메뉴 건너뛰기




Volumn 12, Issue 9, 2016, Pages

Strain Dependent Genetic Networks for Antibiotic-Sensitivity in a Bacterial Pathogen with a Large Pan-Genome

Author keywords

[No Author keywords available]

Indexed keywords

ABC TRANSPORTER A2; ADENOSINE TRIPHOSPHATE PHOSPHORIBOSYLTRANSFERASE; ASPARTATE SEMIALDEHYDE DEHYDROGENASE; CARDIOLIPIN; DAPTOMYCIN; GALACTOSE 1 PHOSPHATE URIDYLYLTRANSFERASE; HEMOLYSIN; LIPOPROTEIN; MEMBRANE PROTEIN; POTASSIUM CHANNEL KCNQ2; PROTEIN TYROSINE KINASE A; ANTIINFECTIVE AGENT;

EID: 84989894424     PISSN: 15537366     EISSN: 15537374     Source Type: Journal    
DOI: 10.1371/journal.ppat.1005869     Document Type: Article
Times cited : (53)

References (104)
  • 1
    • 0036236855 scopus 로고    scopus 로고
    • Effects of amino acid alterations in penicillin-binding proteins (PBPs) 1a, 2b, and 2x on PBP affinities of penicillin, ampicillin, amoxicillin, cefditoren, cefuroxime, cefprozil, and cefaclor in 18 clinical isolates of penicillin-susceptible, -intermediate, and -resistant pneumococci
    • 11959556,.; (): –.; PubMed Central PMCID: PMCPMC127189.
    • Nagai K, Davies TA, Jacobs MR, Appelbaum PC, Effects of amino acid alterations in penicillin-binding proteins (PBPs) 1a, 2b, and 2x on PBP affinities of penicillin, ampicillin, amoxicillin, cefditoren, cefuroxime, cefprozil, and cefaclor in 18 clinical isolates of penicillin-susceptible, -intermediate, and -resistant pneumococci. Antimicrobial agents and chemotherapy. 2002;46(5):1273–80. 11959556; PubMed Central PMCID: PMCPMC127189.
    • (2002) Antimicrobial agents and chemotherapy , vol.46 , Issue.5 , pp. 1273-1280
    • Nagai, K.1    Davies, T.A.2    Jacobs, M.R.3    Appelbaum, P.C.4
  • 2
    • 0034712839 scopus 로고    scopus 로고
    • Inhibition of the expression of penicillin resistance in Streptococcus pneumoniae by inactivation of cell wall muropeptide branching genes
    • 10759563,.; (): –.; PubMed Central PMCID: PMCPMC18328.
    • Filipe SR, Tomasz A, Inhibition of the expression of penicillin resistance in Streptococcus pneumoniae by inactivation of cell wall muropeptide branching genes. Proceedings of the National Academy of Sciences of the United States of America. 2000;97(9):4891–6. doi: 10.1073/pnas.08006769710759563; PubMed Central PMCID: PMCPMC18328.
    • (2000) Proceedings of the National Academy of Sciences of the United States of America , vol.97 , Issue.9 , pp. 4891-4896
    • Filipe, S.R.1    Tomasz, A.2
  • 3
    • 0032815561 scopus 로고    scopus 로고
    • beta-lactam resistance in Streptococcus pneumoniae: penicillin-binding proteins and non-penicillin-binding proteins
    • 10447877,.; (): –.
    • Hakenbeck R, Grebe T, Zahner D, Stock JB, beta-lactam resistance in Streptococcus pneumoniae: penicillin-binding proteins and non-penicillin-binding proteins. Molecular microbiology. 1999;33(4):673–8. 10447877.
    • (1999) Molecular microbiology , vol.33 , Issue.4 , pp. 673-678
    • Hakenbeck, R.1    Grebe, T.2    Zahner, D.3    Stock, J.B.4
  • 4
    • 33845273792 scopus 로고    scopus 로고
    • Mutations in penicillin-binding protein (PBP) genes and in non-PBP genes during selection of penicillin-resistant Streptococcus gordonii
    • 17000741,.; (): –.; PubMed Central PMCID: PMCPMC1693971.
    • Haenni M, Moreillon P, Mutations in penicillin-binding protein (PBP) genes and in non-PBP genes during selection of penicillin-resistant Streptococcus gordonii. Antimicrobial agents and chemotherapy. 2006;50(12):4053–61. doi: 10.1128/AAC.00676-0617000741; PubMed Central PMCID: PMCPMC1693971.
    • (2006) Antimicrobial agents and chemotherapy , vol.50 , Issue.12 , pp. 4053-4061
    • Haenni, M.1    Moreillon, P.2
  • 5
    • 0018338932 scopus 로고
    • The mechanism of the irreversible antimicrobial effects of penicillins: how the beta-lactam antibiotics kill and lyse bacteria
    • .;: –. 1132745480391671723related:q7-sSwNSuA8J.
    • Tomasz A, The mechanism of the irreversible antimicrobial effects of penicillins: how the beta-lactam antibiotics kill and lyse bacteria. Annual Reviews in Microbiology. 1979;33:113–37. 1132745480391671723related:q7-sSwNSuA8J.
    • (1979) Annual Reviews in Microbiology , vol.33 , pp. 113-137
    • Tomasz, A.1
  • 6
    • 0037770202 scopus 로고    scopus 로고
    • Versatility of aminoglycosides and prospects for their future
    • 12857776,.; (): –. 6490603065717625770related:qhMpfhlBE1oJ.
    • Vakulenko S, Mobashery S, Versatility of aminoglycosides and prospects for their future. Clinical microbiology reviews. 2003;16(3):430–50. 6490603065717625770related:qhMpfhlBE1oJ. 12857776
    • (2003) Clinical microbiology reviews , vol.16 , Issue.3 , pp. 430-450
    • Vakulenko, S.1    Mobashery, S.2
  • 7
    • 14844356959 scopus 로고    scopus 로고
    • Rifamycin mode of action, resistance, and biosynthesis
    • 15700959,.;: –. 40861973722518780related:_FSNpL8rkQAJ.
    • Floss H, Yu T-W, Rifamycin mode of action, resistance, and biosynthesis. Chemical reviews. 2005;105:621–32. 40861973722518780related:_FSNpL8rkQAJ. 15700959
    • (2005) Chemical reviews , vol.105 , pp. 621-632
    • Floss, H.1    Yu, T.-W.2
  • 8
    • 38649088911 scopus 로고    scopus 로고
    • Quinolone-mediated bacterial death
    • 17724149,.; (): –. 12080800095493710822related:5mNoFq6fp6cJ.
    • Drlica K, Malik M, Kerns RJ, Zhao X, Quinolone-mediated bacterial death. Antimicrobial agents and chemotherapy. 2008;52(2):385–92. 12080800095493710822related:5mNoFq6fp6cJ. 17724149
    • (2008) Antimicrobial agents and chemotherapy , vol.52 , Issue.2 , pp. 385-392
    • Drlica, K.1    Malik, M.2    Kerns, R.J.3    Zhao, X.4
  • 9
    • 38649088911 scopus 로고    scopus 로고
    • Quinolone-mediated bacterial death
    • . …. 12080800095493710822related:5mNoFq6fp6cJ.
    • Drlica K, Malik M, Kerns R, Quinolone-mediated bacterial death. … agents and chemotherapy. 2008. 12080800095493710822related:5mNoFq6fp6cJ.
    • (2008) agents and chemotherapy
    • Drlica, K.1    Malik, M.2    Kerns, R.3
  • 10
    • 14844356959 scopus 로고    scopus 로고
    • Rifamycin mode of action, resistance, and biosynthesis
    • .. 40861973722518780related:_FSNpL8rkQAJ.
    • Floss H, Yu T-W, Rifamycin mode of action, resistance, and biosynthesis. Chemical reviews. 2005. 40861973722518780related:_FSNpL8rkQAJ.
    • (2005) Chemical reviews
    • Floss, H.1    Yu, T.-W.2
  • 11
    • 0018338932 scopus 로고
    • The mechanism of the irreversible antimicrobial effects of penicillins: how the beta-lactam antibiotics kill and lyse bacteria
    • .. 1132745480391671723related:q7-sSwNSuA8J.
    • Tomasz A, The mechanism of the irreversible antimicrobial effects of penicillins: how the beta-lactam antibiotics kill and lyse bacteria. Annual Reviews in Microbiology. 1979. 1132745480391671723related:q7-sSwNSuA8J.
    • (1979) Annual Reviews in Microbiology
    • Tomasz, A.1
  • 12
    • 0037770202 scopus 로고    scopus 로고
    • Versatility of aminoglycosides and prospects for their future
    • .. 6490603065717625770related:qhMpfhlBE1oJ.
    • Vakulenko S, Mobashery S, Versatility of aminoglycosides and prospects for their future. Clin Microbiol Rev. 2003. 6490603065717625770related:qhMpfhlBE1oJ.
    • (2003) Clin Microbiol Rev
    • Vakulenko, S.1    Mobashery, S.2
  • 13
    • 30944469304 scopus 로고    scopus 로고
    • Mutation discovery in bacterial genomes: metronidazole resistance in Helicobacter pylori
    • 16299480,..; (): –.
    • Albert TJ, Dailidiene D, Dailide G, Norton JE, Kalia A, Richmond TA, et al. Mutation discovery in bacterial genomes: metronidazole resistance in Helicobacter pylori. Nature Methods. 2005;2(12):951–3. 16299480
    • (2005) Nature Methods , vol.2 , Issue.12 , pp. 951-953
    • Albert, T.J.1    Dailidiene, D.2    Dailide, G.3    Norton, J.E.4    Kalia, A.5    Richmond, T.A.6
  • 14
    • 33847650484 scopus 로고    scopus 로고
    • Cumulative effects of several nonenzymatic mechanisms on the resistance of Pseudomonas aeruginosa to aminoglycosides
    • 17194835,.; (): –.
    • El'Garch F, Jeannot K, Hocquet D, Llanes-Barakat C, Plésiat P, Cumulative effects of several nonenzymatic mechanisms on the resistance of Pseudomonas aeruginosa to aminoglycosides. Antimicrobial agents and chemotherapy. 2007;51(3):1016–21. 17194835
    • (2007) Antimicrobial agents and chemotherapy , vol.51 , Issue.3 , pp. 1016-1021
    • El'Garch, F.1    Jeannot, K.2    Hocquet, D.3    Llanes-Barakat, C.4    Plésiat, P.5
  • 15
    • 44649153448 scopus 로고    scopus 로고
    • Rewiring bacteria, two components at a time
    • 18555769,.; (): –.
    • Kohanski MA, Collins JJ, Rewiring bacteria, two components at a time. Cell. 2008;133(6):947–8. doi: 10.1016/j.cell.2008.05.03518555769.
    • (2008) Cell , vol.133 , Issue.6 , pp. 947-948
    • Kohanski, M.A.1    Collins, J.J.2
  • 16
    • 77952884274 scopus 로고    scopus 로고
    • How antibiotics kill bacteria: from targets to networks
    • 20440275,.; (): –.
    • Kohanski MA, Dwyer DJ, Collins JJ, How antibiotics kill bacteria: from targets to networks. Nat Rev Micro. 2010;8(6):423–35. doi: 10.1038/nrmicro233320440275.
    • (2010) Nat Rev Micro , vol.8 , Issue.6 , pp. 423-435
    • Kohanski, M.A.1    Dwyer, D.J.2    Collins, J.J.3
  • 17
    • 79960291267 scopus 로고    scopus 로고
    • Ecology and Evolution as Targets: the Need for Novel Eco-Evo Drugs and Strategies To Fight Antibiotic Resistance
    • 21576439,.; (): –.
    • Baquero F, Coque TM, De La Cruz F, Ecology and Evolution as Targets: the Need for Novel Eco-Evo Drugs and Strategies To Fight Antibiotic Resistance. Antimicrobial agents and chemotherapy. 2011;55(8):3649–60. doi: 10.1128/AAC.00013-1121576439
    • (2011) Antimicrobial agents and chemotherapy , vol.55 , Issue.8 , pp. 3649-3660
    • Baquero, F.1    Coque, T.M.2    De La Cruz, F.3
  • 18
    • 10144242639 scopus 로고    scopus 로고
    • Contributions of individual mechanisms to fluoroquinolone resistance in 36 Escherichia coli strains isolated from humans and animals
    • 8891148,.; (): –.; PubMed Central PMCID: PMCPMC163538.
    • Everett MJ, Jin YF, Ricci V, Piddock LJ, Contributions of individual mechanisms to fluoroquinolone resistance in 36 Escherichia coli strains isolated from humans and animals. Antimicrobial agents and chemotherapy. 1996;40(10):2380–6. 8891148; PubMed Central PMCID: PMCPMC163538.
    • (1996) Antimicrobial agents and chemotherapy , vol.40 , Issue.10 , pp. 2380-2386
    • Everett, M.J.1    Jin, Y.F.2    Ricci, V.3    Piddock, L.J.4
  • 19
    • 0032758083 scopus 로고    scopus 로고
    • Mechanisms of fluoroquinolone resistance: an update 1994–1998
    • 10553699,.;: –.
    • Piddock LJ, Mechanisms of fluoroquinolone resistance: an update 1994–1998. Drugs. 1999;58Suppl 2:11–8. 10553699.
    • (1999) Drugs , vol.58 , pp. 11-18
    • Piddock, L.J.1
  • 20
    • 19544393748 scopus 로고    scopus 로고
    • Biological cost of single and multiple norfloxacin resistance mutations in Escherichia coli implicated in urinary tract infections
    • 15917531,.; (): –.; PubMed Central PMCID: PMCPMC1140522.
    • Komp Lindgren P, Marcusson LL, Sandvang D, Frimodt-Moller N, Hughes D, Biological cost of single and multiple norfloxacin resistance mutations in Escherichia coli implicated in urinary tract infections. Antimicrobial agents and chemotherapy. 2005;49(6):2343–51. doi: 10.1128/AAC.49.6.2343-2351.200515917531; PubMed Central PMCID: PMCPMC1140522.
    • (2005) Antimicrobial agents and chemotherapy , vol.49 , Issue.6 , pp. 2343-2351
    • Komp Lindgren, P.1    Marcusson, L.L.2    Sandvang, D.3    Frimodt-Moller, N.4    Hughes, D.5
  • 21
    • 35848956140 scopus 로고    scopus 로고
    • Contributions of the combined effects of topoisomerase mutations toward fluoroquinolone resistance in Escherichia coli
    • 17682104,.; (): –.; PubMed Central PMCID: PMCPMC2151436.
    • Morgan-Linnell SK, Zechiedrich L, Contributions of the combined effects of topoisomerase mutations toward fluoroquinolone resistance in Escherichia coli. Antimicrobial agents and chemotherapy. 2007;51(11):4205–8. doi: 10.1128/AAC.00647-0717682104; PubMed Central PMCID: PMCPMC2151436.
    • (2007) Antimicrobial agents and chemotherapy , vol.51 , Issue.11 , pp. 4205-4208
    • Morgan-Linnell, S.K.1    Zechiedrich, L.2
  • 24
    • 70049100936 scopus 로고    scopus 로고
    • Interplay in the Selection of Fluoroquinolone Resistance and Bacterial Fitness
    • 19662169,.; ():.
    • Marcusson L, Frimodt-Møller N, Hughes D, Levin B, Interplay in the Selection of Fluoroquinolone Resistance and Bacterial Fitness. PLoS pathogens. 2009;5(8):e1000541. doi: 10.1371/journal.ppat.1000541.t00319662169
    • (2009) PLoS pathogens , vol.5 , Issue.8 , pp. e1000541
    • Marcusson, L.1    Frimodt-Møller, N.2    Hughes, D.3    Levin, B.4
  • 25
    • 33846632742 scopus 로고    scopus 로고
    • Fitness costs of fluoroquinolone resistance in Streptococcus pneumoniae
    • 17116668,.; (): –.; PubMed Central PMCID: PMCPMC1797730.
    • Rozen DE, McGee L, Levin BR, Klugman KP, Fitness costs of fluoroquinolone resistance in Streptococcus pneumoniae. Antimicrobial agents and chemotherapy. 2007;51(2):412–6. doi: 10.1128/AAC.01161-0617116668; PubMed Central PMCID: PMCPMC1797730.
    • (2007) Antimicrobial agents and chemotherapy , vol.51 , Issue.2 , pp. 412-416
    • Rozen, D.E.1    McGee, L.2    Levin, B.R.3    Klugman, K.P.4
  • 26
    • 84877587946 scopus 로고    scopus 로고
    • A fluoroquinolone resistance associated mutation in gyrA Affects DNA supercoiling in Campylobacter jejuni
    • 22919613,..;:.; PubMed Central PMCID: PMCPMC3417464.
    • Han J, Wang Y, Sahin O, Shen Z, Guo B, Shen J, et al. A fluoroquinolone resistance associated mutation in gyrA Affects DNA supercoiling in Campylobacter jejuni. Front Cell Infect Microbiol. 2012;2:21. doi: 10.3389/fcimb.2012.0002122919613; PubMed Central PMCID: PMCPMC3417464.
    • (2012) Front Cell Infect Microbiol , vol.2 , pp. 21
    • Han, J.1    Wang, Y.2    Sahin, O.3    Shen, Z.4    Guo, B.5    Shen, J.6
  • 27
    • 84890417237 scopus 로고    scopus 로고
    • Fitness benefits in fluoroquinolone-resistant Salmonella Typhi in the absence of antimicrobial pressure
    • 24327559,..;:.; PubMed Central PMCID: PMCPMC3857714.
    • Baker S, Duy PT, Nga TV, Dung TT, Phat VV, Chau TT, et al. Fitness benefits in fluoroquinolone-resistant Salmonella Typhi in the absence of antimicrobial pressure. eLife. 2013;2:e01229. doi: 10.7554/eLife.0122924327559; PubMed Central PMCID: PMCPMC3857714.
    • (2013) eLife , vol.2 , pp. e01229
    • Baker, S.1    Duy, P.T.2    Nga, T.V.3    Dung, T.T.4    Phat, V.V.5    Chau, T.T.6
  • 31
    • 84901054480 scopus 로고    scopus 로고
    • Genomic Analyses of Pneumococci from Children with Sickle Cell Disease Expose Host-Specific Bacterial Adaptations and Deficits in Current Interventions
    • 24832453,..; (): –. papers://58864D70-D09B-4A16-B641-1A3EEB7FE0BA/Paper/p22252.
    • Carter R, Wolf J, van Opijnen T, Muller M, Obert C, Burnham C, et al. Genomic Analyses of Pneumococci from Children with Sickle Cell Disease Expose Host-Specific Bacterial Adaptations and Deficits in Current Interventions. Cell Host and Microbe. 2014;15(5):587–99. papers://58864D70-D09B-4A16-B641-1A3EEB7FE0BA/Paper/p22252. doi: 10.1016/j.chom.2014.04.00524832453
    • (2014) Cell Host and Microbe , vol.15 , Issue.5 , pp. 587-599
    • Carter, R.1    Wolf, J.2    van Opijnen, T.3    Muller, M.4    Obert, C.5    Burnham, C.6
  • 32
    • 10944272743 scopus 로고    scopus 로고
    • Antibacterial resistance worldwide: causes, challenges and responses
    • 15577930,.; (): –.
    • Levy SB, Marshall B, Antibacterial resistance worldwide: causes, challenges and responses. Nature medicine. 2004;10(12):S122–9. 15577930
    • (2004) Nature medicine , vol.10 , Issue.12 , pp. S122-S129
    • Levy, S.B.1    Marshall, B.2
  • 33
    • 0345839252 scopus 로고    scopus 로고
    • Where will new antibiotics come from?
    • 15040181,.; (): –.
    • Walsh C, Where will new antibiotics come from?Nature reviews Microbiology. 2003;1(1):65–70. 15040181
    • (2003) Nature reviews Microbiology , vol.1 , Issue.1 , pp. 65-70
    • Walsh, C.1
  • 34
    • 78149445856 scopus 로고    scopus 로고
    • The genomic enzymology of antibiotic resistance
    • 20822442,.;: –.
    • Morar M, Wright GD, The genomic enzymology of antibiotic resistance. Annual Review of Genetics. 2010;44:25–51. doi: 10.1146/annurev-genet-102209-16351720822442
    • (2010) Annual Review of Genetics , vol.44 , pp. 25-51
    • Morar, M.1    Wright, G.D.2
  • 35
    • 0001291428 scopus 로고
    • A resistant pneumococcus
    • Hansman D, Bullen MM, A resistant pneumococcus. Lancet. 1963;ii:264–5.
    • (1963) Lancet , vol.2 , pp. 264-265
    • Hansman, D.1    Bullen, M.M.2
  • 37
    • 17944378619 scopus 로고    scopus 로고
    • High rates of multiple antibiotic resistance in Streptococcus pneumoniae from healthy children living in isolated rural communities: association with cephalosporin use and intrafamilial transmission
    • 11581436,..; (): –.
    • Samore MH, Magill MK, Alder SC, Severina E, Morrison-De Boer L, Lyon JL, et al. High rates of multiple antibiotic resistance in Streptococcus pneumoniae from healthy children living in isolated rural communities: association with cephalosporin use and intrafamilial transmission. Pediatrics. 2001;108(4):856–65. 11581436
    • (2001) Pediatrics , vol.108 , Issue.4 , pp. 856-865
    • Samore, M.H.1    Magill, M.K.2    Alder, S.C.3    Severina, E.4    Morrison-De Boer, L.5    Lyon, J.L.6
  • 40
    • 54149099165 scopus 로고    scopus 로고
    • The rise and fall of bacterial clones: Streptococcus pneumoniae
    • 18923410,.; (): –. papers://58864D70-D09B-4A16-B641-1A3EEB7FE0BA/Paper/p22215.
    • Henriques-Normark B, Blomberg C, Dagerhamn J, Bättig P, Normark S, The rise and fall of bacterial clones: Streptococcus pneumoniae. Nature reviews Microbiology. 2008;6(11):827–37. papers://58864D70-D09B-4A16-B641-1A3EEB7FE0BA/Paper/p22215. doi: 10.1038/nrmicro201118923410
    • (2008) Nature reviews Microbiology , vol.6 , Issue.11 , pp. 827-837
    • Henriques-Normark, B.1    Blomberg, C.2    Dagerhamn, J.3    Bättig, P.4    Normark, S.5
  • 41
    • 76949094947 scopus 로고    scopus 로고
    • The population genetics of commensal Escherichia coli
    • 20157339,.; (): –. papers://58864D70-D09B-4A16-B641-1A3EEB7FE0BA/Paper/p22214.
    • Tenaillon O, Skurnik D, Picard B, Denamur E, The population genetics of commensal Escherichia coli. Nature Reviews Microbiology. 2010;8(3):207–17. papers://58864D70-D09B-4A16-B641-1A3EEB7FE0BA/Paper/p22214. doi: 10.1038/nrmicro229820157339
    • (2010) Nature Reviews Microbiology , vol.8 , Issue.3 , pp. 207-217
    • Tenaillon, O.1    Skurnik, D.2    Picard, B.3    Denamur, E.4
  • 42
    • 77958580152 scopus 로고    scopus 로고
    • Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species
    • 21034474,..; ():. papers://58864D70-D09B-4A16-B641-1A3EEB7FE0BA/Paper/p22209.
    • Donati C, Hiller NL, Tettelin H, Muzzi A, Croucher NJ, Angiuoli SV, et al. Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species. Genome biology. 2010;11(10):R107. papers://58864D70-D09B-4A16-B641-1A3EEB7FE0BA/Paper/p22209. doi: 10.1186/gb-2010-11-10-r10721034474
    • (2010) Genome biology , vol.11 , Issue.10 , pp. R107
    • Donati, C.1    Hiller, N.L.2    Tettelin, H.3    Muzzi, A.4    Croucher, N.J.5    Angiuoli, S.V.6
  • 43
    • 36549020646 scopus 로고    scopus 로고
    • Comparative Genomic Analyses of Seventeen Streptococcus pneumoniae Strains: Insights into the Pneumococcal Supragenome
    • 17675389,..; (): –. papers://58864D70-D09B-4A16-B641-1A3EEB7FE0BA/Paper/p22210.
    • Hiller N, Janto B, Hogg J, Boissy R, Yu S, Powell E, et al. Comparative Genomic Analyses of Seventeen Streptococcus pneumoniae Strains: Insights into the Pneumococcal Supragenome. Journal of bacteriology. 2007;189(22):8186–95. papers://58864D70-D09B-4A16-B641-1A3EEB7FE0BA/Paper/p22210. 17675389
    • (2007) Journal of bacteriology , vol.189 , Issue.22 , pp. 8186-8195
    • Hiller, N.1    Janto, B.2    Hogg, J.3    Boissy, R.4    Yu, S.5    Powell, E.6
  • 45
    • 34249041230 scopus 로고    scopus 로고
    • Exploring genetic interactions and networks with yeast
    • 17510664,.; (): –.
    • Boone C, Bussey H, Andrews B, Exploring genetic interactions and networks with yeast. Nat Rev Genet. 2007;8(6):437–49. doi: 10.1038/nrg208517510664
    • (2007) Nat Rev Genet , vol.8 , Issue.6 , pp. 437-449
    • Boone, C.1    Bussey, H.2    Andrews, B.3
  • 46
    • 70349611730 scopus 로고    scopus 로고
    • Tn-seq: high-throughput parallel sequencing for fitness and genetic interaction studies in microorganisms
    • 19767758,.; (): –.
    • van Opijnen T, Bodi KL, Camilli A, Tn-seq: high-throughput parallel sequencing for fitness and genetic interaction studies in microorganisms. Nature Methods. 2009;6(10):767–72. doi: 10.1038/nmeth.137719767758
    • (2009) Nature Methods , vol.6 , Issue.10 , pp. 767-772
    • van Opijnen, T.1    Bodi, K.L.2    Camilli, A.3
  • 47
    • 84864590175 scopus 로고    scopus 로고
    • Control of Virulence by Small RNAs in Streptococcus pneumoniae
    • 22807675,..; ():.
    • Mann B, van Opijnen T, Wang J, Obert C, Wang Y-D, Carter R, et al. Control of Virulence by Small RNAs in Streptococcus pneumoniae. PLoS pathogens. 2012;8(7):e1002788. doi: 10.1371/journal.ppat.100278822807675
    • (2012) PLoS pathogens , vol.8 , Issue.7 , pp. e1002788
    • Mann, B.1    van Opijnen, T.2    Wang, J.3    Obert, C.4    Wang, Y.-D.5    Carter, R.6
  • 48
    • 84870479250 scopus 로고    scopus 로고
    • A fine scale phenotype-genotype virulence map of a bacterial pathogen
    • 22826510,.; (): –.
    • van Opijnen T, Camilli A, A fine scale phenotype-genotype virulence map of a bacterial pathogen. Genome Res. 2012;22(12):2541–51. doi: 10.1101/gr.137430.11222826510
    • (2012) Genome Res , vol.22 , Issue.12 , pp. 2541-2551
    • van Opijnen, T.1    Camilli, A.2
  • 49
    • 84879413726 scopus 로고    scopus 로고
    • Transposon insertion sequencing: a new tool for systems-level analysis of microorganisms
    • 23712350,.;: –.
    • van Opijnen T, Camilli A, Transposon insertion sequencing: a new tool for systems-level analysis of microorganisms. Nature Reviews Microbiology. 2013;11:435–42. doi: 10.1038/nrmicro303323712350
    • (2013) Nature Reviews Microbiology , vol.11 , pp. 435-442
    • van Opijnen, T.1    Camilli, A.2
  • 50
    • 78650475398 scopus 로고    scopus 로고
    • Phenotypic landscape of a bacterial cell
    • 21185072,..; (): –.
    • Nichols RJ, Sen S, Choo YJ, Beltrao P, Zietek M, Chaba R, et al. Phenotypic landscape of a bacterial cell. Cell. 2011;144(1):143–56. doi: 10.1016/j.cell.2010.11.05221185072.
    • (2011) Cell , vol.144 , Issue.1 , pp. 143-156
    • Nichols, R.J.1    Sen, S.2    Choo, Y.J.3    Beltrao, P.4    Zietek, M.5    Chaba, R.6
  • 52
    • 50249172242 scopus 로고    scopus 로고
    • Determination of antibiotic hypersensitivity among 4,000 single-gene-knockout mutants of Escherichia coli
    • 18621901,..; (): –.; PubMed Central PMCID: PMC2519525.
    • Tamae C, Liu A, Kim K, Sitz D, Hong J, Becket E, et al. Determination of antibiotic hypersensitivity among 4,000 single-gene-knockout mutants of Escherichia coli. Journal of bacteriology. 2008;190(17):5981–8. doi: 10.1128/JB.01982-0718621901; PubMed Central PMCID: PMC2519525.
    • (2008) Journal of bacteriology , vol.190 , Issue.17 , pp. 5981-5988
    • Tamae, C.1    Liu, A.2    Kim, K.3    Sitz, D.4    Hong, J.5    Becket, E.6
  • 53
    • 57049167197 scopus 로고    scopus 로고
    • Complex ciprofloxacin resistome revealed by screening a Pseudomonas aeruginosa mutant library for altered susceptibility
    • 18824609,.; (): –.
    • Breidenstein EB, Khaira BK, Wiegand I, Overhage J, Hancock RE, Complex ciprofloxacin resistome revealed by screening a Pseudomonas aeruginosa mutant library for altered susceptibility. Antimicrobial agents and chemotherapy. 2008;52(12):4486–91. doi: 10.1128/AAC.00222-0818824609
    • (2008) Antimicrobial agents and chemotherapy , vol.52 , Issue.12 , pp. 4486-4491
    • Breidenstein, E.B.1    Khaira, B.K.2    Wiegand, I.3    Overhage, J.4    Hancock, R.E.5
  • 54
    • 57049100540 scopus 로고    scopus 로고
    • Novel genetic determinants of low-level aminoglycoside resistance in Pseudomonas aeruginosa
    • 18824604,..; (): –.
    • Schurek KN, Marr AK, Taylor PK, Wiegand I, Semenec L, Khaira BK, et al. Novel genetic determinants of low-level aminoglycoside resistance in Pseudomonas aeruginosa. Antimicrobial agents and chemotherapy. 2008;52(12):4213–9. doi: 10.1128/AAC.00507-0818824604
    • (2008) Antimicrobial agents and chemotherapy , vol.52 , Issue.12 , pp. 4213-4219
    • Schurek, K.N.1    Marr, A.K.2    Taylor, P.K.3    Wiegand, I.4    Semenec, L.5    Khaira, B.K.6
  • 55
    • 66249098133 scopus 로고    scopus 로고
    • Genetic Architecture of Intrinsic Antibiotic Susceptibility
    • 19462005,.; ():.
    • Girgis H, Hottes A, Tavazoie S, Genetic Architecture of Intrinsic Antibiotic Susceptibility. PloS one. 2009;4(5):e5629. doi: 10.1371/journal.pone.000562919462005
    • (2009) PloS one , vol.4 , Issue.5 , pp. e5629
    • Girgis, H.1    Hottes, A.2    Tavazoie, S.3
  • 56
    • 84865425113 scopus 로고    scopus 로고
    • Daptomycin-mediated reorganization of membrane architecture causes mislocalization of essential cell division proteins
    • 22661688,.; (): –.; PubMed Central PMCID: PMCPMC3415520.
    • Pogliano J, Pogliano N, Silverman JA, Daptomycin-mediated reorganization of membrane architecture causes mislocalization of essential cell division proteins. Journal of bacteriology. 2012;194(17):4494–504. doi: 10.1128/JB.00011-1222661688; PubMed Central PMCID: PMCPMC3415520.
    • (2012) Journal of bacteriology , vol.194 , Issue.17 , pp. 4494-4504
    • Pogliano, J.1    Pogliano, N.2    Silverman, J.A.3
  • 57
    • 0041592783 scopus 로고    scopus 로고
    • Correlation of daptomycin bactericidal activity and membrane depolarization in Staphylococcus aureus
    • 12878516,.; (): –.; PubMed Central PMCID: PMCPMC166110.
    • Silverman JA, Perlmutter NG, Shapiro HM, Correlation of daptomycin bactericidal activity and membrane depolarization in Staphylococcus aureus. Antimicrobial agents and chemotherapy. 2003;47(8):2538–44. 12878516; PubMed Central PMCID: PMCPMC166110.
    • (2003) Antimicrobial agents and chemotherapy , vol.47 , Issue.8 , pp. 2538-2544
    • Silverman, J.A.1    Perlmutter, N.G.2    Shapiro, H.M.3
  • 58
    • 3342942636 scopus 로고    scopus 로고
    • Structural transitions as determinants of the action of the calcium-dependent antibiotic daptomycin
    • 15271353,.; (): –.
    • Jung D, Rozek A, Okon M, Hancock RE, Structural transitions as determinants of the action of the calcium-dependent antibiotic daptomycin. Chem Biol. 2004;11(7):949–57. doi: 10.1016/j.chembiol.2004.04.02015271353.
    • (2004) Chem Biol , vol.11 , Issue.7 , pp. 949-957
    • Jung, D.1    Rozek, A.2    Okon, M.3    Hancock, R.E.4
  • 59
    • 65649154706 scopus 로고    scopus 로고
    • Genetic analysis of factors affecting susceptibility of Bacillus subtilis to daptomycin
    • 19164152,.; (): –.; PubMed Central PMCID: PMCPMC2663116.
    • Hachmann AB, Angert ER, Helmann JD, Genetic analysis of factors affecting susceptibility of Bacillus subtilis to daptomycin. Antimicrobial agents and chemotherapy. 2009;53(4):1598–609. doi: 10.1128/AAC.01329-0819164152; PubMed Central PMCID: PMCPMC2663116.
    • (2009) Antimicrobial agents and chemotherapy , vol.53 , Issue.4 , pp. 1598-1609
    • Hachmann, A.B.1    Angert, E.R.2    Helmann, J.D.3
  • 60
    • 65349126661 scopus 로고    scopus 로고
    • Daptomycin: mechanisms of action and resistance, and biosynthetic engineering
    • 19303806,.; (): –.
    • Baltz RH, Daptomycin: mechanisms of action and resistance, and biosynthetic engineering. Current opinion in chemical biology. 2009;13(2):144–51. doi: 10.1016/j.cbpa.2009.02.03119303806
    • (2009) Current opinion in chemical biology , vol.13 , Issue.2 , pp. 144-151
    • Baltz, R.H.1
  • 61
    • 54549122690 scopus 로고    scopus 로고
    • Consequences of daptomycin-mediated membrane damage in Staphylococcus aureus
    • 18669516,.; (): –.
    • Hobbs JK, Miller K, O'Neill AJ, Chopra I, Consequences of daptomycin-mediated membrane damage in Staphylococcus aureus. The Journal of antimicrobial chemotherapy. 2008;62(5):1003–8. doi: 10.1093/jac/dkn32118669516.
    • (2008) The Journal of antimicrobial chemotherapy , vol.62 , Issue.5 , pp. 1003-1008
    • Hobbs, J.K.1    Miller, K.2    O'Neill, A.J.3    Chopra, I.4
  • 62
    • 0029015398 scopus 로고
    • Virulence of Streptococcus pneumoniae in mice: a standardized method for preparation and frozen storage of the experimental bacterial inoculum
    • 7643743,.; (): –.
    • Aaberge IS, Eng J, Lermark G, Løvik M, Virulence of Streptococcus pneumoniae in mice: a standardized method for preparation and frozen storage of the experimental bacterial inoculum. Microbial pathogenesis. 1995;18(2):141–52. 7643743
    • (1995) Microbial pathogenesis , vol.18 , Issue.2 , pp. 141-152
    • Aaberge, I.S.1    Eng, J.2    Lermark, G.3    Løvik, M.4
  • 63
    • 0035919670 scopus 로고    scopus 로고
    • Complete Genome Sequence of a Virulent Isolate of Streptococcus pneumoniae
    • Tettelin H, Complete Genome Sequence of a Virulent Isolate of Streptococcus pneumoniae. Science. 2001;293(5529):498–506.
    • (2001) Science , vol.293 , Issue.5529 , pp. 498-506
    • Tettelin, H.1
  • 64
    • 0034963344 scopus 로고    scopus 로고
    • Nomenclature of major antimicrobial-resistant clones of Streptococcus pneumoniae defined by the pneumococcal molecular epidemiology network
    • 11427569,..; (): –.
    • McGee L, McDougal L, Zhou J, Spratt BG, Tenover FC, George R, et al. Nomenclature of major antimicrobial-resistant clones of Streptococcus pneumoniae defined by the pneumococcal molecular epidemiology network. Journal of clinical microbiology. 2001;39(7):2565–71. 11427569
    • (2001) Journal of clinical microbiology , vol.39 , Issue.7 , pp. 2565-2571
    • McGee, L.1    McDougal, L.2    Zhou, J.3    Spratt, B.G.4    Tenover, F.C.5    George, R.6
  • 65
    • 0031784290 scopus 로고    scopus 로고
    • Identification of three major clones of multiply antibiotic-resistant Streptococcus pneumoniae in Taiwanese hospitals by multilocus sequence typing
    • 9817864,.; (): –.; PubMed Central PMCID: PMCPMC105231.
    • Shi ZY, Enright MC, Wilkinson P, Griffiths D, Spratt BG, Identification of three major clones of multiply antibiotic-resistant Streptococcus pneumoniae in Taiwanese hospitals by multilocus sequence typing. Journal of clinical microbiology. 1998;36(12):3514–9. 9817864; PubMed Central PMCID: PMCPMC105231.
    • (1998) Journal of clinical microbiology , vol.36 , Issue.12 , pp. 3514-3519
    • Shi, Z.Y.1    Enright, M.C.2    Wilkinson, P.3    Griffiths, D.4    Spratt, B.G.5
  • 66
    • 0242490780 scopus 로고    scopus 로고
    • Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks
    • 14597658,.; (): –.
    • Shannon P, Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks. Genome Research. 2003;13(11):2498–504. doi: 10.1101/gr.123930314597658
    • (2003) Genome Research , vol.13 , Issue.11 , pp. 2498-2504
    • Shannon, P.1
  • 67
    • 77953985332 scopus 로고    scopus 로고
    • Penicillin-binding protein folding is dependent on the PrsA peptidyl-prolyl cis-trans isomerase in Bacillus subtilis
    • 20487272,..; (): –.
    • Hyyrylainen HL, Marciniak BC, Dahncke K, Pietiainen M, Courtin P, Vitikainen M, et al. Penicillin-binding protein folding is dependent on the PrsA peptidyl-prolyl cis-trans isomerase in Bacillus subtilis. Molecular microbiology. 2010;77(1):108–27. doi: 10.1111/j.1365-2958.2010.07188.x20487272.
    • (2010) Molecular microbiology , vol.77 , Issue.1 , pp. 108-127
    • Hyyrylainen, H.L.1    Marciniak, B.C.2    Dahncke, K.3    Pietiainen, M.4    Courtin, P.5    Vitikainen, M.6
  • 68
    • 40549087912 scopus 로고    scopus 로고
    • Transcriptional profiling reveals that daptomycin induces the Staphylococcus aureus cell wall stress stimulon and genes responsive to membrane depolarization
    • 18086846,.; (): –.; PubMed Central PMCID: PMCPMC2258546.
    • Muthaiyan A, Silverman JA, Jayaswal RK, Wilkinson BJ, Transcriptional profiling reveals that daptomycin induces the Staphylococcus aureus cell wall stress stimulon and genes responsive to membrane depolarization. Antimicrobial agents and chemotherapy. 2008;52(3):980–90. doi: 10.1128/AAC.01121-0718086846; PubMed Central PMCID: PMCPMC2258546.
    • (2008) Antimicrobial agents and chemotherapy , vol.52 , Issue.3 , pp. 980-990
    • Muthaiyan, A.1    Silverman, J.A.2    Jayaswal, R.K.3    Wilkinson, B.J.4
  • 69
    • 33644655658 scopus 로고    scopus 로고
    • Correlation between Reduced Daptomycin Susceptibility and Vancomycin Resistance in Vancomycin-Intermediate Staphylococcus aureus
    • 16495273,.; (): –.; PubMed Central PMCID: PMCPMC1426436.
    • Cui L, Tominaga E, Neoh HM, Hiramatsu K, Correlation between Reduced Daptomycin Susceptibility and Vancomycin Resistance in Vancomycin-Intermediate Staphylococcus aureus. Antimicrobial agents and chemotherapy. 2006;50(3):1079–82. doi: 10.1128/AAC.50.3.1079-1082.200616495273; PubMed Central PMCID: PMCPMC1426436.
    • (2006) Antimicrobial agents and chemotherapy , vol.50 , Issue.3 , pp. 1079-1082
    • Cui, L.1    Tominaga, E.2    Neoh, H.M.3    Hiramatsu, K.4
  • 70
    • 84872858655 scopus 로고    scopus 로고
    • Mechanisms of daptomycin resistance in Staphylococcus aureus: role of the cell membrane and cell wall
    • 23215859,.;: –.; PubMed Central PMCID: PMCPMC3556211.
    • Bayer AS, Schneider T, Sahl HG, Mechanisms of daptomycin resistance in Staphylococcus aureus: role of the cell membrane and cell wall. Ann N Y Acad Sci. 2013;1277:139–58. doi: 10.1111/j.1749-6632.2012.06819.x23215859; PubMed Central PMCID: PMCPMC3556211.
    • (2013) Ann N Y Acad Sci , vol.1277 , pp. 139-158
    • Bayer, A.S.1    Schneider, T.2    Sahl, H.G.3
  • 71
    • 84855198122 scopus 로고    scopus 로고
    • Structure and function of the bacterial AAA protease FtsH
    • 21925212,.; (): –.
    • Langklotz S, Baumann U, Narberhaus F, Structure and function of the bacterial AAA protease FtsH. Biochim Biophys Acta. 2012;1823(1):40–8. doi: 10.1016/j.bbamcr.2011.08.01521925212.
    • (2012) Biochim Biophys Acta , vol.1823 , Issue.1 , pp. 40-48
    • Langklotz, S.1    Baumann, U.2    Narberhaus, F.3
  • 72
    • 67651208925 scopus 로고    scopus 로고
    • Adapting the machine: adaptor proteins for Hsp100/Clp and AAA+ proteases
    • 19609260,.; (): –.
    • Kirstein J, Moliere N, Dougan D, Turgay K, Adapting the machine: adaptor proteins for Hsp100/Clp and AAA+ proteases. Nature Reviews Microbiology. 2009;7(8):589–99. doi: 10.1038/nrmicro218519609260
    • (2009) Nature Reviews Microbiology , vol.7 , Issue.8 , pp. 589-599
    • Kirstein, J.1    Moliere, N.2    Dougan, D.3    Turgay, K.4
  • 73
    • 80051814122 scopus 로고    scopus 로고
    • Reduction in membrane phosphatidylglycerol content leads to daptomycin resistance in Bacillus subtilis
    • 21709092,.; (): –.; PubMed Central PMCID: PMCPMC3165287.
    • Hachmann AB, Sevim E, Gaballa A, Popham DL, Antelmann H, Helmann JD, Reduction in membrane phosphatidylglycerol content leads to daptomycin resistance in Bacillus subtilis. Antimicrobial agents and chemotherapy. 2011;55(9):4326–37. doi: 10.1128/AAC.01819-1021709092; PubMed Central PMCID: PMCPMC3165287.
    • (2011) Antimicrobial agents and chemotherapy , vol.55 , Issue.9 , pp. 4326-4337
    • Hachmann, A.B.1    Sevim, E.2    Gaballa, A.3    Popham, D.L.4    Antelmann, H.5    Helmann, J.D.6
  • 74
    • 33744485823 scopus 로고    scopus 로고
    • Genetic changes that correlate with reduced susceptibility to daptomycin in Staphylococcus aureus
    • 16723576,.; (): –.; PubMed Central PMCID: PMCPMC1479123.
    • Friedman L, Alder JD, Silverman JA, Genetic changes that correlate with reduced susceptibility to daptomycin in Staphylococcus aureus. Antimicrobial agents and chemotherapy. 2006;50(6):2137–45. doi: 10.1128/AAC.00039-0616723576; PubMed Central PMCID: PMCPMC1479123.
    • (2006) Antimicrobial agents and chemotherapy , vol.50 , Issue.6 , pp. 2137-2145
    • Friedman, L.1    Alder, J.D.2    Silverman, J.A.3
  • 75
    • 78650634123 scopus 로고    scopus 로고
    • Regulation of mprF by antisense RNA restores daptomycin susceptibility to daptomycin-resistant isolates of Staphylococcus aureus
    • 20974866,..; (): –.; PubMed Central PMCID: PMCPMC3019644.
    • Rubio A, Conrad M, Haselbeck RJ, G CK, Brown-Driver V, Finn J, et al. Regulation of mprF by antisense RNA restores daptomycin susceptibility to daptomycin-resistant isolates of Staphylococcus aureus. Antimicrobial agents and chemotherapy. 2011;55(1):364–7. doi: 10.1128/AAC.00429-1020974866; PubMed Central PMCID: PMCPMC3019644.
    • (2011) Antimicrobial agents and chemotherapy , vol.55 , Issue.1 , pp. 364-367
    • Rubio, A.1    Conrad, M.2    Haselbeck, R.J.3    Brown-Driver, V.4    Finn, J.5
  • 76
    • 67049086887 scopus 로고    scopus 로고
    • Regulation of mprF in daptomycin-nonsusceptible Staphylococcus aureus strains
    • 19289517,..; (): –.; PubMed Central PMCID: PMCPMC2687189.
    • Yang SJ, Xiong YQ, Dunman PM, Schrenzel J, Francois P, Peschel A, et al. Regulation of mprF in daptomycin-nonsusceptible Staphylococcus aureus strains. Antimicrobial agents and chemotherapy. 2009;53(6):2636–7. doi: 10.1128/AAC.01415-0819289517; PubMed Central PMCID: PMCPMC2687189.
    • (2009) Antimicrobial agents and chemotherapy , vol.53 , Issue.6 , pp. 2636-2637
    • Yang, S.J.1    Xiong, Y.Q.2    Dunman, P.M.3    Schrenzel, J.4    Francois, P.5    Peschel, A.6
  • 79
    • 1542570529 scopus 로고    scopus 로고
    • The roles and regulation of potassium in bacteria
    • 14604015,.;: –.
    • Epstein W, The roles and regulation of potassium in bacteria. Prog Nucleic Acid Res Mol Biol. 2003;75:293–320. 14604015.
    • (2003) Prog Nucleic Acid Res Mol Biol , vol.75 , pp. 293-320
    • Epstein, W.1
  • 80
    • 77954414035 scopus 로고    scopus 로고
    • Identification of multiple substrates of the StkP Ser/Thr protein kinase in Streptococcus pneumoniae
    • 20453092,..; (): –.; PubMed Central PMCID: PMCPMC2897338.
    • Novakova L, Bezouskova S, Pompach P, Spidlova P, Saskova L, Weiser J, et al. Identification of multiple substrates of the StkP Ser/Thr protein kinase in Streptococcus pneumoniae. Journal of bacteriology. 2010;192(14):3629–38. doi: 10.1128/JB.01564-0920453092; PubMed Central PMCID: PMCPMC2897338.
    • (2010) Journal of bacteriology , vol.192 , Issue.14 , pp. 3629-3638
    • Novakova, L.1    Bezouskova, S.2    Pompach, P.3    Spidlova, P.4    Saskova, L.5    Weiser, J.6
  • 81
    • 0030313214 scopus 로고    scopus 로고
    • The Probabilistic Basis of Jaccard's Index of Similarity
    • Real R, Vargas JM, The Probabilistic Basis of Jaccard's Index of Similarity. Society of Systematic Biologists. 1996;45(3):380–5.
    • (1996) Society of Systematic Biologists , vol.45 , Issue.3 , pp. 380-385
    • Real, R.1    Vargas, J.M.2
  • 82
    • 0008154951 scopus 로고    scopus 로고
    • Tables of significant values of Jaccard's index of similarity
    • Real R, Tables of significant values of Jaccard's index of similarity. Miscelània Zoològica. 1999;22(1):29–40.
    • (1999) Miscelània Zoològica , vol.22 , Issue.1 , pp. 29-40
    • Real, R.1
  • 83
    • 84888872467 scopus 로고    scopus 로고
    • Using networks to measure similarity between genes: association index selection
    • 24296474,.; (): –.; PubMed Central PMCID: PMCPMC3959882.
    • Fuxman Bass JI, Diallo A, Nelson J, Soto JM, Myers CL, Walhout AJ, Using networks to measure similarity between genes: association index selection. Nat Methods. 2013;10(12):1169–76. doi: 10.1038/nmeth.272824296474; PubMed Central PMCID: PMCPMC3959882.
    • (2013) Nat Methods , vol.10 , Issue.12 , pp. 1169-1176
    • Fuxman Bass, J.I.1    Diallo, A.2    Nelson, J.3    Soto, J.M.4    Myers, C.L.5    Walhout, A.J.6
  • 84
    • 0028154018 scopus 로고
    • Interdependence of K+ and glutamate accumulation during osmotic adaptation of Escherichia coli
    • 7904996,.; (): –.
    • McLaggan D, Naprstek J, Buurman ET, Epstein W, Interdependence of K+ and glutamate accumulation during osmotic adaptation of Escherichia coli. The Journal of biological chemistry. 1994;269(3):1911–7. 7904996.
    • (1994) The Journal of biological chemistry , vol.269 , Issue.3 , pp. 1911-1917
    • McLaggan, D.1    Naprstek, J.2    Buurman, E.T.3    Epstein, W.4
  • 85
    • 33846942977 scopus 로고    scopus 로고
    • Clp ATPases and ClpP proteolytic complexes regulate vital biological processes in low GC, Gram-positive bacteria
    • 17302811,.; (): –.
    • Frees D, Savijoki K, Varmanen P, Ingmer H, Clp ATPases and ClpP proteolytic complexes regulate vital biological processes in low GC, Gram-positive bacteria. Molecular microbiology. 2007;63(5):1285–95. doi: 10.1111/j.1365-2958.2007.05598.x17302811.
    • (2007) Molecular microbiology , vol.63 , Issue.5 , pp. 1285-1295
    • Frees, D.1    Savijoki, K.2    Varmanen, P.3    Ingmer, H.4
  • 86
    • 84863061162 scopus 로고    scopus 로고
    • The role of ClpP in protein expression of Streptococcus pneumoniae
    • 22198546,..; (): –.
    • Zhang Q, Huang Y, Wang H, Xu W, Liu L, Yin Y, et al. The role of ClpP in protein expression of Streptococcus pneumoniae. Curr Microbiol. 2012;64(3):294–9. doi: 10.1007/s00284-011-0060-922198546.
    • (2012) Curr Microbiol , vol.64 , Issue.3 , pp. 294-299
    • Zhang, Q.1    Huang, Y.2    Wang, H.3    Xu, W.4    Liu, L.5    Yin, Y.6
  • 87
    • 37549068524 scopus 로고    scopus 로고
    • Clp-dependent proteolysis down-regulates central metabolic pathways in glucose-starved Bacillus subtilis
    • 17981983,.; (): –.; PubMed Central PMCID: PMCPMC2223743.
    • Gerth U, Kock H, Kusters I, Michalik S, Switzer RL, Hecker M, Clp-dependent proteolysis down-regulates central metabolic pathways in glucose-starved Bacillus subtilis. Journal of bacteriology. 2008;190(1):321–31. doi: 10.1128/JB.01233-0717981983; PubMed Central PMCID: PMCPMC2223743.
    • (2008) Journal of bacteriology , vol.190 , Issue.1 , pp. 321-331
    • Gerth, U.1    Kock, H.2    Kusters, I.3    Michalik, S.4    Switzer, R.L.5    Hecker, M.6
  • 88
    • 84861148391 scopus 로고    scopus 로고
    • Properties and biological role of streptococcal fratricins
    • 22407687,.; (): –.; PubMed Central PMCID: PMCPMC3346361.
    • Berg KH, Biornstad TJ, Johnsborg O, Havarstein LS, Properties and biological role of streptococcal fratricins. Appl Environ Microbiol. 2012;78(10):3515–22. doi: 10.1128/AEM.00098-1222407687; PubMed Central PMCID: PMCPMC3346361.
    • (2012) Appl Environ Microbiol , vol.78 , Issue.10 , pp. 3515-3522
    • Berg, K.H.1    Biornstad, T.J.2    Johnsborg, O.3    Havarstein, L.S.4
  • 89
    • 77952163865 scopus 로고    scopus 로고
    • Pneumococcal CbpD is a murein hydrolase that requires a dual cell envelope binding specificity to kill target cells during fratricide
    • 20384696,..; (): –.
    • Eldholm V, Johnsborg O, Straume D, Ohnstad HS, Berg KH, Hermoso JA, et al. Pneumococcal CbpD is a murein hydrolase that requires a dual cell envelope binding specificity to kill target cells during fratricide. Molecular microbiology. 2010;76(4):905–17. doi: 10.1111/j.1365-2958.2010.07143.x20384696.
    • (2010) Molecular microbiology , vol.76 , Issue.4 , pp. 905-917
    • Eldholm, V.1    Johnsborg, O.2    Straume, D.3    Ohnstad, H.S.4    Berg, K.H.5    Hermoso, J.A.6
  • 90
    • 33645081479 scopus 로고    scopus 로고
    • New insights into the pneumococcal fratricide: relationship to clumping and identification of a novel immunity factor
    • 16430701,.; (): –.
    • Havarstein LS, Martin B, Johnsborg O, Granadel C, Claverys JP, New insights into the pneumococcal fratricide: relationship to clumping and identification of a novel immunity factor. Molecular microbiology. 2006;59(4):1297–307. doi: 10.1111/j.1365-2958.2005.05021.x16430701.
    • (2006) Molecular microbiology , vol.59 , Issue.4 , pp. 1297-1307
    • Havarstein, L.S.1    Martin, B.2    Johnsborg, O.3    Granadel, C.4    Claverys, J.P.5
  • 91
    • 84861805227 scopus 로고    scopus 로고
    • Recent advances in pneumococcal peptidoglycan biosynthesis suggest new vaccine and antimicrobial targets
    • 22280885,.; (): –.; PubMed Central PMCID: PMCPMC3322672.
    • Sham LT, Tsui HC, Land AD, Barendt SM, Winkler ME, Recent advances in pneumococcal peptidoglycan biosynthesis suggest new vaccine and antimicrobial targets. Curr Opin Microbiol. 2012;15(2):194–203. doi: 10.1016/j.mib.2011.12.01322280885; PubMed Central PMCID: PMCPMC3322672.
    • (2012) Curr Opin Microbiol , vol.15 , Issue.2 , pp. 194-203
    • Sham, L.T.1    Tsui, H.C.2    Land, A.D.3    Barendt, S.M.4    Winkler, M.E.5
  • 92
    • 79955543481 scopus 로고    scopus 로고
    • Characterization of mutants deficient in the L,D-carboxypeptidase (DacB) and WalRK (VicRK) regulon, involved in peptidoglycan maturation of Streptococcus pneumoniae serotype 2 strain D39
    • 21378199,.; (): –.; PubMed Central PMCID: PMCPMC3133071.
    • Barendt SM, Sham LT, Winkler ME, Characterization of mutants deficient in the L,D-carboxypeptidase (DacB) and WalRK (VicRK) regulon, involved in peptidoglycan maturation of Streptococcus pneumoniae serotype 2 strain D39. Journal of bacteriology. 2011;193(9):2290–300. doi: 10.1128/JB.01555-1021378199; PubMed Central PMCID: PMCPMC3133071.
    • (2011) Journal of bacteriology , vol.193 , Issue.9 , pp. 2290-2300
    • Barendt, S.M.1    Sham, L.T.2    Winkler, M.E.3
  • 93
    • 85056071662 scopus 로고    scopus 로고
    • The Inactivation of a New Peptidoglycan Hydrolase Pmp23 Leads to Abnormal Septum Formation in Streptococcus pneumoniae
    • 19088920,.;: –.; PubMed Central PMCID: PMCPMC2593039.
    • Pagliero E, Dublet B, Frehel C, Dideberg O, Vernet T, Di Guilmi A, The Inactivation of a New Peptidoglycan Hydrolase Pmp23 Leads to Abnormal Septum Formation in Streptococcus pneumoniae. Open Microbiol J. 2008;2:107–14. doi: 10.2174/187428580080201010719088920; PubMed Central PMCID: PMCPMC2593039.
    • (2008) Open Microbiol J , vol.2 , pp. 107-114
    • Pagliero, E.1    Dublet, B.2    Frehel, C.3    Dideberg, O.4    Vernet, T.5    Di Guilmi, A.6
  • 94
    • 57049134826 scopus 로고    scopus 로고
    • Serial daptomycin selection generates daptomycin-nonsusceptible Staphylococcus aureus strains with a heterogeneous vancomycin-intermediate phenotype
    • 18824611,.; (): –.; PubMed Central PMCID: PMCPMC2592861.
    • Camargo IL, Neoh HM, Cui L, Hiramatsu K, Serial daptomycin selection generates daptomycin-nonsusceptible Staphylococcus aureus strains with a heterogeneous vancomycin-intermediate phenotype. Antimicrobial agents and chemotherapy. 2008;52(12):4289–99. doi: 10.1128/AAC.00417-0818824611; PubMed Central PMCID: PMCPMC2592861.
    • (2008) Antimicrobial agents and chemotherapy , vol.52 , Issue.12 , pp. 4289-4299
    • Camargo, I.L.1    Neoh, H.M.2    Cui, L.3    Hiramatsu, K.4
  • 95
    • 84455170136 scopus 로고    scopus 로고
    • VraSR two-component regulatory system contributes to mprF-mediated decreased susceptibility to daptomycin in in vivo-selected clinical strains of methicillin-resistant Staphylococcus aureus
    • 21986832,..; (): –.; PubMed Central PMCID: PMCPMC3256076.
    • Mehta S, Cuirolo AX, Plata KB, Riosa S, Silverman JA, Rubio A, et al. VraSR two-component regulatory system contributes to mprF-mediated decreased susceptibility to daptomycin in in vivo-selected clinical strains of methicillin-resistant Staphylococcus aureus. Antimicrobial agents and chemotherapy. 2012;56(1):92–102. doi: 10.1128/AAC.00432-1021986832; PubMed Central PMCID: PMCPMC3256076.
    • (2012) Antimicrobial agents and chemotherapy , vol.56 , Issue.1 , pp. 92-102
    • Mehta, S.1    Cuirolo, A.X.2    Plata, K.B.3    Riosa, S.4    Silverman, J.A.5    Rubio, A.6
  • 96
    • 74249096623 scopus 로고    scopus 로고
    • Reduced vancomycin susceptibility in Staphylococcus aureus, including vancomycin-intermediate and heterogeneous vancomycin-intermediate strains: resistance mechanisms, laboratory detection, and clinical implications
    • 20065327,.; (): –.; PubMed Central PMCID: PMCPMC2806658.
    • Howden BP, Davies JK, Johnson PD, Stinear TP, Grayson ML, Reduced vancomycin susceptibility in Staphylococcus aureus, including vancomycin-intermediate and heterogeneous vancomycin-intermediate strains: resistance mechanisms, laboratory detection, and clinical implications. Clinical microbiology reviews. 2010;23(1):99–139. doi: 10.1128/CMR.00042-0920065327; PubMed Central PMCID: PMCPMC2806658.
    • (2010) Clinical microbiology reviews , vol.23 , Issue.1 , pp. 99-139
    • Howden, B.P.1    Davies, J.K.2    Johnson, P.D.3    Stinear, T.P.4    Grayson, M.L.5
  • 97
    • 79960300400 scopus 로고    scopus 로고
    • Daptomycin resistance mechanisms in clinically derived Staphylococcus aureus strains assessed by a combined transcriptomics and proteomics approach
    • 21622973,..; (): –.; PubMed Central PMCID: PMCPMC3133485.
    • Fischer A, Yang SJ, Bayer AS, Vaezzadeh AR, Herzig S, Stenz L, et al. Daptomycin resistance mechanisms in clinically derived Staphylococcus aureus strains assessed by a combined transcriptomics and proteomics approach. The Journal of antimicrobial chemotherapy. 2011;66(8):1696–711. doi: 10.1093/jac/dkr19521622973; PubMed Central PMCID: PMCPMC3133485.
    • (2011) The Journal of antimicrobial chemotherapy , vol.66 , Issue.8 , pp. 1696-1711
    • Fischer, A.1    Yang, S.J.2    Bayer, A.S.3    Vaezzadeh, A.R.4    Herzig, S.5    Stenz, L.6
  • 98
    • 0043166886 scopus 로고    scopus 로고
    • Two-component system VraSR positively modulates the regulation of cell-wall biosynthesis pathway in Staphylococcus aureus
    • 12864861,.; (): –.
    • Kuroda M, Kuroda H, Oshima T, Takeuchi F, Mori H, Hiramatsu K, Two-component system VraSR positively modulates the regulation of cell-wall biosynthesis pathway in Staphylococcus aureus. Molecular microbiology. 2003;49(3):807–21. 12864861.
    • (2003) Molecular microbiology , vol.49 , Issue.3 , pp. 807-821
    • Kuroda, M.1    Kuroda, H.2    Oshima, T.3    Takeuchi, F.4    Mori, H.5    Hiramatsu, K.6
  • 99
    • 80855134793 scopus 로고    scopus 로고
    • PATRIC: the comprehensive bacterial bioinformatics resource with a focus on human pathogenic species
    • 21896772,..; (): –.
    • Gillespie JJ, Wattam AR, Cammer SA, Gabbard JL, Shukla MP, Dalay O, et al. PATRIC: the comprehensive bacterial bioinformatics resource with a focus on human pathogenic species. Infection and immunity. 2011;79(11):4286–98. doi: 10.1128/IAI.00207-1121896772
    • (2011) Infection and immunity , vol.79 , Issue.11 , pp. 4286-4298
    • Gillespie, J.J.1    Wattam, A.R.2    Cammer, S.A.3    Gabbard, J.L.4    Shukla, M.P.5    Dalay, O.6
  • 100
    • 28844482813 scopus 로고    scopus 로고
    • Catabolite control protein A (CcpA) contributes to virulence and regulation of sugar metabolism in Streptococcus pneumoniae
    • 16321938,.; (): –.
    • Iyer R, Baliga NS, Camilli A, Catabolite control protein A (CcpA) contributes to virulence and regulation of sugar metabolism in Streptococcus pneumoniae. Journal of bacteriology. 2005;187(24):8340–9. doi: 10.1128/JB.187.24.8340-8349.200516321938.
    • (2005) Journal of bacteriology , vol.187 , Issue.24 , pp. 8340-8349
    • Iyer, R.1    Baliga, N.S.2    Camilli, A.3
  • 101
    • 84901596450 scopus 로고    scopus 로고
    • Genome-Wide Fitness and Genetic Interactions Determined by Tn-seq, a High-Throughput Massively Parallel Sequencing Method for Microorganisms
    • .;: –. papers://58864D70-D09B-4A16-B641-1A3EEB7FE0BA/Paper/p22298.
    • van Opijnen T, Lazinski DW, Camilli A, Genome-Wide Fitness and Genetic Interactions Determined by Tn-seq, a High-Throughput Massively Parallel Sequencing Method for Microorganisms. Current protocols in molecular biology. 2014;106:7.16.1–7.24. papers://58864D70-D09B-4A16-B641-1A3EEB7FE0BA/Paper/p22298.
    • (2014) Current protocols in molecular biology , vol.106 , pp. 7.16.1-7.24
    • van Opijnen, T.1    Lazinski, D.W.2    Camilli, A.3
  • 102
    • 84938329670 scopus 로고    scopus 로고
    • Genome-Wide Fitness and Genetic Interactions Determined by Tn-seq, a High-Throughput Massively Parallel Sequencing Method for Microorganisms
    • 25641100,.;: –.
    • van Opijnen T, Lazinski DW, Camilli A, Genome-Wide Fitness and Genetic Interactions Determined by Tn-seq, a High-Throughput Massively Parallel Sequencing Method for Microorganisms. Curr Protoc Microbiol. 2015;36:1E 3 1–E 3 24. doi: 10.1002/9780471729259.mc01e03s3625641100.
    • (2015) Curr Protoc Microbiol , vol.36 , pp. 1E 3 1-E 3 24
    • van Opijnen, T.1    Lazinski, D.W.2    Camilli, A.3
  • 103
    • 33745267732 scopus 로고    scopus 로고
    • Effects of Random Mutations in the Human Immunodeficiency Virus Type 1 Transcriptional Promoter on Viral Fitness in Different Host Cell Environments
    • 16775355,.;: –. 3722609299033220181.
    • van Opijnen T, Boerlijst MC, Berkhout B, Effects of Random Mutations in the Human Immunodeficiency Virus Type 1 Transcriptional Promoter on Viral Fitness in Different Host Cell Environments. Journal of Virology. 2006;80:6678–85. 3722609299033220181. 16775355
    • (2006) Journal of Virology , vol.80 , pp. 6678-6685
    • van Opijnen, T.1    Boerlijst, M.C.2    Berkhout, B.3
  • 104
    • 0036008798 scopus 로고    scopus 로고
    • Potassium release, a useful tool for studying antimicrobial peptides
    • 11869799,.; (): –.
    • Orlov DS, Nguyen T, Lehrer RI, Potassium release, a useful tool for studying antimicrobial peptides. J Microbiol Methods. 2002;49(3):325–8. 11869799.
    • (2002) J Microbiol Methods , vol.49 , Issue.3 , pp. 325-328
    • Orlov, D.S.1    Nguyen, T.2    Lehrer, R.I.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.