Evolutionary changes in promoter and enhancer activity during human corticogenesis

Science

Volumn 347, Issue 6226, 2015, Pages 1155-1159

  Reilly, Steven K ^a   Yin, Jun ^a   Ayoub, Albert E ^a   Emera, Deena ^a   Leng, Jing ^a,b   Cotney, Justin ^a   Sarro, Richard ^a   Rakic, Pasko ^a,c   Noonan, James P ^a,b  

^a YALE UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b YALE UNIVERSITY   (United States)

^c Illumina   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

TRANSCRIPTION FACTOR;

GENE EXPRESSION; GENETIC ANALYSIS; HUMAN EVOLUTION; PRIMATE; PROTEIN; RODENT;

ARTICLE; BINDING SITE; BRAIN CELL; BRAIN DEVELOPMENT; DEVELOPMENTAL STAGE; FOREBRAIN; GENE EXPRESSION; GENOME; HUMAN; MOUSE; NEURAL STEM CELL; NONHUMAN; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; REGULATORY MECHANISM; REPORTER GENE; TELENCEPHALON; ANIMAL; BRAIN CORTEX; COMPARATIVE STUDY; ENHANCER REGION; GENE EXPRESSION REGULATION; GENETIC EPIGENESIS; GENETICS; GROWTH, DEVELOPMENT AND AGING; MOLECULAR EVOLUTION; ORGANOGENESIS; PROMOTER REGION; RAT; RHESUS MONKEY;

MACACA MULATTA;

ANIMALS; CEREBRAL CORTEX; ENHANCER ELEMENTS, GENETIC; EPIGENESIS, GENETIC; EVOLUTION, MOLECULAR; GENE EXPRESSION REGULATION, DEVELOPMENTAL; HUMANS; MACACA MULATTA; MICE; ORGANOGENESIS; PROMOTER REGIONS, GENETIC; RATS;

EID: 84924561748     PISSN: 00368075     EISSN: 10959203     Source Type: Journal    
DOI: 10.1126/science.1260943     Document Type: Article

References (25)

1. D. H. Geschwind, P. Rakic, Neuron 80, 633-647 (2013).
2. M. L. Schwartz, P. Rakic, P. S. Goldman-Rakic, Proc. Natl. Acad. Sci. U.S.A. 88, 1354-1358 (1991).
3. P. Rakic, Nat. Rev. Neurosci. 10, 724-735 (2009).
4. P. Rakic, A. E. Ayoub, J. J. Breunig, M. H. Dominguez, Trends Neurosci. 32, 291-301 (2009).
5. S. Prabhakar, J. P. Noonan, S. Pääbo, E. M. Rubin, Science 314, 786-786 (2006).
6. J. A. Capra, G. D. Erwin, G. McKinsey, J. L. R. Rubenstein, K. S. Pollard, Philos. Trans. R. Soc. London Ser. B 368, 20130025 (2013).
7. G. Konopka et al., Neuron 75, 601-617 (2012).
8. J. Cotney et al., Genome Res. 22, 1069-1080 (2012).
9. J. Cotney et al., Cell 154, 185-196 (2013).
10. A. Rada-Iglesias et al., Nature 470, 279-283 (2011).
11. J. Ernst et al., Nature 473, 43-49 (2011).
12. T. S. Mikkelsen et al., Cell 143, 156-169 (2010).
13. P. Rakic, Science 183, 425-427 (1974).
14. P. Rakic, Science 241, 170-176 (1988).
15. P. Rakic, R. L. Sidman, J. Neuropathol. Exp. Neurol. 27, 240-276 (1968).
16. T. Takahashi, T. Goto, S. Miyama, R. S. Nowakowski, V. S. Caviness Jr., J. Neurosci. 19, 10357-10371 (1999).
17. C. Y. McLean et al., Nat. Biotechnol. 28, 495-501 (2010).
18. A. Visel, S. Minovitsky, I. Dubchak, L. A. Pennacchio, Nucleic Acids Res. 35 (suppl. 1), D88-D92 (2007).
19. A. Visel et al., Cell 152, 895-908 (2013).
20. J. R. Dixon et al., Nature 485, 376-380 (2012).
21. P. Langfelder, S. Horvath, BMC Bioinformatics 9, 559 (2008).
22. BrainSpan Atlas of the Developing Human Brain; www.brainspan.org.
23. J. C. Quinn et al., Dev. Biol. 302, 50-65 (2007).
24. F. M. Vaccarino et al., Nat. Neurosci. 2, 246-253 (1999).
25. A. L. Pearlman, A. M. Sheppard, Prog. Brain Res. 108, 119-134 (1996).