메뉴 건너뛰기




Volumn 399, Issue 6734, 1999, Pages 323-329

Evidence for lateral gene transfer between archaea and bacteria from genome sequence of Thermotoga maritima

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIAL GENE; BACTERIAL METABOLISM; BACTERIUM IDENTIFICATION; CELL DIVISION; EUBACTERIUM; GENE TRANSFER; GENOME; MOLECULAR EVOLUTION; MULTIGENE FAMILY; NONHUMAN; PHYLOGENY; PRIORITY JOURNAL; THERMOTOGA MARITIMA;

EID: 0033609333     PISSN: 00280836     EISSN: None     Source Type: Journal    
DOI: 10.1038/20601     Document Type: Article
Times cited : (1244)

References (45)
  • 1
    • 0022522022 scopus 로고
    • Thermotoga maritima sp. nov. represents a new genus of unique extremely thermophilic eubacteria growing up to 90°C
    • Huber, R. et al. Thermotoga maritima sp. nov. represents a new genus of unique extremely thermophilic eubacteria growing up to 90°C. Arch. Microbiol 144, 324-333 (1986).
    • (1986) Arch. Microbiol , vol.144 , pp. 324-333
    • Huber, R.1
  • 2
    • 0001846919 scopus 로고
    • eds Balows, A. et al. Springer, Berlin, Heidelberg, New York
    • Huber, R. & Stetter, K. O. in The Prokaryotes (eds Balows, A. et al.) 3809-3815 (Springer, Berlin, Heidelberg, New York, 1992).
    • (1992) The Prokaryotes , pp. 3809-3815
    • Huber, R.1    Stetter, K.O.2
  • 4
    • 0029653518 scopus 로고
    • Whole-genome random sequence of Haemophilus influenzae Rd
    • Fleischmann, R. D. et al. Whole-genome random sequence of Haemophilus influenzae Rd. Science 269, 496-512 (1995).
    • (1995) Science , vol.269 , pp. 496-512
    • Fleischmann, R.D.1
  • 5
    • 0031458333 scopus 로고    scopus 로고
    • The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus
    • Klenk, H.-P. et al. The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus. Nature 390, 364-370 (1997).
    • (1997) Nature , vol.390 , pp. 364-370
    • Klenk, H.-P.1
  • 6
    • 0029985398 scopus 로고    scopus 로고
    • Asymmetric substitution patterns in the two DNA strands of bacteria
    • Lobry, J. R. Asymmetric substitution patterns in the two DNA strands of bacteria. Mol. Biol. Evol. 13, 660-665 (1996).
    • (1996) Mol. Biol. Evol. , vol.13 , pp. 660-665
    • Lobry, J.R.1
  • 7
    • 0032517137 scopus 로고    scopus 로고
    • Skewed oligomers and origins of replication
    • Salzberg, S., Salzberg, A., Kerlavage, A. & Tomb, J.-F. Skewed oligomers and origins of replication. Gene 217, 57-67 (1998).
    • (1998) Gene , vol.217 , pp. 57-67
    • Salzberg, S.1    Salzberg, A.2    Kerlavage, A.3    Tomb, J.-F.4
  • 8
    • 16044367245 scopus 로고    scopus 로고
    • Complete genome sequence of the methanogenic archaeon Methanococcus jannashii
    • Bult, C. J. et al. Complete genome sequence of the methanogenic archaeon Methanococcus jannashii. Science 273, 1058-1073 (1996).
    • (1996) Science , vol.273 , pp. 1058-1073
    • Bult, C.J.1
  • 9
    • 0032518163 scopus 로고    scopus 로고
    • Microbial gene identification using interpolated Markov models
    • Salzberg, S. L, Delcher, A. L., Kasif, S. & White, O. Microbial gene identification using interpolated Markov models. Nucleic Acids Res. 15, 544-548 (1998).
    • (1998) Nucleic Acids Res. , vol.15 , pp. 544-548
    • Salzberg, S.L.1    Delcher, A.L.2    Kasif, S.3    White, O.4
  • 10
    • 0027133165 scopus 로고
    • Functions of gene products of Escherichia coli
    • Riley, M. Functions of gene products of Escherichia coli. Mirobiol. Rev. 57, 862-952 (1993).
    • (1993) Mirobiol. Rev. , vol.57 , pp. 862-952
    • Riley, M.1
  • 11
    • 0032568375 scopus 로고    scopus 로고
    • The complete genome of the hyperthermophilic bacterium Aquifex aeolicus
    • Deckert, G. et al. The complete genome of the hyperthermophilic bacterium Aquifex aeolicus. Nature 392, 353-358 (1998).
    • (1998) Nature , vol.392 , pp. 353-358
    • Deckert, G.1
  • 12
    • 0028345374 scopus 로고
    • Computer-aided analyses of transport protein sequences: Gleaning evidence concerning function, structure, biogenesis, and evolution
    • Saier, M. H. Jr Computer-aided analyses of transport protein sequences: gleaning evidence concerning function, structure, biogenesis, and evolution. Microbiol. Rev. 58, 71-93 (1994).
    • (1994) Microbiol. Rev. , vol.58 , pp. 71-93
    • Saier M.H., Jr.1
  • 13
    • 0032579989 scopus 로고    scopus 로고
    • Complete sequence and gene organization of the genome of a hyperthermophilic archaebacterium, Pyrococcus horikoshii OT3
    • Kawarabayasi, Y. et al. Complete sequence and gene organization of the genome of a hyperthermophilic archaebacterium, Pyrococcus horikoshii OT3. DNA Res. 5, 55-76 (1998).
    • (1998) DNA Res. , vol.5 , pp. 55-76
    • Kawarabayasi, Y.1
  • 15
    • 0028924376 scopus 로고
    • Purification of Thermotoga maritima enzymes for the degradation of cellulosic materials
    • Bronnenmeier, K., Kern, A., Liebl, W. & Staudenbauer, W. L. Purification of Thermotoga maritima enzymes for the degradation of cellulosic materials. Appl. Environ. Microbiol. 61, 1399-1407 (1995).
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 1399-1407
    • Bronnenmeier, K.1    Kern, A.2    Liebl, W.3    Staudenbauer, W.L.4
  • 16
    • 0027386253 scopus 로고
    • The cellulosome; the exocellular organelle of Clostridium
    • Felix, C. R. & Ljungdahl, L. O. The cellulosome; the exocellular organelle of Clostridium. Annu. Rev. Microbiol. 47, 791-819 (1993).
    • (1993) Annu. Rev. Microbiol. , vol.47 , pp. 791-819
    • Felix, C.R.1    Ljungdahl, L.O.2
  • 17
    • 0032480241 scopus 로고    scopus 로고
    • Microbiological evidence for Fe(III) reduction on early Earth
    • Vargas, M., Kashefi, K., Blunt-Harris, E. L & Lovley, D. R. Microbiological evidence for Fe(III) reduction on early Earth. Nature 395, 65-67 (1998).
    • (1998) Nature , vol.395 , pp. 65-67
    • Vargas, M.1    Kashefi, K.2    Blunt-Harris, E.L.3    Lovley, D.R.4
  • 18
    • 0027120909 scopus 로고
    • Heterotrophic sulfur reduction by Thermotoga sp. strain FjSS3.B1
    • Janssen, P. H. & Morgan, H. W. Heterotrophic sulfur reduction by Thermotoga sp. strain FjSS3.B1. FEMS Microbiol. Lett. 75, 213-217 (1992).
    • (1992) FEMS Microbiol. Lett. , vol.75 , pp. 213-217
    • Janssen, P.H.1    Morgan, H.W.2
  • 19
    • 0029619249 scopus 로고
    • Motility and thermotactic responses of Thermotoga maritima
    • Gluch, M. F., Typke, D. & Baumeister, W. Motility and thermotactic responses of Thermotoga maritima. J. Bacteriol. 177, 5473-5479 (1995).
    • (1995) J. Bacteriol. , vol.177 , pp. 5473-5479
    • Gluch, M.F.1    Typke, D.2    Baumeister, W.3
  • 20
    • 0029819430 scopus 로고    scopus 로고
    • Characterization of the genes and proteins of a two-component system from the hyperthermophilic bacterium Thermotoga maritima
    • Lee, P. J. & Stock, A. M. Characterization of the genes and proteins of a two-component system from the hyperthermophilic bacterium Thermotoga maritima. J. Bacteriol. 178, 5579-5585 (1996).
    • (1996) J. Bacteriol. , vol.178 , pp. 5579-5585
    • Lee, P.J.1    Stock, A.M.2
  • 22
    • 0031864184 scopus 로고    scopus 로고
    • Type III protein secretion systems in bacterial pathogens of animals and plants
    • Hueck, C. J. Type III protein secretion systems in bacterial pathogens of animals and plants. Microbiol. Mol. Biol. Rev. 62, 379-433 (1998).
    • (1998) Microbiol. Mol. Biol. Rev. , vol.62 , pp. 379-433
    • Hueck, C.J.1
  • 23
    • 0030920499 scopus 로고    scopus 로고
    • Binding and transport of transforming DNa by Baccillus subtilis: The role of type IV pilin-like proteins - A review
    • Dubnau, D. Binding and transport of transforming DNA by Baccillus subtilis: the role of type IV pilin-like proteins - a review. Gene 11, 191-198 (1997).
    • (1997) Gene , vol.11 , pp. 191-198
    • Dubnau, D.1
  • 24
    • 0031050795 scopus 로고    scopus 로고
    • Molecular systematic studies of eubacteria, using sigma70-type sigma factors of group 1 and group 2
    • Gruber, T. M. & Bryant, D. A. Molecular systematic studies of eubacteria, using sigma70-type sigma factors of group 1 and group 2. J. Bacteriol. 179, 1734-1747 (1997).
    • (1997) J. Bacteriol. , vol.179 , pp. 1734-1747
    • Gruber, T.M.1    Bryant, D.A.2
  • 25
    • 0030904280 scopus 로고    scopus 로고
    • Antigenic variation in Lyme disease Borreliae by promiscuous recombination of VMP-like sequence cassettes
    • Zhang, J., Hardham, J., Barbour, A. & Norris, S. Antigenic variation in Lyme disease Borreliae by promiscuous recombination of VMP-like sequence cassettes. Cell 99, 275-285 (1997).
    • (1997) Cell , vol.99 , pp. 275-285
    • Zhang, J.1    Hardham, J.2    Barbour, A.3    Norris, S.4
  • 26
    • 0030835739 scopus 로고    scopus 로고
    • The complete genome sequence of the gastric pathogen Helicobacter pylori
    • Tomb, J.-F. et al. The complete genome sequence of the gastric pathogen Helicobacter pylori. Science 388, 539-547 (1997).
    • (1997) Science , vol.388 , pp. 539-547
    • Tomb, J.-F.1
  • 27
    • 0029781454 scopus 로고    scopus 로고
    • TRNA-dependent asparagine formation
    • Curnow, A. W., Ibba, M. & Soll, D. tRNA-dependent asparagine formation. Nature 382, 589-590 (1996).
    • (1996) Nature , vol.382 , pp. 589-590
    • Curnow, A.W.1    Ibba, M.2    Soll, D.3
  • 28
    • 0031470387 scopus 로고    scopus 로고
    • Archaza and the prokaryote-to-eukaryote transition
    • Brown, J. R. & Doolittle, W. F. Archaza and the prokaryote-to-eukaryote transition. Microbiol. Mol. Biol. Rev. 61, 456-502 (1997).
    • (1997) Microbiol. Mol. Biol. Rev. , vol.61 , pp. 456-502
    • Brown, J.R.1    Doolittle, W.F.2
  • 29
    • 0029610851 scopus 로고
    • The Reca protein as a model molecule for molecular systematic studies of bacteria; comparison of trees of RecAs and 16S rRNAs from the same species
    • Eisen, J. A, The RecA protein as a model molecule for molecular systematic studies of bacteria; comparison of trees of RecAs and 16S rRNAs from the same species. J. Mol. Evol. 41, 1105-1123 (1995).
    • (1995) J. Mol. Evol. , vol.41 , pp. 1105-1123
    • Eisen, J.A.1
  • 30
    • 15644383855 scopus 로고    scopus 로고
    • Complete genome sequence of Methanebacterium thermoautotrophicumΔH: Functional analysts and comparative genomics
    • Smith, D. R. et al. Complete genome sequence of Methanebacterium thermoautotrophicumΔH: Functional analysts and comparative genomics. J. Bacteriol. 179, 7135-7155 (1997).
    • (1997) J. Bacteriol. , vol.179 , pp. 7135-7155
    • Smith, D.R.1
  • 31
    • 0030731108 scopus 로고    scopus 로고
    • The complete genome sequence of the gram-positive bacterium Bacillus subtilis
    • Kunst, F. et al. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Nature 390, 249-256 (1997).
    • (1997) Nature , vol.390 , pp. 249-256
    • Kunst, F.1
  • 32
    • 0031470826 scopus 로고    scopus 로고
    • Genomic sequence of a Lyme disease spirochete, Borrelia burgdorferi
    • Fraser, C. M. et al. Genomic sequence of a Lyme disease spirochete, Borrelia burgdorferi. Nature 390, 580-586 (1997).
    • (1997) Nature , vol.390 , pp. 580-586
    • Fraser, C.M.1
  • 33
    • 15444350252 scopus 로고    scopus 로고
    • The complete genome sequence of Escherichia coli K-12
    • Blattner, F. R. et al. The complete genome sequence of Escherichia coli K-12. Science 277, 1453-1462 (1997).
    • (1997) Science , vol.277 , pp. 1453-1462
    • Blattner, F.R.1
  • 34
    • 85069428720 scopus 로고
    • Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence
    • Cole, S. T. et al. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature 11, 537-544 (1993).
    • (1993) Nature , vol.11 , pp. 537-544
    • Cole, S.T.1
  • 35
    • 0028829125 scopus 로고
    • The minimal gene complement of Mycoplasma genitalium
    • Fraser, C. M. et al. The minimal gene complement of Mycoplasma genitalium. Science 270, 397-403 (1995).
    • (1995) Science , vol.270 , pp. 397-403
    • Fraser, C.M.1
  • 36
    • 10544255079 scopus 로고    scopus 로고
    • Complete sequence analysis of the genome of the bacterium Mycoplasma pneumoniae
    • Himmelreich, R. et al. Complete sequence analysis of the genome of the bacterium Mycoplasma pneumoniae. Nucleic Acids Res. 24, 4420-4449 (1996).
    • (1996) Nucleic Acids Res. , vol.24 , pp. 4420-4449
    • Himmelreich, R.1
  • 37
    • 0030606608 scopus 로고    scopus 로고
    • Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions
    • Kaneko, T. et al. Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions. DNA Res. (suppl.) 3, 185-209 (1996).
    • (1996) DNA Res. , vol.3 , Issue.SUPPL. , pp. 185-209
    • Kaneko, T.1
  • 38
    • 0032540874 scopus 로고    scopus 로고
    • Complete genome sequence of Treponema pallidum, the syphilis spirochete
    • Fraser, C. M. et al. Complete genome sequence of Treponema pallidum, the syphilis spirochete, Science 281, 375-388 (1998).
    • (1998) Science , vol.281 , pp. 375-388
    • Fraser, C.M.1
  • 39
    • 10244239321 scopus 로고    scopus 로고
    • Life with 6000 genes
    • Goffeau, A. et al. Life with 6000 genes. Science 274, 563-567 (1996).
    • (1996) Science , vol.274 , pp. 563-567
    • Goffeau, A.1
  • 40
    • 0032403213 scopus 로고    scopus 로고
    • The hyperthermophilic bacterium Thermotoga maritima has two different classes of family C DNA polymemes: Evolutionary implications
    • Huang, Y.-P. & Ito, J. The hyperthermophilic bacterium Thermotoga maritima has two different classes of family C DNA polymemes: evolutionary implications. Nucleic Acids Res. 26, 5300-5309 (1998).
    • (1998) Nucleic Acids Res. , vol.26 , pp. 5300-5309
    • Huang, Y.-P.1    Ito, J.2
  • 41
    • 0030994798 scopus 로고    scopus 로고
    • Amelioration of bacterial genomes: Rates of change and exchange
    • Lawrence, J. G. & Ochman, H. Amelioration of bacterial genomes: rates of change and exchange. J. Mol. Evol. 44, 383-397 (1997).
    • (1997) J. Mol. Evol. , vol.44 , pp. 383-397
    • Lawrence, J.G.1    Ochman, H.2
  • 42
    • 0001899550 scopus 로고
    • TIGR Assembler: A new tool for assembling large shotgun sequencing projects
    • Sutton, G. G., White, O., Adams, M. D. & Kerlavage, A. R. TIGR Assembler: A new tool for assembling large shotgun sequencing projects. Genome Seq. Technol. 1, 9-19 (1995).
    • (1995) Genome Seq. Technol. , vol.1 , pp. 9-19
    • Sutton, G.G.1    White, O.2    Adams, M.D.3    Kerlavage, A.R.4
  • 44
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4, 406-425 (1987).
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 45
    • 0028568176 scopus 로고
    • TopPred II: An improved software for membrane protein structure predictions
    • Claros, M. G. & von Heijne, G. TopPred II: an improved software for membrane protein structure predictions. Comput. Appl. Biosci. 10, 685-686 (1994).
    • (1994) Comput. Appl. Biosci. , vol.10 , pp. 685-686
    • Claros, M.G.1    Von Heijne, G.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.