-
1
-
-
84897062083
-
A solution to dependency: using multilevel analysis to accommodate nested data
-
Aarts, E., Verhage, M., Veenvliet, J.V., Dolan, C.V., van der Sluis, S., A solution to dependency: using multilevel analysis to accommodate nested data. Nat. Neurosci. 17 (2014), 491–496.
-
(2014)
Nat. Neurosci.
, vol.17
, pp. 491-496
-
-
Aarts, E.1
Verhage, M.2
Veenvliet, J.V.3
Dolan, C.V.4
van der Sluis, S.5
-
2
-
-
84989867010
-
Novel genetic loci underlying human intracranial volume identified through genome-wide association
-
Adams, H.H., Hibar, D.P., Chouraki, V., Stein, J.L., Nyquist, P.A., Rentería, M.E., Trompet, S., Arias-Vasquez, A., Seshadri, S., Desrivières, S., et al. Novel genetic loci underlying human intracranial volume identified through genome-wide association. Nat. Neurosci. 19 (2016), 1569–1582.
-
(2016)
Nat. Neurosci.
, vol.19
, pp. 1569-1582
-
-
Adams, H.H.1
Hibar, D.P.2
Chouraki, V.3
Stein, J.L.4
Nyquist, P.A.5
Rentería, M.E.6
Trompet, S.7
Arias-Vasquez, A.8
Seshadri, S.9
Desrivières, S.10
-
3
-
-
58149463874
-
Chromosomal dynamics at the Shh locus: limb bud-specific differential regulation of competence and active transcription
-
Amano, T., Sagai, T., Tanabe, H., Mizushina, Y., Nakazawa, H., Shiroishi, T., Chromosomal dynamics at the Shh locus: limb bud-specific differential regulation of competence and active transcription. Dev. Cell 16 (2009), 47–57.
-
(2009)
Dev. Cell
, vol.16
, pp. 47-57
-
-
Amano, T.1
Sagai, T.2
Tanabe, H.3
Mizushina, Y.4
Nakazawa, H.5
Shiroishi, T.6
-
4
-
-
51949109503
-
The T-box transcription factor Eomes/Tbr2 regulates neurogenesis in the cortical subventricular zone
-
Arnold, S.J., Huang, G.J., Cheung, A.F., Era, T., Nishikawa, S., Bikoff, E.K., Molnár, Z., Robertson, E.J., Groszer, M., The T-box transcription factor Eomes/Tbr2 regulates neurogenesis in the cortical subventricular zone. Genes Dev. 22 (2008), 2479–2484.
-
(2008)
Genes Dev.
, vol.22
, pp. 2479-2484
-
-
Arnold, S.J.1
Huang, G.J.2
Cheung, A.F.3
Era, T.4
Nishikawa, S.5
Bikoff, E.K.6
Molnár, Z.7
Robertson, E.J.8
Groszer, M.9
-
5
-
-
34047107193
-
Homozygous silencing of T-box transcription factor EOMES leads to microcephaly with polymicrogyria and corpus callosum agenesis
-
Baala, L., Briault, S., Etchevers, H.C., Laumonnier, F., Natiq, A., Amiel, J., Boddaert, N., Picard, C., Sbiti, A., Asermouh, A., et al. Homozygous silencing of T-box transcription factor EOMES leads to microcephaly with polymicrogyria and corpus callosum agenesis. Nat. Genet. 39 (2007), 454–456.
-
(2007)
Nat. Genet.
, vol.39
, pp. 454-456
-
-
Baala, L.1
Briault, S.2
Etchevers, H.C.3
Laumonnier, F.4
Natiq, A.5
Amiel, J.6
Boddaert, N.7
Picard, C.8
Sbiti, A.9
Asermouh, A.10
-
6
-
-
84923224807
-
Genetic changes shaping the human brain
-
Bae, B.I., Jayaraman, D., Walsh, C.A., Genetic changes shaping the human brain. Dev. Cell 32 (2015), 423–434.
-
(2015)
Dev. Cell
, vol.32
, pp. 423-434
-
-
Bae, B.I.1
Jayaraman, D.2
Walsh, C.A.3
-
7
-
-
84978173600
-
A comprehensive transcriptional map of primate brain development
-
Bakken, T.E., Miller, J.A., Ding, S.L., Sunkin, S.M., Smith, K.A., Ng, L., Szafer, A., Dalley, R.A., Royall, J.J., Lemon, T., et al. A comprehensive transcriptional map of primate brain development. Nature 535 (2016), 367–375.
-
(2016)
Nature
, vol.535
, pp. 367-375
-
-
Bakken, T.E.1
Miller, J.A.2
Ding, S.L.3
Sunkin, S.M.4
Smith, K.A.5
Ng, L.6
Szafer, A.7
Dalley, R.A.8
Royall, J.J.9
Lemon, T.10
-
8
-
-
19344378337
-
REST and its corepressors mediate plasticity of neuronal gene chromatin throughout neurogenesis
-
Ballas, N., Grunseich, C., Lu, D.D., Speh, J.C., Mandel, G., REST and its corepressors mediate plasticity of neuronal gene chromatin throughout neurogenesis. Cell 121 (2005), 645–657.
-
(2005)
Cell
, vol.121
, pp. 645-657
-
-
Ballas, N.1
Grunseich, C.2
Lu, D.D.3
Speh, J.C.4
Mandel, G.5
-
9
-
-
0001677717
-
Controlling the false discovery rate - a practical and powerful approach to multiple testing
-
Benjamini, Y., Hochberg, Y., Controlling the false discovery rate - a practical and powerful approach to multiple testing. J. Royal Stat. Soc. B. 57 (1995), 289–300.
-
(1995)
J. Royal Stat. Soc. B.
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
10
-
-
84949432853
-
Mechanisms of long non-coding RNAs in mammalian nervous system development, plasticity, disease, and evolution
-
Briggs, J.A., Wolvetang, E.J., Mattick, J.S., Rinn, J.L., Barry, G., Mechanisms of long non-coding RNAs in mammalian nervous system development, plasticity, disease, and evolution. Neuron 88 (2015), 861–877.
-
(2015)
Neuron
, vol.88
, pp. 861-877
-
-
Briggs, J.A.1
Wolvetang, E.J.2
Mattick, J.S.3
Rinn, J.L.4
Barry, G.5
-
11
-
-
84888877924
-
Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
-
Buenrostro, J.D., Giresi, P.G., Zaba, L.C., Chang, H.Y., Greenleaf, W.J., Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position. Nat. Methods 10 (2013), 1213–1218.
-
(2013)
Nat. Methods
, vol.10
, pp. 1213-1218
-
-
Buenrostro, J.D.1
Giresi, P.G.2
Zaba, L.C.3
Chang, H.Y.4
Greenleaf, W.J.5
-
12
-
-
84877978530
-
Mechanisms and models of somatic cell reprogramming
-
Buganim, Y., Faddah, D.A., Jaenisch, R., Mechanisms and models of somatic cell reprogramming. Nat. Rev. Genet. 14 (2013), 427–439.
-
(2013)
Nat. Rev. Genet.
, vol.14
, pp. 427-439
-
-
Buganim, Y.1
Faddah, D.A.2
Jaenisch, R.3
-
13
-
-
38349127623
-
Development of the human cerebral cortex: Boulder Committee revisited
-
Bystron, I., Blakemore, C., Rakic, P., Development of the human cerebral cortex: Boulder Committee revisited. Nat. Rev. Neurosci. 9 (2008), 110–122.
-
(2008)
Nat. Rev. Neurosci.
, vol.9
, pp. 110-122
-
-
Bystron, I.1
Blakemore, C.2
Rakic, P.3
-
14
-
-
0025159354
-
The central nervous system in the Apert syndrome
-
Cohen, M.M. Jr., Kreiborg, S., The central nervous system in the Apert syndrome. Am. J. Med. Genet. 35 (1990), 36–45.
-
(1990)
Am. J. Med. Genet.
, vol.35
, pp. 36-45
-
-
Cohen, M.M.1
Kreiborg, S.2
-
15
-
-
84962890386
-
Advancing the understanding of autism disease mechanisms through genetics
-
de la Torre-Ubieta, L., Won, H., Stein, J.L., Geschwind, D.H., Advancing the understanding of autism disease mechanisms through genetics. Nat. Med. 22 (2016), 345–361.
-
(2016)
Nat. Med.
, vol.22
, pp. 345-361
-
-
de la Torre-Ubieta, L.1
Won, H.2
Stein, J.L.3
Geschwind, D.H.4
-
16
-
-
84912144889
-
Synaptic, transcriptional and chromatin genes disrupted in autism
-
De Rubeis, S., He, X., Goldberg, A.P., Poultney, C.S., Samocha, K., Cicek, A.E., Kou, Y., Liu, L., Fromer, M., Walker, S., et al. DDD Study Homozygosity Mapping Collaborative for Autism, UK10K Consortium. Synaptic, transcriptional and chromatin genes disrupted in autism. Nature 515 (2014), 209–215.
-
(2014)
Nature
, vol.515
, pp. 209-215
-
-
De Rubeis, S.1
He, X.2
Goldberg, A.P.3
Poultney, C.S.4
Samocha, K.5
Cicek, A.E.6
Kou, Y.7
Liu, L.8
Fromer, M.9
Walker, S.10
-
17
-
-
84925685098
-
fitdistrplus: An R Package for Fitting Distributions
-
Delignette-Muller, M.L., Dutang, C., fitdistrplus: An R Package for Fitting Distributions. J. Stat. Software, 64, 2015, 34.
-
(2015)
J. Stat. Software
, vol.64
, pp. 34
-
-
Delignette-Muller, M.L.1
Dutang, C.2
-
18
-
-
85035803822
-
Discovery of the first genome-wide significant risk loci For ADHD
-
Demontis, D., Walters, R.K., Martin, J., Mattheisen, M., Als, T.D., Agerbo, E., Belliveau, R., Bybjerg-Grauholm, J., Bækved-Hansen, M., Cerrato, F., et al. Discovery of the first genome-wide significant risk loci For ADHD. bioRxiv, 2017 https://doi.org/10.1101/145581.
-
(2017)
bioRxiv
-
-
Demontis, D.1
Walters, R.K.2
Martin, J.3
Mattheisen, M.4
Als, T.D.5
Agerbo, E.6
Belliveau, R.7
Bybjerg-Grauholm, J.8
Bækved-Hansen, M.9
Cerrato, F.10
-
19
-
-
84992735630
-
A viral strategy for targeting and manipulating interneurons across vertebrate species
-
Dimidschstein, J., Chen, Q., Tremblay, R., Rogers, S.L., Saldi, G.A., Guo, L., Xu, Q., Liu, R., Lu, C., Chu, J., et al. A viral strategy for targeting and manipulating interneurons across vertebrate species. Nat. Neurosci. 19 (2016), 1743–1749.
-
(2016)
Nat. Neurosci.
, vol.19
, pp. 1743-1749
-
-
Dimidschstein, J.1
Chen, Q.2
Tremblay, R.3
Rogers, S.L.4
Saldi, G.A.5
Guo, L.6
Xu, Q.7
Liu, R.8
Lu, C.9
Chu, J.10
-
20
-
-
84990861958
-
Mutations in human accelerated regions disrupt cognition and social behavior
-
Doan, R.N., Bae, B.I., Cubelos, B., Chang, C., Hossain, A.A., Al-Saad, S., Mukaddes, N.M., Oner, O., Al-Saffar, M., Balkhy, S., et al. Mutations in human accelerated regions disrupt cognition and social behavior. Cell 167 (2016), 341–354.
-
(2016)
Cell
, vol.167
, pp. 341-354
-
-
Doan, R.N.1
Bae, B.I.2
Cubelos, B.3
Chang, C.4
Hossain, A.A.5
Al-Saad, S.6
Mukaddes, N.M.7
Oner, O.8
Al-Saffar, M.9
Balkhy, S.10
-
21
-
-
84871809302
-
STAR: ultrafast universal RNA-seq aligner
-
Dobin, A., Davis, C.A., Schlesinger, F., Drenkow, J., Zaleski, C., Jha, S., Batut, P., Chaisson, M., Gingeras, T.R., STAR: ultrafast universal RNA-seq aligner. Bioinformatics 29 (2013), 15–21.
-
(2013)
Bioinformatics
, vol.29
, pp. 15-21
-
-
Dobin, A.1
Davis, C.A.2
Schlesinger, F.3
Drenkow, J.4
Zaleski, C.5
Jha, S.6
Batut, P.7
Chaisson, M.8
Gingeras, T.R.9
-
22
-
-
84921540377
-
Rational design of highly active sgRNAs for CRISPR-Cas9-mediated gene inactivation
-
Doench, J.G., Hartenian, E., Graham, D.B., Tothova, Z., Hegde, M., Smith, I., Sullender, M., Ebert, B.L., Xavier, R.J., Root, D.E., Rational design of highly active sgRNAs for CRISPR-Cas9-mediated gene inactivation. Nat. Biotechnol. 32 (2014), 1262–1267.
-
(2014)
Nat. Biotechnol.
, vol.32
, pp. 1262-1267
-
-
Doench, J.G.1
Hartenian, E.2
Graham, D.B.3
Tothova, Z.4
Hegde, M.5
Smith, I.6
Sullender, M.7
Ebert, B.L.8
Xavier, R.J.9
Root, D.E.10
-
23
-
-
68449101067
-
Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt
-
Durinck, S., Spellman, P.T., Birney, E., Huber, W., Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt. Nat. Protoc. 4 (2009), 1184–1191.
-
(2009)
Nat. Protoc.
, vol.4
, pp. 1184-1191
-
-
Durinck, S.1
Spellman, P.T.2
Birney, E.3
Huber, W.4
-
24
-
-
84865790047
-
An integrated encyclopedia of DNA elements in the human genome
-
ENCODE Project Consortium. An integrated encyclopedia of DNA elements in the human genome. Nature 489 (2012), 57–74.
-
(2012)
Nature
, vol.489
, pp. 57-74
-
-
-
25
-
-
84926632357
-
Large-scale imputation of epigenomic datasets for systematic annotation of diverse human tissues
-
Ernst, J., Kellis, M., Large-scale imputation of epigenomic datasets for systematic annotation of diverse human tissues. Nat. Biotechnol. 33 (2015), 364–376.
-
(2015)
Nat. Biotechnol.
, vol.33
, pp. 364-376
-
-
Ernst, J.1
Kellis, M.2
-
26
-
-
0036337981
-
Pax6 is required to regulate the cell cycle and the rate of progression from symmetrical to asymmetrical division in mammalian cortical progenitors
-
Estivill-Torrus, G., Pearson, H., van Heyningen, V., Price, D.J., Rashbass, P., Pax6 is required to regulate the cell cycle and the rate of progression from symmetrical to asymmetrical division in mammalian cortical progenitors. Development 129 (2002), 455–466.
-
(2002)
Development
, vol.129
, pp. 455-466
-
-
Estivill-Torrus, G.1
Pearson, H.2
van Heyningen, V.3
Price, D.J.4
Rashbass, P.5
-
27
-
-
85000443086
-
Partitioning heritability by functional annotation using genome-wide association summary statistics
-
Finucane, H.K., Bulik-Sullivan, B., Gusev, A., Trynka, G., Reshef, Y., Loh, P.R., Anttila, V., Xu, H., Zang, C., Farh, K., et al. ReproGen Consortium Schizophrenia Working Group of the Psychiatric Genomics Consortium, RACI Consortium. Partitioning heritability by functional annotation using genome-wide association summary statistics. Nat. Genet. 47 (2015), 1228–1235.
-
(2015)
Nat. Genet.
, vol.47
, pp. 1228-1235
-
-
Finucane, H.K.1
Bulik-Sullivan, B.2
Gusev, A.3
Trynka, G.4
Reshef, Y.5
Loh, P.R.6
Anttila, V.7
Xu, H.8
Zang, C.9
Farh, K.10
-
28
-
-
84928699628
-
Regulation of chromatin accessibility and Zic binding at enhancers in the developing cerebellum
-
Frank, C.L., Liu, F., Wijayatunge, R., Song, L., Biegler, M.T., Yang, M.G., Vockley, C.M., Safi, A., Gersbach, C.A., Crawford, G.E., West, A.E., Regulation of chromatin accessibility and Zic binding at enhancers in the developing cerebellum. Nat. Neurosci. 18 (2015), 647–656.
-
(2015)
Nat. Neurosci.
, vol.18
, pp. 647-656
-
-
Frank, C.L.1
Liu, F.2
Wijayatunge, R.3
Song, L.4
Biegler, M.T.5
Yang, M.G.6
Vockley, C.M.7
Safi, A.8
Gersbach, C.A.9
Crawford, G.E.10
West, A.E.11
-
29
-
-
84886996828
-
Cortical evolution: judge the brain by its cover
-
Geschwind, D.H., Rakic, P., Cortical evolution: judge the brain by its cover. Neuron 80 (2013), 633–647.
-
(2013)
Neuron
, vol.80
, pp. 633-647
-
-
Geschwind, D.H.1
Rakic, P.2
-
30
-
-
0041880122
-
SOX2 functions to maintain neural progenitor identity
-
Graham, V., Khudyakov, J., Ellis, P., Pevny, L., SOX2 functions to maintain neural progenitor identity. Neuron 39 (2003), 749–765.
-
(2003)
Neuron
, vol.39
, pp. 749-765
-
-
Graham, V.1
Khudyakov, J.2
Ellis, P.3
Pevny, L.4
-
31
-
-
85014068526
-
Layer-specific chromatin accessibility landscapes reveal regulatory networks in adult mouse visual cortex
-
Gray, L.T., Yao, Z., Nguyen, T.N., Kim, T.K., Zeng, H., Tasic, B., Layer-specific chromatin accessibility landscapes reveal regulatory networks in adult mouse visual cortex. eLife, 6, 2017, e21883.
-
(2017)
eLife
, vol.6
, pp. e21883
-
-
Gray, L.T.1
Yao, Z.2
Nguyen, T.N.3
Kim, T.K.4
Zeng, H.5
Tasic, B.6
-
32
-
-
84929001104
-
Human genomics. The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans
-
GTEx Consortium. Human genomics. The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans. Science 348 (2015), 648–660.
-
(2015)
Science
, vol.348
, pp. 648-660
-
-
-
33
-
-
36549046563
-
Spatial and temporal specification of neural fates by transcription factor codes
-
Guillemot, F., Spatial and temporal specification of neural fates by transcription factor codes. Development 134 (2007), 3771–3780.
-
(2007)
Development
, vol.134
, pp. 3771-3780
-
-
Guillemot, F.1
-
34
-
-
84961637981
-
Visualizing genomic data using Gviz and Bioconductor
-
Hahne, F., Ivanek, R., Visualizing genomic data using Gviz and Bioconductor. Methods Mol. Biol. 1418 (2016), 335–351.
-
(2016)
Methods Mol. Biol.
, vol.1418
, pp. 335-351
-
-
Hahne, F.1
Ivanek, R.2
-
35
-
-
84858068675
-
Removing technical variability in RNA-seq data using conditional quantile normalization
-
Hansen, K.D., Irizarry, R.A., Wu, Z., Removing technical variability in RNA-seq data using conditional quantile normalization. Biostatistics 13 (2012), 204–216.
-
(2012)
Biostatistics
, vol.13
, pp. 204-216
-
-
Hansen, K.D.1
Irizarry, R.A.2
Wu, Z.3
-
36
-
-
84865760395
-
GENCODE: the reference human genome annotation for The ENCODE Project
-
Harrow, J., Frankish, A., Gonzalez, J.M., Tapanari, E., Diekhans, M., Kokocinski, F., Aken, B.L., Barrell, D., Zadissa, A., Searle, S., et al. GENCODE: the reference human genome annotation for The ENCODE Project. Genome Res. 22 (2012), 1760–1774.
-
(2012)
Genome Res.
, vol.22
, pp. 1760-1774
-
-
Harrow, J.1
Frankish, A.2
Gonzalez, J.M.3
Tapanari, E.4
Diekhans, M.5
Kokocinski, F.6
Aken, B.L.7
Barrell, D.8
Zadissa, A.9
Searle, S.10
-
37
-
-
84911422892
-
Generation of mouse models of myeloid malignancy with combinatorial genetic lesions using CRISPR-Cas9 genome editing
-
Heckl, D., Kowalczyk, M.S., Yudovich, D., Belizaire, R., Puram, R.V., McConkey, M.E., Thielke, A., Aster, J.C., Regev, A., Ebert, B.L., Generation of mouse models of myeloid malignancy with combinatorial genetic lesions using CRISPR-Cas9 genome editing. Nat. Biotechnol. 32 (2014), 941–946.
-
(2014)
Nat. Biotechnol.
, vol.32
, pp. 941-946
-
-
Heckl, D.1
Kowalczyk, M.S.2
Yudovich, D.3
Belizaire, R.4
Puram, R.V.5
McConkey, M.E.6
Thielke, A.7
Aster, J.C.8
Regev, A.9
Ebert, B.L.10
-
38
-
-
33847298964
-
The gateway to transcription: identifying, characterizing and understanding promoters in the eukaryotic genome
-
Heintzman, N.D., Ren, B., The gateway to transcription: identifying, characterizing and understanding promoters in the eukaryotic genome. Cell. Mol. Life Sci. 64 (2007), 386–400.
-
(2007)
Cell. Mol. Life Sci.
, vol.64
, pp. 386-400
-
-
Heintzman, N.D.1
Ren, B.2
-
39
-
-
84978086948
-
Common genetic variants influence whorls in fingerprint patterns
-
Ho, Y.Y., Evans, D.M., Montgomery, G.W., Henders, A.K., Kemp, J.P., Timpson, N.J., St Pourcain, B., Heath, A.C., Madden, P.A., Loesch, D.Z., et al. Common genetic variants influence whorls in fingerprint patterns. J. Invest. Dermatol. 136 (2016), 859–862.
-
(2016)
J. Invest. Dermatol.
, vol.136
, pp. 859-862
-
-
Ho, Y.Y.1
Evans, D.M.2
Montgomery, G.W.3
Henders, A.K.4
Kemp, J.P.5
Timpson, N.J.6
St Pourcain, B.7
Heath, A.C.8
Madden, P.A.9
Loesch, D.Z.10
-
40
-
-
84884165315
-
DNA targeting specificity of RNA-guided Cas9 nucleases
-
Hsu, P.D., Scott, D.A., Weinstein, J.A., Ran, F.A., Konermann, S., Agarwala, V., Li, Y., Fine, E.J., Wu, X., Shalem, O., et al. DNA targeting specificity of RNA-guided Cas9 nucleases. Nat. Biotechnol. 31 (2013), 827–832.
-
(2013)
Nat. Biotechnol.
, vol.31
, pp. 827-832
-
-
Hsu, P.D.1
Scott, D.A.2
Weinstein, J.A.3
Ran, F.A.4
Konermann, S.5
Agarwala, V.6
Li, Y.7
Fine, E.J.8
Wu, X.9
Shalem, O.10
-
41
-
-
84912101541
-
The contribution of de novo coding mutations to autism spectrum disorder
-
Iossifov, I., O'Roak, B.J., Sanders, S.J., Ronemus, M., Krumm, N., Levy, D., Stessman, H.A., Witherspoon, K.T., Vives, L., Patterson, K.E., et al. The contribution of de novo coding mutations to autism spectrum disorder. Nature 515 (2014), 216–221.
-
(2014)
Nature
, vol.515
, pp. 216-221
-
-
Iossifov, I.1
O'Roak, B.J.2
Sanders, S.J.3
Ronemus, M.4
Krumm, N.5
Levy, D.6
Stessman, H.A.7
Witherspoon, K.T.8
Vives, L.9
Patterson, K.E.10
-
42
-
-
84867785975
-
Expanded mutational spectrum of the GLI3 gene substantiates genotype-phenotype correlations
-
Jamsheer, A., Sowińska, A., Trzeciak, T., Jamsheer-Bratkowska, M., Geppert, A., Latos-Bieleńska, A., Expanded mutational spectrum of the GLI3 gene substantiates genotype-phenotype correlations. J. Appl. Genet. 53 (2012), 415–422.
-
(2012)
J. Appl. Genet.
, vol.53
, pp. 415-422
-
-
Jamsheer, A.1
Sowińska, A.2
Trzeciak, T.3
Jamsheer-Bratkowska, M.4
Geppert, A.5
Latos-Bieleńska, A.6
-
43
-
-
84887620842
-
A high-resolution map of the three-dimensional chromatin interactome in human cells
-
Jin, F., Li, Y., Dixon, J.R., Selvaraj, S., Ye, Z., Lee, A.Y., Yen, C.A., Schmitt, A.D., Espinoza, C.A., Ren, B., A high-resolution map of the three-dimensional chromatin interactome in human cells. Nature 503 (2013), 290–294.
-
(2013)
Nature
, vol.503
, pp. 290-294
-
-
Jin, F.1
Li, Y.2
Dixon, J.R.3
Selvaraj, S.4
Ye, Z.5
Lee, A.Y.6
Yen, C.A.7
Schmitt, A.D.8
Espinoza, C.A.9
Ren, B.10
-
44
-
-
34250159524
-
Genome-wide mapping of in vivo protein-DNA interactions
-
Johnson, D.S., Mortazavi, A., Myers, R.M., Wold, B., Genome-wide mapping of in vivo protein-DNA interactions. Science 316 (2007), 1497–1502.
-
(2007)
Science
, vol.316
, pp. 1497-1502
-
-
Johnson, D.S.1
Mortazavi, A.2
Myers, R.M.3
Wold, B.4
-
45
-
-
84868336049
-
Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease
-
Jostins, L., Ripke, S., Weersma, R.K., Duerr, R.H., McGovern, D.P., Hui, K.Y., Lee, J.C., Schumm, L.P., Sharma, Y., Anderson, C.A., et al., International IBD Genetics Consortium (IIBDGC). Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease. Nature 491 (2012), 119–124.
-
(2012)
Nature
, vol.491
, pp. 119-124
-
-
Jostins, L.1
Ripke, S.2
Weersma, R.K.3
Duerr, R.H.4
McGovern, D.P.5
Hui, K.Y.6
Lee, J.C.7
Schumm, L.P.8
Sharma, Y.9
Anderson, C.A.10
-
46
-
-
70949087224
-
The transition from radial glial to intermediate progenitor cell is inhibited by FGF signaling during corticogenesis
-
Kang, W., Wong, L.C., Shi, S.H., Hébert, J.M., The transition from radial glial to intermediate progenitor cell is inhibited by FGF signaling during corticogenesis. J. Neurosci. 29 (2009), 14571–14580.
-
(2009)
J. Neurosci.
, vol.29
, pp. 14571-14580
-
-
Kang, W.1
Wong, L.C.2
Shi, S.H.3
Hébert, J.M.4
-
47
-
-
80054993342
-
Spatio-temporal transcriptome of the human brain
-
Kang, H.J., Kawasawa, Y.I., Cheng, F., Zhu, Y., Xu, X., Li, M., Sousa, A.M., Pletikos, M., Meyer, K.A., Sedmak, G., et al. Spatio-temporal transcriptome of the human brain. Nature 478 (2011), 483–489.
-
(2011)
Nature
, vol.478
, pp. 483-489
-
-
Kang, H.J.1
Kawasawa, Y.I.2
Cheng, F.3
Zhu, Y.4
Xu, X.5
Li, M.6
Sousa, A.M.7
Pletikos, M.8
Meyer, K.A.9
Sedmak, G.10
-
48
-
-
0003494941
-
Development of the Prefrontal Cortex: Evolution, Neurobiology, and Behavior
-
P.H. Brookes Baltimore
-
Krasnegor, N.A., Lyon, G.R., Goldman-Rakic, P.S., Development of the Prefrontal Cortex: Evolution, Neurobiology, and Behavior. 1997, P.H. Brookes, Baltimore.
-
(1997)
-
-
Krasnegor, N.A.1
Lyon, G.R.2
Goldman-Rakic, P.S.3
-
49
-
-
67651036549
-
The glial nature of embryonic and adult neural stem cells
-
Kriegstein, A., Alvarez-Buylla, A., The glial nature of embryonic and adult neural stem cells. Annu. Rev. Neurosci. 32 (2009), 149–184.
-
(2009)
Annu. Rev. Neurosci.
, vol.32
, pp. 149-184
-
-
Kriegstein, A.1
Alvarez-Buylla, A.2
-
50
-
-
84923362619
-
Integrative analysis of 111 reference human epigenomes
-
Kundaje, A., Meuleman, W., Ernst, J., Bilenky, M., Yen, A., Heravi-Moussavi, A., Kheradpour, P., Zhang, Z., Wang, J., Ziller, M.J., et al., Roadmap Epigenomics Consortium. Integrative analysis of 111 reference human epigenomes. Nature 518 (2015), 317–330.
-
(2015)
Nature
, vol.518
, pp. 317-330
-
-
Kundaje, A.1
Meuleman, W.2
Ernst, J.3
Bilenky, M.4
Yen, A.5
Heravi-Moussavi, A.6
Kheradpour, P.7
Zhang, Z.8
Wang, J.9
Ziller, M.J.10
-
51
-
-
84883368195
-
Software for computing and annotating genomic ranges
-
Lawrence, M., Huber, W., Pagès, H., Aboyoun, P., Carlson, M., Gentleman, R., Morgan, M.T., Carey, V.J., Software for computing and annotating genomic ranges. PLoS Comput. Biol., 9, 2013, e1003118.
-
(2013)
PLoS Comput. Biol.
, vol.9
, pp. e1003118
-
-
Lawrence, M.1
Huber, W.2
Pagès, H.3
Aboyoun, P.4
Carlson, M.5
Gentleman, R.6
Morgan, M.T.7
Carey, V.J.8
-
52
-
-
67649884743
-
Fast and accurate short read alignment with Burrows-Wheeler transform
-
Li, H., Durbin, R., Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25 (2009), 1754–1760.
-
(2009)
Bioinformatics
, vol.25
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
53
-
-
84872094223
-
Neural development is dependent on the function of specificity protein 2 in cell cycle progression
-
Liang, H., Xiao, G., Yin, H., Hippenmeyer, S., Horowitz, J.M., Ghashghaei, H.T., Neural development is dependent on the function of specificity protein 2 in cell cycle progression. Development 140 (2013), 552–561.
-
(2013)
Development
, vol.140
, pp. 552-561
-
-
Liang, H.1
Xiao, G.2
Yin, H.3
Hippenmeyer, S.4
Horowitz, J.M.5
Ghashghaei, H.T.6
-
54
-
-
84924629414
-
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
-
Love, M.I., Huber, W., Anders, S., Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol., 15, 2014, 550.
-
(2014)
Genome Biol.
, vol.15
, pp. 550
-
-
Love, M.I.1
Huber, W.2
Anders, S.3
-
55
-
-
79959924122
-
Development and evolution of the human neocortex
-
Lui, J.H., Hansen, D.V., Kriegstein, A.R., Development and evolution of the human neocortex. Cell 146 (2011), 18–36.
-
(2011)
Cell
, vol.146
, pp. 18-36
-
-
Lui, J.H.1
Hansen, D.V.2
Kriegstein, A.R.3
-
56
-
-
84976884426
-
JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles
-
Mathelier, A., Fornes, O., Arenillas, D.J., Chen, C.Y., Denay, G., Lee, J., Shi, W., Shyr, C., Tan, G., Worsley-Hunt, R., et al. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res. 44:D1 (2016), D110–D115.
-
(2016)
Nucleic Acids Res.
, vol.44
, Issue.D1
, pp. D110-D115
-
-
Mathelier, A.1
Fornes, O.2
Arenillas, D.J.3
Chen, C.Y.4
Denay, G.5
Lee, J.6
Shi, W.7
Shyr, C.8
Tan, G.9
Worsley-Hunt, R.10
-
57
-
-
77952214662
-
GREAT improves functional interpretation of cis-regulatory regions
-
McLean, C.Y., Bristor, D., Hiller, M., Clarke, S.L., Schaar, B.T., Lowe, C.B., Wenger, A.M., Bejerano, G., GREAT improves functional interpretation of cis-regulatory regions. Nat. Biotechnol. 28 (2010), 495–501.
-
(2010)
Nat. Biotechnol.
, vol.28
, pp. 495-501
-
-
McLean, C.Y.1
Bristor, D.2
Hiller, M.3
Clarke, S.L.4
Schaar, B.T.5
Lowe, C.B.6
Wenger, A.M.7
Bejerano, G.8
-
58
-
-
84900303453
-
Transcriptional landscape of the prenatal human brain
-
Miller, J.A., Ding, S.L., Sunkin, S.M., Smith, K.A., Ng, L., Szafer, A., Ebbert, A., Riley, Z.L., Royall, J.J., Aiona, K., et al. Transcriptional landscape of the prenatal human brain. Nature 508 (2014), 199–206.
-
(2014)
Nature
, vol.508
, pp. 199-206
-
-
Miller, J.A.1
Ding, S.L.2
Sunkin, S.M.3
Smith, K.A.4
Ng, L.5
Szafer, A.6
Ebbert, A.7
Riley, Z.L.8
Royall, J.J.9
Aiona, K.10
-
59
-
-
84865840434
-
Predicting cell-type-specific gene expression from regions of open chromatin
-
Natarajan, A., Yardimci, G.G., Sheffield, N.C., Crawford, G.E., Ohler, U., Predicting cell-type-specific gene expression from regions of open chromatin. Genome Res. 22 (2012), 1711–1722.
-
(2012)
Genome Res.
, vol.22
, pp. 1711-1722
-
-
Natarajan, A.1
Yardimci, G.G.2
Sheffield, N.C.3
Crawford, G.E.4
Ohler, U.5
-
60
-
-
84920733366
-
Genomic perspectives of transcriptional regulation in forebrain development
-
Nord, A.S., Pattabiraman, K., Visel, A., Rubenstein, J.L., Genomic perspectives of transcriptional regulation in forebrain development. Neuron 85 (2015), 27–47.
-
(2015)
Neuron
, vol.85
, pp. 27-47
-
-
Nord, A.S.1
Pattabiraman, K.2
Visel, A.3
Rubenstein, J.L.4
-
61
-
-
84964388798
-
Genetic variants associated with subjective well-being, depressive symptoms, and neuroticism identified through genome-wide analyses
-
Okbay, A., Baselmans, B.M., De Neve, J.E., Turley, P., Nivard, M.G., Fontana, M.A., Meddens, S.F., Linnér, R.K., Rietveld, C.A., Derringer, J., et al., LifeLines Cohort Study. Genetic variants associated with subjective well-being, depressive symptoms, and neuroticism identified through genome-wide analyses. Nat. Genet. 48 (2016), 624–633.
-
(2016)
Nat. Genet.
, vol.48
, pp. 624-633
-
-
Okbay, A.1
Baselmans, B.M.2
De Neve, J.E.3
Turley, P.4
Nivard, M.G.5
Fontana, M.A.6
Meddens, S.F.7
Linnér, R.K.8
Rietveld, C.A.9
Derringer, J.10
-
62
-
-
84969760786
-
Genome-wide association study identifies 74 loci associated with educational attainment
-
Okbay, A., Beauchamp, J.P., Fontana, M.A., Lee, J.J., Pers, T.H., Rietveld, C.A., Turley, P., Chen, G.B., Emilsson, V., Meddens, S.F., et al., LifeLines Cohort Study. Genome-wide association study identifies 74 loci associated with educational attainment. Nature 533 (2016), 539–542.
-
(2016)
Nature
, vol.533
, pp. 539-542
-
-
Okbay, A.1
Beauchamp, J.P.2
Fontana, M.A.3
Lee, J.J.4
Pers, T.H.5
Rietveld, C.A.6
Turley, P.7
Chen, G.B.8
Emilsson, V.9
Meddens, S.F.10
-
63
-
-
84889561601
-
Integrative functional genomic analyses implicate specific molecular pathways and circuits in autism
-
Parikshak, N.N., Luo, R., Zhang, A., Won, H., Lowe, J.K., Chandran, V., Horvath, S., Geschwind, D.H., Integrative functional genomic analyses implicate specific molecular pathways and circuits in autism. Cell 155 (2013), 1008–1021.
-
(2013)
Cell
, vol.155
, pp. 1008-1021
-
-
Parikshak, N.N.1
Luo, R.2
Zhang, A.3
Won, H.4
Lowe, J.K.5
Chandran, V.6
Horvath, S.7
Geschwind, D.H.8
-
64
-
-
84937520584
-
Systems biology and gene networks in neurodevelopmental and neurodegenerative disorders
-
Parikshak, N.N., Gandal, M.J., Geschwind, D.H., Systems biology and gene networks in neurodevelopmental and neurodegenerative disorders. Nat. Rev. Genet. 16 (2015), 441–458.
-
(2015)
Nat. Rev. Genet.
, vol.16
, pp. 441-458
-
-
Parikshak, N.N.1
Gandal, M.J.2
Geschwind, D.H.3
-
65
-
-
74949092081
-
Detection of nonneutral substitution rates on mammalian phylogenies
-
Pollard, K.S., Hubisz, M.J., Rosenbloom, K.R., Siepel, A., Detection of nonneutral substitution rates on mammalian phylogenies. Genome Res. 20 (2010), 110–121.
-
(2010)
Genome Res.
, vol.20
, pp. 110-121
-
-
Pollard, K.S.1
Hubisz, M.J.2
Rosenbloom, K.R.3
Siepel, A.4
-
66
-
-
84948457494
-
Molecular identity of human outer radial glia during cortical development
-
Pollen, A.A., Nowakowski, T.J., Chen, J., Retallack, H., Sandoval-Espinosa, C., Nicholas, C.R., Shuga, J., Liu, S.J., Oldham, M.C., Diaz, A., et al. Molecular identity of human outer radial glia during cortical development. Cell 163 (2015), 55–67.
-
(2015)
Cell
, vol.163
, pp. 55-67
-
-
Pollen, A.A.1
Nowakowski, T.J.2
Chen, J.3
Retallack, H.4
Sandoval-Espinosa, C.5
Nicholas, C.R.6
Shuga, J.7
Liu, S.J.8
Oldham, M.C.9
Diaz, A.10
-
67
-
-
84868690595
-
Role of Kruppel-like factor 4 in neurogenesis and radial neuronal migration in the developing cerebral cortex
-
Qin, S., Zhang, C.L., Role of Kruppel-like factor 4 in neurogenesis and radial neuronal migration in the developing cerebral cortex. Mol. Cell. Biol. 32 (2012), 4297–4305.
-
(2012)
Mol. Cell. Biol.
, vol.32
, pp. 4297-4305
-
-
Qin, S.1
Zhang, C.L.2
-
68
-
-
0034235176
-
Basic fibroblast growth factor (Fgf2) is necessary for cell proliferation and neurogenesis in the developing cerebral cortex
-
Raballo, R., Rhee, J., Lyn-Cook, R., Leckman, J.F., Schwartz, M.L., Vaccarino, F.M., Basic fibroblast growth factor (Fgf2) is necessary for cell proliferation and neurogenesis in the developing cerebral cortex. J. Neurosci. 20 (2000), 5012–5023.
-
(2000)
J. Neurosci.
, vol.20
, pp. 5012-5023
-
-
Raballo, R.1
Rhee, J.2
Lyn-Cook, R.3
Leckman, J.F.4
Schwartz, M.L.5
Vaccarino, F.M.6
-
69
-
-
84959344588
-
A predictive computational framework for direct reprogramming between human cell types
-
Rackham, O.J., Firas, J., Fang, H., Oates, M.E., Holmes, M.L., Knaupp, A.S., Suzuki, H., Nefzger, C.M., Daub, C.O., Shin, J.W., et al., FANTOM Consortium. A predictive computational framework for direct reprogramming between human cell types. Nat. Genet. 48 (2016), 331–335.
-
(2016)
Nat. Genet.
, vol.48
, pp. 331-335
-
-
Rackham, O.J.1
Firas, J.2
Fang, H.3
Oates, M.E.4
Holmes, M.L.5
Knaupp, A.S.6
Suzuki, H.7
Nefzger, C.M.8
Daub, C.O.9
Shin, J.W.10
-
70
-
-
70349274112
-
Evolution of the neocortex: a perspective from developmental biology
-
Rakic, P., Evolution of the neocortex: a perspective from developmental biology. Nat. Rev. Neurosci. 10 (2009), 724–735.
-
(2009)
Nat. Rev. Neurosci.
, vol.10
, pp. 724-735
-
-
Rakic, P.1
-
71
-
-
84887010498
-
Genome engineering using the CRISPR-Cas9 system
-
Ran, F.A., Hsu, P.D., Wright, J., Agarwala, V., Scott, D.A., Zhang, F., Genome engineering using the CRISPR-Cas9 system. Nat. Protoc. 8 (2013), 2281–2308.
-
(2013)
Nat. Protoc.
, vol.8
, pp. 2281-2308
-
-
Ran, F.A.1
Hsu, P.D.2
Wright, J.3
Agarwala, V.4
Scott, D.A.5
Zhang, F.6
-
72
-
-
84924561748
-
Evolutionary genomics. Evolutionary changes in promoter and enhancer activity during human corticogenesis
-
Reilly, S.K., Yin, J., Ayoub, A.E., Emera, D., Leng, J., Cotney, J., Sarro, R., Rakic, P., Noonan, J.P., Evolutionary genomics. Evolutionary changes in promoter and enhancer activity during human corticogenesis. Science 347 (2015), 1155–1159.
-
(2015)
Science
, vol.347
, pp. 1155-1159
-
-
Reilly, S.K.1
Yin, J.2
Ayoub, A.E.3
Emera, D.4
Leng, J.5
Cotney, J.6
Sarro, R.7
Rakic, P.8
Noonan, J.P.9
-
73
-
-
84961392741
-
Genetic risk for autism spectrum disorders and neuropsychiatric variation in the general population
-
Robinson, E.B., St Pourcain, B., Anttila, V., Kosmicki, J.A., Bulik-Sullivan, B., Grove, J., Maller, J., Samocha, K.E., Sanders, S.J., Ripke, S., et al., iPSYCH-SSI-Broad Autism Group. Genetic risk for autism spectrum disorders and neuropsychiatric variation in the general population. Nat. Genet. 48 (2016), 552–555.
-
(2016)
Nat. Genet.
, vol.48
, pp. 552-555
-
-
Robinson, E.B.1
St Pourcain, B.2
Anttila, V.3
Kosmicki, J.A.4
Bulik-Sullivan, B.5
Grove, J.6
Maller, J.7
Samocha, K.E.8
Sanders, S.J.9
Ripke, S.10
-
74
-
-
84876686460
-
From neural development to cognition: unexpected roles for chromatin
-
Ronan, J.L., Wu, W., Crabtree, G.R., From neural development to cognition: unexpected roles for chromatin. Nat. Rev. Genet. 14 (2013), 347–359.
-
(2013)
Nat. Rev. Genet.
, vol.14
, pp. 347-359
-
-
Ronan, J.L.1
Wu, W.2
Crabtree, G.R.3
-
75
-
-
84856008906
-
Differential oestrogen receptor binding is associated with clinical outcome in breast cancer
-
Ross-Innes, C.S., Stark, R., Teschendorff, A.E., Holmes, K.A., Ali, H.R., Dunning, M.J., Brown, G.D., Gojis, O., Ellis, I.O., Green, A.R., et al. Differential oestrogen receptor binding is associated with clinical outcome in breast cancer. Nature 481 (2012), 389–393.
-
(2012)
Nature
, vol.481
, pp. 389-393
-
-
Ross-Innes, C.S.1
Stark, R.2
Teschendorff, A.E.3
Holmes, K.A.4
Ali, H.R.5
Dunning, M.J.6
Brown, G.D.7
Gojis, O.8
Ellis, I.O.9
Green, A.R.10
-
76
-
-
84902039717
-
Comprehensive Developmental Neuroscience: Patterning and Cell Type Specification in the Developing CNS and PNS
-
First Edition Elsevier/Academic Press Amsterdam
-
Rubenstein, J.L.R., Rakic, P., Comprehensive Developmental Neuroscience: Patterning and Cell Type Specification in the Developing CNS and PNS. First Edition, 2013, Elsevier/Academic Press, Amsterdam.
-
(2013)
-
-
Rubenstein, J.L.R.1
Rakic, P.2
-
77
-
-
84904804929
-
Biological insights from 108 schizophrenia-associated genetic loci
-
Schizophrenia Working Group of the Psychiatric Genomics Consortium. Biological insights from 108 schizophrenia-associated genetic loci. Nature 511 (2014), 421–427.
-
(2014)
Nature
, vol.511
, pp. 421-427
-
-
-
78
-
-
53049083077
-
Tbr2 directs conversion of radial glia into basal precursors and guides neuronal amplification by indirect neurogenesis in the developing neocortex
-
Sessa, A., Mao, C.A., Hadjantonakis, A.K., Klein, W.H., Broccoli, V., Tbr2 directs conversion of radial glia into basal precursors and guides neuronal amplification by indirect neurogenesis in the developing neocortex. Neuron 60 (2008), 56–69.
-
(2008)
Neuron
, vol.60
, pp. 56-69
-
-
Sessa, A.1
Mao, C.A.2
Hadjantonakis, A.K.3
Klein, W.H.4
Broccoli, V.5
-
79
-
-
84903574160
-
A quantitative framework to evaluate modeling of cortical development by neural stem cells
-
Stein, J.L., de la Torre-Ubieta, L., Tian, Y., Parikshak, N.N., Hernández, I.A., Marchetto, M.C., Baker, D.K., Lu, D., Hinman, C.R., Lowe, J.K., et al. A quantitative framework to evaluate modeling of cortical development by neural stem cells. Neuron 83 (2014), 69–86.
-
(2014)
Neuron
, vol.83
, pp. 69-86
-
-
Stein, J.L.1
de la Torre-Ubieta, L.2
Tian, Y.3
Parikshak, N.N.4
Hernández, I.A.5
Marchetto, M.C.6
Baker, D.K.7
Lu, D.8
Hinman, C.R.9
Lowe, J.K.10
-
80
-
-
77951578174
-
Fgfr2 is required for the development of the medial prefrontal cortex and its connections with limbic circuits
-
Stevens, H.E., Smith, K.M., Maragnoli, M.E., Fagel, D., Borok, E., Shanabrough, M., Horvath, T.L., Vaccarino, F.M., Fgfr2 is required for the development of the medial prefrontal cortex and its connections with limbic circuits. J. Neurosci. 30 (2010), 5590–5602.
-
(2010)
J. Neurosci.
, vol.30
, pp. 5590-5602
-
-
Stevens, H.E.1
Smith, K.M.2
Maragnoli, M.E.3
Fagel, D.4
Borok, E.5
Shanabrough, M.6
Horvath, T.L.7
Vaccarino, F.M.8
-
81
-
-
84897833435
-
Growth and folding of the mammalian cerebral cortex: from molecules to malformations
-
Sun, T., Hevner, R.F., Growth and folding of the mammalian cerebral cortex: from molecules to malformations. Nat. Rev. Neurosci. 15 (2014), 217–232.
-
(2014)
Nat. Rev. Neurosci.
, vol.15
, pp. 217-232
-
-
Sun, T.1
Hevner, R.F.2
-
82
-
-
84970044605
-
TFBSTools: an R/bioconductor package for transcription factor binding site analysis
-
Tan, G., Lenhard, B., TFBSTools: an R/bioconductor package for transcription factor binding site analysis. Bioinformatics 32 (2016), 1555–1556.
-
(2016)
Bioinformatics
, vol.32
, pp. 1555-1556
-
-
Tan, G.1
Lenhard, B.2
-
83
-
-
84910062118
-
The cell biology of neurogenesis: toward an understanding of the development and evolution of the neocortex
-
Taverna, E., Götz, M., Huttner, W.B., The cell biology of neurogenesis: toward an understanding of the development and evolution of the neocortex. Annu. Rev. Cell Dev. Biol. 30 (2014), 465–502.
-
(2014)
Annu. Rev. Cell Dev. Biol.
, vol.30
, pp. 465-502
-
-
Taverna, E.1
Götz, M.2
Huttner, W.B.3
-
84
-
-
52149084405
-
Explaining human uniqueness: genome interactions with environment, behaviour and culture
-
Varki, A., Geschwind, D.H., Eichler, E.E., Explaining human uniqueness: genome interactions with environment, behaviour and culture. Nat. Rev. Genet. 9 (2008), 749–763.
-
(2008)
Nat. Rev. Genet.
, vol.9
, pp. 749-763
-
-
Varki, A.1
Geschwind, D.H.2
Eichler, E.E.3
-
85
-
-
33846112470
-
VISTA Enhancer Browser–a database of tissue-specific human enhancers
-
Visel, A., Minovitsky, S., Dubchak, I., Pennacchio, L.A., VISTA Enhancer Browser–a database of tissue-specific human enhancers. Nucleic Acids Res. 35 (2007), D88–D92.
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. D88-D92
-
-
Visel, A.1
Minovitsky, S.2
Dubchak, I.3
Pennacchio, L.A.4
-
86
-
-
84874118170
-
A high-resolution enhancer atlas of the developing telencephalon
-
Visel, A., Taher, L., Girgis, H., May, D., Golonzhka, O., Hoch, R.V., McKinsey, G.L., Pattabiraman, K., Silberberg, S.N., Blow, M.J., et al. A high-resolution enhancer atlas of the developing telencephalon. Cell 152 (2013), 895–908.
-
(2013)
Cell
, vol.152
, pp. 895-908
-
-
Visel, A.1
Taher, L.2
Girgis, H.3
May, D.4
Golonzhka, O.5
Hoch, R.V.6
McKinsey, G.L.7
Pattabiraman, K.8
Silberberg, S.N.9
Blow, M.J.10
-
87
-
-
84869436774
-
Interpreting noncoding genetic variation in complex traits and human disease
-
Ward, L.D., Kellis, M., Interpreting noncoding genetic variation in complex traits and human disease. Nat. Biotechnol. 30 (2012), 1095–1106.
-
(2012)
Nat. Biotechnol.
, vol.30
, pp. 1095-1106
-
-
Ward, L.D.1
Kellis, M.2
-
88
-
-
84993993658
-
Chromosome conformation elucidates regulatory relationships in developing human brain
-
Won, H., de la Torre-Ubieta, L., Stein, J.L., Parikshak, N.N., Huang, J., Opland, C.K., Gandal, M.J., Sutton, G.J., Hormozdiari, F., Lu, D., et al. Chromosome conformation elucidates regulatory relationships in developing human brain. Nature 538 (2016), 523–527.
-
(2016)
Nature
, vol.538
, pp. 523-527
-
-
Won, H.1
de la Torre-Ubieta, L.2
Stein, J.L.3
Parikshak, N.N.4
Huang, J.5
Opland, C.K.6
Gandal, M.J.7
Sutton, G.J.8
Hormozdiari, F.9
Lu, D.10
-
89
-
-
84865098402
-
GO-Elite: a flexible solution for pathway and ontology over-representation
-
Zambon, A.C., Gaj, S., Ho, I., Hanspers, K., Vranizan, K., Evelo, C.T., Conklin, B.R., Pico, A.R., Salomonis, N., GO-Elite: a flexible solution for pathway and ontology over-representation. Bioinformatics 28 (2012), 2209–2210.
-
(2012)
Bioinformatics
, vol.28
, pp. 2209-2210
-
-
Zambon, A.C.1
Gaj, S.2
Ho, I.3
Hanspers, K.4
Vranizan, K.5
Evelo, C.T.6
Conklin, B.R.7
Pico, A.R.8
Salomonis, N.9
-
90
-
-
53849146020
-
Model-based analysis of ChIP-Seq (MACS)
-
Zhang, Y., Liu, T., Meyer, C.A., Eeckhoute, J., Johnson, D.S., Bernstein, B.E., Nusbaum, C., Myers, R.M., Brown, M., Li, W., Liu, X.S., Model-based analysis of ChIP-Seq (MACS). Genome Biol., 9, 2008, R137.
-
(2008)
Genome Biol.
, vol.9
, pp. R137
-
-
Zhang, Y.1
Liu, T.2
Meyer, C.A.3
Eeckhoute, J.4
Johnson, D.S.5
Bernstein, B.E.6
Nusbaum, C.7
Myers, R.M.8
Brown, M.9
Li, W.10
Liu, X.S.11
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