-
High-throughput mapping of single-neuron projections by sequencing of barcoded RNA
-
Kebschull JM et al (2016) High-throughput mapping of single-neuron projections by sequencing of barcoded RNA. Neuron 91(5):975-987.
-
(2016)
Neuron
, vol.91
, Issue.5
, pp. 975-987
-
-
Kebschull, J.M.1
-
39
-
-
85006080817
-
Single-cell analysis reveals a close relationship between differentiating dopamine and subthalamic nucleus neuronal lineages
-
Kee N et al (2017) Single-cell analysis reveals a close relationship between differentiating dopamine and subthalamic nucleus neuronal lineages. Cell Stem Cell.
-
(2017)
Cell Stem Cell
-
-
Kee, N.1
-
40
-
-
84995653443
-
Predictive markers guide differentiation to improve graft outcome in clinical translation of hESC-based therapy for Parkinson's disease
-
Kirkeby A et al (2017) Predictive markers guide differentiation to improve graft outcome in clinical translation of hESC-based therapy for Parkinson's disease. Cell Stem Cell.
-
(2017)
Cell Stem Cell
-
-
Kirkeby, A.1
-
41
-
-
84856484968
-
Counting absolute numbers of molecules using unique molecular identifiers
-
Kivioja T et al (2012) Counting absolute numbers of molecules using unique molecular identifiers. Nat Methods 9(1):72-74.
-
(2012)
Nat Methods
, vol.9
, Issue.1
, pp. 72-74
-
-
Kivioja, T.1
-
42
-
-
84929684998
-
Droplet barcoding for single-cell transcriptomics applied to embryonic stem cells
-
Klein AM et al (2015) Droplet barcoding for single-cell transcriptomics applied to embryonic stem cells. Cell 161(5):1187-1201.
-
(2015)
Cell
, vol.161
, Issue.5
, pp. 1187-1201
-
-
Klein, A.M.1
-
43
-
-
84929687805
-
The technology and biology of single-cell RNA sequencing
-
Kolodziejczyk AA et al (2015) The technology and biology of single-cell RNA sequencing. Mol Cell 58(4):610-620.
-
(2015)
Mol Cell
, vol.58
, Issue.4
, pp. 610-620
-
-
Kolodziejczyk, A.A.1
-
44
-
-
84959361379
-
Using single nuclei for RNA-seq to capture the transcriptome of postmortem neurons
-
Krishnaswami SR et al (2016) Using single nuclei for RNA-seq to capture the transcriptome of postmortem neurons. Nat Protoc 11(3):499-524.
-
(2016)
Nat Protoc
, vol.11
, Issue.3
, pp. 499-524
-
-
Krishnaswami, S.R.1
-
45
-
-
84990876505
-
Molecular diversity of midbrain development in mouse, human, and stem cells
-
La Manno G et al (2016) Molecular diversity of midbrain development in mouse, human, and stem cells. Cell 167(2):566-580.e19.
-
(2016)
Cell
, vol.167
, Issue.2
, pp. 566-580
-
-
La Manno, G.1
-
46
-
-
84976276942
-
Neuronal subtypes and diversity revealed by single-nucleus RNA sequencing of the human brain
-
Lake BB et al (2016) Neuronal subtypes and diversity revealed by single-nucleus RNA sequencing of the human brain. Science 352(6293):1586-1590.
-
(2016)
Science
, vol.352
, Issue.6293
, pp. 1586-1590
-
-
Lake, B.B.1
-
47
-
-
84904396621
-
Organogenesis in a dish: modeling development and disease using organoid technologies
-
Lancaster MA, Knoblich JA (2014) Organogenesis in a dish: modeling development and disease using organoid technologies. Science 345(6194):1247125.
-
(2014)
Science
, vol.345
, Issue.6194
, pp. 1247125
-
-
Lancaster, M.A.1
Knoblich, J.A.2
-
48
-
-
84897090228
-
Highly multiplexed subcellular RNA sequencing in situ
-
Lee JH et al (2014) Highly multiplexed subcellular RNA sequencing in situ. Science 343(6177):1360-1363.
-
(2014)
Science
, vol.343
, Issue.6177
, pp. 1360-1363
-
-
Lee, J.H.1
-
49
-
-
33846252240
-
Genome-wide atlas of gene expression in the adult mouse brain
-
Lein ES et al (2007) Genome-wide atlas of gene expression in the adult mouse brain. Nature 445(7124):168-176.
-
(2007)
Nature
, vol.445
, Issue.7124
, pp. 168-176
-
-
Lein, E.S.1
-
50
-
-
84953362048
-
Somatosensory neuron types identified by high-coverage single-cell RNA-sequencing and functional heterogeneity
-
Li C-L et al (2016) Somatosensory neuron types identified by high-coverage single-cell RNA-sequencing and functional heterogeneity. Cell Res 26(1):83-102.
-
(2016)
Cell Res
, vol.26
, Issue.1
, pp. 83-102
-
-
Li, C.-L.1
-
51
-
-
84884591898
-
Tracing inputs to inhibitory or excitatory neurons of mouse and cat visual cortex with a targeted rabies virus
-
Liu Y-J et al (2013) Tracing inputs to inhibitory or excitatory neurons of mouse and cat visual cortex with a targeted rabies virus. Curr Biol 23(18):1746-1755.
-
(2013)
Curr Biol
, vol.23
, Issue.18
, pp. 1746-1755
-
-
Liu, Y.-J.1
-
52
-
-
84895071445
-
Transcriptome in vivo analysis (TIVA) of spatially defined single cells in live tissue
-
Lovatt D et al (2014) Transcriptome in vivo analysis (TIVA) of spatially defined single cells in live tissue. Nat Methods 11(2):190-196.
-
(2014)
Nat Methods
, vol.11
, Issue.2
, pp. 190-196
-
-
Lovatt, D.1
-
53
-
-
84897452794
-
Single-cell in situ RNA profiling by sequential hybridization
-
Lubeck E et al (2014) Single-cell in situ RNA profiling by sequential hybridization. Nat Methods 11(4):360-361.
-
(2014)
Nat Methods
, vol.11
, Issue.4
, pp. 360-361
-
-
Lubeck, E.1
-
54
-
-
79959924122
-
Development and evolution of the human neocortex
-
Lui JH, Hansen DV, Kriegstein AR (2011) Development and evolution of the human neocortex. Cell 146(1):18-36.
-
(2011)
Cell
, vol.146
, Issue.1
, pp. 18-36
-
-
Lui, J.H.1
Hansen, D.V.2
Kriegstein, A.R.3
-
55
-
-
84929684999
-
Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets
-
Macosko EZ et al (2015) Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets. Cell 161(5):1202-1214.
-
(2015)
Cell
, vol.161
, Issue.5
, pp. 1202-1214
-
-
Macosko, E.Z.1
-
56
-
-
84860294289
-
A toolbox of Cre-dependent optogenetic transgenic mice for light-induced activation and silencing
-
Madisen L et al (2012) A toolbox of Cre-dependent optogenetic transgenic mice for light-induced activation and silencing. Nat Neurosci 15(5):793-802.
-
(2012)
Nat Neurosci
, vol.15
, Issue.5
, pp. 793-802
-
-
Madisen, L.1
-
57
-
-
84924253852
-
Transgenic mice for intersectional targeting of neural sensors and effectors with high specificity and performance
-
Madisen L et al (2015) Transgenic mice for intersectional targeting of neural sensors and effectors with high specificity and performance. Neuron 85(5):942-958.
-
(2015)
Neuron
, vol.85
, Issue.5
, pp. 942-958
-
-
Madisen, L.1
-
58
-
-
84975165639
-
Oligodendrocyte heterogeneity in the mouse juvenile and adult central nervous system
-
Marques S et al (2016) Oligodendrocyte heterogeneity in the mouse juvenile and adult central nervous system. Science 352(6291):1326-1329.
-
(2016)
Science
, vol.352
, Issue.6291
, pp. 1326-1329
-
-
Marques, S.1
-
59
-
-
84976883162
-
Microglia development follows a stepwise program to regulate brain homeostasis
-
Matcovitch-Natan O et al (2016) Microglia development follows a stepwise program to regulate brain homeostasis. Science 353(6301):aad8670.
-
(2016)
Science
, vol.353
, Issue.6301
-
-
Matcovitch-Natan, O.1
-
60
-
-
84900303453
-
Transcriptional landscape of the prenatal human brain
-
Miller JA et al (2014) Transcriptional landscape of the prenatal human brain. Nature 508(7495):199-206.
-
(2014)
Nature
, vol.508
, Issue.7495
, pp. 199-206
-
-
Miller, J.A.1
-
61
-
-
84953706727
-
Multi-scale molecular deconstruction of the serotonin neuron system
-
Okaty BW et al (2015) Multi-scale molecular deconstruction of the serotonin neuron system. Neuron 88(4):774-791.
-
(2015)
Neuron
, vol.88
, Issue.4
, pp. 774-791
-
-
Okaty, B.W.1
-
62
-
-
84950290139
-
Transcriptional heterogeneity and lineage commitment in myeloid progenitors
-
Paul F et al (2015) Transcriptional heterogeneity and lineage commitment in myeloid progenitors. Cell 163(7):1663-1677.
-
(2015)
Cell
, vol.163
, Issue.7
, pp. 1663-1677
-
-
Paul, F.1
-
63
-
-
84887101406
-
Smart-seq2 for sensitive full-length transcriptome profiling in single cells
-
Picelli S et al (2013) Smart-seq2 for sensitive full-length transcriptome profiling in single cells. Nat Methods 10(11):1096-1098.
-
(2013)
Nat Methods
, vol.10
, Issue.11
, pp. 1096-1098
-
-
Picelli, S.1
-
64
-
-
84922321862
-
Low-coverage single-cell mRNA sequencing reveals cellular heterogeneity and activated signaling pathways in developing cerebral cortex
-
Pollen AA et al (2014) Low-coverage single-cell mRNA sequencing reveals cellular heterogeneity and activated signaling pathways in developing cerebral cortex. Nat Biotechnol 32(10):1053-1058.
-
(2014)
Nat Biotechnol
, vol.32
, Issue.10
, pp. 1053-1058
-
-
Pollen, A.A.1
-
65
-
-
84948457494
-
Molecular identity of human outer radial glia during cortical development
-
Pollen AA et al (2015) Molecular identity of human outer radial glia during cortical development. Cell 163(1):55-67.
-
(2015)
Cell
, vol.163
, Issue.1
, pp. 55-67
-
-
Pollen, A.A.1
-
66
-
-
84908436879
-
Defining midbrain dopaminergic neuron diversity by single-cell gene expression profiling
-
Poulin JF et al (2014) Defining midbrain dopaminergic neuron diversity by single-cell gene expression profiling. Cell Rep 9(3):930-943.
-
(2014)
Cell Rep
, vol.9
, Issue.3
, pp. 930-943
-
-
Poulin, J.F.1
-
67
-
-
84984677948
-
Disentangling neural cell diversity using single-cell transcriptomics
-
Poulin JF et al (2016) Disentangling neural cell diversity using single-cell transcriptomics. Nat Neurosci 19(9):1131-1141.
-
(2016)
Nat Neurosci
, vol.19
, Issue.9
, pp. 1131-1141
-
-
Poulin, J.F.1
-
68
-
-
84864880991
-
Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells
-
Ramskold D et al (2012) Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells. Nat Biotechnol 30(8):777-782.
-
(2012)
Nat Biotechnol
, vol.30
, Issue.8
, pp. 777-782
-
-
Ramskold, D.1
-
69
-
-
84876085773
-
Quartz-seq: a highly reproducible and sensitive single-cell RNA sequencing method, reveals non-genetic gene-expression heterogeneity
-
Sasagawa Y et al (2013) Quartz-seq: a highly reproducible and sensitive single-cell RNA sequencing method, reveals non-genetic gene-expression heterogeneity. Genome Biol 14(4): R31.
-
(2013)
Genome Biol
, vol.14
, Issue.4
-
-
Sasagawa, Y.1
-
70
-
-
84974587998
-
Wishbone identifies bifurcating developmental trajectories from single-cell data
-
Setty M et al (2016) Wishbone identifies bifurcating developmental trajectories from single-cell data. Nat Biotechnol 34(6):637-645.
-
(2016)
Nat Biotechnol
, vol.34
, Issue.6
, pp. 637-645
-
-
Setty, M.1
-
71
-
-
84903185013
-
Single-cell RNA-seq reveals dynamic paracrine control of cellular variation
-
Shalek AK et al (2014) Single-cell RNA-seq reveals dynamic paracrine control of cellular variation. Nature 510(7505):363-369.
-
(2014)
Nature
, vol.510
, Issue.7505
, pp. 363-369
-
-
Shalek, A.K.1
-
72
-
-
84983741021
-
Comprehensive classification of retinal bipolar neurons by single-cell transcriptomics
-
Shekhar K et al (2016) Comprehensive classification of retinal bipolar neurons by single-cell transcriptomics. Cell 166(5):1308-1323 (e30).
-
(2016)
Cell
, vol.166
, Issue.5
, pp. 1308-1323
-
-
Shekhar, K.1
-
73
-
-
53649106195
-
Next-generation DNA sequencing
-
Shendure J, Ji H (2008) Next-generation DNA sequencing. Nat Biotechnol 26(10):1135-1145.
-
(2008)
Nat Biotechnol
, vol.26
, Issue.10
, pp. 1135-1145
-
-
Shendure, J.1
Ji, H.2
-
74
-
-
84941010341
-
Single-cell RNA-seq with Waterfall reveals molecular cascades underlying adult neurogenesis
-
Shin J et al (2015) Single-cell RNA-seq with Waterfall reveals molecular cascades underlying adult neurogenesis. Cell Stem Cell 17(3):360-372.
-
(2015)
Cell Stem Cell
, vol.17
, Issue.3
, pp. 360-372
-
-
Shin, J.1
-
75
-
-
84856398949
-
Digital RNA sequencing minimizes sequence-dependent bias and amplification noise with optimized single-molecule barcodes
-
Shiroguchi K et al (2012) Digital RNA sequencing minimizes sequence-dependent bias and amplification noise with optimized single-molecule barcodes. Proc Natl Acad Sci U S A 109(4):1347-1352.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, Issue.4
, pp. 1347-1352
-
-
Shiroguchi, K.1
-
76
-
-
84857658829
-
Transcriptional code and disease map for adult retinal cell types
-
Siegert S et al (2012) Transcriptional code and disease map for adult retinal cell types. Nat Neurosci 15(3):487-495.
-
(2012)
Nat Neurosci
, vol.15
, Issue.3
, pp. 487-495
-
-
Siegert, S.1
-
77
-
-
29444452573
-
Molecular taxonomy of major neuronal classes in the adult mouse forebrain
-
Sugino K et al (2006) Molecular taxonomy of major neuronal classes in the adult mouse forebrain. Nat Neurosci 9(1):99-107.
-
(2006)
Nat Neurosci
, vol.9
, Issue.1
, pp. 99-107
-
-
Sugino, K.1
-
78
-
-
67349146589
-
mRNA-Seq whole-transcriptome analysis of a single cell
-
Tang F et al (2009) mRNA-Seq whole-transcriptome analysis of a single cell. Nat Meth 6(5):377-382.
-
(2009)
Nat Meth
, vol.6
, Issue.5
, pp. 377-382
-
-
Tang, F.1
-
79
-
-
80053128156
-
A resource of Cre driver lines for genetic targeting of GABAergic neurons in cerebral cortex
-
Taniguchi H et al (2011) A resource of Cre driver lines for genetic targeting of GABAergic neurons in cerebral cortex. Neuron 71(6):995-1013.
-
(2011)
Neuron
, vol.71
, Issue.6
, pp. 995-1013
-
-
Taniguchi, H.1
-
80
-
-
84961327715
-
Adult mouse cortical cell taxonomy revealed by single cell transcriptomics
-
Tasic B et al (2016) Adult mouse cortical cell taxonomy revealed by single cell transcriptomics. Nat Neurosci.
-
(2016)
Nat Neurosci
-
-
Tasic, B.1
-
81
-
-
84960110736
-
Sequential transcriptional waves direct the differentiation of newborn neurons in the mouse neocortex
-
Telley L et al (2016) Sequential transcriptional waves direct the differentiation of newborn neurons in the mouse neocortex. Science 351(6280):1443-1446.
-
(2016)
Science
, vol.351
, Issue.6280
, pp. 1443-1446
-
-
Telley, L.1
-
82
-
-
84955681537
-
Fixed single-cell transcriptomic characterization of human radial glial diversity
-
Thomsen ER et al (2016) Fixed single-cell transcriptomic characterization of human radial glial diversity. Nat Methods 13(1):87-93.
-
(2016)
Nat Methods
, vol.13
, Issue.1
, pp. 87-93
-
-
Thomsen, E.R.1
-
83
-
-
0038702458
-
Single-cell transcriptional analysis of neuronal progenitors
-
Tietjen I et al (2003) Single-cell transcriptional analysis of neuronal progenitors. Neuron 38(2):161-175.
-
(2003)
Neuron
, vol.38
, Issue.2
, pp. 161-175
-
-
Tietjen, I.1
-
84
-
-
84900873950
-
The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells
-
Trapnell C et al (2014) The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells. Nat Biotechnol 32(4):381-386.
-
(2014)
Nat Biotechnol
, vol.32
, Issue.4
, pp. 381-386
-
-
Trapnell, C.1
-
85
-
-
34249307504
-
Molecular heterogeneity of developing retinal ganglion and amacrine cells revealed through single cell gene expression profiling
-
Trimarchi JM et al (2007) Molecular heterogeneity of developing retinal ganglion and amacrine cells revealed through single cell gene expression profiling. J Comp Neurol 502(6):1047-1065.
-
(2007)
J Comp Neurol
, vol.502
, Issue.6
, pp. 1047-1065
-
-
Trimarchi, J.M.1
-
86
-
-
84921466417
-
Unbiased classification of sensory neuron types by large-scale single-cell RNA sequencing
-
Usoskin D et al (2015) Unbiased classification of sensory neuron types by large-scale single-cell RNA sequencing. Nat Neurosci 18(1):145-153.
-
(2015)
Nat Neurosci
, vol.18
, Issue.1
, pp. 145-153
-
-
Usoskin, D.1
-
87
-
-
84893910301
-
Quantitative assessment of single-cell RNA-sequencing methods
-
Wu AR et al (2014) Quantitative assessment of single-cell RNA-sequencing methods. Nat Methods 11(1):41-46.
-
(2014)
Nat Methods
, vol.11
, Issue.1
, pp. 41-46
-
-
Wu, A.R.1
-
88
-
-
84995576127
-
A single-cell roadmap of lineage bifurcation in human esc models of embryonic brain development
-
Yao Z et al (2017) A single-cell roadmap of lineage bifurcation in human esc models of embryonic brain development. Cell Stem Cell.
-
(2017)
Cell Stem Cell
-
-
Yao, Z.1
-
89
-
-
84924565530
-
Brain structure Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq
-
Zeisel A et al (2015) Brain structure. Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq. Science 347(6226):1138-1142.
-
(2015)
Science
, vol.347
, Issue.6226
, pp. 1138-1142
-
-
Zeisel, A.1
-
90
-
-
84859744583
-
Large-scale cellular-resolution gene profiling in human neocortex reveals species-specific molecular signatures
-
Zeng H et al (2012) Large-scale cellular-resolution gene profiling in human neocortex reveals species-specific molecular signatures. Cell 149(2):483-496.
-
(2012)
Cell
, vol.149
, Issue.2
, pp. 483-496
-
-
Zeng, H.1
|