Investigation of the effect of genotype and agronomic conditions on metabolomic profiles of selected strawberry cultivars with different sensitivity to environmental stress

Plant Physiology and Biochemistry

Volumn 101, Issue , 2016, Pages 14-22

  Akhatou, Ikram ^a   González Domínguez, Raúl ^a   Fernández Recamales, Ángeles ^a  

^a UNIVERSITY OF HUELVA   (Spain)

Author keywords

Agronomic conditions; Cultivars; Food metabolomics; Gas chromatography mass spectrometry; Strawberry

Indexed keywords

FRAGARIA; GENOTYPE; METABOLISM; METABOLOME; PHYSIOLOGICAL STRESS; PHYSIOLOGY;

FRAGARIA; GENOTYPE; METABOLOME; STRESS, PHYSIOLOGICAL;

EID: 84961351305     PISSN: 09819428     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plaphy.2016.01.016     Document Type: Article

References (46)

1. Akhatou I., Fernández-Recamales A. Nutritional and nutraceutical quality of strawberries in relation to harvest time and crop conditions. J. Agric. Food Chem. 2014, 62:5749-5760.
2. Akhatou I., Fernández-Recamales A. Influence of cultivar and culture system on nutritional and organoleptic quality of strawberry. J. Sci. Food Chem. 2014, 94:866-875.
3. Ali K., Maltese F., Fortes A.M., Pais M.S., Verpoorte R., Choi Y.H. Pre-analytical method for NMR-based grape metabolic fingerprinting and chemometrics. Anal. Chim. Acta 2011, 703:179-186.
4. Ashraf M., Harris P.J.C. Potential biochemical indicators of salinity tolerance in plants. Plant Sci. 2004, 166:3-16.
5. Battino M., Beekwilder J., Denoyes-Rothan B., Laimer M., McDougall G.J., Mezzetti B. Bioactive compounds in berries relevant to human health. Nutr. Rev. 2009, 67(Suppl. 1):S145-S150.
6. Bohnert H.R., Nelson D.E., Jensen R.G. Adaptations to environmental stresses. Plant Cell. 1995, 7:1099-1111.
7. Cevallos-Cevallos J.M., Reyes-de-Corcuera J.I., Etxeberria E., Danyluk M.D., Rodrick G.E. Metabolomic analysis in food science. A review. Trends Food Sci. Technol. 2009, 20:557-566.
8. Cevallos-Cevallos J.M., Futch D.B., Shits T., Folimonova S.Y., Reyes-de-Corcuera J.I. GC-MS metabolomic differentiation of selected citrus varieties with different sensitivity to citrus huanglongbing. Plant Physiol. Biochem. 2012, 53:69-76.
9. Chiera J.M., Streeter J.G., Finer J.J. Ononitol and pinitol production in transgenic soybean containing the inositol methyl transferase gene from Mesembryanthemum crystallinum. Plant Sci. 2006, 171:647-654.
10. Cocco C., Magnani S., Maltoni M.L., Quacquarelli I., Cacchi M., Antunes L.E.C., D'Antuono L.F., Faedi W., Baruzzi G. Effects of site and genotype onstrawberry fruits quality traits and bioactive compounds. J. Berry Res. 2015, 5:145-155.
11. Cook D. A prominent role for the CBF cold response pathway in configuring the low temperature metabolome of Arabidopsis. Proc. Natl. Acad. Sci. 2004, 101:15243-15248.
12. Dai Z.W., León C., Feli R., Lunn J.E., Delrot S., Gomès E. Metabolic profiling reveals coordinated switches in primary carbohydrate metabolism in grape berry (Vitis vinifera L.), a non-climateric fleshy fruit. J. Exp. Bot. 2013, 64:1345-1355.
13. Diamanti J., Capocasa F., Battino M., Mezzetti B. Inter-specific back-crossesand intra-specific crosses to generate strawberry genetic material with increased fruit sensory and nutritional quality. Int. J. Fruit. Sci. 2013, 13:196-204.
14. Diamanti J., Mazzoni L., Balducci F., Cappelletti R., Capocasa F., Battino M., Dobson G., Stewart D., Mezzetti B. Use of wild genotypes in breeding program increases strawberry fruit sensorial and nutritional quality. J. Agric. Food Chem. 2014, 62:3944-3953.
15. Fernie A.R., Schauer N. Metabolomics-assisted breeding: a viable option for crop improvement?. Trends Genet. 2008, 25:39-48.
16. Frank T., Scholz B., Peter S., Engel K.-H. Metabolite profiling of barley: influence of the malting process. Food Chem. 2011, 124:948-957.
17. Giampieri F., Tulipani S., Alvarez-Suarez J.M., Quiles J.L., Mezzetti B., Battino M. The strawberry: composition, nutritional quality, and impact on human health. Nutrition 2012, 28:9-19.
18. González-Domínguez R., García-Barrera T., Gómez-Ariza J.L. Metabolite profiling for the identification of altered metabolic pathways in Alzheimer's disease. J. Pharm. Biomed. Anal. 2015, 107:75-81.
19. Hurtado-Fernández E., Pacchiarotta T., Mayboroda O.A., Fernández-Gutiérrez A., Carrasco-Pancorbo A. Metabolomic analysis of avocado fruits by GC-APCI-TOF MS: effects of ripening degrees and fruit varieties. Anal. Bioanal. Chem. 2015, 407:547-555.
20. Josuttis M., Carlen C., Crespo P., Nestby R., Toldam-Andersen T.B., Dietrich H., Krüger E. A comparison of bioactive compounds of strawberry fruit from Europe affected by genotype and latitude. J. Berry Res. 2012, 2:73-95.
21. Kallio H., Hakala M., Pelkkikangas A.M., Lapveteläinen A. Sugars and acids of strawberry varieties. Eur. Food Res. Technol. 2000, 212:81-85.
22. Katajamaa M., Oresic M. Data processing for mass spectrometry-based metabolomics. J. Chromatogr. A 2007, 1158:318-328.
23. Keutgen A.J., Pawelzik E. Quality and nutritional value of strawberry fruit under long term salt stress. Food Chem. 2008, 107:1413-1420.
24. Keutgen A.J., Pawelzik E. Contribution of amino acids to strawberry fruit quality and their relevance as stress indicators under NaCl salinity. Food Chem. 2008, 111:642-647.
25. 1H-nuclear magnetic resonance spectroscopy. Biosci. Biotechnol. Biochem. 2011, 75:1090-1097.
26. 1H NMR spectroscopy for quality assessment of green tea, Camellia sinensis (L.). J. Agric. Food Chem. 2004, 52:692-700.
27. Loewus F., Murthy P. Myo-inositol metabolism in plants. Plant Sci. 2000, 150:1-19.
28. López-Bucio J., Nieto-Jacobo M.F., Ramírez-Rodríguez V., Herrera-Estrella L. Organic acid metabolism in plants: from adaptive physiology to transgenic varieties for cultivation in extreme soils. Plant Sci. 2000, 160:1-13.
29. Ministerio de Agricultura, Alimentación y Medio Ambiente (MAGRAMA) Anuario de Estadística 2015, accessed September 2015. http://www.magrama.gob.es/estadistica/pags/anuario/2014-Avance/AE_2014_Avance.pdf.
30. Moing A., Renaud C. Biochemical changes during fruit development of four strawberry cultivars. J. Am. Soc. Hort. Sci. 2001, 126:394-403.
31. Nelson D.E., Rammesmayer G., Bohnert H.J. Regulation of cell-specific inositol metabolism and transport in plant salinity tolerance. Plant Cell. 1998, 10:753-764.
32. Nestby R., Martinussen I., Krogstad T., Uleberg E. Effect of fertilization, tiller cutting and environment on plant growth and yield of European blueberry (Vaccinium myrtillus L.) in Norwegian forest fields. J. Berry Res. 2014, 4:79-95.
33. Nestby R., Takeda F. Method to reduce low temperature stress (LTS) in red raspberry (Rubus idaeus L.). J. Berry Res. 2015, 5:219-230.
34. Oms-Oliu G., Hertog M.L.A.T.M., Van de Poel B., Ampofo-Asiamaa J., Geeraerd A.H., Nicolaï B.M. Metabolic characterization of tomato fruit during preharvest development, ripening, and postharvest shelf-life. Postharvest Biol. Technol. 2011, 62:7-16.
35. Oms-Oliu G., Odriozola-Serrano I., Martín-Belloso O. Metabolomics for assessing safety and quality of plant-derived food. Food Res. Int. 2013, 54:1172-1183.
36. 2. Postharvest Biol. Technol. 2003, 27:171-183.
37. Pereira G.E., Gaudillere J.-P., Pieri P., Hilbert G., Maucourt M., Deborde C., Moing A., Rolin D. Microclimate influence on mineral and metabolic profiles of grape berries. J. Agric. Food Chem. 2006, 54:6765-6775.
38. Pradas I., Medina J.J., Ortiz V., Moreno-Rojas J.M. 'Fuentepina' and 'Amiga', two new strawberry cultivars: evaluation of genotype, ripening and seasonal effects on quality characteristics and health-promoting compound. J. Berry Res. 2015, 5:157-171.
39. Recamales A.F., López Medina J., Hernanz D. Physicochemicalcharacteristics and mineral content of strawberries grown in soiland soilless system. J. Food Qual. 2007, 30:837-853.
40. Roessner U., Wagner C., Kopka J., Trethewey R.N., Willmitzer L. Simultaneous analysis of metabolites in potato tuber by gas chromatography-mass spectrometry. Plant J. 2000, 23:131-142.
41. Röhlig R.M., Engel K.-H. Influence of the input system (conventional vs organic farming) on metabolite profiles of maize (Zea mays) kernels. J. Agric. Food Chem. 2010, 58:3022-3030.
42. 1H NMR analysis coupled with multivariate statistics. J. Agric. Food Chem. 2009, 57:1481-1490.
43. Ulrich D., Olbricht K. Diversity of metabolite patterns and sensory characters in wild and cultivated strawberries. J. Berry Res. 2014, 4:11-17.
44. Veselkov K.A., Vingara L.K., Masson P., Robinette S.L., Want E., Li J.V., Barton R.H., Boursier-Neyret C., Walther B., Ebbels T.M., Pelczer I., Holmes E., Lindon J.C., Nicholson J.K. Optimized preprocessing of ultra-performance liquid chromatography/mass spectrometry urinary metabolic profiles for improved information recovery. Anal. Chem. 2011, 83:5864-5872.
45. Wishart D.S. Metabolomics: applications to food science and nutrition research. Trends Food Sci. Technol. 2008, 19:482-493.
46. Zhang J., Wang X., Yu O., Tang J., Gu X., Wan X., Fang C. Metabolic profiling of strawberry (Fragaria x ananassa Duch.) during fruit development and maturation. J. Exp. Bot. 2010, 1:1-16.