Combination of short-read, long-read, and optical mapping assemblies reveals large-scale tandem repeat arrays with population genetic implications

Genome Research

Volumn 27, Issue 5, 2017, Pages 697-708

  Weissensteiner, Matthias H ^a,b   Pang, Andy W C ^c   Bunikis, Ignas ^d   Höijer, Ida ^d   Vinnere Petterson, Olga ^d   Suh, Alexander ^a   Wolf, Jochen B W ^a,b  

^a UPPSALA UNIVERSITY   (Sweden)

^b UNIVERSITY OF MUNICH   (Germany)

^c USA   (United States)

^d UPPSALA UNIVERSITY   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

CONTIG; FLUORESCENT DYE;

ANIMAL CELL; ARTICLE; CARRION CROW; COMPARATIVE STUDY; CONSENSUS SEQUENCE; CONSTITUTIVE HETEROCHROMATIN; CONTROLLED STUDY; GENE MAPPING; GENE SEQUENCE; GENETIC VARIABILITY; GENOME; LONG READ SEQUENCE ASSEMBLY; NONHUMAN; POPULATION GENETIC PARAMETERS; POPULATION GENETICS; PRIORITY JOURNAL; SEQUENCE ALIGNMENT; SHORT READ ASSEMBLY; SINGLE MOLECULE OPTICAL MAP; SINGLE MOLECULE REAL TIME SEQUENCING; SINGLE NUCLEOTIDE POLYMORPHISM; TANDEM REPEAT; TELOMERE; ANIMAL; CHROMATIN; CONTIG MAPPING; CORVUS; DNA SEQUENCE; GENETICS; HOMOLOGOUS RECOMBINATION; METABOLISM; PROCEDURES; STANDARDS;

ANIMALS; CHROMATIN; CONTIG MAPPING; CROWS; GENOME; HOMOLOGOUS RECOMBINATION; SEQUENCE ANALYSIS, DNA; TANDEM REPEAT SEQUENCES;

EID: 85019142404     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.215095.116     Document Type: Article

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