메뉴 건너뛰기




Volumn 10, Issue 12, 2013, Pages 1169-1176

Using networks to measure similarity between genes: Association index selection

Author keywords

[No Author keywords available]

Indexed keywords

CAENORHABDITIS ELEGANS; COMPUTER PROGRAM; CORRELATION COEFFICIENT; GENE ASSOCIATION INDEX; GENE FUNCTION; GENE INTERACTION; GENE REGULATORY NETWORK; GENETIC ASSOCIATION; GENETIC PARAMETERS; GENETIC SIMILARITY; INTERNET; NERVE CELL; NONHUMAN; PRIORITY JOURNAL; PROTEIN DNA INTERACTION; REVIEW;

EID: 84888872467     PISSN: 15487091     EISSN: 15487105     Source Type: Journal    
DOI: 10.1038/nmeth.2728     Document Type: Review
Times cited : (187)

References (22)
  • 1
    • 0034614678 scopus 로고    scopus 로고
    • Protein interaction mapping in C. Elegans using proteins involved in vulval development
    • Walhout, A.J.M. et al. Protein interaction mapping in C. elegans using proteins involved in vulval development. Science 287, 116-122 (2000).
    • (2000) Science , vol.287 , pp. 116-122
    • Walhout, A.J.M.1
  • 2
    • 0033669189 scopus 로고    scopus 로고
    • A network of protein-Protein interactions in yeast
    • Schwikowski, B., Uetz, P. & Fields, S. A network of protein-protein interactions in yeast. Nat. Biotechnol. 18, 1257-1261 (2000).
    • (2000) Nat. Biotechnol. , vol.18 , pp. 1257-1261
    • Schwikowski, B.1    Uetz, P.2    Fields, S.3
  • 3
    • 75649111192 scopus 로고    scopus 로고
    • The genetic landscape of a cell
    • Costanzo, M. et al. The genetic landscape of a cell. Science 327, 425-431 (2010).
    • (2010) Science , vol.327 , pp. 425-431
    • Costanzo, M.1
  • 5
    • 33845311536 scopus 로고    scopus 로고
    • Unraveling transcription regulatory networks by protein-DNA and protein-protein interaction mapping
    • DOI 10.1101/gr.5321506
    • Walhout, A.J.M. Unraveling transcription regulatory networks by protein-DNA and protein-protein interaction mapping. Genome Res. 16, 1445-1454 (2006). (Pubitemid 44878484)
    • (2006) Genome Research , vol.16 , Issue.12 , pp. 1445-1454
    • Walhout, A.J.M.1
  • 6
    • 84891668199 scopus 로고    scopus 로고
    • Extensive rewiring and complex evolutionary dynamics in a C. Elegans multiparameter transcription factor network
    • Reece-Hoyes, J.S. et al. Extensive rewiring and complex evolutionary dynamics in a C. elegans multiparameter transcription factor network. Mol. Cell 51, 116-127 (2013).
    • (2013) Mol. Cell , vol.51 , pp. 116-127
    • Reece-Hoyes, J.S.1
  • 7
    • 84855929956 scopus 로고    scopus 로고
    • Using the reconstructed genome-Scale human metabolic network to study physiology and pathology
    • Bordbar, A. & Palsson, B.O. Using the reconstructed genome-scale human metabolic network to study physiology and pathology. J. Intern. Med. 271, 131-141 (2012).
    • (2012) J. Intern. Med. , vol.271 , pp. 131-141
    • Bordbar, A.1    Palsson, B.O.2
  • 8
    • 84875737727 scopus 로고    scopus 로고
    • Integration of metabolic and gene regulatory networks modulates the C. Elegans dietary response
    • Watson, E., MacNeil, L.T., Arda, H.E., Zhu, L.J. & Walhout, A.J.M. Integration of metabolic and gene regulatory networks modulates the C. elegans dietary response. Cell 153, 253-266 (2013).
    • (2013) Cell , vol.153 , pp. 253-266
    • Watson, E.1    MacNeil, L.T.2    Arda, H.E.3    Zhu, L.J.4    Walhout, A.J.M.5
  • 9
    • 79955549678 scopus 로고    scopus 로고
    • Elegans essential gene network based on phenotypic profiling of a complex tissue
    • Green, R.A. et al. A high-resolution C. elegans essential gene network based on phenotypic profiling of a complex tissue. Cell 145, 470-482 (2011).
    • (2011) Cell , vol.145 , pp. 470-482
    • Green, R.A.1    Et Al., A.2    High-Resolution, C.3
  • 12
    • 57149116346 scopus 로고    scopus 로고
    • Genome-Scale spatiotemporal analysis of Caenorhabditis elegans microRNA promoter activity
    • Martinez, N.J., Ow, M.C., Reece-Hoyes, J., Ambros, V. & Walhout, A.J. Genome-scale spatiotemporal analysis of Caenorhabditis elegans microRNA promoter activity. Genome Res. 18, 2005-2015 (2008).
    • (2008) Genome Res. , vol.18 , pp. 2005-2015
    • Martinez, N.J.1    Ow, M.C.2    Reece-Hoyes, J.3    Ambros, V.4    Walhout, A.J.5
  • 13
    • 67650594823 scopus 로고    scopus 로고
    • A multiparameter network reveals extensive divergence between C. Elegans bHLH transcription factors
    • Grove, C.A. et al. A multiparameter network reveals extensive divergence between C. elegans bHLH transcription factors. Cell 138, 314-327 (2009).
    • (2009) Cell , vol.138 , pp. 314-327
    • Grove, C.A.1
  • 14
    • 84878693484 scopus 로고    scopus 로고
    • Complex expression dynamics and robustness in C. Elegans insulin networks
    • Ritter, A.D. et al. Complex expression dynamics and robustness in C. elegans insulin networks. Genome Res. 23, 954-965 (2013).
    • (2013) Genome Res. , vol.23 , pp. 954-965
    • Ritter, A.D.1
  • 15
    • 79959898376 scopus 로고    scopus 로고
    • Prioritizing candidate disease genes by network-Based boosting of genome-Wide association data
    • Lee, I., Blom, U.M., Wang, P.I., Shim, J.E. & Marcotte, E.M. Prioritizing candidate disease genes by network-based boosting of genome-wide association data. Genome Res. 21, 1109-1121 (2011).
    • (2011) Genome Res. , vol.21 , pp. 1109-1121
    • Lee, I.1    Blom, U.M.2    Wang, P.I.3    Shim, J.E.4    Marcotte, E.M.5
  • 16
    • 0037199968 scopus 로고    scopus 로고
    • Hierarchical organization of modularity in metabolic networks
    • DOI 10.1126/science.1073374
    • Ravasz, E., Somera, A.L., Mongru, D.A., Oltvai, Z.N. & Barabasi, A.L. Hierarchical organization of modularity in metabolic networks. Science 297, 1551-1555 (2002). (Pubitemid 34971002)
    • (2002) Science , vol.297 , Issue.5586 , pp. 1551-1555
    • Ravasz, E.1    Somera, A.L.2    Mongru, D.A.3    Oltvai, Z.N.4    Barabasi, A.-L.5
  • 22
    • 33751359281 scopus 로고    scopus 로고
    • A scalable method for integration and functional analysis of multiple microarray datasets
    • DOI 10.1093/bioinformatics/btl492
    • Huttenhower, C., Hibbs, M., Myers, C. & Troyanskaya, O.G. A scalable method for integration and functional analysis of multiple microarray datasets. Bioinformatics 22, 2890-2897 (2006). (Pubitemid 44811560)
    • (2006) Bioinformatics , vol.22 , Issue.23 , pp. 2890-2897
    • Huttenhower, C.1    Hibbs, M.2    Myers, C.3    Troyanskaya, O.G.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.