Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position

Nature Methods

Volumn 10, Issue 12, 2013, Pages 1213-1218

  Buenrostro, Jason D ^a   Giresi, Paul G ^a   Zaba, Lisa C ^a   Chang, Howard Y ^a   Greenleaf, William J ^a  

^a STANFORD UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA BINDING PROTEIN; DNA FRAGMENT; INTERFERON REGULATORY FACTOR 4; INTERLEUKIN 2; LONG UNTRANSLATED RNA; STAT3 PROTEIN; TRANSCRIPTION FACTOR CTCF; TRANSCRIPTION FACTOR NFAT; TRANSPOSASE;

ARTICLE; ASSAY FOR TRANSPOSASE ACCESSIBLE CHROMATIN; B LYMPHOCYTE; CD4+ T LYMPHOCYTE; CHROMATIN; CHROMATIN IMMUNOPRECIPITATION; DNA BINDING; DNA FLANKING REGION; DNA SEQUENCE; DNA TRANSPOSITION; EPIGENETICS; GENE CONTROL; GENE EXPRESSION PROFILING; GENE REGULATORY NETWORK; GENETIC CONSERVATION; HIGH THROUGHPUT SEQUENCING; HUMAN; HUMAN CELL; IN VITRO STUDY; LEUKOCYTE; LYMPHOBLASTOID CELL LINE; NORMAL HUMAN; NUCLEOSOME; NUCLEOTIDE BINDING SITE; NUCLEOTIDE SEQUENCE; POSITION WEIGHT MATRIX; PRIORITY JOURNAL; STEREOSPECIFICITY; T LYMPHOCYTE; TRANSCRIPTION INITIATION SITE; TRANSPOSON;

CD4-POSITIVE T-LYMPHOCYTES; CELL SEPARATION; CHROMATIN; COMPUTATIONAL BIOLOGY; DIMERIZATION; DNA-BINDING PROTEINS; ENHANCER ELEMENTS, GENETIC; EPIGENOMICS; FLOW CYTOMETRY; HUMANS; INTERLEUKIN-2; NUCLEOSOMES; POLYMERASE CHAIN REACTION; TRANSCRIPTION FACTORS;

EID: 84888877924     PISSN: 15487091     EISSN: 15487105     Source Type: Journal    
DOI: 10.1038/nmeth.2688     Document Type: Article

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