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Volumn 14, Issue 7, 2016, Pages 1523-1531

BioNano genome mapping of individual chromosomes supports physical mapping and sequence assembly in complex plant genomes

Author keywords

chromosomes; flow sorting; optical mapping; physical map; sequencing; wheat

Indexed keywords

BACTERIAL ARTIFICIAL CHROMOSOME; BIOTECHNOLOGY; CHROMOSOMAL MAPPING; DNA SEQUENCE; GENETICS; PLANT CHROMOSOME; PLANT GENOME; PROCEDURES; TANDEM REPEAT; WHEAT;

EID: 84975475885     PISSN: 14677644     EISSN: 14677652     Source Type: Journal    
DOI: 10.1111/pbi.12513     Document Type: Article
Times cited : (82)

References (64)
  • 1
    • 0035282892 scopus 로고    scopus 로고
    • The NAF domain defines a novel protein-protein interaction module conserved in Ca2+-regulated kinases
    • Albrecht, V., Ritz, O., Linder, S., Harter, K. and Kudla, J. (2001) The NAF domain defines a novel protein-protein interaction module conserved in Ca2+-regulated kinases. EMBO J. 20, 1051–1063.
    • (2001) EMBO J , vol.20 , pp. 1051-1063
    • Albrecht, V.1    Ritz, O.2    Linder, S.3    Harter, K.4    Kudla, J.5
  • 4
    • 67249141533 scopus 로고    scopus 로고
    • Molecular diversity and gene expression of cotton ERF transcription factors reveal that group IXa members are responsive to jasmonate, ethylene and Xanthomonas
    • Champion, A., Hebrard, E., Parra, B., Bournaud, C., Marmey, P., Tranchant, C. and Nicole, M. (2009) Molecular diversity and gene expression of cotton ERF transcription factors reveal that group IXa members are responsive to jasmonate, ethylene and Xanthomonas. Mol. Plant Pathol. 10, 471–485.
    • (2009) Mol. Plant Pathol. , vol.10 , pp. 471-485
    • Champion, A.1    Hebrard, E.2    Parra, B.3    Bournaud, C.4    Marmey, P.5    Tranchant, C.6    Nicole, M.7
  • 5
    • 84921936327 scopus 로고    scopus 로고
    • The CarERF genes in chickpea (Cicer arietinum L.) and the identification of CarERF116 as abiotic stress responsive transcription factor
    • Deokar, A.A., Kondawar, V., Kohli, D., Aslam, M., Jain, P.K., Karuppayil, S.M., Varshney, R.K. et al. (2015) The CarERF genes in chickpea (Cicer arietinum L.) and the identification of CarERF116 as abiotic stress responsive transcription factor. Funct. Integr. Genomics, 15, 27–46.
    • (2015) Funct. Integr. Genomics , vol.15 , pp. 27-46
    • Deokar, A.A.1    Kondawar, V.2    Kohli, D.3    Aslam, M.4    Jain, P.K.5    Karuppayil, S.M.6    Varshney, R.K.7
  • 7
    • 26944493259 scopus 로고    scopus 로고
    • Virus-induced gene silencing-based functional characterization of genes associated with powdery mildew resistance in barley
    • Hein, I., Barciszewska-Pacak, M., Hrubikova, K., Williamson, S., Dinesen, M., Soenderby, I.E., Sundar, S. et al. (2005) Virus-induced gene silencing-based functional characterization of genes associated with powdery mildew resistance in barley. Plant Physiol. 138, 2155–2164.
    • (2005) Plant Physiol , vol.138 , pp. 2155-2164
    • Hein, I.1    Barciszewska-Pacak, M.2    Hrubikova, K.3    Williamson, S.4    Dinesen, M.5    Soenderby, I.E.6    Sundar, S.7
  • 8
    • 80052500402 scopus 로고    scopus 로고
    • Large-scale transcriptome analysis in chickpea (Cicer arietinum L.), an orphan legume crop of the semi-arid tropics of Asia and Africa
    • Hiremath, P.J., Farmer, A., Cannon, S.B., Woodward, J., Kudapa, H., Tuteja, R., Kumar, A. et al. (2011) Large-scale transcriptome analysis in chickpea (Cicer arietinum L.), an orphan legume crop of the semi-arid tropics of Asia and Africa. Plant Biotechnol. J. 9, 922–931.
    • (2011) Plant Biotechnol. J. , vol.9 , pp. 922-931
    • Hiremath, P.J.1    Farmer, A.2    Cannon, S.B.3    Woodward, J.4    Kudapa, H.5    Tuteja, R.6    Kumar, A.7
  • 9
    • 34249723753 scopus 로고    scopus 로고
    • Overexpression of a type-A response regulator alters rice morphology and cytokinin metabolism
    • Hirose, N., Makita, N., Kojima, M., Kamada-Nobusada, T. and Sakakibara, H. (2007) Overexpression of a type-A response regulator alters rice morphology and cytokinin metabolism. Plant Cell Physiol. 48, 523–539.
    • (2007) Plant Cell Physiol , vol.48 , pp. 523-539
    • Hirose, N.1    Makita, N.2    Kojima, M.3    Kamada-Nobusada, T.4    Sakakibara, H.5
  • 10
    • 0242556837 scopus 로고    scopus 로고
    • Cytosolic HSP90 associates with and modulates the Arabidopsis RPM1 disease resistance protein
    • Hubert, D.A., Tornero, P., Belkhadir, Y., Krishna, P., Takahashi, A., Shirasu, K. and Dangl, J.L. (2003) Cytosolic HSP90 associates with and modulates the Arabidopsis RPM1 disease resistance protein. EMBO J. 22, 5679–5689.
    • (2003) EMBO J , vol.22 , pp. 5679-5689
    • Hubert, D.A.1    Tornero, P.2    Belkhadir, Y.3    Krishna, P.4    Takahashi, A.5    Shirasu, K.6    Dangl, J.L.7
  • 13
    • 84863135476 scopus 로고    scopus 로고
    • A comprehensive transcriptome assembly of pigeonpea (Cajanuscajan L.) using Sanger and second-generation sequencing platforms
    • Kudapa, H., Bharti, A.K., Cannon, S.B., Farmer, A.D., Mulaosmanovic, B., Kramer, R., Bohra, A. et al. (2012) A comprehensive transcriptome assembly of pigeonpea (Cajanuscajan L.) using Sanger and second-generation sequencing platforms. Mol. Plant, 5, 1020–1028.
    • (2012) Mol. Plant , vol.5 , pp. 1020-1028
    • Kudapa, H.1    Bharti, A.K.2    Cannon, S.B.3    Farmer, A.D.4    Mulaosmanovic, B.5    Kramer, R.6    Bohra, A.7
  • 14
    • 84898058216 scopus 로고    scopus 로고
    • Comprehensive transcriptome assembly of chickpea (Cicer arietinum L.) using Sanger and next generation sequencing platforms: Development and applications
    • Kudapa, H., Azam, S., Sharpe, A.G., Taran, B., Li, R., Deonovic, B., Cameron, C. et al. (2014) Comprehensive transcriptome assembly of chickpea (Cicer arietinum L.) using Sanger and next generation sequencing platforms: development and applications. PLoS ONE, 9, e86039.
    • (2014) Plos ONE , vol.9
    • Kudapa, H.1    Azam, S.2    Sharpe, A.G.3    Taran, B.4    Li, R.5    Deonovic, B.6    Cameron, C.7
  • 15
    • 84912014332 scopus 로고    scopus 로고
    • Genome-wide investigation and expression profiling of AP2/ERF transcription factor superfamily in foxtail millet (Setaria italica L.)
    • Lata, C., Mishra, A.K., Muthamilarasan, M., Bonthala, V.S., Khan, Y. and Prasad, M. (2014) Genome-wide investigation and expression profiling of AP2/ERF transcription factor superfamily in foxtail millet (Setaria italica L.). PLoS ONE, 9, e113092.
    • (2014) Plos ONE , vol.9
    • Lata, C.1    Mishra, A.K.2    Muthamilarasan, M.3    Bonthala, V.S.4    Khan, Y.5    Prasad, M.6
  • 16
    • 79956022565 scopus 로고    scopus 로고
    • Tomato RAV transcription factor is a pivotal modulator involved in the AP2/EREBP-mediated defense pathway
    • Li, C.W., Su, R.C., Cheng, C.P., You, S.J., Hsieh, T.H., Chao, T.C. and Chan, M.T. (2011) Tomato RAV transcription factor is a pivotal modulator involved in the AP2/EREBP-mediated defense pathway. Plant Physiol., 156, 213–227.
    • (2011) Plant Physiol , vol.156 , pp. 213-227
    • Li, C.W.1    Su, R.C.2    Cheng, C.P.3    You, S.J.4    Hsieh, T.H.5    Chao, T.C.6    Chan, M.T.7
  • 17
    • 78650271190 scopus 로고    scopus 로고
    • Genomic and transcriptomic analysis of the AP2/ERF superfamily in Vitis vinifera
    • Licausi, F., Giorgi, F.M., Zenoni, S., Osti, F., Pezzotti, M. and Perata, P. (2010) Genomic and transcriptomic analysis of the AP2/ERF superfamily in Vitis vinifera. BMC Genom. 11, 719.
    • (2010) BMC Genom , vol.11 , pp. 719
    • Licausi, F.1    Giorgi, F.M.2    Zenoni, S.3    Osti, F.4    Pezzotti, M.5    Perata, P.6
  • 18
    • 78650644709 scopus 로고    scopus 로고
    • Hsp90 and environmental stress transform the adaptive value of natural genetic variation
    • Lindquist, S. and Jarosz, D.F. (2010) Hsp90 and environmental stress transform the adaptive value of natural genetic variation. Science, 330, 1820–1824.
    • (2010) Science , vol.330 , pp. 1820-1824
    • Lindquist, S.1    Jarosz, D.F.2
  • 19
    • 84893697668 scopus 로고    scopus 로고
    • Genome-wide identification, phylogeny, evolution and expression patterns of AP2/ERF genes and cytokinin response factors in Brassica rapa ssp. Pekinensis
    • Liu, Z., Kong, L., Zhang, M., Lv, Y., Liu, Y., Zou, M., Lu, G. et al. (2013) Genome-wide identification, phylogeny, evolution and expression patterns of AP2/ERF genes and cytokinin response factors in Brassica rapa ssp. pekinensis. PLoS ONE, 8, e83444.
    • (2013) Plos ONE , vol.8
    • Liu, Z.1    Kong, L.2    Zhang, M.3    Lv, Y.4    Liu, Y.5    Zou, M.6    Lu, G.7
  • 21
    • 0242641582 scopus 로고    scopus 로고
    • High throughput virus-induced gene silencing implicates heat shock protein 90 in plant disease resistance
    • Lu, R., Malcuit, I., Moffett, P., Ruiz, M.T., Peart, J., Wu, A.J., Rathjen, J.P. et al. (2003) High throughput virus-induced gene silencing implicates heat shock protein 90 in plant disease resistance. EMBO J. 22, 5690–5699.
    • (2003) EMBO J , vol.22 , pp. 5690-5699
    • Lu, R.1    Malcuit, I.2    Moffett, P.3    Ruiz, M.T.4    Peart, J.5    Wu, A.J.6    Rathjen, J.P.7
  • 22
    • 4544372760 scopus 로고    scopus 로고
    • From endonucleases to transcription factors: Evolution of the AP2 DNA binding domain in plants
    • Magnani, E., Sjolander, K. and Hake, S. (2004) From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell, 16, 2265–2277.
    • (2004) Plant Cell , vol.16 , pp. 2265-2277
    • Magnani, E.1    Sjolander, K.2    Hake, S.3
  • 23
    • 84856606078 scopus 로고    scopus 로고
    • AP2/ERF family transcription factors in plant abiotic stress responses
    • Mizoi, J., Shinozaki, K. and Yamaguchi-Shinozaki, K. (2012) AP2/ERF family transcription factors in plant abiotic stress responses. Biochim. Biophys. Acta, 1819, 86–96.
    • (2012) Biochim. Biophys. Acta , vol.1819 , pp. 86-96
    • Mizoi, J.1    Shinozaki, K.2    Yamaguchi-Shinozaki, K.3
  • 24
    • 84871753961 scopus 로고    scopus 로고
    • GmDREB2A;2, a canonical DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN2-type transcription factor in soybean, is posttranslationally regulated and mediates dehydration-responsive element-dependent gene expression
    • Mizoi, J., Ohori, T., Moriwaki, T., Kidokoro, S., Todaka, D., Maruyama, K., Kusakabe, K. et al. (2013) GmDREB2A;2, a canonical DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN2-type transcription factor in soybean, is posttranslationally regulated and mediates dehydration-responsive element-dependent gene expression. Plant Physiol. 161, 346–361.
    • (2013) Plant Physiol , vol.161 , pp. 346-361
    • Mizoi, J.1    Ohori, T.2    Moriwaki, T.3    Kidokoro, S.4    Todaka, D.5    Maruyama, K.6    Kusakabe, K.7
  • 25
    • 33646832415 scopus 로고    scopus 로고
    • Genome-wide analysis of the ERF gene family in Arabidopsis and rice
    • Nakano, T., Suzuki, K., Fujimura, T. and Shinshi, H. (2006) Genome-wide analysis of the ERF gene family in Arabidopsis and rice. Plant Physiol. 140, 411–432.
    • (2006) Plant Physiol , vol.140 , pp. 411-432
    • Nakano, T.1    Suzuki, K.2    Fujimura, T.3    Shinshi, H.4
  • 26
    • 1242270093 scopus 로고
    • A new technique to screen pigeonpea for resistance to sterility mosaic
    • Nene, Y.L. and Reddy, M.V. (1976) A new technique to screen pigeonpea for resistance to sterility mosaic. Trop. Grain Legume Bull. 5, 23.
    • (1976) Trop. Grain Legume Bull. , vol.5 , pp. 23
    • Nene, Y.L.1    Reddy, M.V.2
  • 27
    • 0034860366 scopus 로고    scopus 로고
    • Repression domains of class II ERF transcriptional repressors share an essential motif for active repression
    • Ohta, M., Matsui, K., Hiratsu, K., Shinshi, H. and Ohme-Takagi, M. (2001) Repression domains of class II ERF transcriptional repressors share an essential motif for active repression. Plant Cell, 13, 1959–1968.
    • (2001) Plant Cell , vol.13 , pp. 1959-1968
    • Ohta, M.1    Matsui, K.2    Hiratsu, K.3    Shinshi, H.4    Ohme-Takagi, M.5
  • 28
    • 33747871666 scopus 로고    scopus 로고
    • Transcription factor families in Arabidopsis: Major progress and outstanding issues for future research
    • Qu, L.J. and Zhu, Y.X. (2006) Transcription factor families in Arabidopsis: major progress and outstanding issues for future research. Curr. Opin. Plant Biol. 9, 544–549.
    • (2006) Curr. Opin. Plant Biol. , vol.9 , pp. 544-549
    • Qu, L.J.1    Zhu, Y.X.2
  • 29
    • 77949483522 scopus 로고    scopus 로고
    • The first set of EST resource for gene discovery and marker development in pigeonpea (Cajanuscajan L.)
    • Raju, N.L., Gnanesh, B.N., Lekha, P., Jayashree, B., Pande, S., Hiremath, P.J., Byregowda, M. et al. (2010) The first set of EST resource for gene discovery and marker development in pigeonpea (Cajanuscajan L.). BMC Plant Biol. 10, 45.
    • (2010) BMC Plant Biol , vol.10 , pp. 45
    • Raju, N.L.1    Gnanesh, B.N.2    Lekha, P.3    Jayashree, B.4    Pande, S.5    Hiremath, P.J.6    Byregowda, M.7
  • 30
    • 77951245022 scopus 로고    scopus 로고
    • The CRF domain defines cytokinin response factor proteins in plants
    • Rashotte, A.M. and Goertzen, L.R. (2010) The CRF domain defines cytokinin response factor proteins in plants. BMC Plant Biol. 10, 74.
    • (2010) BMC Plant Biol , vol.10 , pp. 74
    • Rashotte, A.M.1    Goertzen, L.R.2
  • 31
  • 32
    • 0036290601 scopus 로고    scopus 로고
    • DNA-binding specificity of the ERF/AP2 domain of Arabidopsis DREBs, transcription factors involved in dehydration-and cold-inducible gene expression
    • Sakuma, Y., Liu, Q., Dubouzet, J.G., Abe, H., Shinozaki, K. and Yamaguchi-Shinozaki, K. (2002) DNA-binding specificity of the ERF/AP2 domain of Arabidopsis DREBs, transcription factors involved in dehydration-and cold-inducible gene expression. Biochem. Biophys. Res. Commun. 290, 998–1009.
    • (2002) Biochem. Biophys. Res. Commun. , vol.290 , pp. 998-1009
    • Sakuma, Y.1    Liu, Q.2    Dubouzet, J.G.3    Abe, H.4    Shinozaki, K.5    Yamaguchi-Shinozaki, K.6
  • 33
    • 11844277123 scopus 로고    scopus 로고
    • The HSP90 chaperone complex, an emerging force in plant development and phenotypic plasticity
    • Sangster, T.A. and Queitsch, C. (2005) The HSP90 chaperone complex, an emerging force in plant development and phenotypic plasticity. Curr. Opin. Plant Biol. 8, 86–92.
    • (2005) Curr. Opin. Plant Biol. , vol.8 , pp. 86-92
    • Sangster, T.A.1    Queitsch, C.2
  • 35
    • 84961289718 scopus 로고    scopus 로고
    • Arabidopsis DPB3-1, a DREB2A interactor, specifically enhances heat stress-induced gene expression by forming a heat stress-specific transcriptional complex with NF-Y subunits
    • Sato, H., Mizoi, J., Tanaka, H., Maruyama, K., Qin, F., Osakabe, Y., Morimoto, K. et al. (2014) Arabidopsis DPB3-1, a DREB2A interactor, specifically enhances heat stress-induced gene expression by forming a heat stress-specific transcriptional complex with NF-Y subunits. Plant Cell, 26, 4954–4973.
    • (2014) Plant Cell , vol.26 , pp. 4954-4973
    • Sato, H.1    Mizoi, J.2    Tanaka, H.3    Maruyama, K.4    Qin, F.5    Osakabe, Y.6    Morimoto, K.7
  • 37
    • 78650517765 scopus 로고    scopus 로고
    • Identification, phylogeny, and transcript profiling of ERF family genes during development and abiotic stress treatments in tomato
    • Sharma, M.K., Kumar, R., Solanke, A.U., Sharma, R., Tyagi, A.K. and Sharma, A.K. (2010) Identification, phylogeny, and transcript profiling of ERF family genes during development and abiotic stress treatments in tomato. Mol. Genet. Genom. 284, 455–475.
    • (2010) Mol. Genet. Genom. , vol.284 , pp. 455-475
    • Sharma, M.K.1    Kumar, R.2    Solanke, A.U.3    Sharma, R.4    Tyagi, A.K.5    Sharma, A.K.6
  • 38
    • 84863410173 scopus 로고    scopus 로고
    • New sources of resistance to Fusarium wilt and sterility mosaic disease in a mini-core collection of pigeonpea germplasm
    • Sharma, M., Rathore, A., Mangala, U.N., Ghosh, R., Sharma, S., Upadhyay, H. and Pande, S. (2012) New sources of resistance to Fusarium wilt and sterility mosaic disease in a mini-core collection of pigeonpea germplasm. Eur. J. Plant Pathol. 133, 707–714.
    • (2012) Eur. J. Plant Pathol. , vol.133 , pp. 707-714
    • Sharma, M.1    Rathore, A.2    Mangala, U.N.3    Ghosh, R.4    Sharma, S.5    Upadhyay, H.6    Pande, S.7
  • 39
    • 79951569343 scopus 로고    scopus 로고
    • Gene structures, classification and expression models of the AP2/EREBP transcription factor family in rice
    • Sharoni, A.M., Nuruzzaman, M., Satoh, K., Shimizu, T., Kondoh, H., Sasaya, T., Choi, I.-R. et al. (2011) Gene structures, classification and expression models of the AP2/EREBP transcription factor family in rice. Plant Cell Physiol. 52, 344–360.
    • (2011) Plant Cell Physiol , vol.52 , pp. 344-360
    • Sharoni, A.M.1    Nuruzzaman, M.2    Satoh, K.3    Shimizu, T.4    Kondoh, H.5    Sasaya, T.6    Choi, I.-R.7
  • 40
    • 84862908373 scopus 로고    scopus 로고
    • Solanum lycopersicum cytokinin response factor (SlCRF) genes: Characterization of CRF domain-containing ERF genes in tomato
    • Shi, X., Gupta, S. and Rashotte, A.M. (2012) Solanum lycopersicum cytokinin response factor (SlCRF) genes: characterization of CRF domain-containing ERF genes in tomato. J. Exp. Bot. 63, 973–982.
    • (2012) J. Exp. Bot. , vol.63 , pp. 973-982
    • Shi, X.1    Gupta, S.2    Rashotte, A.M.3
  • 41
    • 33747590336 scopus 로고    scopus 로고
    • Expression and functional roles of the pepper pathogen-induced transcription factor RAV1 in bacterial disease resistance, and drought and salt stress tolerance
    • Sohn, K.H., Lee, S.C., Jung, H.W., Hong, J.K. and Hwang, B.K. (2006) Expression and functional roles of the pepper pathogen-induced transcription factor RAV1 in bacterial disease resistance, and drought and salt stress tolerance. Plant Mol. Biol. 61, 897–915.
    • (2006) Plant Mol. Biol. , vol.61 , pp. 897-915
    • Sohn, K.H.1    Lee, S.C.2    Jung, H.W.3    Hong, J.K.4    Hwang, B.K.5
  • 42
    • 84882488829 scopus 로고    scopus 로고
    • Genome-wide analysis of the AP2/ERF transcription factor superfamily in Chinese cabbage (Brassica rapa ssp. pekinensis)
    • Song, X., Li, Y. and Hou, X. (2013) Genome-wide analysis of the AP2/ERF transcription factor superfamily in Chinese cabbage (Brassica rapa ssp. pekinensis). BMC Genom. 14, 573.
    • (2013) BMC Genom , vol.14 , pp. 573
    • Song, X.1    Li, Y.2    Hou, X.3
  • 43
    • 0141705339 scopus 로고    scopus 로고
    • HSP90 interacts with RAR1 and SGT1, and is essential for RPS2-mediated disease resistance in Arabidopsis
    • Takahashi, A., Casais, C., Ichimura, K. and Shirasu, K. (2003) HSP90 interacts with RAR1 and SGT1, and is essential for RPS2-mediated disease resistance in Arabidopsis. Proc. Natl Acad. Sci. USA, 100, 11777–11782.
    • (2003) Proc. Natl Acad. Sci. USA , vol.100 , pp. 11777-11782
    • Takahashi, A.1    Casais, C.2    Ichimura, K.3    Shirasu, K.4
  • 44
    • 65449136284 scopus 로고    scopus 로고
    • TopHat: Discovering splice junctions with RNA-Seq
    • Trapnell, C., Pachter, L. and Salzberg, S.L. (2009) TopHat: discovering splice junctions with RNA-Seq. Bioinformatics, 25, 1105–1111.
    • (2009) Bioinformatics , vol.25 , pp. 1105-1111
    • Trapnell, C.1    Pachter, L.2    Salzberg, S.L.3
  • 45
    • 77952123055 scopus 로고    scopus 로고
    • Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
    • Trapnell, C., Williams, B.A., Pertea, G., Mortazavi, A., Kwan, G., van Baren, M.J., Salzberg, S.L. et al. (2010) Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. Nat. Biotechnol. 28, 511–515.
    • (2010) Nat. Biotechnol. , vol.28 , pp. 511-515
    • Trapnell, C.1    Williams, B.A.2    Pertea, G.3    Mortazavi, A.4    Kwan, G.5    van Baren, M.J.6    Salzberg, S.L.7
  • 46
    • 70350621072 scopus 로고    scopus 로고
    • DEAR1, a transcriptional repressor of DREB protein that mediates plant defense and freezing stress responses in Arabidopsis
    • Tsutsui, T., Kato, W., Asada, Y., Sako, K., Sato, T., Sonoda, Y., Kidokoro, S. et al. (2009) DEAR1, a transcriptional repressor of DREB protein that mediates plant defense and freezing stress responses in Arabidopsis. J. Plant. Res. 122, 633–643.
    • (2009) J. Plant. Res. , vol.122 , pp. 633-643
    • Tsutsui, T.1    Kato, W.2    Asada, Y.3    Sako, K.4    Sato, T.5    Sonoda, Y.6    Kidokoro, S.7
  • 47
    • 71049166845 scopus 로고    scopus 로고
    • A comprehensive resource of drought-and salinity-responsive ESTs for gene discovery and marker development in chickpea (Cicer arietinum L.)
    • Varshney, R.K., Hiremath, P.J., Lekha, P., Kashiwagi, J., Balaji, J., Deokar, A.A., Vadez, V. et al. (2009) A comprehensive resource of drought-and salinity-responsive ESTs for gene discovery and marker development in chickpea (Cicer arietinum L.). BMC Genom. 10, 523.
    • (2009) BMC Genom , vol.10 , pp. 523
    • Varshney, R.K.1    Hiremath, P.J.2    Lekha, P.3    Kashiwagi, J.4    Balaji, J.5    Deokar, A.A.6    Vadez, V.7
  • 50
    • 84875176954 scopus 로고    scopus 로고
    • Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement
    • Varshney, R.K., Song, C., Saxena, R.K., Azam, S., Yu, S., Sharpe, A.G., Cannon, S. et al. (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nat. Biotechnol. 31, 240–246.
    • (2013) Nat. Biotechnol. , vol.31 , pp. 240-246
    • Varshney, R.K.1    Song, C.2    Saxena, R.K.3    Azam, S.4    Yu, S.5    Sharpe, A.G.6    Cannon, S.7
  • 51
    • 0036256695 scopus 로고    scopus 로고
    • MapChart: Software for the graphical presentation of linkage maps and QTLs
    • Voorrips, R.E. (2002) MapChart: software for the graphical presentation of linkage maps and QTLs. J. Hered. 93, 77–78.
    • (2002) J. Hered. , vol.93 , pp. 77-78
    • Voorrips, R.E.1
  • 52
    • 84906350231 scopus 로고    scopus 로고
    • Identification of ERF genes in peanuts and functional analysis of AhERF008 and AhERF019 in abiotic stress response
    • Wan, L., Wu, Y., Huang, J., Dai, X., Lei, Y., Yan, L., Jiang, H. et al. (2014) Identification of ERF genes in peanuts and functional analysis of AhERF008 and AhERF019 in abiotic stress response. Funct. Integr. Genomics, 14, 467–477.
    • (2014) Funct. Integr. Genomics , vol.14 , pp. 467-477
    • Wan, L.1    Wu, Y.2    Huang, J.3    Dai, X.4    Lei, Y.5    Yan, L.6    Jiang, H.7
  • 53
    • 79959848997 scopus 로고    scopus 로고
    • Molecular analysis of common wheat genes encoding three types of cytosolic heat shock protein 90 (Hsp90): Functional involvement of cytosolic Hsp90s in the control of wheat seedling growth and disease resistance
    • Wang, G.F., Wei, X., Fan, R., Zhou, H., Wang, X., Yu, C., Dong, L. et al. (2011) Molecular analysis of common wheat genes encoding three types of cytosolic heat shock protein 90 (Hsp90): functional involvement of cytosolic Hsp90s in the control of wheat seedling growth and disease resistance. New Phytol. 191, 418–431.
    • (2011) New Phytol , vol.191 , pp. 418-431
    • Wang, G.F.1    Wei, X.2    Fan, R.3    Zhou, H.4    Wang, X.5    Yu, C.6    Dong, L.7
  • 54
    • 13744263749 scopus 로고    scopus 로고
    • Homing into the origin of the AP2 DNA binding domain
    • Wessler, S.R. (2005) Homing into the origin of the AP2 DNA binding domain. Trends Plant Sci. 10, 54–56.
    • (2005) Trends Plant Sci , vol.10 , pp. 54-56
    • Wessler, S.R.1
  • 55
    • 58149361773 scopus 로고    scopus 로고
    • Functions of the ERF transcription factor family in plants
    • Xu, Z.S., Chen, M., Li, L.C. and Ma, Y.Z. (2008) Functions of the ERF transcription factor family in plants. Botany, 86, 969–977.
    • (2008) Botany , vol.86 , pp. 969-977
    • Xu, Z.S.1    Chen, M.2    Li, L.C.3    Ma, Y.Z.4
  • 56
    • 79960144673 scopus 로고    scopus 로고
    • Functions and application of the AP2/ERF transcription factor family in crop improvement
    • Xu, Z.S., Chen, M., Li, L.C. and Ma, Y.Z. (2011) Functions and application of the AP2/ERF transcription factor family in crop improvement. J. Integr. Plant Biol. 53, 570–585.
    • (2011) J. Integr. Plant Biol. , vol.53 , pp. 570-585
    • Xu, Z.S.1    Chen, M.2    Li, L.C.3    Ma, Y.Z.4
  • 57
    • 84871700505 scopus 로고    scopus 로고
    • Heat shock protein 90 in plants: Molecular mechanisms and roles in stress responses
    • Xu, Z.S., Li, Z.Y., Chen, Y., Chen, M., Li, L.C. and Ma, Y.Z. (2012) Heat shock protein 90 in plants: molecular mechanisms and roles in stress responses. Int. J. Mol. Sci. 13, 15706–15723.
    • (2012) Int. J. Mol. Sci. , vol.13 , pp. 15706-15723
    • Xu, Z.S.1    Li, Z.Y.2    Chen, Y.3    Chen, M.4    Li, L.C.5    Ma, Y.Z.6
  • 58
    • 84880830249 scopus 로고    scopus 로고
    • Overexpression of GmHsp90s, a heat shock protein 90 (Hsp90) gene family cloning from soybean, decrease damage of abiotic stresses in Arabidopsis thaliana
    • Xu, J., Xue, C., Xue, D., Zhao, J., Gai, J., Guo, N. and Xing, H. (2013) Overexpression of GmHsp90s, a heat shock protein 90 (Hsp90) gene family cloning from soybean, decrease damage of abiotic stresses in Arabidopsis thaliana. PLoS ONE, 8, e69810.
    • (2013) Plos ONE , vol.8
    • Xu, J.1    Xue, C.2    Xue, D.3    Zhao, J.4    Gai, J.5    Guo, N.6    Xing, H.7
  • 59
    • 62349113530 scopus 로고    scopus 로고
    • Translating Medicago truncatula genomics to crop legumes
    • Young, N.D. and Udvardi, M. (2009) Translating Medicago truncatula genomics to crop legumes. Curr. Opin. Plant Biol. 12, 193–201.
    • (2009) Curr. Opin. Plant Biol. , vol.12 , pp. 193-201
    • Young, N.D.1    Udvardi, M.2
  • 61
    • 39449115394 scopus 로고    scopus 로고
    • I-TASSER server for protein 3D structure prediction
    • Zhang, Y. (2008) I-TASSER server for protein 3D structure prediction. BMC Bioinformatics, 9, 40.
    • (2008) BMC Bioinformatics , vol.9 , pp. 40
    • Zhang, Y.1
  • 62
    • 57149097073 scopus 로고    scopus 로고
    • Phylogeny, gene structures, and expression patterns of the ERF gene family in soybean (Glycine max L.)
    • Zhang, G., Chen, M., Chen, X., Xu, Z., Guan, S., Li, L.C., Li., A. et al. (2008) Phylogeny, gene structures, and expression patterns of the ERF gene family in soybean (Glycine max L.). J. Exp. Bot., 59, 4095–4107.
    • (2008) J. Exp. Bot. , vol.59 , pp. 4095-4107
    • Zhang, G.1    Chen, M.2    Chen, X.3    Xu, Z.4    Guan, S.5    Li, L.C.6    Li, A.7
  • 64
    • 84867506826 scopus 로고    scopus 로고
    • Vascular expression and C-terminal sequence divergence of cytokinin response factors in flowering plants
    • Zwack, P.J., Shi, X., Robinson, B.R., Gupta, S., Compton, M.A., Gerken, D.M., Goertzen, L.R. et al. (2012) Vascular expression and C-terminal sequence divergence of cytokinin response factors in flowering plants. Plant Cell Physiol. 53, 1683–1695.
    • (2012) Plant Cell Physiol , vol.53 , pp. 1683-1695
    • Zwack, P.J.1    Shi, X.2    Robinson, B.R.3    Gupta, S.4    Compton, M.A.5    Gerken, D.M.6    Goertzen, L.R.7


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