Is there a relationship between intestinal microbiota, dietary compounds, and obesity?

Trends in Food Science and Technology

Volumn 70, Issue , 2017, Pages 105-113

  Kałużna Czaplińska, Joanna ^a   Gątarek, Paulina ^a   Chartrand, Max Stanley ^b   Dadar, Maryam ^c   Bjørklund, Geir ^d  

^a LODZ UNIVERSITY OF TECHNOLOGY   (Poland)

^b DigiCare Behavioral Research   (United States)

^c RAZI VACCINE AND SERUM RESEARCH INSTITUTE   (Iran)

^d Department of Research   (Norway)

Author keywords

Dietary compounds; Lifespan; Metabolic; Microbiota; Obesity

Indexed keywords

METABOLISM; METABOLITES;

DIETARY COMPOUNDS; LIFE SPAN; METABOLIC; MICROBIOTAS; OBESITY;

NUTRITION;

EID: 85032345802     PISSN: 09242244     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.tifs.2017.10.010     Document Type: Review

References (93)

1. Albenberg, L.G., Wu, G.D., Diet and the intestinal microbiome: Associations, functions, and implications for health and disease. Gastroenterology 146 (2014), 1564–1572.
2. Andoh, A., Kuzuoka, H., Tsujikawa, T., Nakamura, S., Hirai, F., Suzuki, Y., et al. Multicenter analysis of fecal microbiota profiles in Japanese patients with Crohn's disease. Journal of Gastroenterol 47 (2012), 1298–1307.
3. Anhê, F.F., Varin, T.V., Le Barz, M., Desjardins, Y., Levy, E., Roy, D., et al. Gut microbiota dysbiosis in obesity-linked metabolic diseases and prebiotic potential of polyphenol-rich extracts. Current Obesity Reports 4 (2015), 389–400.
4. Armougom, F., Henry, M., Vialettes, B., Raccah, D., Raoult, D., Monitoring bacterial community of human gut microbiota reveals an increase in Lactobacillus in obese patients and Methanogens in anorexic patients. PLoS One, 4, 2009, e7125.
5. Bäckhed, F., Ding, H., Wang, T., Hooper, L.V., Koh, G.Y., Nagy, A., et al. The gut microbiota as an environmental factor that regulates fat storage. Proceedings of the National Academy of Sciences of the United States of America 101 (2004), 15718–15723.
6. Balamurugan, R., George, G., Kabeerdoss, J., Hepsiba, J., Chandragunasekaran, A.M., Ramakrishna, B.S., Quantitative differences in intestinal Faecalibacterium prausnitzii in obese Indian children. The British Journal of Nutrition 103 (2010), 335–338.
7. Baothman, O.A., Zamzami, M.A., Taher, I., Abubaker, J., Abu-Farha, M., The role of Gut Microbiota in the development of obesity and diabetes. Lipids in Health and Disease, 15, 2016, 108.
8. Becker, C., Neurath, M.F., Wirtz, S., The intestinal microbiota in inflammatory bowel disease. Institute of Laboratory Animal Resources (US) Journal 56 (2015), 192–204.
9. Belkaid, Y., Hand, T., Role of the microbiota in immunity and inflammation. Cell 157 (2014), 121–141.
10. Boulangé, C.L., Neves, A.L., Chilloux, J., Nicholson, J.K., Dumas, M.E., Impact of the gut microbiota on inflammation, obesity, and metabolic disease. Genome Medicine, 8, 2016, 42.
11. Brandacher, G., Hoeller, E., Fuchs, D., Weiss, H.G., Chronic immune activation underlies morbid obesity: Is IDO a key player?. Current Drug Metabolism 8 (2007), 289–295.
12. Bron, P.A., Kleerebezem, M., Brummer, R.J., Cani, P.D., Mercenier, A., MacDonald, T.T., et al. Can probiotics modulate human disease by impacting intestinal barrier function?. The British Journal of Nutrition 117 (2017), 93–107.
13. Brown, R.R., Metabolism and biology of tryptophan. Some clinical implications. Advances in Experimental Medicine and Biology 398 (1996), 15–25.
14. Caballero, B., Finer, N., Wurtman, R.J., Plasma amino acids and insulin levels in obesity: Response to carbohydrate intake and tryptophan supplements. Metabolism 37 (1988), 672–676.
15. Caesar, R., Tremaroli, V., Kovatcheva-Datchary, P., Cani, P.D., Bäckhed, F., Crosstalk between gut microbiota and dietary lipids aggravates WAT inflammation through TLR signaling. Cell Metabolism 22 (2015), 658–668.
16. Cani, P.D., Delzenne, N.M., Involvement of the gut microbiota in the development of low grade inflammation associated with obesity: Focus on this neglected partner. Acta Gastroenterologica Belgica 73 (2010), 267–269.
17. Cardona, F., Andrés-Lacueva, C., Tulipani, S., Tinahones, F.J., Queipo-Ortuño, M.I., Benefits of polyphenols on gut microbiota and implications in human health. Journal of Nutritional Biochemistry 24 (2013), 1415–1422.
18. Carlson, J., Slavin, J., Health benefits of fibre, prebiotics and probiotics: A review of intestinal health and related health claims. Quality Assurance and Safety of Crops & Foods 8 (2016), 539–554.
19. Cavaliere, H., Medeiros-Neto, G., The anorectic effect of increasing doses of L-tryptophan in obese patients. Eating and Weight Disorders: EWD 2 (1997), 211–215.
20. Claesson, M.J., Cusack, S., O'Sullivan, O., Greene-Diniz, R., de Weerd, H., Flannery, E., et al. Composition, variability, and temporal stability of the intestinal microbiota of the elderly. Proc Natl Acad Sci U S A. 1 (2011), 4586–4591.
21. Claesson, M.J., Jeffery, I.B., Conde, S., Power, S.E., O'connor, E.M., Cusack, S., et al. Gut microbiota composition correlates with diet and health in the elderly. Nature, 492, 2012, 178.
22. Clarke, S.F., Murphy, E.F., O'Sullivan, O., Lucey, A.J., Humphreys, M., Hogan, A., et al. Exercise and associated dietary extremes impact on gut microbial diversity. Gut 63 (2014), 1913–1920.
23. Clemente, J.C., Ursell, L.K., Wegener Parfrey, L., Knight, R., The impact of the gut microbiota on human health: An integrative view. Cell 148 (2012), 1258–1270.
24. Collado, M.C., Laitinen, K., Salminen, S., Isolauri, E., Maternal weight and excessive weight gain during pregnancy modify the immunomodulatory potential of breast milk. Pediatric Research 72 (2012), 77–85.
25. Cotter, P.D., Stanton, C., Ross, R.P., Hill, C., The impact of antibiotics on the gut microbiota as revealed by high throughput DNA sequencing. Discovery Medicine 13 (2012), 193–199.
26. Dahiya, D.K., Renuka, M.K., Puniya, M., Shandilya, U.K., Dhewa, T., Kumar, N., et al. Gut microbiota modulation and its relationship with obesity using prebiotic fibers and probiotics: A review. Frontiers in Microbiology, 8, 2017, 563.
27. David, L.A., Maurice, C.F., Carmody, R.N., Gootenberg, D.B., Button, J.E., Wolfe, B.E., et al. Diet rapidly and reproducibly alters the human gut microbiome. Nature 505 (2014), 559–563.
28. De Filippo, C., Cavalieri, D., Di Paola, M., Ramazzotti, M., Poullet, J.B., Massart, S., et al. Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa. Proceedings of the National Academy of Sciences of the United States of America 107 (2010), 14691–14696.
29. Dewulf, E.M., Cani, P.D., Claus, S.P., Fuentes, S., Puylaert, P.G., Neyrinck, A.M., et al. Insight into the prebiotic concept: Lessons from an exploratory, double blind intervention study with inulin-type fructans in obese women. Gut 62 (2013), 1112–1121.
30. Dominguez-Bello, M.G., Costello, E.K., Contreras, M., Magris, M., Hidalgo, G., Fierer, N., et al. Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns. Proc Natl Acad Sci U S A 107 (2010), 11971–11975.
31. Duda-Chodak, A., Tarko, T., Satora, P., Sroka, P., Interaction of dietary compounds, especially polyphenols, with the intestinal microbiota: A review. European Journal of Nutrition 54 (2015), 325–341.
32. Duncan, S.H., Louis, P., Thomson, J.M., Flint, H.J., The role of pH in determining the species composition of the human colonic microbiota. Environmental Microbiology 11 (2009), 2112–2122.
33. Duranti, S., Ferrario, C., van Sinderen, D., Ventura, M., Turroni, F., Obesity and microbiota: An example of an intricate relationship. Genes & Nutrition, 12, 2017, 18.
34. Eckburg, P.B., Bik, E.M., Bernstein, C.N., Purdom, E., Dethlefsen, L., Sargent, M., et al. Diversity of the human intestinal microbial flora. Science 308 (2005), 1635–1638.
35. Etienne-Mesmin, L., Chassaing, B., Gewirtz, A.T., Tryptophan: A gut microbiota-derived metabolites regulating inflammation. World Journal of Gastrointestinal Pharmacology and Therapeutics 8 (2017), 7–9.
36. Frank, D.N., Amand, A. L. St, Feldman, R.A., Boedeker, E.C., Harpaz, N., Pace, N.R., Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases. Proceedings of the National Academy of Sciences of the United States of America 104 (2007), 13780–13785.
37. Gill, S.R., Pop, M., DeBoy, R.T., Eckburg, P.B., Turnbaugh, P.J., Samuel, B.S., et al. Metagenomic analysis of the human distal gut microbiome. Science 312 (2006), 1355–1359.
38. Halford, J.C., Blundell, J.E., Separate systems for serotonin and leptin in appetite control. Annals of Medicine 32 (2000), 222–232.
39. Hamaker, B.R., Tuncil, Y.E., A perspective on the complexity of dietary fiber structures and their potential effect on the gut microbiota. Journal of Molecular Biology 426 (2014), 3838–3850.
40. Harakeh, S.M., Khan, I., Kumosani, T., Barbour, E., Almasaudi, S.B., Bahijri, S.M., et al. Gut microbiota: A contributing factor to obesity. Frontiers in Cellular and Infection Microbiology, 6, 2016, 95.
41. Holmes, D., Gut microbiota: Antidiabetic drug treatment confounds gut dysbiosis associated with type 2 diabetes mellitus. Nature reviews. Endocrinology, 12, 2016, 61.
42. Hooper, L.V., Littman, D.R., Macpherson, A.J., Interactions between the microbiota and the immune system. Science 336 (2012), 1268–1273.
43. Huang, E.Y., Leone, V.A., Devkota, S., Wang, Y., Brady, M.J., Chang, E.B., Composition of dietary fat source shapes gut microbiota architecture and alters host inflammatory mediators in mouse adipose tissue. JPEN. Journal of Parenteral and Enteral Nutrition 37 (2013), 746–754.
44. Hu, X., Wang, T., Jin, F., Alzheimer's disease and gut microbiota. Science China. Life sciences 59 (2016), 1006–1023.
45. Kalliomäki, M., Collado, M.C., Salminen, S., Isolauri, E., Early differences in fecal microbiota composition in children may predict overweight. Am J Clin Nutr 87 (2008), 534–538.
46. Kumari, M., Kozyrskyj, A.L., Gut microbial metabolism defines host metabolism: An emerging perspective in obesity and allergic inflammation. Obesity Reviews 18 (2017), 18–31.
47. Laparra, J.M., Sanz, Y., Interactions of gut microbiota with functional food components and nutraceuticals. Pharmacological Research 61 (2010), 219–225.
48. Larsen, N., Vogensen, F.K., Gøbel, R.J., Michaelsen, K.F., Forssten, S.D., Lahtinen, S.J., et al. Effect of Lactobacillus salivarius Ls-33 on fecal microbiota in obese adolescents. Clin Nutr 32 (2013), 935–940.
49. Lee, S.J., Bose, S., Seo, J.G., Chung, W.S., Lim, C.Y., Kim, H., The effects of co-administration of probiotics with herbal medicine on obesity, metabolic endotoxemia and dysbiosis: A randomized double-blind controlled clinical trial. Clin Nutr 33 (2014), 973–981.
50. Lee, H.C., Jenner, A.M., Low, C.S., Lee, Y.K., Effect of tea phenolics and their aromatic fecal bacterial metabolites on intestinal microbiota. Research in Microbiology 157 (2006), 876–884.
51. Li, X., Guo, J., Ji, K., Zhang, P., Bamboo shoot fiber prevents obesity in mice by modulating the gut microbiota. Scientific Reports, 6, 2016, 32953.
52. Li, S., Yingyi, G., Chen, L., Lijuan, G., Ou, S., Peng, X., Lean rats gained more body weight from a high-fructooligosaccharide diet. Food & Function 6 (2015), 2315–2321.
53. Louis, P., Flint, H.J., Diversity, metabolism and microbial ecology of butyrate-producing bacteria from the human large intestine. FEMS Microbiology Letters 294 (2009), 1–8.
54. Louis, P., Hold, G.L., Flint, H.J., The gut microbiota, bacterial metabolites and colorectal cancer. Nature Reviews. Microbiology 10 (2014), 661–672.
55. Lozupone, C.A., Stombaugh, J.I., Gordon, J.I., Jansson, J.K., Knight, R., Diversity, stability and resilience of the human gut microbiota. Nature 489 (2012), 220–230.
56. Luoto, R., Kalliomäki, M., Laitinen, K., Isolauri, E., The impact of perinatal probiotic intervention on the development of overweight and obesity: Follow-up study from birth to 10 years. Int J Obes (Lond) 34 (2010), 1531–1537.
57. Lyte, M., Microbial endocrinology in the microbiome-gut-brain axis: How bacterial production and utilization of neurochemicals influence behavior. PLoS Pathog, 9, 2013, e1003726.
58. Mangge, H., Summers, K.L., Meinitzer, A., Zelzer, S., Almer, G., Prassl, R., et al. Obesity-related dysregulation of the tryptophan-kynurenine metabolism: Role of age and parameters of the metabolic syndrome. Obesity (Silver Spring) 22 (2014), 195–201.
59. Martinez, K.B., Leone, V., Chang, E.B., Western diets, gut dysbiosis, and metabolic diseases: Are they linked?. Gut Microbes 8 (2017), 130–142.
60. Mayorga-Reyes, L., González Vázquez, R., Cruz Arroyo, S.M., Melendez Avalos, A., Reyes Castillo, P.A., Chavaro Pérez, D.A., et al. Correlation between diet and gut bacteria in a population of young adults. International Journal of Food Sciences and Nutrition 67 (2016), 470–478.
61. Million, M., Maraninchi, M., Henry, M., Armougom, F., Richet, H., Carrieri, P., et al. Obesity-associated gut microbiota is enriched in Lactobacillus reuteri and depleted in Bifidobacterium animalis and Methanobrevibacter smithii. International Journal of Obesity 36 (2012), 817–825.
62. Morgan, X.C., Tickle, T.L., Sokol, H., Gevers, D., Devaney, K.L., Ward, D.V., et al. Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment. Genome Biology, 13(9), 2012, R79.
63. Nduhirabandi, F., Du Toit, E.F., Blackhurst, D., Marais, D., Lochner, A., Chronic melatonin consumption prevents obesity-related metabolic abnormalities and protects the heart against myocardial ischemia and reperfusion injury in a prediabetic model of diet-induced obesity. J Pineal Res. 50 (2011), 171–182.
64. Nicolucci, A.C., Hume, M.P., Martínez, I., Mayengbam, S., Walter, J., Reimer, R.A., Prebiotics reduce body fat and alter intestinal microbiota in children who are overweight or with obesity. Gastroenterology 153 (2017), 711–722.
65. O'Hara, A.M., Shanahan, F., The gut flora as a forgotten organ. EMBO 7 (2006), 688–693.
66. Ozdal, T., Sela, D.A., Xiao, J., Boyacioglu, D., Chen, F., Capanoglu, E., The reciprocal interactions between polyphenols and gut microbiota and effects on bioaccessibility. Nutrients, 8, 2016, 78.
67. Park, H.J., Lee, S.E., Kim, H.B., Isaacson, R.E., Seo, K.W., Song, K.H., Association of obesity with serum leptin, adiponectin, and serotonin and gut microflora in beagle dogs. Journal of Veterinary Internal Medicine 29 (2015), 43–50.
68. Payne, A.N., Chassard, C., Zimmermann, M., Müller, P., Stinca, S., Lacroix, C., The metabolic activity of gut microbiota in obese children is increased compared with normal-weight children and exhibits more exhaustive substrate utilization. Nutrition & Diabetes, 1, 2011, e12.
69. Possemiers, S., Bolca, S., Verstraete, W., Heyerick, A., The intestinal microbiome: A separate organ inside the body with the metabolic potential to influence the bioactivity of botanicals. Fitoterapia 82 (2011), 53–66.
70. Qin, J., Li, R., Raes, J., Arumugam, M., Burgdorf, K.S., Manichanh, C., Nielsen, N., Pons, N., Levenez, F., Yamada, T., Mende, D.R., Li, J., Xu, J., Li, S., Li, D., Cao, J., Wang, B., Liang, H., Zheng, H., Xie, Y., Tap, J., Lepage, P., Bertalan, M., Batto, J.M., Hansen, T., Paslier, D.L., Linneberg, Nielsen, A.H.B., Pelletier, E., Renault, P., Sicheritz-Ponten, T., Turner, K., Zhu, H., Yu, C., Li, S., Jian, M., Zhou, Y., Li, Y., Zhang, X., Li, S., Qin, N., Yang, H., Wang, J., Brunak, S., Doré, J., Guarner, F., Kristiansen, K., Pedersen, O., Parkhill, J., Weissenbach, J. MetaHIT Consortium, Bork, P., Ehrlich D, S., Wang, J., A human gut microbial gene catalog established by metagenomic sequencing. Nature 464 (2010), 59–65.
71. Queipo-Ortuño, M.I., Boto-Ordóñez, M., Murri, M., Gomez-Zumaquero, J.M., Clemente-Postigo, M., Estruch, R., et al. Influence of red wine polyphenols and ethanol on the gut microbiota ecology and biochemical biomarkers. American Journal of Clinical Nutrition 95 (2012), 1323–1334.
72. Ramakrishna, B.S., Role of the gut microbiota in human nutrition and metabolism. Journal of Gastroenterology and Hepatology 4 (2013), 9–17.
73. Riva, A., Borgo, F., Lassandro, C., Verduci, E., Morace, G., Borghi, E., et al. Pediatric obesity is associated with an altered gut microbiota and discordant shifts in Firmicutes populations. Environmental Microbiology 19 (2017), 95–105.
74. Roberfroid, M., Prebiotics: The concept revisited. Journal of Nutrition 137 (2007), 830S–837S.
75. Rosenbaum, M., Knight, R., Leibel, R.L., The gut microbiota in human energy homeostasis and obesity. Trends in Endocrinology and Metabolism 26 (2015), 493–501.
76. Salazar, N., Dewulf, E.M., Neyrinck, A.M., Bindels, L.B., Cani, P.D., Mahillon, J., et al. Inulin-type fructans modulate intestinal Bifidobacterium species populations and decrease fecal short-chain fatty acids in obese women. Clinical Nutrition 34 (2015), 501–507.
77. Schwiertz, A., Taras, D., Schäfer, K., Beijer, S., Bos, N.A., Donus, C., et al. Microbiota and SCFA in lean and overweight healthy subjects. Obesity (Silver Spring) 18 (2010), 190–195.
78. Simpson, H.L., Campbell, B.J., Review article: Dietary fibre-microbiota interactions. Alimentary Pharmacology & Therapeutics 42 (2015), 158–179.
79. Štšepetova, J., Sepp, E., Kolk, H., Lõivukene, K., Songisepp, E., Mikelsaar, M., Diversity and metabolic impact of intestinal Lactobacillus species in healthy adults and the elderly. The British Journal of Nutrition 105 (2011), 1235–1244.
80. Tang, W.H., Kitai, T., Hazen, S.L., Gut microbiota in cardiovascular health and disease. Circulation Research 120 (2017), 1183–1196.
81. Tsai, F., Coyle, W.J., The microbiome and obesity: Is obesity linked to our gut flora?. Current Gastroenterology Reports 11 (2009), 307–313.
82. Turnbaugh, P.J., Ridaura, V.K., Faith, J.J., Rey, F.E., Knight, R., Gordon, J.I., The effect of diet on the human gut microbiome: A metagenomic analysis in humanized gnotobiotic mice. Science Transitional Medicine, 1, 2009 6ra14.
83. Verdam, F.J., Fuentes, S., de Jonge, C., Zoetendal, E.G., Erbil, R., Greve, J.W., et al. Human intestinal microbiota composition is associated with local and systemic inflammation in obesity. Obesity (Silver Spring) 12 (2013), E607–E615.
84. Vinson, J.A., Su, X., Zubik, L., Bose, P., Phenol antioxidant quantity and quality in foods: Fruits. Journal of Agricultural and Food Chemistry 49 (2001), 5315–5321.
85. Walker, A.W., Ince, J., Duncan, S.H., Webster, L.M., Holtrop, G., Ze, X., et al. Dominant and diet-responsive groups of bacteria within the human colonic microbiota. The ISME Journal 5 (2011), 220–230.
86. Windey, K., De Preter, V., Verbeke, K., Relevance of protein fermentation to gut health. Molecular Nutrition & Food Research 56 (2012), 184–196.
87. World Health Organization. Data and statistics. [WWW document]. URL http://www.euro.who.int/en/health-topics/noncommunicable-diseases/obesity/data-and-statistics. Accessed 16.05.17.
88. Wu, G.D., Chen, J., Hoffmann, C., Bittinger, K., Chen, Y.Y., Keilbaugh, S.A., et al. Linking long-term dietary patterns with gut microbial enterotypes. Science 334 (2011), 105–108.
89. Xu, P., Wang, J., Hong, F., Wang, S., Jin, X., Xue, T., et al. Melatonin prevents obesity through modulation of gut microbiota in mice. Journal of Pineal Research, 62, 2017, e12399.
90. Yamakoshi, J., Tokutake, S., Kikuchi, M., Effect of proanthocyanidin- rich extract from grape seeds on human fecal flora and fecal odor. Microbial Ecology in Health and Disease 13 (2001), 25–31.
91. Yarandi, S.S., Peterson, D.A., Treisman, G.J., Moran, T.H., Pasricha, P.J., Modulatory effects of gut microbiota on the central nervous system: How gut could play a role in neuropsychiatric health and diseases. J Neurogastroenterol Motil, 22, 2016, 201.
92. Yassour, M., Lim, M.Y., Sun Yun, H., Tickle, T.L., Sung, J., Song, Y.M., et al. Sub-clinical detection of gut microbial biomarkers of obesity and type 2 diabetes. Genome Medicine, 8, 2016, 17.
93. Yatsunenko, T., Rey, F.E., Manary, M.J., Trehan, I., Dominguez-Bello, M.G., Contreras, M., et al. Human gut microbiome viewed across age and geography. Nature 486 (2012), 222–227.