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Volumn 70, Issue , 2016, Pages 45-62

The Role of Microbial Electron Transfer in the Coevolution of the Biosphere and Geosphere

Author keywords

Biogeochemistry; EC1 enzymes; Geosphere biosphere coevolution; Microbial electron transfer; Planetary redox state

Indexed keywords

OXIDOREDUCTASE;

EID: 84986612884     PISSN: 00664227     EISSN: 15453251     Source Type: Book Series    
DOI: 10.1146/annurev-micro-102215-095521     Document Type: Article
Times cited : (73)

References (136)
  • 1
    • 57349112982 scopus 로고    scopus 로고
    • Elements and evolution
    • Anbar AD. 2008. Elements and evolution. Science 322:1481-83
    • (2008) Science , vol.322 , pp. 1481-1483
    • Anbar, A.D.1
  • 2
    • 0037119593 scopus 로고    scopus 로고
    • Proterozoic ocean chemistry and evolution: A bioinorganic bridge
    • Anbar AD, Knoll AH. 2002. Proterozoic ocean chemistry and evolution: a bioinorganic bridge? Science 297:1137-42
    • (2002) Science , vol.297 , pp. 1137-1142
    • Anbar, A.D.1    Knoll, A.H.2
  • 3
    • 1842529302 scopus 로고    scopus 로고
    • Molybdenum isotope evidence for widespread anoxia in mid-Proterozoic oceans
    • Arnold GL, Anbar AD, Barling J,LyonsTW.2004. Molybdenum isotope evidence for widespread anoxia in mid-Proterozoic oceans. Science 304:87-90
    • (2004) Science , vol.304 , pp. 87-90
    • Arnold, G.L.1    Anbar, A.D.2    Barling, J.3    Lyons, T.W.4
  • 4
    • 49449087467 scopus 로고    scopus 로고
    • Microbial contributions to climate change through carbon cycle feedbacks
    • Bardgett RD, Freeman C, Ostle NJ. 2008. Microbial contributions to climate change through carbon cycle feedbacks. ISME J. 2:805-14
    • (2008) ISME J. , vol.2 , pp. 805-814
    • Bardgett, R.D.1    Freeman, C.2    Ostle, N.J.3
  • 6
    • 0003689477 scopus 로고    scopus 로고
    • The Terrestrial Planet Finder (TPF): A NASA origins program to search for habitable planets
    • TPF Sci. Work. Group
    • Beichman CA, Woolf NJ, Lindensmith CA, eds. 1999. The Terrestrial Planet Finder (TPF): a NASA origins program to search for habitable planets. JPL Publ. 99-003, TPF Sci. Work. Group
    • (1999) JPL Publ , pp. 3-99
    • Beichman, C.A.1    Woolf, N.J.2    Lindensmith, C.A.3
  • 7
    • 0031758603 scopus 로고    scopus 로고
    • Algal phylogeny and the origin of land plants
    • Bhattacharya D, Medlin L. 1998. Algal phylogeny and the origin of land plants. Plant Physiol. 116:1:9-15
    • (1998) Plant Physiol. , vol.116 , Issue.1 , pp. 9-15
    • Bhattacharya, D.1    Medlin, L.2
  • 8
    • 77957729177 scopus 로고    scopus 로고
    • Early evolution of photosynthesis
    • Blankenship RE. 2010. Early evolution of photosynthesis. Plant Physiol. 154:434-38
    • (2010) Plant Physiol. , vol.154 , pp. 434-438
    • Blankenship, R.E.1
  • 9
    • 0032031956 scopus 로고    scopus 로고
    • The origin and evolution of oxygenic photosynthesis
    • BlankenshipRE, HartmanH. 1998. The origin and evolution of oxygenic photosynthesis. Trends Biochem. Sci. 23:94-97
    • (1998) Trends Biochem. Sci. , vol.23 , pp. 94-97
    • Blankenship, R.E.1    Hartman, H.2
  • 10
    • 84882527565 scopus 로고    scopus 로고
    • The evolutionary transition from anoxygenic to oxygenic photosynthesis
    • ed. PG Falkowski, AH Knoll Burlington, MA: Academic
    • Blankenship RE, Sadekar S, Raymond J. 2007. The evolutionary transition from anoxygenic to oxygenic photosynthesis. In Evolution of Primary Producers in the Sea, ed. PG Falkowski, AH Knoll, pp. 21-35. Burlington, MA: Academic
    • (2007) Evolution of Primary Producers in the Sea , pp. 21-35
    • Blankenship, R.E.1    Sadekar, S.2    Raymond, J.3
  • 11
    • 84884233367 scopus 로고    scopus 로고
    • New insights into the evolutionary history of biological nitrogen fixation
    • Boyd ES, Peters JW. 2013. New insights into the evolutionary history of biological nitrogen fixation. Front. Microbiol. 4:1-12
    • (2013) Front. Microbiol. , vol.4 , pp. 1-12
    • Boyd, E.S.1    Peters, J.W.2
  • 12
    • 84861138834 scopus 로고    scopus 로고
    • The emergence and early evolution of biological carbon-fixation
    • Braakman R, Smith E. 2012. The emergence and early evolution of biological carbon-fixation. PLOS Comput. Biol. 8:e1002455
    • (2012) PLOS Comput. Biol. , vol.8 , pp. e1002455
    • Braakman, R.1    Smith, E.2
  • 14
    • 0038486929 scopus 로고    scopus 로고
    • An evolutionarily structured universe of protein architecture
    • Caetano-Anollés G, Caetano-Anollés D. 2003. An evolutionarily structured universe of protein architecture. Genome Res. 13:1563-71
    • (2003) Genome Res. , vol.13 , pp. 1563-1571
    • Caetano-Anollés, G.1    Caetano-Anollés, D.2
  • 15
    • 0000518613 scopus 로고
    • Precambrian solution photochemistry, inverse segregation, and banded iron formations
    • Cairns-Smith AG. 1978. Precambrian solution photochemistry, inverse segregation, and banded iron formations. Nature 276:807-8
    • (1978) Nature , vol.276 , pp. 807-808
    • Cairns-Smith, A.G.1
  • 16
    • 0032480974 scopus 로고    scopus 로고
    • A new model for Proterozoic ocean chemistry
    • Canfield DE. 1998. A new model for Proterozoic ocean chemistry. Nature 396:450-53
    • (1998) Nature , vol.396 , pp. 450-453
    • Canfield, D.E.1
  • 17
    • 20744459768 scopus 로고    scopus 로고
    • The early history of atmospheric oxygen: Homage to Robert M. Garrels
    • Canfield DE. 2005. The early history of atmospheric oxygen: homage to Robert M. Garrels. Annu. Rev. Earth Planet. Sci. 33:1-36
    • (2005) Annu. Rev. Earth Planet. Sci. , vol.33 , pp. 1-36
    • Canfield, D.E.1
  • 19
    • 77957744758 scopus 로고    scopus 로고
    • The evolution and future of Earth's nitrogen cycle
    • Canfield DE, Glazer AN, Falkowski PG. 2010. The evolution and future of Earth's nitrogen cycle. Science 330:192-96
    • (2010) Science , vol.330 , pp. 192-196
    • Canfield, D.E.1    Glazer, A.N.2    Falkowski, P.G.3
  • 21
    • 84929645893 scopus 로고    scopus 로고
    • Origin and evolution of water oxidation before the last common ancestor of the Cyanobacteria
    • Cardona T, Murray JW, Rutherford AW. 2015. Origin and evolution of water oxidation before the last common ancestor of the Cyanobacteria. Mol. Bio. Evol. 32:1310-28
    • (2015) Mol. Bio. Evol. , vol.32 , pp. 1310-1328
    • Cardona, T.1    Murray, J.W.2    Rutherford, A.W.3
  • 22
    • 0028239826 scopus 로고
    • Evolution of cytochrome oxidase, an enzyme older than atmospheric oxygen
    • Castresana J, Lübben M, Saraste M, Higgins DG. 1994. Evolution of cytochrome oxidase, an enzyme older than atmospheric oxygen. EMBO J. 13:2516
    • (1994) EMBO J. , vol.13 , pp. 2516
    • Castresana, J.1    Lübben, M.2    Saraste, M.3    Higgins, D.G.4
  • 23
    • 79951476377 scopus 로고    scopus 로고
    • Cupredoxins-A study of how proteins may evolve to use metals for bioenergetic processes
    • Choi M, Davidson VL. 2011. Cupredoxins-A study of how proteins may evolve to use metals for bioenergetic processes. Metallomics 3:140-51
    • (2011) Metallomics , vol.3 , pp. 140-151
    • Choi, M.1    Davidson, V.L.2
  • 25
    • 78650987950 scopus 로고    scopus 로고
    • Rapid evolutionary innovation during an Archaean genetic expansion
    • David LA, Alm EJ. 2011. Rapid evolutionary innovation during an Archaean genetic expansion. Nature 469:93-96
    • (2011) Nature , vol.469 , pp. 93-96
    • David, L.A.1    Alm, E.J.2
  • 26
    • 0001202417 scopus 로고
    • Evolution of the structure of ferredoxin based on living relics of primitive amino acid sequences
    • Dayhoff MO, Eck RV. 1966. Evolution of the structure of ferredoxin based on living relics of primitive amino acid sequences. Science 152:363-66
    • (1966) Science , vol.152 , pp. 363-366
    • Dayhoff, M.O.1    Eck, R.V.2
  • 27
    • 77952999511 scopus 로고    scopus 로고
    • On important stages of geosphere and biosphere evolution
    • New York: Springer
    • DobretsovN, Kolchanov N, Suslov V. 2008. On important stages of geosphere and biosphere evolution. In Biosphere Origin and Evolution, pp. 3-23. New York: Springer
    • (2008) Biosphere Origin and Evolution , pp. 3-23
    • Dobretsov, N.1    Kolchanov, N.2    Suslov, V.3
  • 28
    • 77953789217 scopus 로고    scopus 로고
    • The growing human footprint on coastal and open-ocean biogeochemistry
    • Doney SC. 2010. The growing human footprint on coastal and open-ocean biogeochemistry. Science 328:1512-16
    • (2010) Science , vol.328 , pp. 1512-1516
    • Doney, S.C.1
  • 30
    • 33845230241 scopus 로고    scopus 로고
    • Modern proteomes contain putative imprints of ancient shifts in trace metal geochemistry
    • Dupont CL, Yang S, Palenik B, Bourne PE. 2006. Modern proteomes contain putative imprints of ancient shifts in trace metal geochemistry. PNAS 103:17822-7
    • (2006) PNAS , vol.103 , pp. 17822-17827
    • Dupont, C.L.1    Yang, S.2    Palenik, B.3    Bourne, P.E.4
  • 31
    • 84856753410 scopus 로고    scopus 로고
    • Sergei Winogradsky: A founder of modern microbiology and the first microbial ecologist
    • Dworkin M, Gutnick D. 2012. Sergei Winogradsky: a founder of modern microbiology and the first microbial ecologist. FEMS Microbiol. Rev. 36:364-79
    • (2012) FEMS Microbiol. Rev. , vol.36 , pp. 364-379
    • Dworkin, M.1    Gutnick, D.2
  • 32
    • 84944739223 scopus 로고    scopus 로고
    • Methane metabolism in the archaeal phylum Bathyarchaeota revealed by genome-centric metagenomics
    • Evans PN, Parks DH, Chadwick GL, Robbins SJ, Orphan VJ, et al. 2015. Methane metabolism in the archaeal phylum Bathyarchaeota revealed by genome-centric metagenomics. Science 350:434-38
    • (2015) Science , vol.350 , pp. 434-438
    • Evans, P.N.1    Parks, D.H.2    Chadwick, G.L.3    Robbins, S.J.4    Orphan, V.J.5
  • 33
    • 0034644605 scopus 로고    scopus 로고
    • The global carbon cycle: A test of our knowledge of Earth as a system
    • Falkowski P, Scholes R, Boyle E, Canadell J, Canfield D, et al. 2000. The global carbon cycle: a test of our knowledge of Earth as a system. Science 290:291-96
    • (2000) Science , vol.290 , pp. 291-296
    • Falkowski, P.1    Scholes, R.2    Boyle, E.3    Canadell, J.4    Canfield, D.5
  • 34
    • 44449137093 scopus 로고    scopus 로고
    • The microbial engines that drive Earth's biogeochemical cycles
    • Falkowski PG, Fenchel T, Delong EF. 2008. The microbial engines that drive Earth's biogeochemical cycles. Science 320:1034-39
    • (2008) Science , vol.320 , pp. 1034-1039
    • Falkowski, P.G.1    Fenchel, T.2    Delong, E.F.3
  • 35
    • 47249141583 scopus 로고    scopus 로고
    • Electrons, life and the evolution of Earth's oxygen cycle
    • Falkowski PG, Godfrey LV. 2008. Electrons, life and the evolution of Earth's oxygen cycle. Philos. Trans. R. Soc. B 363:2705-16
    • (2008) Philos. Trans. R. Soc. B , vol.363 , pp. 2705-2716
    • Falkowski, P.G.1    Godfrey, L.V.2
  • 39
    • 0034604452 scopus 로고    scopus 로고
    • Atmospheric influence of Earth's earliest sulfur cycle
    • Farquhar J, Bao H, Thiemens M. 2000. Atmospheric influence of Earth's earliest sulfur cycle. Science 289:756-58
    • (2000) Science , vol.289 , pp. 756-758
    • Farquhar, J.1    Bao, H.2    Thiemens, M.3
  • 40
    • 0032503986 scopus 로고    scopus 로고
    • Primary production of the biosphere: Integrating terrestrial and oceanic components
    • Field CB, Behrenfeld MJ, Randerson JT, Falkowski P. 1998. Primary production of the biosphere: integrating terrestrial and oceanic components. Science 281:237-40
    • (1998) Science , vol.281 , pp. 237-240
    • Field, C.B.1    Behrenfeld, M.J.2    Randerson, J.T.3    Falkowski, P.4
  • 41
    • 33646368396 scopus 로고    scopus 로고
    • Iron-sulfur clusters: Ever-expanding roles
    • Fontecave M. 2006. Iron-sulfur clusters: ever-expanding roles. Nat. Chem. Biol. 2:171-74
    • (2006) Nat. Chem. Biol. , vol.2 , pp. 171-174
    • Fontecave, M.1
  • 43
    • 80053227684 scopus 로고    scopus 로고
    • Alternative pathways of carbon dioxide fixation: Insights into the early evolution of life
    • Fuchs G. 2011. Alternative pathways of carbon dioxide fixation: insights into the early evolution of life? Annu. Rev. Microbiol. 65:631-58
    • (2011) Annu. Rev. Microbiol. , vol.65 , pp. 631-658
    • Fuchs, G.1
  • 45
    • 70349779568 scopus 로고    scopus 로고
    • The cycling and redox state of nitrogen in the Archaean ocean
    • Godfrey LV, Falkowski PG. 2009. The cycling and redox state of nitrogen in the Archaean ocean. Nat. Geosci. 2:725-29
    • (2009) Nat. Geosci. , vol.2 , pp. 725-729
    • Godfrey, L.V.1    Falkowski, P.G.2
  • 46
    • 0003003647 scopus 로고
    • Evolution of heme and chlorophyll
    • ed. V. Bryson,HJ Vogel New York: Academic Press
    • Granick S. 1965. Evolution of heme and chlorophyll. In Evolving Genes Proteins, ed. V. Bryson,HJ Vogel, pp. 67-68. New York: Academic Press
    • (1965) Evolving Genes Proteins , pp. 67-68
    • Granick, S.1
  • 47
    • 38349190507 scopus 로고    scopus 로고
    • An Earth-system perspective of the global nitrogen cycle
    • GruberN,Galloway JN. 2008. An Earth-system perspective of the global nitrogen cycle. Nature 451:293-96
    • (2008) Nature , vol.451 , pp. 293-296
    • Gruber, N.1    Galloway, J.N.2
  • 48
    • 72449157081 scopus 로고    scopus 로고
    • Prebiotic metabolism: Production by mineral photoelectrochemistry of α-ketocarboxylic acids in the reductive tricarboxylic acid cycle
    • Guzman MI, Martin ST. 2009. Prebiotic metabolism: Production by mineral photoelectrochemistry of α-ketocarboxylic acids in the reductive tricarboxylic acid cycle. Astrobiology 9:833-42
    • (2009) Astrobiology , vol.9 , pp. 833-842
    • Guzman, M.I.1    Martin, S.T.2
  • 49
    • 0347585665 scopus 로고    scopus 로고
    • Periodic mid-Cretaceous oceanic anoxic events linked by oscillations of the phosphorus and oxygen biogeochemical cycles
    • Handoh IC, Lenton TM. 2003. Periodic mid-Cretaceous oceanic anoxic events linked by oscillations of the phosphorus and oxygen biogeochemical cycles. Glob. Biogeochem. Cycles 17:1092
    • (2003) Glob. Biogeochem. Cycles , vol.17 , pp. 1092
    • Handoh, I.C.1    Lenton, T.M.2
  • 50
    • 84900515122 scopus 로고    scopus 로고
    • Evolutionary history of redox metal-binding domains across the tree of life
    • Harel A, Bromberg Y, Falkowski PG, Bhattacharya D. 2014. Evolutionary history of redox metal-binding domains across the tree of life. PNAS 111:7042-47
    • (2014) PNAS , vol.111 , pp. 7042-7047
    • Harel, A.1    Bromberg, Y.2    Falkowski, P.G.3    Bhattacharya, D.4
  • 51
    • 84863693264 scopus 로고    scopus 로고
    • TrAnsFuSE refines the search for protein function: Oxidoreductases
    • Harel A, Falkowski P, Bromberg Y. 2012. TrAnsFuSE refines the search for protein function: Oxidoreductases. Integr. Biol. 4:765-77
    • (2012) Integr. Biol. , vol.4 , pp. 765-777
    • Harel, A.1    Falkowski, P.2    Bromberg, Y.3
  • 52
    • 84902361190 scopus 로고    scopus 로고
    • Paleomineralogy of theHadean Eon: A preliminary species list.Am
    • Hazen RM. 2013. Paleomineralogy of theHadean Eon: a preliminary species list.Am. J. Sci. 313:807-43
    • (2013) J. Sci. , vol.313 , pp. 807-843
    • Hazen, R.M.1
  • 54
    • 77955287882 scopus 로고    scopus 로고
    • Mineral surfaces, geochemical complexities, and the origins of life
    • Hazen RM, Sverjensky DA. 2010. Mineral surfaces, geochemical complexities, and the origins of life. Cold Spring Harb. Perspect. Biol. 2:a002162
    • (2010) Cold Spring Harb. Perspect. Biol. , vol.2 , pp. a002162
    • Hazen, R.M.1    Sverjensky, D.A.2
  • 55
    • 33747790905 scopus 로고    scopus 로고
    • The oxygenation of the atmosphere and oceans
    • Holland HD. 2006. The oxygenation of the atmosphere and oceans. Philos. Trans. R. Soc. B 361:903-15
    • (2006) Philos. Trans. R. Soc. B , vol.361 , pp. 903-915
    • Holland, H.D.1
  • 56
    • 0344402097 scopus 로고
    • Ueber das verhalten des blutfarbstoffes im spectrum des sonnenlichtes
    • Hoppe F. 1862. Ueber das verhalten des blutfarbstoffes im spectrum des sonnenlichtes. Virchows Arch. 23:446-49
    • (1862) Virchows Arch. , vol.23 , pp. 446-449
    • Hoppe, F.1
  • 57
    • 84941661864 scopus 로고    scopus 로고
    • Design and fine-tuning redox potentials of metalloproteins involved in electron transfer in bioenergetics
    • Hosseinzadeh P, Lu Y. 2015. Design and fine-tuning redox potentials of metalloproteins involved in electron transfer in bioenergetics. Biochim. Biophys. Acta Bioenerg. 1857:557-81
    • (2015) Biochim. Biophys. Acta Bioenerg. , vol.1857 , pp. 557-581
    • Hosseinzadeh, P.1    Lu, Y.2
  • 58
    • 79953023347 scopus 로고    scopus 로고
    • Beyond the Calvin cycle: Autotrophic carbon fixation in the ocean
    • Hügler M, Sievert SM. 2011. Beyond the Calvin cycle: autotrophic carbon fixation in the ocean. Mar. Sci. 3:261-89
    • (2011) Mar. Sci. , vol.3 , pp. 261-289
    • Hügler, M.1    Sievert, S.M.2
  • 59
    • 70349318376 scopus 로고    scopus 로고
    • Structure is three to ten times more conserved than sequence-a study of structural response in protein cores
    • IllergardK, ArdellDH, Elofsson A. 2009. Structure is three to ten times more conserved than sequence-a study of structural response in protein cores. Proteins 77:499-508
    • (2009) Proteins , vol.77 , pp. 499-508
    • Illergard, K.1    Ardell, D.H.2    Elofsson, A.3
  • 60
    • 33645065589 scopus 로고    scopus 로고
    • Iron-sulphur clusters and the problem with oxygen
    • Imlay JA. 2006. Iron-sulphur clusters and the problem with oxygen. Mol. Microbiol. 59:1073-82
    • (2006) Mol. Microbiol. , vol.59 , pp. 1073-1082
    • Imlay, J.A.1
  • 61
    • 84873878917 scopus 로고    scopus 로고
    • Reactive oxygen species at the oxide/water interface: Formation mechanisms and implications for prebiotic chemistry and the origin of life
    • Jie X, Nita S, Carrick ME, Martin AAS. 2013. Reactive oxygen species at the oxide/water interface: formation mechanisms and implications for prebiotic chemistry and the origin of life. Earth Planet. Sci. Lett. 363:156-67
    • (2013) Earth Planet. Sci. Lett. , vol.363 , pp. 156-167
    • Jie, X.1    Nita, S.2    Carrick, M.E.3    Martin, A.A.S.4
  • 62
    • 84867043272 scopus 로고    scopus 로고
    • Global distribution of microbial abundance and biomass in subseafloor sediment
    • Kallmeyer J, Pockalny R, Adhikari RR, Smith DC, D'Hondt S. 2012. Global distribution of microbial abundance and biomass in subseafloor sediment. PNAS 109:16213-16
    • (2012) PNAS , vol.109 , pp. 16213-16216
    • Kallmeyer, J.1    Pockalny, R.2    Adhikari, R.R.3    Smith, D.C.4    D'Hondt, S.5
  • 66
    • 84878794113 scopus 로고    scopus 로고
    • Discovering the electronic circuit diagram of life: Structural relationships among transition metal binding sites in oxidoreductases
    • Kim JD, Senn S, Harel A, Jelen BI, Falkowski PG. 2013. Discovering the electronic circuit diagram of life: structural relationships among transition metal binding sites in oxidoreductases. Philos. Trans. R. Soc. B 368:20120257
    • (2013) Philos. Trans. R. Soc. B , vol.368 , pp. 20120257
    • Kim, J.D.1    Senn, S.2    Harel, A.3    Jelen, B.I.4    Falkowski, P.G.5
  • 67
    • 84879296357 scopus 로고    scopus 로고
    • Anoxic photochemical oxidation of siderite generates molecular hydrogen and iron oxides
    • Kim JD, Yee N, Nanda V, Falkowski PG. 2013. Anoxic photochemical oxidation of siderite generates molecular hydrogen and iron oxides. PNAS 110:10073-77
    • (2013) PNAS , vol.110 , pp. 10073-10077
    • Kim, J.D.1    Yee, N.2    Nanda, V.3    Falkowski, P.G.4
  • 69
    • 0034810541 scopus 로고    scopus 로고
    • Multiple lateral transfers of dissimilatory sulfite reductase genes between major lineages of sulfate-reducing prokaryotes
    • Klein M, Friedrich M, Roger AJ, Hugenholtz P, Fishbain S, et al. 2001. Multiple lateral transfers of dissimilatory sulfite reductase genes between major lineages of sulfate-reducing prokaryotes. J. Bacteriol. 183:6028-35
    • (2001) J. Bacteriol. , vol.183 , pp. 6028-6035
    • Klein, M.1    Friedrich, M.2    Roger, A.J.3    Hugenholtz, P.4    Fishbain, S.5
  • 71
    • 70349559191 scopus 로고    scopus 로고
    • Anaerobic oxidation of methane: Progress with an unknown process
    • Knittel K, Boetius A. 2009. Anaerobic oxidation of methane: progress with an unknown process. Annu. Rev. Microbiol. 63:311-34
    • (2009) Annu. Rev. Microbiol. , vol.63 , pp. 311-334
    • Knittel, K.1    Boetius, A.2
  • 72
    • 84891643388 scopus 로고    scopus 로고
    • Paleobiological perspectives on early eukaryotic evolution
    • Knoll AH. 2014. Paleobiological perspectives on early eukaryotic evolution. Cold Spring Harb. Perspect. Biol. 6:a016121
    • (2014) Cold Spring Harb. Perspect. Biol. , vol.6 , pp. a016121
    • Knoll, A.H.1
  • 73
    • 33646472273 scopus 로고    scopus 로고
    • A tale of two ferredoxins: Sequence similarity and structural differences
    • Krishna SS, Sadreyev RI, Grishin NV. 2006. A tale of two ferredoxins: sequence similarity and structural differences. BMC Struct. Biol. 6:8
    • (2006) BMC Struct. Biol. , vol.6 , pp. 8
    • Krishna, S.S.1    Sadreyev, R.I.2    Grishin, N.V.3
  • 75
    • 84871587989 scopus 로고    scopus 로고
    • The origin of membrane bioenergetics
    • Lane N, Martin WF. 2012. The origin of membrane bioenergetics. Cell 151:1406-16
    • (2012) Cell , vol.151 , pp. 1406-1416
    • Lane, N.1    Martin, W.F.2
  • 78
    • 84899526712 scopus 로고    scopus 로고
    • Metalloproteins containing cytochrome, iron-sulfur, or copper redox centers
    • Liu J,Chakraborty S, Hosseinzadeh P, Yu Y, Tian S, et al. 2014. Metalloproteins containing cytochrome, iron-sulfur, or copper redox centers. Chem. Rev. 114:4366-469
    • (2014) Chem. Rev. , vol.114 , pp. 4366-4469
    • Liu, J.1    Chakraborty, S.2    Hosseinzadeh, P.3    Yu, Y.4    Tian, S.5
  • 79
    • 80053447047 scopus 로고    scopus 로고
    • Computational prediction of heme-binding residues by exploiting residue interaction network
    • Liu R,Hu J. 2011. Computational prediction of heme-binding residues by exploiting residue interaction network. PLOS ONE 6:e25560
    • (2011) PLOS ONE , vol.6 , pp. e25560
    • Liu, R.1    Hu, J.2
  • 80
    • 0022526191 scopus 로고
    • The autotrophic pathway of acetate synthesis in acetogenic bacteria
    • Ljungdhal LG. 1986. The autotrophic pathway of acetate synthesis in acetogenic bacteria. Annu. Rev. Microbiol. 40:415-50
    • (1986) Annu. Rev. Microbiol. , vol.40 , pp. 415-450
    • Ljungdhal, L.G.1
  • 81
    • 0002645536 scopus 로고
    • Atmospheric homeostasis by and for the biosphere: The gaia hypothesis
    • Lovelock JE, Margulis L. 1974. Atmospheric homeostasis by and for the biosphere: the gaia hypothesis. Tellus 26:1-2
    • (1974) Tellus , vol.26 , pp. 1-2
    • Lovelock, J.E.1    Margulis, L.2
  • 82
    • 0037516636 scopus 로고    scopus 로고
    • Dissimilatorymetal reduction: From early life to bioremediation
    • Lovley DR. 2002. Dissimilatorymetal reduction: from early life to bioremediation.ASMNews 68:231-37
    • (2002) ASMNews , vol.68 , pp. 231-237
    • Lovley, D.R.1
  • 83
    • 84894261996 scopus 로고    scopus 로고
    • The rise of oxygen inEarth's early ocean and atmosphere
    • LyonsTW, Reinhard CT, PlanavskyNJ. 2014. The rise of oxygen inEarth's early ocean and atmosphere. Nature 506:307-15
    • (2014) Nature , vol.506 , pp. 307-315
    • Lyons, T.W.1    Reinhard, C.T.2    Planavsky, N.J.3
  • 84
    • 84988637673 scopus 로고    scopus 로고
    • Geochemistry: A piece of the deep carbon puzzle
    • Manning CE. 2014. Geochemistry: a piece of the deep carbon puzzle. Nat. Geosci. 7:333-34
    • (2014) Nat. Geosci. , vol.7 , pp. 333-334
    • Manning, C.E.1
  • 85
    • 0028585380 scopus 로고
    • Nitrogenous fertilizers: Global distribution of consumption and associated emissions of nitrous oxide and ammonia
    • Matthews E. 1994. Nitrogenous fertilizers: global distribution of consumption and associated emissions of nitrous oxide and ammonia. Glob. Biogeochem. Cycles 8:411-39
    • (1994) Glob. Biogeochem. Cycles , vol.8 , pp. 411-439
    • Matthews, E.1
  • 86
    • 0032032970 scopus 로고    scopus 로고
    • Evolution of porphyrins
    • Mauzerall DC. 1998. Evolution of porphyrins. Clin. Dermatol. 16:195-201
    • (1998) Clin. Dermatol. , vol.16 , pp. 195-201
    • Mauzerall, D.C.1
  • 87
    • 0021403738 scopus 로고
    • Photochemistry of porphyrins: A model for the origin of photosynthesis
    • Mercer-Smith JA, Mauzerall DC. 1984. Photochemistry of porphyrins: a model for the origin of photosynthesis. Photochem. Photobiol. 39:397-405
    • (1984) Photochem. Photobiol. , vol.39 , pp. 397-405
    • Mercer-Smith, J.A.1    Mauzerall, D.C.2
  • 88
    • 36949083936 scopus 로고
    • Coupling of phosphorylation to electron and hydrogen transfer by a chemiosmotic type of mechanism
    • Mitchell P. 1961. Coupling of phosphorylation to electron and hydrogen transfer by a chemiosmotic type of mechanism. Nature 191:144-48
    • (1961) Nature , vol.191 , pp. 144-148
    • Mitchell, P.1
  • 89
    • 0141783892 scopus 로고    scopus 로고
    • Midpoint reduction potentials and heme binding stoichiometries of de novo proteins from designed combinatorial libraries
    • Moffet DA, Foley J, Hecht MH. 2003. Midpoint reduction potentials and heme binding stoichiometries of de novo proteins from designed combinatorial libraries. Biophys. Chem. 105:231-39
    • (2003) Biophys. Chem. , vol.105 , pp. 231-239
    • Moffet, D.A.1    Foley, J.2    Hecht, M.H.3
  • 91
    • 0033543133 scopus 로고    scopus 로고
    • Determination of nonligand amino acids critical to [4Fe-4S] 2+/+ assembly in ferredoxin maquettes
    • Mulholland SE, Gibney BR, Rabanal F, Dutton PL. 1999. Determination of nonligand amino acids critical to [4Fe-4S] 2+/+ assembly in ferredoxin maquettes. Biochemistry 38:10442-48
    • (1999) Biochemistry , vol.38 , pp. 10442-10448
    • Mulholland, S.E.1    Gibney, B.R.2    Rabanal, F.3    Dutton, P.L.4
  • 92
    • 71049128162 scopus 로고    scopus 로고
    • On the origin of life in the zinc world: Validation of the hypothesis on the photosynthesizing zinc sulfide edifices as cradles of life on Earth
    • Mulkidjanian AY, Galperin MY. 2009. On the origin of life in the zinc world: validation of the hypothesis on the photosynthesizing zinc sulfide edifices as cradles of life on Earth. Biol. Dir. 4:27
    • (2009) Biol. Dir. , vol.4 , pp. 27
    • Mulkidjanian, A.Y.1    Galperin, M.Y.2
  • 93
    • 0344099392 scopus 로고    scopus 로고
    • Layered microbial communities and the search for life in the universe
    • Nealson K, Berelson W. 2003. Layered microbial communities and the search for life in the universe. Geomicrobiol. J. 20:451-62
    • (2003) Geomicrobiol. J. , vol.20 , pp. 451-462
    • Nealson, K.1    Berelson, W.2
  • 94
    • 0028132223 scopus 로고
    • Iron andmanganese in anaerobic respiration: Environmental significance, physiology, and regulation
    • Nealson KH, Saffarini D. 1994. Iron andmanganese in anaerobic respiration: environmental significance, physiology, and regulation. Annu. Rev. Microbiol. 48:311-43
    • (1994) Annu. Rev. Microbiol. , vol.48 , pp. 311-343
    • Nealson, K.H.1    Saffarini, D.2
  • 95
    • 0033609333 scopus 로고    scopus 로고
    • Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima
    • Nelson KE, Clayton RA, Gill SR, Gwinn ML, Dodson RJ, et al. 1999. Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima. Nature 399:323-29
    • (1999) Nature , vol.399 , pp. 323-329
    • Nelson, K.E.1    Clayton, R.A.2    Gill, S.R.3    Gwinn, M.L.4    Dodson, R.J.5
  • 97
    • 72449155029 scopus 로고    scopus 로고
    • Hydrothermal focusing of chemical and chemiosmotic energy, supported by delivery of catalytic Fe, Ni, Mo/W, Co, S and Se, forced life to emerge
    • Nitschke W, Russell MJ. 2009. Hydrothermal focusing of chemical and chemiosmotic energy, supported by delivery of catalytic Fe, Ni, Mo/W, Co, S and Se, forced life to emerge. J. Mol. Evol. 69:481-96
    • (2009) J. Mol. Evol. , vol.69 , pp. 481-496
    • Nitschke, W.1    Russell, M.J.2
  • 98
    • 84892594189 scopus 로고    scopus 로고
    • Beating the acetyl coenzyme A-pathway to the origin of life
    • Nitschke W, Russell MJ. 2013. Beating the acetyl coenzyme A-pathway to the origin of life. Philos. Trans. R. Soc. B 368:20120258
    • (2013) Philos. Trans. R. Soc. B , vol.368 , pp. 20120258
    • Nitschke, W.1    Russell, M.J.2
  • 100
    • 0033523919 scopus 로고    scopus 로고
    • Natural engineering principles of electron tunnelling in biological oxidation-reduction
    • Page CC, Moser CC, Chen X, Dutton PL. 1999. Natural engineering principles of electron tunnelling in biological oxidation-reduction. Nature 402:47-52
    • (1999) Nature , vol.402 , pp. 47-52
    • Page, C.C.1    Moser, C.C.2    Chen, X.3    Dutton, P.L.4
  • 101
    • 0142231009 scopus 로고    scopus 로고
    • Mechanism for electron transfer within and between proteins
    • Page CC, Moser CC, Dutton PL. 2003. Mechanism for electron transfer within and between proteins. Curr. Opin. Chem. Biol. 7:551-56
    • (2003) Curr. Opin. Chem. Biol. , vol.7 , pp. 551-556
    • Page, C.C.1    Moser, C.C.2    Dutton, P.L.3
  • 102
    • 38949180351 scopus 로고    scopus 로고
    • Rethinking early Earth phosphorus geochemistry
    • Pasek MA. 2008. Rethinking early Earth phosphorus geochemistry. PNAS 105:853-58
    • (2008) PNAS , vol.105 , pp. 853-858
    • Pasek, M.A.1
  • 103
    • 0032081719 scopus 로고    scopus 로고
    • Meeting the biospheres: On the translations of Vernadsky's work
    • PiquerasM. 1998. Meeting the biospheres: on the translations of Vernadsky's work. Int. Microbiol. 1:165-70
    • (1998) Int. Microbiol. , vol.1 , pp. 165-170
    • Piqueras, M.1
  • 104
    • 84873739311 scopus 로고    scopus 로고
    • The SILVA ribosomal RNA gene database project: Improved data processing and web-based tools
    • Quast C, Pruesse E, Yilmaz P, Gerken J, Schweer T, et al. 2012. The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. Nucleic Acids Res. 41:D590-96
    • (2012) Nucleic Acids Res. , vol.41 , pp. D590-D596
    • Quast, C.1    Pruesse, E.2    Yilmaz, P.3    Gerken, J.4    Schweer, T.5
  • 105
    • 33748630485 scopus 로고    scopus 로고
    • Metals and their scaffolds to promote difficult enzymatic reactions
    • Ragsdale SW. 2006. Metals and their scaffolds to promote difficult enzymatic reactions. Chem. Rev. 106:3317-37
    • (2006) Chem. Rev. , vol.106 , pp. 3317-3337
    • Ragsdale, S.W.1
  • 106
    • 41349119857 scopus 로고    scopus 로고
    • Enzymology of theWood-Ljungdahl pathway of acetogenesis
    • Ragsdale SW. 2008. Enzymology of theWood-Ljungdahl pathway of acetogenesis. Ann. N. Y. Acad. Sci. 1125:129-36
    • (2008) Ann. N. Y. Acad. Sci. , vol.1125 , pp. 129-136
    • Ragsdale, S.W.1
  • 107
    • 33645211903 scopus 로고    scopus 로고
    • The effect of oxygen on biochemical networks and the evolution of complex life
    • Raymond J, Segre D. 2006. The effect of oxygen on biochemical networks and the evolution of complex life. Science 311:1764-67
    • (2006) Science , vol.311 , pp. 1764-1767
    • Raymond, J.1    Segre, D.2
  • 108
    • 0038670302 scopus 로고    scopus 로고
    • The interface between the biological and inorganic worlds: Iron-sulfur metalloclusters
    • Rees DC, Howard JB. 2003. The interface between the biological and inorganic worlds: iron-sulfur metalloclusters. Science 300:929-31
    • (2003) Science , vol.300 , pp. 929-931
    • Rees, D.C.1    Howard, J.B.2
  • 110
    • 0034015380 scopus 로고    scopus 로고
    • Bacterial respiration: A flexible process for a changing environment
    • Richardson DJ. 2000. Bacterial respiration: a flexible process for a changing environment. Microbiology 146:551-71
    • (2000) Microbiology , vol.146 , pp. 551-571
    • Richardson, D.J.1
  • 111
    • 0034943157 scopus 로고    scopus 로고
    • Biological formation of volatile phosphorus compounds
    • Roels J, VerstraeteW. 2001. Biological formation of volatile phosphorus compounds. Bioresour. Technol. 79:243-50
    • (2001) Bioresour. Technol. , vol.79 , pp. 243-250
    • Roels, J.1    Verstraete, W.2
  • 112
    • 84897943640 scopus 로고    scopus 로고
    • Microbial regulation of global biogeochemical cycles
    • Rousk J, Bengtson P. 2014. Microbial regulation of global biogeochemical cycles. Front. Microbiol. 5:103
    • (2014) Front. Microbiol. , vol.5 , pp. 103
    • Rousk, J.1    Bengtson, P.2
  • 113
    • 36549077770 scopus 로고    scopus 로고
    • The alkaline solution to the emergence of life: Energy, entropy and early evolution
    • Russell MJ. 2007. The alkaline solution to the emergence of life: energy, entropy and early evolution. Acta Biotheor. 55:133-79
    • (2007) Acta Biotheor. , vol.55 , pp. 133-179
    • Russell, M.J.1
  • 114
    • 3242755111 scopus 로고    scopus 로고
    • The rocky roots of the acetyl-CoA pathway
    • Russell MJ,MartinW. 2004. The rocky roots of the acetyl-CoA pathway. Trends Biochem. Sci. 29:358-63
    • (2004) Trends Biochem. Sci. , vol.29 , pp. 358-363
    • Russell, M.J.1    Martin, W.2
  • 115
    • 1042287425 scopus 로고    scopus 로고
    • The bioinorganic chemistry of the ancient ocean: The coevolution of cyanobacterial metal requirements and biogeochemical cycles at the Archean-Proterozoic boundary
    • Saito MA, Sigman DM, Morel FMM. 2003. The bioinorganic chemistry of the ancient ocean: the coevolution of cyanobacterial metal requirements and biogeochemical cycles at the Archean-Proterozoic boundary? Inorg. Chim. Acta 356:308-18
    • (2003) Inorg. Chim. Acta , vol.356 , pp. 308-318
    • Saito, M.A.1    Sigman, D.M.2    Morel, F.M.M.3
  • 116
    • 84996997451 scopus 로고    scopus 로고
    • The biosphere: Biogeochemical cycling on land
    • ed.WHSS Bernhardt Boston: Academic Press. 3rd edition
    • SchlesingerWH, BernhardtES. 2013. The biosphere: biogeochemical cycling on land. In Biogeochemistry, ed.WHSS Bernhardt, pp. 173-231. Boston: Academic Press. 3rd edition
    • (2013) Biogeochemistry , pp. 173-231
    • Schlesinger, W.H.1    Bernhardt, E.S.2
  • 117
    • 84986594462 scopus 로고    scopus 로고
    • The biosphere: The carbon cycle of terrestrial ecosystems
    • ed. WHSS Bernhardt Boston: Academic Press. 3rd edition
    • Schlesinger WH, Bernhardt ES. 2013. The biosphere: the carbon cycle of terrestrial ecosystems. In Biogeochemistry, ed. WHSS Bernhardt, pp. 135-72. Boston: Academic Press. 3rd edition
    • (2013) Biogeochemistry , pp. 135-172
    • Schlesinger, W.H.1    Bernhardt, E.S.2
  • 118
    • 11144296361 scopus 로고    scopus 로고
    • A perspective on the role of minerals in prebiotic synthesis
    • Schoonen M, Smirnov A, Cohn C. 2004. A perspective on the role of minerals in prebiotic synthesis. AMBIO J. Hum. Environ. 33:539-51
    • (2004) AMBIO J. Hum. Environ. , vol.33 , pp. 539-551
    • Schoonen, M.1    Smirnov, A.2    Cohn, C.3
  • 119
    • 84895532470 scopus 로고    scopus 로고
    • Function-based assessment of structural similarity measurements using metal co-factor orientation
    • Senn S, Nanda V, Falkowski P, Bromberg Y. 2014. Function-based assessment of structural similarity measurements using metal co-factor orientation. Proteins Struct. Funct. Bioinform. 82:648-56
    • (2014) Proteins Struct. Funct. Bioinform. , vol.82 , pp. 648-656
    • Senn, S.1    Nanda, V.2    Falkowski, P.3    Bromberg, Y.4
  • 120
    • 0000159438 scopus 로고
    • On the reduction and oxidation of the colouring matter of the blood
    • Stokes GG. 1863. On the reduction and oxidation of the colouring matter of the blood. Proc. R. Soc. 13:355-64
    • (1863) Proc. R. Soc. , vol.13 , pp. 355-364
    • Stokes, G.G.1
  • 122
    • 0034033261 scopus 로고    scopus 로고
    • History of the enzyme nomenclature system
    • Tipton K, Boyce S. 2000. History of the enzyme nomenclature system. Bioinformatics 16:34-40
    • (2000) Bioinformatics , vol.16 , pp. 34-40
    • Tipton, K.1    Boyce, S.2
  • 123
    • 67649562161 scopus 로고    scopus 로고
    • A case is made for the descent of electrons
    • Trefil J, Morowitz HJ, Smith E. 2009. A case is made for the descent of electrons. Am. Sci. 97:206-13
    • (2009) Am. Sci. , vol.97 , pp. 206-213
    • Trefil, J.1    Morowitz, H.J.2    Smith, E.3
  • 124
    • 0025358947 scopus 로고
    • The protonmotive Q cycle: Energy transduction by coupling of proton translocation to electron transfer by the cytochrome bc1 complex
    • Trumpower BL. 1990. The protonmotive Q cycle: energy transduction by coupling of proton translocation to electron transfer by the cytochrome bc1 complex. J. Biol. Chem. 265:11409
    • (1990) J. Biol. Chem. , vol.265 , pp. 11409
    • Trumpower, B.L.1
  • 125
    • 0014251790 scopus 로고
    • Metalloenzymes: The entatic nature of their active sites
    • Vallee BL, Williams R. 1968. Metalloenzymes: the entatic nature of their active sites. PNAS 59:498
    • (1968) PNAS , vol.59 , pp. 498
    • Vallee, B.L.1    Williams, R.2
  • 127
    • 33845425138 scopus 로고    scopus 로고
    • Catalytic nickel-iron-sulfur clusters: From minerals to enzymes
    • ed G Simonneaux Berlin: Springer
    • Volbeda A, Fontecilla-Camps JC. 2006. Catalytic nickel-iron-sulfur clusters: From minerals to enzymes. In Bioorganometallic Chemistry, ed G Simonneaux, pp. 57-82. Berlin: Springer
    • (2006) Bioorganometallic Chemistry , pp. 57-82
    • Volbeda, A.1    Fontecilla-Camps, J.C.2
  • 128
    • 84929718232 scopus 로고
    • Pyrite formation, the first energy source for life: A hypothesis
    • Wächtershäuser G. 1988. Pyrite formation, the first energy source for life: a hypothesis. Syst. Appl. Microbiol. 10:207-10
    • (1988) Syst. Appl. Microbiol. , vol.10 , pp. 207-210
    • Wächtershäuser, G.1
  • 129
    • 0025023531 scopus 로고
    • Evolution of the first metabolic cycles
    • Wächtershäuser G. 1990. Evolution of the first metabolic cycles. PNAS 87:200-4
    • (1990) PNAS , vol.87 , pp. 200-204
    • Wächtershäuser, G.1
  • 131
  • 132
    • 0001707233 scopus 로고
    • The Bakerian Lecture, 1981: Natural selection of the chemical elements
    • Williams R. 1981. The Bakerian Lecture, 1981: natural selection of the chemical elements. Proc. R. Soc. B 213:361-97
    • (1981) Proc. R. Soc. B , vol.213 , pp. 361-397
    • Williams, R.1
  • 135
    • 0034622999 scopus 로고    scopus 로고
    • Molecular evidence for the early evolution of photosynthesis
    • Xiong J, FischerWM,Inoue K, Nakahara M, BauerCE. 2000. Molecular evidence for the early evolution of photosynthesis. Science 289:1724-30
    • (2000) Science , vol.289 , pp. 1724-1730
    • Xiong, J.1    Fischer, W.M.2    Inoue, K.3    Nakahara, M.4    Bauer, C.E.5
  • 136
    • 33845630262 scopus 로고    scopus 로고
    • Photodriven reduction and oxidation reactions on colloidal semiconductor particles: Implications for prebiotic synthesis
    • Zhang XV, Ellery SP, Friend CM, Holland HD, Michel FM, et al. 2007. Photodriven reduction and oxidation reactions on colloidal semiconductor particles: implications for prebiotic synthesis. J. Photochem. Photobiol. A 185:301-11
    • (2007) J. Photochem. Photobiol. A , vol.185 , pp. 301-311
    • Zhang, X.V.1    Ellery, S.P.2    Friend, C.M.3    Holland, H.D.4    Michel, F.M.5


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