-
1
-
-
45249119046
-
Phytophthora cinnamomi and Australia’s biodiversity: impacts, predictions and progress towards control
-
Cahill DM, Rookes JE, Wilson BA, et al. Phytophthora cinnamomi and Australia’s biodiversity:impacts, predictions and progress towards control. Aust J Bot. 2008;56:279–310
-
(2008)
Aust J Bot
, vol.56
, pp. 279-310
-
-
Cahill, D.M.1
Rookes, J.E.2
Wilson, B.A.3
-
2
-
-
84928032621
-
Focus issue on plant immunity: from model systems to crop species
-
Schwessinger B, Bart R, Krasileva K, Coaker G., Focus issue on plant immunity:from model systems to crop species. Front Plant Sci. 2015;6:195
-
(2015)
Front Plant Sci
, vol.6
, pp. 195
-
-
Schwessinger, B.1
Bart, R.2
Krasileva, K.3
Coaker, G.4
-
3
-
-
84878758259
-
Transcriptional profiling of Zea mays roots reveals roles for jasmonic acid and terpenoids in resistance against Phytophthora cinnamomi
-
Allardyce JA, Rookes JE, Hussain HI, Cahill DM., Transcriptional profiling of Zea mays roots reveals roles for jasmonic acid and terpenoids in resistance against Phytophthora cinnamomi. Funct Integr Genomics. 2013;13:217–228
-
(2013)
Funct Integr Genomics
, vol.13
, pp. 217-228
-
-
Allardyce, J.A.1
Rookes, J.E.2
Hussain, H.I.3
Cahill, D.M.4
-
4
-
-
33751100626
-
The plant immune system
-
Jones JD, Dangle JL., The plant immune system. Nature. 2006;444:323–329
-
(2006)
Nature
, vol.444
, pp. 323-329
-
-
Jones, J.D.1
Dangle, J.L.2
-
5
-
-
59349116471
-
Elucidation of defence responses and signalling pathways induced in Arabidopsis thaliana following challenge with Phytophthora cinnamomi
-
Rookes JE, Wright ML, Cahill DM., Elucidation of defence responses and signalling pathways induced in Arabidopsis thaliana following challenge with Phytophthora cinnamomi. Physiol Mol Plant Pathol. 2008;72:151–161
-
(2008)
Physiol Mol Plant Pathol
, vol.72
, pp. 151-161
-
-
Rookes, J.E.1
Wright, M.L.2
Cahill, D.M.3
-
6
-
-
84899149746
-
Plant PRRs and the activation of innate immune signaling
-
Macho AP, Zipfel C., Plant PRRs and the activation of innate immune signaling. Mol Cell. 2014;54:263–272
-
(2014)
Mol Cell
, vol.54
, pp. 263-272
-
-
Macho, A.P.1
Zipfel, C.2
-
7
-
-
84922212146
-
β-Glucans and eicosapolyenoic acids as MAMPs in plant–oomycete interactions: past and present
-
Robinson SM, Bostock RM., β-Glucans and eicosapolyenoic acids as MAMPs in plant–oomycete interactions:past and present. Front Plant Sci. 2015;5:797
-
(2015)
Front Plant Sci
, vol.5
, pp. 797
-
-
Robinson, S.M.1
Bostock, R.M.2
-
8
-
-
84929958928
-
The receptor-like cytoplasmic kinase PCRK1 contributes to pattern-triggered immunity against Pseudomonas syringae in Arabidopsis thaliana
-
Sreekanta S, Bethke G, Hatsugai N, et al. The receptor-like cytoplasmic kinase PCRK1 contributes to pattern-triggered immunity against Pseudomonas syringae in Arabidopsis thaliana. New Phytol. 2015;207:78–90
-
(2015)
New Phytol
, vol.207
, pp. 78-90
-
-
Sreekanta, S.1
Bethke, G.2
Hatsugai, N.3
-
9
-
-
84880509682
-
Plant–pathogen interactions: disease resistance in modern agriculture
-
Boyd LA, Ridout C, ÓSullivan DM, et al. Plant–pathogen interactions:disease resistance in modern agriculture. Trends Genet. 2013;29:233–240
-
(2013)
Trends Genet
, vol.29
, pp. 233-240
-
-
Boyd, L.A.1
Ridout, C.2
ÓSullivan, D.M.3
-
10
-
-
77954763024
-
Plant immunity: towards an integrated view of plant–pathogen interactions
-
Dodds PN, Rathjen JP., Plant immunity:towards an integrated view of plant–pathogen interactions. Nat Rev Genet. 2010;11:539–548
-
(2010)
Nat Rev Genet
, vol.11
, pp. 539-548
-
-
Dodds, P.N.1
Rathjen, J.P.2
-
11
-
-
84923683880
-
Revealing shared and distinct gene network organization in Arabidopsis immune responses by integrative analysis
-
Dong X, Jiang Z, Peng Y-L, Zhang Z., Revealing shared and distinct gene network organization in Arabidopsis immune responses by integrative analysis. Plant Physiol. 2015;167:1186–1203
-
(2015)
Plant Physiol
, vol.167
, pp. 1186-1203
-
-
Dong, X.1
Jiang, Z.2
Peng, Y.-L.3
Zhang, Z.4
-
12
-
-
0001119910
-
Current status of the gene-for-gene concept
-
Flor HH., Current status of the gene-for-gene concept. Annu Rev Phytopathol. 1971;9:275–296
-
(1971)
Annu Rev Phytopathol
, vol.9
, pp. 275-296
-
-
Flor, H.H.1
-
13
-
-
84938947444
-
Chloroplast stromules function during innate immunity
-
Caplan JL, Kumar AS, Park E, et al. Chloroplast stromules function during innate immunity. Dev Cell. 2015;34:45–57
-
(2015)
Dev Cell
, vol.34
, pp. 45-57
-
-
Caplan, J.L.1
Kumar, A.S.2
Park, E.3
-
14
-
-
84942616435
-
Stromules: signal conduits for plant immunity
-
Gu Y, Dong X., Stromules:signal conduits for plant immunity. Dev Cell. 2015;34:3–4
-
(2015)
Dev Cell
, vol.34
, pp. 3-4
-
-
Gu, Y.1
Dong, X.2
-
15
-
-
84937566303
-
Immunity pipelines
-
VanHook AM., Immunity pipelines. Sci Signal. 2015;8:ec191
-
(2015)
Sci Signal
, vol.8
, pp. ec191
-
-
VanHook, A.M.1
-
16
-
-
84949189659
-
Toward understanding of rice innate immunity against Magnaporthe oryzae
-
Azizi P, Rafii MY, Abdullah SNA, et al. Toward understanding of rice innate immunity against Magnaporthe oryzae. Critic Rev Biotechnol. 2015;36:165–174
-
(2015)
Critic Rev Biotechnol
, vol.36
, pp. 165-174
-
-
Azizi, P.1
Rafii, M.Y.2
Abdullah, S.N.A.3
-
17
-
-
35148827341
-
Elicitors, effectors, and R genes: the new paradigm and a lifetime supply of questions
-
Bent AF, Mackey D., Elicitors, effectors, and R genes:the new paradigm and a lifetime supply of questions. Annu Rev Phytopathol. 2007;45:399–436
-
(2007)
Annu Rev Phytopathol
, vol.45
, pp. 399-436
-
-
Bent, A.F.1
Mackey, D.2
-
18
-
-
84876872977
-
Mutations in FLS2 Ser-938 dissect signaling activation in FLS2-mediated arabidopsis immunity
-
Cao Y, Aceti DJ, Sabat G, et al. Mutations in FLS2 Ser-938 dissect signaling activation in FLS2-mediated arabidopsis immunity. PLoS Pathog. 2013;9:e1003313
-
(2013)
PLoS Pathog
, vol.9
, pp. e1003313
-
-
Cao, Y.1
Aceti, D.J.2
Sabat, G.3
-
19
-
-
84908213403
-
Microbial signature-triggered plant defense responses and early signaling mechanisms
-
Wu S, Shan L, He P., Microbial signature-triggered plant defense responses and early signaling mechanisms. Plant Sci. 2014;228:118–126
-
(2014)
Plant Sci
, vol.228
, pp. 118-126
-
-
Wu, S.1
Shan, L.2
He, P.3
-
20
-
-
57549114827
-
The plant innate immunity response in stomatal guard cells invokes G-protein-dependent ion channel regulation
-
Zhang W, He SY, Assmann SM., The plant innate immunity response in stomatal guard cells invokes G-protein-dependent ion channel regulation. Plant J. 2008;56:984–996
-
(2008)
Plant J
, vol.56
, pp. 984-996
-
-
Zhang, W.1
He, S.Y.2
Assmann, S.M.3
-
21
-
-
84907322446
-
Toward a systems understanding of plant–microbe interactions
-
Mine A, Sato M, Tsuda K., Toward a systems understanding of plant–microbe interactions. Front Plant Sci. 2014;5:423
-
(2014)
Front Plant Sci
, vol.5
, pp. 423
-
-
Mine, A.1
Sato, M.2
Tsuda, K.3
-
22
-
-
33745040554
-
Plant NBS-LRR proteins: adaptable guards
-
McHale L, Tan X, Koehl P, Michelmore RW., Plant NBS-LRR proteins:adaptable guards. Genome Biol. 2006;7:212
-
(2006)
Genome Biol
, vol.7
, pp. 212
-
-
McHale, L.1
Tan, X.2
Koehl, P.3
Michelmore, R.W.4
-
23
-
-
84928897756
-
Effector-triggered immunity: from pathogen perception to robust defense
-
Cui H, Tsuda K, Parker JE., Effector-triggered immunity:from pathogen perception to robust defense. Annu Rev Plant Biol. 2015;66:487–511
-
(2015)
Annu Rev Plant Biol
, vol.66
, pp. 487-511
-
-
Cui, H.1
Tsuda, K.2
Parker, J.E.3
-
24
-
-
80051967147
-
NLR functions in plant and animal immune systems: so far and yet so close
-
Maekawa T, Kufer TA, Schulze-Lefert P., NLR functions in plant and animal immune systems:so far and yet so close. Nat Immunol. 2011;12:817–826
-
(2011)
Nat Immunol
, vol.12
, pp. 817-826
-
-
Maekawa, T.1
Kufer, T.A.2
Schulze-Lefert, P.3
-
25
-
-
84926522841
-
Transcriptional networks in plant immunity
-
Tsuda K, Somssich I., Transcriptional networks in plant immunity. New Phytol. 2015;206:932–947
-
(2015)
New Phytol
, vol.206
, pp. 932-947
-
-
Tsuda, K.1
Somssich, I.2
-
26
-
-
32944479048
-
Host-microbe interactions: shaping the evolution of the plant immune response
-
Chisholm ST, Coaker G, Day B, Staskawicz BJ., Host-microbe interactions:shaping the evolution of the plant immune response. Cell. 2006;124:803–814
-
(2006)
Cell
, vol.124
, pp. 803-814
-
-
Chisholm, S.T.1
Coaker, G.2
Day, B.3
Staskawicz, B.J.4
-
28
-
-
84883735982
-
Traditional and modern plant breeding methods with examples in rice (Oryza sativa L.)
-
Breseghello F, Coelho ASG., Traditional and modern plant breeding methods with examples in rice (Oryza sativa L.). J Agric Food Chem. 2013;61:8277–8286
-
(2013)
J Agric Food Chem
, vol.61
, pp. 8277-8286
-
-
Breseghello, F.1
Coelho, A.S.G.2
-
29
-
-
84907749899
-
Cross-bred crops get fit faster
-
Gilbert N., Cross-bred crops get fit faster. Nature. 2014;513:292
-
(2014)
Nature
, vol.513
, pp. 292
-
-
Gilbert, N.1
-
30
-
-
85008890044
-
Pivoting the plant immune system for dissection to deployment
-
Dangl JL, Horvath DM, Staskawicz BJ., Pivoting the plant immune system for dissection to deployment. Science. 2013;16:341
-
(2013)
Science
, vol.16
, pp. 341
-
-
Dangl, J.L.1
Horvath, D.M.2
Staskawicz, B.J.3
-
31
-
-
66649113742
-
Durability of plant major resistance genes to pathogens depends on the genetic background, experimental evidence and consequences for breeding strategies
-
Palloix A, Ayme V, Moury B., Durability of plant major resistance genes to pathogens depends on the genetic background, experimental evidence and consequences for breeding strategies. New Phytol. 2009;183:190–199
-
(2009)
New Phytol
, vol.183
, pp. 190-199
-
-
Palloix, A.1
Ayme, V.2
Moury, B.3
-
32
-
-
84902299964
-
Enhancing crop resilience to combined abiotic and biotic stress through the dissection of physiological and molecular crosstalk
-
Kissoudis C, van de Wiel C, Visser RGF, van der Linden G., Enhancing crop resilience to combined abiotic and biotic stress through the dissection of physiological and molecular crosstalk. Front Plant Sci. 2014;5:207
-
(2014)
Front Plant Sci
, vol.5
, pp. 207
-
-
Kissoudis, C.1
van de Wiel, C.2
Visser, R.G.F.3
van der Linden, G.4
-
33
-
-
0036888811
-
A comparison between crop domestication, classical plant breeding, and genetic engineering. Crop
-
Gepts P., A comparison between crop domestication, classical plant breeding, and genetic engineering. Crop Sci. 2002;42:1780–1790
-
(2002)
Sci
, vol.42
, pp. 1780-1790
-
-
Gepts, P.1
-
34
-
-
84900885927
-
What are the prospects for genetically engineered, disease resistant plants?
-
Collinge DB, Søgaard L, Thordal-Christensen H., What are the prospects for genetically engineered, disease resistant plants? Eur J Plant Pathol. 2008;121:217–231
-
(2008)
Eur J Plant Pathol
, vol.121
, pp. 217-231
-
-
Collinge, D.B.1
Søgaard, L.2
Thordal-Christensen, H.3
-
35
-
-
84941996689
-
Transcriptomics-based analysis using RNA-Seq of the coconut (Cocos nucifera) leaf in response to yellow decline phytoplasma infection
-
Nejat N, Cahill D, Vadamalai G, et al. Transcriptomics-based analysis using RNA-Seq of the coconut (Cocos nucifera) leaf in response to yellow decline phytoplasma infection. Mol Genet Genomics 2015;290:1899–910
-
(2015)
Mol Genet Genomics
, vol.290
, pp. 1899-1910
-
-
Nejat, N.1
Cahill, D.2
Vadamalai, G.3
-
36
-
-
84906767226
-
Glomus mosseae bioprotection against aster yellows phytoplasma (16srI-B) and Spiroplasma citri Infection in Madagascar Periwinkle
-
Tahat M, Nejat N, Sijam K., Glomus mosseae bioprotection against aster yellows phytoplasma (16srI-B) and Spiroplasma citri Infection in Madagascar Periwinkle. Physiol Mol Plant Pathol. 2014;88:1–9
-
(2014)
Physiol Mol Plant Pathol
, vol.88
, pp. 1-9
-
-
Tahat, M.1
Nejat, N.2
Sijam, K.3
-
38
-
-
84899513904
-
Sulfonamides identified as plant immune-priming compounds in high-throughput chemical screening increase disease resistance in Arabidopsis thaliana
-
Noutoshi Y, Ikeda M, Saito T, et al. Sulfonamides identified as plant immune-priming compounds in high-throughput chemical screening increase disease resistance in Arabidopsis thaliana. Front Plant Sci. 2012;3:245
-
(2012)
Front Plant Sci
, vol.3
, pp. 245
-
-
Noutoshi, Y.1
Ikeda, M.2
Saito, T.3
-
39
-
-
84868145612
-
Novel plant immune-priming compounds identified via high-throughput chemical screening target salicylic acid glucosyltransferases in Arabidopsis
-
Noutoshi Y, Okazaki M, Kida T, et al. Novel plant immune-priming compounds identified via high-throughput chemical screening target salicylic acid glucosyltransferases in Arabidopsis. Plant Cell. 2012;24:3795–3804
-
(2012)
Plant Cell
, vol.24
, pp. 3795-3804
-
-
Noutoshi, Y.1
Okazaki, M.2
Kida, T.3
-
40
-
-
84979500648
-
Preparing to fight back: generation and storage of priming compounds
-
Pastor V, Balmer A, Gamir J, et al. Preparing to fight back:generation and storage of priming compounds. Front Plant Sci. 2014;5:295
-
(2014)
Front Plant Sci
, vol.5
, pp. 295
-
-
Pastor, V.1
Balmer, A.2
Gamir, J.3
-
41
-
-
84922099962
-
Priming as a mechanism behind induced resistance against pathogens, insects and abiotic stress
-
Ton J, van der Ent S, van Hulten M, et al. Priming as a mechanism behind induced resistance against pathogens, insects and abiotic stress. IOBC-WPRS Bull. 2009;44:3–13
-
(2009)
IOBC-WPRS Bull
, vol.44
, pp. 3-13
-
-
Ton, J.1
van der Ent, S.2
van Hulten, M.3
-
42
-
-
80053324376
-
Molecular aspects of defence priming
-
Conrath U., Molecular aspects of defence priming. Trends Plant Sci. 2011;16:524–531
-
(2011)
Trends Plant Sci
, vol.16
, pp. 524-531
-
-
Conrath, U.1
-
44
-
-
59749094857
-
Emerging concepts in effector biology of plant-associated organisms.
-
Hogenhout SA, Van der Hoorn RA, Terauchi R, Kamoun S., Emerging concepts in effector biology of plant-associated organisms. Mol Plant Microbe Interact. 2009;22:115–122
-
(2009)
Mol Plant Microbe Interact
, vol.22
, pp. 115-122
-
-
Hogenhout, S.A.1
Van der Hoorn, R.A.2
Terauchi, R.3
Kamoun, S.4
-
45
-
-
84907344027
-
Unconventionally secreted effectors of two filamentous pathogens target plant salicylate biosynthesis
-
Liu T, Song T, Zhang X, et al. Unconventionally secreted effectors of two filamentous pathogens target plant salicylate biosynthesis. Nat Commun. 2014;5:4686
-
(2014)
Nat Commun
, vol.5
, pp. 4686
-
-
Liu, T.1
Song, T.2
Zhang, X.3
-
46
-
-
84901436127
-
Filamentous pathogen effector functions: of pathogens, hosts and microbiomes
-
Rovenich H, Boshoven JC, Thomma B., Filamentous pathogen effector functions:of pathogens, hosts and microbiomes. Curr Opin Plant Biol. 2014;20:96–103
-
(2014)
Curr Opin Plant Biol
, vol.20
, pp. 96-103
-
-
Rovenich, H.1
Boshoven, J.C.2
Thomma, B.3
-
47
-
-
84876704413
-
Genome analyses of the wheat yellows (stripe) rust pathogen Puccinia striiformis f. sp. tritici reveal polymorphic and haustorial expressed secreted proteins as candidate effectors
-
Cantu D, Segovia V, MacLean D, et al. Genome analyses of the wheat yellows (stripe) rust pathogen Puccinia striiformis f. sp. tritici reveal polymorphic and haustorial expressed secreted proteins as candidate effectors. BMC Genomics. 2013;14:270
-
(2013)
BMC Genomics
, vol.14
, pp. 270
-
-
Cantu, D.1
Segovia, V.2
MacLean, D.3
-
48
-
-
33748334490
-
A catalogue of the effector secretome of plant pathogenic oomycetes
-
Kamoun S., A catalogue of the effector secretome of plant pathogenic oomycetes. Annu Rev Phytopathol. 2006;44:41–60
-
(2006)
Annu Rev Phytopathol
, vol.44
, pp. 41-60
-
-
Kamoun, S.1
-
49
-
-
80051774062
-
Understanding and exploiting late blight resistance in the age of effectors
-
Vleeshouwers VG, Raffaele S, Vossen JH, et al. Understanding and exploiting late blight resistance in the age of effectors. Annu Rev Phytopathol. 2011;49:507–531
-
(2011)
Annu Rev Phytopathol
, vol.49
, pp. 507-531
-
-
Vleeshouwers, V.G.1
Raffaele, S.2
Vossen, J.H.3
-
50
-
-
70350235032
-
Roadmap for future research on plant pathogen effectors
-
Alfano JR., Roadmap for future research on plant pathogen effectors. Mol Plant Pathol. 2009;10:805–813
-
(2009)
Mol Plant Pathol
, vol.10
, pp. 805-813
-
-
Alfano, J.R.1
-
51
-
-
84893657208
-
Effectors as tools in disease resistance breeding against biotrophic, hemibiotrophic, and necrotrophic plant pathogens
-
Vleeshouwers VGAA, Oliver RP., Effectors as tools in disease resistance breeding against biotrophic, hemibiotrophic, and necrotrophic plant pathogens. Mol Plant Microbe Interact. 2014;27:196–206
-
(2014)
Mol Plant Microbe Interact
, vol.27
, pp. 196-206
-
-
Vleeshouwers, V.G.A.A.1
Oliver, R.P.2
-
52
-
-
21344468875
-
R gene expression induced by a typeIII effector triggers disease resistance in rice
-
Gu K, Yang B, Tian D, et al. R gene expression induced by a typeIII effector triggers disease resistance in rice. Nature. 2005;435:1122–1125
-
(2005)
Nature
, vol.435
, pp. 1122-1125
-
-
Gu, K.1
Yang, B.2
Tian, D.3
-
53
-
-
84869763999
-
RNA-seq pinpoints a Xanthomonas TAL-effector activated resistance gene in a large-crop genome
-
Strauss T, Van Poecke RM, Strauss A, et al. RNA-seq pinpoints a Xanthomonas TAL-effector activated resistance gene in a large-crop genome. Proc Natl Acad Sci USA. 2012;109:19480–19485
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, pp. 19480-19485
-
-
Strauss, T.1
Van Poecke, R.M.2
Strauss, A.3
-
54
-
-
84922990057
-
XA23 is an executor R protein and confers broad-spectrum disease resistance in rice
-
Wang C, Zhang X, Fan Y, et al. XA23 is an executor R protein and confers broad-spectrum disease resistance in rice. Mol Plant. 2015;8:290–302
-
(2015)
Mol Plant
, vol.8
, pp. 290-302
-
-
Wang, C.1
Zhang, X.2
Fan, Y.3
-
55
-
-
84939570821
-
Genetic engineering of the Xa10 promoter for broad-spectrum and durable resistance to Xanthomonas oryzae pv. oryzae
-
Zeng X, Tian D, Gu K, et al. Genetic engineering of the Xa10 promoter for broad-spectrum and durable resistance to Xanthomonas oryzae pv. oryzae. Plant Biotechnol J. 2015;13:993–1001
-
(2015)
Plant Biotechnol J
, vol.13
, pp. 993-1001
-
-
Zeng, X.1
Tian, D.2
Gu, K.3
-
56
-
-
35548939950
-
Plant pathogen recognition mediated by promoter activation of the pepper Bs3 resistance gene
-
Römer P, Hahn S, Jordan T, et al. Plant pathogen recognition mediated by promoter activation of the pepper Bs3 resistance gene. Science. 2007;318:645–648
-
(2007)
Science
, vol.318
, pp. 645-648
-
-
Römer, P.1
Hahn, S.2
Jordan, T.3
-
57
-
-
84896393298
-
Predicting promoters targeted by TAL effectors in plant genomes: from dream to reality
-
Noël LD, Denancé N, Szure B., Predicting promoters targeted by TAL effectors in plant genomes:from dream to reality. Front Plant Sci. 2013;4:333
-
(2013)
Front Plant Sci
, vol.4
, pp. 333
-
-
Noël, L.D.1
Denancé, N.2
Szure, B.3
-
58
-
-
84876384912
-
The potential of effector-target genes in breeding for plant innate immunity
-
Gawehns F, Cornelissen BJC, Takken FLW., The potential of effector-target genes in breeding for plant innate immunity. Microb Biotechnol. 2013;6:223–229
-
(2013)
Microb Biotechnol
, vol.6
, pp. 223-229
-
-
Gawehns, F.1
Cornelissen, B.J.C.2
Takken, F.L.W.3
-
59
-
-
84890437041
-
Genetic loss of susceptibility: costly route to disease resistance?
-
Hückelhoven R, Eichmann R, Weis C, et al. Genetic loss of susceptibility:costly route to disease resistance? Plant Pathol. 2013;62:56–62
-
(2013)
Plant Pathol
, vol.62
, pp. 56-62
-
-
Hückelhoven, R.1
Eichmann, R.2
Weis, C.3
-
60
-
-
68449085760
-
Loss of susceptibility as a novel breeding strategy for durable and broad-spectrum resistance
-
Pavan S, Jacobsen E, Visser RGF, Bai Y., Loss of susceptibility as a novel breeding strategy for durable and broad-spectrum resistance. Mol Breeding. 2010;25:1–12
-
(2010)
Mol Breeding
, vol.25
, pp. 1-12
-
-
Pavan, S.1
Jacobsen, E.2
Visser, R.G.F.3
Bai, Y.4
-
62
-
-
33750211710
-
mlo-based powdery mildew immunity: silver bullet or simply non-host resistance?
-
Humphry M, Consonni C, Panstruga R., mlo-based powdery mildew immunity:silver bullet or simply non-host resistance? Mol Plant Pathol. 2006;7:605–610
-
(2006)
Mol Plant Pathol
, vol.7
, pp. 605-610
-
-
Humphry, M.1
Consonni, C.2
Panstruga, R.3
-
63
-
-
0000637336
-
Discovery, characterization and exploitation of Mlo powdery mildew resistance in barley
-
Jørgensen JH., Discovery, characterization and exploitation of Mlo powdery mildew resistance in barley. Euphytica. 1992;63:141–152
-
(1992)
Euphytica
, vol.63
, pp. 141-152
-
-
Jørgensen, J.H.1
-
64
-
-
0036037771
-
Genetic gains in Nordic spring barley breeding over sixty years
-
Oritz R, Nurminiemi M, Madsen S, et al. Genetic gains in Nordic spring barley breeding over sixty years. Euphytica. 2002;126:283–289
-
(2002)
Euphytica
, vol.126
, pp. 283-289
-
-
Oritz, R.1
Nurminiemi, M.2
Madsen, S.3
-
65
-
-
33745243363
-
Conserved requirement for a plant host cell protein in powdery mildew pathogenesis
-
Consonni C, Humphry ME, Hartmann HA, et al. Conserved requirement for a plant host cell protein in powdery mildew pathogenesis. Nat Genet. 2006;38:716–720
-
(2006)
Nat Genet
, vol.38
, pp. 716-720
-
-
Consonni, C.1
Humphry, M.E.2
Hartmann, H.A.3
-
66
-
-
80055106589
-
Durable broad-spectrum powdery mildew resistance in pea er1 plants is conferred by natural loss-of-function mutations inPsMLO1
-
Humphry M, Reinstädler A, Ivanov S, et al. Durable broad-spectrum powdery mildew resistance in pea er1 plants is conferred by natural loss-of-function mutations inPsMLO1. Mol Plant Pathol. 2011;12:866–878
-
(2011)
Mol Plant Pathol
, vol.12
, pp. 866-878
-
-
Humphry, M.1
Reinstädler, A.2
Ivanov, S.3
-
67
-
-
80855147507
-
Pea powdery mildew er1 resistance is associated to loss-of-function mutations at a MLO homologous locus
-
Pavan S, Schiavulli A, Appiano M, et al. Pea powdery mildew er1 resistance is associated to loss-of-function mutations at a MLO homologous locus. Theor Appl Genet. 2011;123:1425–1431
-
(2011)
Theor Appl Genet
, vol.123
, pp. 1425-1431
-
-
Pavan, S.1
Schiavulli, A.2
Appiano, M.3
-
68
-
-
84880828734
-
Loss of function in Mlo orthologs reduces susceptibility of pepper and tomato to powdery mildew disease caused by Leveillula taurica
-
Zheng Z, Nonoruma T, Appiano M, et al. Loss of function in Mlo orthologs reduces susceptibility of pepper and tomato to powdery mildew disease caused by Leveillula taurica. PLoS One. 2013;8:e70723
-
(2013)
PLoS One
, vol.8
, pp. e70723
-
-
Zheng, Z.1
Nonoruma, T.2
Appiano, M.3
-
69
-
-
84890377033
-
Fitness costs and trade-offs of disease resistance and their consequences for breeding arable crops
-
Brown JKM, Rant JC., Fitness costs and trade-offs of disease resistance and their consequences for breeding arable crops. Plant Pathol. 2013;62:83–95
-
(2013)
Plant Pathol
, vol.62
, pp. 83-95
-
-
Brown, J.K.M.1
Rant, J.C.2
-
70
-
-
84903363198
-
A trade off between mlo resistance to powdery mildew and increased susceptibility of barley to a newly important disease, Ramularia leaf spot
-
McGrann GRD, Stavrinides A, Russell J, et al. A trade off between mlo resistance to powdery mildew and increased susceptibility of barley to a newly important disease, Ramularia leaf spot. J Exp Bot. 2014;65:1025–1037
-
(2014)
J Exp Bot
, vol.65
, pp. 1025-1037
-
-
McGrann, G.R.D.1
Stavrinides, A.2
Russell, J.3
-
71
-
-
0033018398
-
The ambivalence of the barley Mlo locus: mutations conferring resistance against powdery mildew (Blumeria graminis f. sp., hordei) enhance susceptibility to the rice blast fungus Magnaporthe grisea
-
Jarosch B, Kogel KH, Schaffrath U., The ambivalence of the barley Mlo locus:mutations conferring resistance against powdery mildew (Blumeria graminis f. sp., hordei) enhance susceptibility to the rice blast fungus Magnaporthe grisea. Mol Plant Microbe Interact. 1999;12:508–514
-
(1999)
Mol Plant Microbe Interact
, vol.12
, pp. 508-514
-
-
Jarosch, B.1
Kogel, K.H.2
Schaffrath, U.3
-
72
-
-
0035136492
-
A compromised Mlo pathway affects the response of barley to the necrotrophic fungus Bipolaris sorokiniana (telemorph: Cochliobolus sativus) and its toxins
-
Kumar J, Huckelhoven R, Beckhove U, et al. A compromised Mlo pathway affects the response of barley to the necrotrophic fungus Bipolaris sorokiniana (telemorph:Cochliobolus sativus) and its toxins. Phytopathology. 2001;91:127–133
-
(2001)
Phytopathology
, vol.91
, pp. 127-133
-
-
Kumar, J.1
Huckelhoven, R.2
Beckhove, U.3
-
73
-
-
28044447217
-
Infection patterns in barley and wheat spikes inoculated with wild-type and trichodiene synthase gene disrupted Fusarium graminearum
-
Jansen C, von Wettstein D, Schafer W, et al. Infection patterns in barley and wheat spikes inoculated with wild-type and trichodiene synthase gene disrupted Fusarium graminearum. Proc Natl Acad Sci USA. 2005;102:16892–16897
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 16892-16897
-
-
Jansen, C.1
von Wettstein, D.2
Schafer, W.3
-
74
-
-
33745894351
-
Os8N3 is a host disease-susceptibility gene for bacterial blight of rice
-
Yang B, Sugio A, White FF., Os8N3 is a host disease-susceptibility gene for bacterial blight of rice. Proc Nat Acad Sci USA. 2006;103:10503–10508
-
(2006)
Proc Nat Acad Sci USA
, vol.103
, pp. 10503-10508
-
-
Yang, B.1
Sugio, A.2
White, F.F.3
-
75
-
-
84878294813
-
Rice MtN3/Saliva/SWEET family genes and their homologs in cellular organisms
-
Yuan M, Wang S., Rice MtN3/Saliva/SWEET family genes and their homologs in cellular organisms. Mol Plant. 2013;6:665–674
-
(2013)
Mol Plant
, vol.6
, pp. 665-674
-
-
Yuan, M.1
Wang, S.2
-
76
-
-
84880251790
-
Breaking the DNA-binding code of Ralstonia solanacearum TAL effectors provides new possibilities to generate plant resistance genes against bacterial wilt disease
-
de Lange O, Schreiber T, Schandry N, et al. Breaking the DNA-binding code of Ralstonia solanacearum TAL effectors provides new possibilities to generate plant resistance genes against bacterial wilt disease. New Phytol. 2013;199:773–786
-
(2013)
New Phytol
, vol.199
, pp. 773-786
-
-
de Lange, O.1
Schreiber, T.2
Schandry, N.3
-
77
-
-
84922858214
-
TAL effectors: tools for DNA targeting
-
Jankele R, Svoboda P., TAL effectors:tools for DNA targeting. Brief Funct Genomics. 2014;13:409–419
-
(2014)
Brief Funct Genomics
, vol.13
, pp. 409-419
-
-
Jankele, R.1
Svoboda, P.2
-
78
-
-
72149090954
-
A simple cipher governs DNA recognition by TAL effectors
-
Moscou MJ, Bogdanove AJ., A simple cipher governs DNA recognition by TAL effectors. Science. 2009;326:1501
-
(2009)
Science
, vol.326
, pp. 1501
-
-
Moscou, M.J.1
Bogdanove, A.J.2
-
79
-
-
72149110399
-
Breaking the code of DNA binding specificity of TAL-type III effectors
-
Boch J, Scholze H, Schornack S, et al. Breaking the code of DNA binding specificity of TAL-type III effectors. Science. 2009;326:1509–1512
-
(2009)
Science
, vol.326
, pp. 1509-1512
-
-
Boch, J.1
Scholze, H.2
Schornack, S.3
-
80
-
-
77955737033
-
Promoter elements of rice susceptibility genes are bound and activated by specific TAL effectors from the bacterial blight pathogen, Xanthomonas oryzae pv. oryzae
-
Römer P, Recht S, Strauss T, et al. Promoter elements of rice susceptibility genes are bound and activated by specific TAL effectors from the bacterial blight pathogen, Xanthomonas oryzae pv. oryzae. New Phytol. 2010;187:1048–1057
-
(2010)
New Phytol
, vol.187
, pp. 1048-1057
-
-
Römer, P.1
Recht, S.2
Strauss, T.3
-
81
-
-
84881454574
-
Engineering plant disease resistance based on TAL effectors
-
Schornack S, Moscou MJ, Ward ER, Horvath DM., Engineering plant disease resistance based on TAL effectors. Annu Rev Phytopathol. 2013;51:383–406
-
(2013)
Annu Rev Phytopathol
, vol.51
, pp. 383-406
-
-
Schornack, S.1
Moscou, M.J.2
Ward, E.R.3
Horvath, D.M.4
-
82
-
-
84856461613
-
Method of the year 2011
-
Becker M., Method of the year 2011. Nat Methods. 2012;9:1
-
(2012)
Nat Methods
, vol.9
, pp. 1
-
-
Becker, M.1
-
83
-
-
84871519181
-
TALENs: a widely applicable technology for targeted genome editing
-
Joung JK, Sander JD., TALENs:a widely applicable technology for targeted genome editing. Nat Rev Mol Cell Biol. 2013;14:49–55
-
(2013)
Nat Rev Mol Cell Biol
, vol.14
, pp. 49-55
-
-
Joung, J.K.1
Sander, J.D.2
-
84
-
-
84938521400
-
Genome editing with engineered nucleases in plants
-
Osakabe Y, Osakabe K., Genome editing with engineered nucleases in plants. Plant Cell Physiol. 2015;56:389–400
-
(2015)
Plant Cell Physiol
, vol.56
, pp. 389-400
-
-
Osakabe, Y.1
Osakabe, K.2
-
85
-
-
84921900348
-
Gene targeting and editing in crop plants: a new era of precision opportunities
-
Rinaldo AR, Ayliffe M., Gene targeting and editing in crop plants:a new era of precision opportunities. Mol Breeding. 2015;35:40
-
(2015)
Mol Breeding
, vol.35
, pp. 40
-
-
Rinaldo, A.R.1
Ayliffe, M.2
-
86
-
-
85008886949
-
The next generation of biotechnology for apple improvement and beyond, the tale of TALENs and TALEs
-
Xu K., The next generation of biotechnology for apple improvement and beyond, the tale of TALENs and TALEs. NY Fruit Quart. 2012;20:17–20
-
(2012)
NY Fruit Quart
, vol.20
, pp. 17-20
-
-
Xu, K.1
-
87
-
-
77953229115
-
The mechanism of double-strand DNA break repair by the nonhomologous DNA end-joining pathway
-
Lieber MR., The mechanism of double-strand DNA break repair by the nonhomologous DNA end-joining pathway. Annu Rev Biochem. 2010;79:181–211
-
(2010)
Annu Rev Biochem
, vol.79
, pp. 181-211
-
-
Lieber, M.R.1
-
88
-
-
84865364870
-
Playing the end game: DNA double-strand break repair pathway choice
-
Chapman JR, Taylor MR, Boulton SJ., Playing the end game:DNA double-strand break repair pathway choice. Mol Cell. 2012;47:497–510
-
(2012)
Mol Cell
, vol.47
, pp. 497-510
-
-
Chapman, J.R.1
Taylor, M.R.2
Boulton, S.J.3
-
89
-
-
84885780340
-
Targeted mutagenesis of Arabidopsis thaliana using engineered TAL effector nucleases
-
Christian M, Qi Y, Zhang Y, Voytas DF., Targeted mutagenesis of Arabidopsis thaliana using engineered TAL effector nucleases. G3 (Bethesda). 2013;3:1697–1705
-
(2013)
G3 (Bethesda)
, vol.3
, pp. 1697-1705
-
-
Christian, M.1
Qi, Y.2
Zhang, Y.3
Voytas, D.F.4
-
90
-
-
84880737219
-
Rapid and efficient gene modification in rice and Brachypodium using TALENs
-
Shan Q, Wang Y, Chen K, et al. Rapid and efficient gene modification in rice and Brachypodium using TALENs. Mol Plant. 2013;6:1365–1368
-
(2013)
Mol Plant
, vol.6
, pp. 1365-1368
-
-
Shan, Q.1
Wang, Y.2
Chen, K.3
-
91
-
-
84884350172
-
TAL effector nucleases induce mutations at a pre-selected location in the genome of primary barley transformants
-
Wendt T, Holm PB, Starker CG, et al. TAL effector nucleases induce mutations at a pre-selected location in the genome of primary barley transformants. Plant Mol Biol. 2013;83:279–285
-
(2013)
Plant Mol Biol
, vol.83
, pp. 279-285
-
-
Wendt, T.1
Holm, P.B.2
Starker, C.G.3
-
92
-
-
84939569705
-
Heritable site-specific mutagenesis using TALENs in maize
-
Char SN, Unger-Wallace E, Frame B, et al. Heritable site-specific mutagenesis using TALENs in maize. Plant Biotechnol J. 2015;13:1002–1010
-
(2015)
Plant Biotechnol J
, vol.13
, pp. 1002-1010
-
-
Char, S.N.1
Unger-Wallace, E.2
Frame, B.3
-
93
-
-
84894321885
-
Targeted Mutagenesis in Zea mays Using TALENs and the CRISPR/Cas system
-
Liang Z, Zhang K, Chen K, Gao C., Targeted Mutagenesis in Zea mays Using TALENs and the CRISPR/Cas system. J Genet Genomics. 2013;41:63–68
-
(2013)
J Genet Genomics
, vol.41
, pp. 63-68
-
-
Liang, Z.1
Zhang, K.2
Chen, K.3
Gao, C.4
-
94
-
-
84860736700
-
High-efficiency TALEN-based gene editing produces disease-resistant rice
-
Li T, Liu B, Spalding MH, et al. High-efficiency TALEN-based gene editing produces disease-resistant rice. Nat Biotechnol. 2012;30:390–392
-
(2012)
Nat Biotechnol
, vol.30
, pp. 390-392
-
-
Li, T.1
Liu, B.2
Spalding, M.H.3
-
95
-
-
84860747716
-
FLASH assembly of TALENs for high-throughput genome editing
-
Reyon D, Tsai SQ, Khyter C, et al. FLASH assembly of TALENs for high-throughput genome editing. Nat Biotechnol. 2012;30:460–465
-
(2012)
Nat Biotechnol
, vol.30
, pp. 460-465
-
-
Reyon, D.1
Tsai, S.Q.2
Khyter, C.3
-
96
-
-
84872203111
-
A ligation-independent cloning technique for high-throughput assembly of transcription activator-like effector genes
-
Schmid-Burgk JL, Schmidt T, Kaiser V, et al. A ligation-independent cloning technique for high-throughput assembly of transcription activator-like effector genes. Nat Biotechnol. 2013;31:76–81
-
(2013)
Nat Biotechnol
, vol.31
, pp. 76-81
-
-
Schmid-Burgk, J.L.1
Schmidt, T.2
Kaiser, V.3
-
97
-
-
79960064013
-
Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting
-
Cermak T, Doyle EL, Christian M, et al. Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting. Nucleic Acids Res. 2011;39:e82
-
(2011)
Nucleic Acids Res
, vol.39
, pp. e82
-
-
Cermak, T.1
Doyle, E.L.2
Christian, M.3
-
99
-
-
84864475122
-
TAL effector-nucleotide targeter (TALE-NT) 2.0: tools for TAL effector design and target prediction
-
Doyle EL, Booher NJ, Standage DS, et al. TAL effector-nucleotide targeter (TALE-NT) 2.0:tools for TAL effector design and target prediction. Nucleic Acids Res. 2012;40:W117–W122
-
(2012)
Nucleic Acids Res
, vol.40
, pp. W117-W122
-
-
Doyle, E.L.1
Booher, N.J.2
Standage, D.S.3
-
100
-
-
84861170955
-
A transcription activator-like effector toolbox for genome engineering
-
Sanjana NE, Cong L, Zhou Y, et al. A transcription activator-like effector toolbox for genome engineering. Nat Protoc. 2012;7:171–192
-
(2012)
Nat Protoc
, vol.7
, pp. 171-192
-
-
Sanjana, N.E.1
Cong, L.2
Zhou, Y.3
-
101
-
-
84888081689
-
ETALEN: a web tool to design TALENs for genome engineering
-
Heigwer F, Kerr G, Walther N, et al. ETALEN:a web tool to design TALENs for genome engineering. Nucleic Acids Res. 2013;41:e190
-
(2013)
Nucleic Acids Res
, vol.41
, pp. e190
-
-
Heigwer, F.1
Kerr, G.2
Walther, N.3
-
102
-
-
84876009936
-
Computational predictions provide insights into the biology of TAL effector target sites
-
Grau J, Wolf A, Reschke M, et al. Computational predictions provide insights into the biology of TAL effector target sites. PLoS Comput Biol. 2013;9:e1002962
-
(2013)
PLoS Comput Biol
, vol.9
, pp. e1002962
-
-
Grau, J.1
Wolf, A.2
Reschke, M.3
-
103
-
-
84888090695
-
TALENoffer: genome-wide TALEN off-target prediction
-
Grau J, Boch J, Posch S., TALENoffer:genome-wide TALEN off-target prediction. Bioinformatics. 2013;29:2931–2932
-
(2013)
Bioinformatics
, vol.29
, pp. 2931-2932
-
-
Grau, J.1
Boch, J.2
Posch, S.3
-
104
-
-
84872200798
-
Mojo Hand, a TALEN design tool for genome editing applications
-
Neff KL, Argue DP, Ma AC, et al. Mojo Hand, a TALEN design tool for genome editing applications. BMC Bioinformatics. 2013;14:1
-
(2013)
BMC Bioinformatics
, vol.14
, pp. 1
-
-
Neff, K.L.1
Argue, D.P.2
Ma, A.C.3
-
105
-
-
84876565784
-
EENdb: a database and knowledge base of ZFNs and TALENs for endonuclease engineering
-
Xiao A, Wu Y, Yang Z, et al. EENdb:a database and knowledge base of ZFNs and TALENs for endonuclease engineering. Nucleic Acids Res. 2013;41:D415–D422
-
(2013)
Nucleic Acids Res
, vol.41
, pp. D415-D422
-
-
Xiao, A.1
Wu, Y.2
Yang, Z.3
-
106
-
-
84898942101
-
SAPTA: a new design tool for improving TALE nuclease activity
-
Lin Y, Fine EJ, Zheng Z, et al. SAPTA:a new design tool for improving TALE nuclease activity. Nucleic Acids Res. 2014;42:e47
-
(2014)
Nucleic Acids Res
, vol.42
, pp. e47
-
-
Lin, Y.1
Fine, E.J.2
Zheng, Z.3
-
107
-
-
84904813279
-
CHOPCHOP: a CRISPR/Cas9 and TALEN web tool for genome editing
-
Montague TG, Cruz JM, Gagnon JA, et al. CHOPCHOP:a CRISPR/Cas9 and TALEN web tool for genome editing. Nucleic Acids Res. 2014;42:W401–W407
-
(2014)
Nucleic Acids Res
, vol.42
, pp. W401-W407
-
-
Montague, T.G.1
Cruz, J.M.2
Gagnon, J.A.3
-
108
-
-
41349115471
-
On-line resources for bacterial micro-evolution studies using MLVA or CRISPR typing
-
Grissa I, Bouchon P, Pourcel C, Vergnaud G., On-line resources for bacterial micro-evolution studies using MLVA or CRISPR typing. Biochimie. 2008;90:660–668
-
(2008)
Biochimie
, vol.90
, pp. 660-668
-
-
Grissa, I.1
Bouchon, P.2
Pourcel, C.3
Vergnaud, G.4
-
109
-
-
74249095519
-
CRISPR/Cas, the immune system of bacteria and archaea
-
Horvath P, Barrangou R., CRISPR/Cas, the immune system of bacteria and archaea. Science. 2010;327:167–170
-
(2010)
Science
, vol.327
, pp. 167-170
-
-
Horvath, P.1
Barrangou, R.2
-
110
-
-
77249170201
-
CRISPR interference: RNA-directed adaptive immunity in bacteria and archaea
-
Marraffini LA, Sontheimer EJ., CRISPR interference:RNA-directed adaptive immunity in bacteria and archaea. Nat Rev Genet. 2010;11:181–190
-
(2010)
Nat Rev Genet
, vol.11
, pp. 181-190
-
-
Marraffini, L.A.1
Sontheimer, E.J.2
-
111
-
-
0036267740
-
Identification of genes that are associated with DNA repeats in prokaryotes
-
Jansen R, Embden JD, Gaastra W, Schouls LM., Identification of genes that are associated with DNA repeats in prokaryotes. Mol Microbiol. 2002;43:1565–1575
-
(2002)
Mol Microbiol
, vol.43
, pp. 1565-1575
-
-
Jansen, R.1
Embden, J.D.2
Gaastra, W.3
Schouls, L.M.4
-
112
-
-
16444385662
-
Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements
-
Mojica FJ, Díez-Villaseñor C, García-Martínez J, Soria E., Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements. J Mol Evol. 2005;60:174–182
-
(2005)
J Mol Evol
, vol.60
, pp. 174-182
-
-
Mojica, F.J.1
Díez-Villaseñor, C.2
García-Martínez, J.3
Soria, E.4
-
113
-
-
84902095351
-
Classification and evolution of type II CRISPR-Cas systems
-
Chylinski K, Makarova KS, Charpentier E, Koonin EV., Classification and evolution of type II CRISPR-Cas systems. Nucleic Acids Res. 2014;42:6091–6105
-
(2014)
Nucleic Acids Res
, vol.42
, pp. 6091-6105
-
-
Chylinski, K.1
Makarova, K.S.2
Charpentier, E.3
Koonin, E.V.4
-
114
-
-
79956157571
-
Evolution and classification of the CRISPR-Cas systems
-
Marakova KS, Haft DH, Barrangou R, et al. Evolution and classification of the CRISPR-Cas systems. Nat Rev Microbiol. 2011;9:467–477
-
(2011)
Nat Rev Microbiol
, vol.9
, pp. 467-477
-
-
Marakova, K.S.1
Haft, D.H.2
Barrangou, R.3
-
115
-
-
84926675868
-
RNA-guided CRISPR-Cas technologies for genome-scale investigation of disease processes
-
Humphrey SE, Kasinski A., RNA-guided CRISPR-Cas technologies for genome-scale investigation of disease processes. J Hematol Oncol. 2015;8:31
-
(2015)
J Hematol Oncol
, vol.8
, pp. 31
-
-
Humphrey, S.E.1
Kasinski, A.2
-
116
-
-
84878936806
-
CRISPR-mediated adaptive immune systems in bacteria and archaea
-
Sorek R, Lawrence CM, Wiedenheft B., CRISPR-mediated adaptive immune systems in bacteria and archaea. Annu Rev Biochem. 2013;82:237–266
-
(2013)
Annu Rev Biochem
, vol.82
, pp. 237-266
-
-
Sorek, R.1
Lawrence, C.M.2
Wiedenheft, B.3
-
117
-
-
84865070369
-
A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity
-
Jinek M, Chylinski K, Fonfara I, et al. A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity. Science. 2012;337:816–821
-
(2012)
Science
, vol.337
, pp. 816-821
-
-
Jinek, M.1
Chylinski, K.2
Fonfara, I.3
-
118
-
-
84893157352
-
Structures of Cas9 endonucleases reveal RNA-mediated conformational activation
-
Jinek M, Jiang F, Taylor DW, et al. Structures of Cas9 endonucleases reveal RNA-mediated conformational activation. Science. 2014;343:1247997
-
(2014)
Science
, vol.343
, pp. 1247997
-
-
Jinek, M.1
Jiang, F.2
Taylor, D.W.3
-
119
-
-
84922910242
-
Genome editing in rice and wheat using the CRISPR/Cas system
-
Shan Q, Wang Y, Li J, Gao C., Genome editing in rice and wheat using the CRISPR/Cas system. Nat Protoc. 2014;9:2395–2410
-
(2014)
Nat Protoc
, vol.9
, pp. 2395-2410
-
-
Shan, Q.1
Wang, Y.2
Li, J.3
Gao, C.4
-
120
-
-
84880570576
-
High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells
-
Fu Y, Foden JA, Khayter C, et al. High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells. Nat Biotechnol. 2013;31:822–826
-
(2013)
Nat Biotechnol
, vol.31
, pp. 822-826
-
-
Fu, Y.1
Foden, J.A.2
Khayter, C.3
-
121
-
-
84903545084
-
Genome-wide analysis reveals characteristics of off-target sites bound by the Cas9 endonuclease
-
Kuscu C, Arslan S, Singh R, et al. Genome-wide analysis reveals characteristics of off-target sites bound by the Cas9 endonuclease. Nat Biotechnol. 2014;32:677–683
-
(2014)
Nat Biotechnol
, vol.32
, pp. 677-683
-
-
Kuscu, C.1
Arslan, S.2
Singh, R.3
-
122
-
-
84884160273
-
CAS9 transcriptional activators for target specificity screening and paired nickases for cooperative genome engineering
-
Mali P, Aach J, Stranges PB, et al. CAS9 transcriptional activators for target specificity screening and paired nickases for cooperative genome engineering. Nat Biotechnol. 2013;31:833–838
-
(2013)
Nat Biotechnol
, vol.31
, pp. 833-838
-
-
Mali, P.1
Aach, J.2
Stranges, P.B.3
-
123
-
-
84896929630
-
Improving CRISPR-Cas nuclease specificity using truncated guide RNAs
-
Fu Y, Sander JD, Reyon D, et al. Improving CRISPR-Cas nuclease specificity using truncated guide RNAs. Nat Biotechnol. 2014;32:279–284
-
(2014)
Nat Biotechnol
, vol.32
, pp. 279-284
-
-
Fu, Y.1
Sander, J.D.2
Reyon, D.3
-
124
-
-
84884165315
-
DNA targeting specificity of RNA-guided Cas9 nucleases
-
Hsu PD, Scott DA, Weinstein JA, et al. DNA targeting specificity of RNA-guided Cas9 nucleases. Nat Biotechnol. 2013;31:827–832
-
(2013)
Nat Biotechnol
, vol.31
, pp. 827-832
-
-
Hsu, P.D.1
Scott, D.A.2
Weinstein, J.A.3
-
125
-
-
84884288934
-
Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity
-
Ran FA, Hsu PD, Lin CY, et al. Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity. Cell. 2013;154:1380–1389
-
(2013)
Cell
, vol.154
, pp. 1380-1389
-
-
Ran, F.A.1
Hsu, P.D.2
Lin, C.Y.3
-
126
-
-
84902210542
-
Fusion of catalytically inactive Cas9 to FokI nuclease improves the specificity of genome modification
-
Guilinger JP, Thompson DB, Liu DR., Fusion of catalytically inactive Cas9 to FokI nuclease improves the specificity of genome modification. Nat Biotechnol. 2014;32:577–582
-
(2014)
Nat Biotechnol
, vol.32
, pp. 577-582
-
-
Guilinger, J.P.1
Thompson, D.B.2
Liu, D.R.3
-
127
-
-
84902204289
-
Dimeric CRISPR RNA-guided FokI nucleases for highly specific genome editing
-
Tsai SQ, Wyvekens N, Khayter C, et al. Dimeric CRISPR RNA-guided FokI nucleases for highly specific genome editing. Nat Biotechnol. 2014;32:569–576
-
(2014)
Nat Biotechnol
, vol.32
, pp. 569-576
-
-
Tsai, S.Q.1
Wyvekens, N.2
Khayter, C.3
-
128
-
-
84943368109
-
CRISPR clear? Dimeric Cas9-Fok1 nucleases improve genome-editing specificity
-
Zhang H, Yan Z, Li M, et al. CRISPR clear? Dimeric Cas9-Fok1 nucleases improve genome-editing specificity. Genes Dis. 2014;1:6–7
-
(2014)
Genes Dis
, vol.1
, pp. 6-7
-
-
Zhang, H.1
Yan, Z.2
Li, M.3
-
129
-
-
84903943282
-
Whole-genome sequencing analysis reveals high specificity of CRISPR/Cas9 and TALEN-based genome editing in human iPSCs
-
Smith C, Gore A, Yan W, et al. Whole-genome sequencing analysis reveals high specificity of CRISPR/Cas9 and TALEN-based genome editing in human iPSCs. Cell Stem Cell. 2014;15:12–13
-
(2014)
Cell Stem Cell
, vol.15
, pp. 12-13
-
-
Smith, C.1
Gore, A.2
Yan, W.3
-
130
-
-
84923279864
-
Gene editing: how to stay on-target with CRISPR
-
Marx V., Gene editing:how to stay on-target with CRISPR. Nat Methods. 2014;11:1021–1026
-
(2014)
Nat Methods
, vol.11
, pp. 1021-1026
-
-
Marx, V.1
-
131
-
-
34547579396
-
CRISPRFinder: a web tool to identify clustered regulatory interspaced short palindromic repeats
-
Grissa I, Vergnaud G, Pourcel C., CRISPRFinder:a web tool to identify clustered regulatory interspaced short palindromic repeats. Nucleic Acids Res. 2007;35:W52–W57
-
(2007)
Nucleic Acids Res
, vol.35
, pp. W52-W57
-
-
Grissa, I.1
Vergnaud, G.2
Pourcel, C.3
-
132
-
-
84873729095
-
Multiplex genome engineering using CRISPR/Cas systems
-
Cong L, Ran FA, Cox D, et al. Multiplex genome engineering using CRISPR/Cas systems. Science. 2013;339:819–823
-
(2013)
Science
, vol.339
, pp. 819-823
-
-
Cong, L.1
Ran, F.A.2
Cox, D.3
-
133
-
-
84925434302
-
CasFinder: flexible algorithm for identifying specific Cas9 targets in genomes
-
Aach J, Mali P, Church GM., CasFinder:flexible algorithm for identifying specific Cas9 targets in genomes. bioRxiv. 2014; doi:10.1101/005074
-
(2014)
bioRxiv
-
-
Aach, J.1
Mali, P.2
Church, G.M.3
-
134
-
-
84896308706
-
Cas-OFFinder: a fast and versatile algorithm that searches for potential off-target sites of Cas9 RNA-guided endonucleases
-
Bae S, Park J, Kim JS., Cas-OFFinder:a fast and versatile algorithm that searches for potential off-target sites of Cas9 RNA-guided endonucleases. Bioinformatics. 2014;30:1473–1475
-
(2014)
Bioinformatics
, vol.30
, pp. 1473-1475
-
-
Bae, S.1
Park, J.2
Kim, J.S.3
-
135
-
-
84893287073
-
ECRISP: fast CRISPR target site identification
-
Heigwer F, Kerr G, Boutros M., ECRISP:fast CRISPR target site identification. Nat Methods. 2014;11:122–123
-
(2014)
Nat Methods
, vol.11
, pp. 122-123
-
-
Heigwer, F.1
Kerr, G.2
Boutros, M.3
-
136
-
-
84898889321
-
CasOT: a genome-wide Cas9/gRNA off-target searching tool
-
Xiao A, Cheng Z, Kong L, et al. CasOT:a genome-wide Cas9/gRNA off-target searching tool. Bioinformatics. 2014;30:1180–1182
-
(2014)
Bioinformatics
, vol.30
, pp. 1180-1182
-
-
Xiao, A.1
Cheng, Z.2
Kong, L.3
-
137
-
-
84903549014
-
sgRNAcas9: a software package for designing CRISPR sgRNA and evaluating potential off-target cleavage sites
-
Xie S, Shen B, Zhang C, et al. sgRNAcas9:a software package for designing CRISPR sgRNA and evaluating potential off-target cleavage sites. PLoS One. 2014;9:e100448
-
(2014)
PLoS One
, vol.9
, pp. e100448
-
-
Xie, S.1
Shen, B.2
Zhang, C.3
-
138
-
-
84929142256
-
CRISPRdirect: software for designing CRISPR/Cas guide RNA with reduced off-target sites
-
Naito Y, Hino K, Bono H, Ui-Tei K., CRISPRdirect:software for designing CRISPR/Cas guide RNA with reduced off-target sites. Bioinformatics. 2015;31:1120–1123
-
(2015)
Bioinformatics
, vol.31
, pp. 1120-1123
-
-
Naito, Y.1
Hino, K.2
Bono, H.3
Ui-Tei, K.4
-
139
-
-
84924333960
-
Off-Spotter”: very fast and exhaustive enumeration of genomic lookalikes for designing CRISPR/Cas guide RNAs
-
Pliatsika V, Rigoutsos I., “Off-Spotter”:very fast and exhaustive enumeration of genomic lookalikes for designing CRISPR/Cas guide RNAs. Biol Direct. 2015;10:4
-
(2015)
Biol Direct
, vol.10
, pp. 4
-
-
Pliatsika, V.1
Rigoutsos, I.2
-
140
-
-
84929377243
-
CRISPR multitargeter: a web tool to find common and unique CRISPR single guide RNA targets in a set of similar sequences
-
Prykhozhij SV, Rajan V, Gaston D, Berman JN., CRISPR multitargeter:a web tool to find common and unique CRISPR single guide RNA targets in a set of similar sequences. PLoS One. 2015;10:e0119372
-
(2015)
PLoS One
, vol.10
, pp. e0119372
-
-
Prykhozhij, S.V.1
Rajan, V.2
Gaston, D.3
Berman, J.N.4
-
141
-
-
84929494345
-
CCTop: an intuitive, flexible and reliable CRISPR/Cas9 target prediction tool
-
Stemmer M, Thumberger T, del Sol Keyer M, et al. CCTop:an intuitive, flexible and reliable CRISPR/Cas9 target prediction tool. PLoS One. 2015;10:e0124633
-
(2015)
PLoS One
, vol.10
, pp. e0124633
-
-
Stemmer, M.1
Thumberger, T.2
del Sol Keyer, M.3
-
143
-
-
84920262090
-
The CRISPR/Cas9 system for plant genome editing and beyond
-
Bortesi L, Fischer R., The CRISPR/Cas9 system for plant genome editing and beyond. Biotechnol Adv. 2015;33:41–52
-
(2015)
Biotechnol Adv
, vol.33
, pp. 41-52
-
-
Bortesi, L.1
Fischer, R.2
-
144
-
-
84875963894
-
Enhanced efficiency of human pluripotent stem cell genome editing through replacing TALENs with CRISPRs
-
Ding Q, Regan SN, Xia Y, et al. Enhanced efficiency of human pluripotent stem cell genome editing through replacing TALENs with CRISPRs. Cell Stem Cell. 2013;12:393–394
-
(2013)
Cell Stem Cell
, vol.12
, pp. 393-394
-
-
Ding, Q.1
Regan, S.N.2
Xia, Y.3
-
145
-
-
84885181396
-
Efficient genome editing in plants using a CRISPR/Cas system
-
Feng Z, Zhang b, Ding W, et al. Efficient genome editing in plants using a CRISPR/Cas system. Cell Res. 2013;23:1229–1232
-
(2013)
Cell Res
, vol.23
, pp. 1229-1232
-
-
Feng, Z.1
Zhang, B.2
Ding, W.3
-
146
-
-
84964313841
-
A CRISPR/Cas9 toolkit for multiplex genome editing in plants
-
Xing HL, Dong L, Wang Z-P, et al. A CRISPR/Cas9 toolkit for multiplex genome editing in plants. BMC Plant Biol. 2014;14:327
-
(2014)
BMC Plant Biol
, vol.14
, pp. 327
-
-
Xing, H.L.1
Dong, L.2
Wang, Z.-P.3
-
147
-
-
84885353478
-
Plant genome editing made easy: targeted mutagenesis in model and crop plants using the CRISPR/Cas system
-
Belhaj K, Chaparro-Garcia A, Kamoun S, Nekrasov V., Plant genome editing made easy:targeted mutagenesis in model and crop plants using the CRISPR/Cas system. Plant Methods. 2013;9:39
-
(2013)
Plant Methods
, vol.9
, pp. 39
-
-
Belhaj, K.1
Chaparro-Garcia, A.2
Kamoun, S.3
Nekrasov, V.4
-
148
-
-
84908584019
-
Efficient gene editing in tomato in the first generation using the clustered regulatory interspaces short palindromic repeats/CRISPR-associated9 system
-
Brooks C, Nekrasov V, Lippman ZB, Van Eck J., Efficient gene editing in tomato in the first generation using the clustered regulatory interspaces short palindromic repeats/CRISPR-associated9 system. Plant Physiol. 2014;166:1292–1297
-
(2014)
Plant Physiol
, vol.166
, pp. 1292-1297
-
-
Brooks, C.1
Nekrasov, V.2
Lippman, Z.B.3
Van Eck, J.4
-
149
-
-
84899556051
-
Targeted genome editing of sweet orange using Cas9/sgRNA
-
Jia H, Wang N., Targeted genome editing of sweet orange using Cas9/sgRNA. PLoS One. 2014;9:e93806
-
(2014)
PLoS One
, vol.9
, pp. e93806
-
-
Jia, H.1
Wang, N.2
-
150
-
-
84886926151
-
Demonstration of CRISPR/CAS9/sgRNA-mediated targeted gene modification in Arabidopsis, tobacco, sorghum and rice
-
Jiang W, Zhou H, Bi H, et al. Demonstration of CRISPR/CAS9/sgRNA-mediated targeted gene modification in Arabidopsis, tobacco, sorghum and rice. Nucleic Acids Res. 2013;41:e188
-
(2013)
Nucleic Acids Res
, vol.41
, pp. e188
-
-
Jiang, W.1
Zhou, H.2
Bi, H.3
-
151
-
-
84921934205
-
Simultaneous editing of three homoeoalleles in hexaploid bread wheat confers heritable resistance to powdery mildew
-
Wang Y, Cheng X, Shan Q, et al. Simultaneous editing of three homoeoalleles in hexaploid bread wheat confers heritable resistance to powdery mildew. Nat Biotechnol. 2014;32:947–951
-
(2014)
Nat Biotechnol
, vol.32
, pp. 947-951
-
-
Wang, Y.1
Cheng, X.2
Shan, Q.3
-
152
-
-
84882986957
-
Programmable repression and activation of bacterial gene expression using an engineered CRISPR-Cas system
-
Bikard D, Jiang WY, Samai P, et al. Programmable repression and activation of bacterial gene expression using an engineered CRISPR-Cas system. Nucleic Acids Res. 2013;41:7429–7437
-
(2013)
Nucleic Acids Res
, vol.41
, pp. 7429-7437
-
-
Bikard, D.1
Jiang, W.Y.2
Samai, P.3
-
153
-
-
84885180675
-
Multiplexed activation of endogenous genes by CRISPR-on, an RNA-guided transcriptional activator system
-
Cheng AW, Wang H, Yang H, et al. Multiplexed activation of endogenous genes by CRISPR-on, an RNA-guided transcriptional activator system. Cell Res. 2013;23:1163–1171
-
(2013)
Cell Res
, vol.23
, pp. 1163-1171
-
-
Cheng, A.W.1
Wang, H.2
Yang, H.3
-
154
-
-
84874687019
-
Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression
-
Qi LS, Larson MH, Gilbert LA, et al. Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression. Cell. 2013;152:1173–1183
-
(2013)
Cell
, vol.152
, pp. 1173-1183
-
-
Qi, L.S.1
Larson, M.H.2
Gilbert, L.A.3
-
155
-
-
84892765883
-
Genome-scale CRISPR-Cas9 knockout screening in human cells
-
Shalem Q, Sanjana NE, Hartenian E, et al. Genome-scale CRISPR-Cas9 knockout screening in human cells. Science. 2014;343:84–87
-
(2014)
Science
, vol.343
, pp. 84-87
-
-
Shalem, Q.1
Sanjana, N.E.2
Hartenian, E.3
-
156
-
-
84920269807
-
Correction of a genetic disease by CRISPR-Cas9-mediated gene editing in mouse spermatogonial stem cells
-
Wu Y, Zhou H, Fan X, et al. Correction of a genetic disease by CRISPR-Cas9-mediated gene editing in mouse spermatogonial stem cells. Cell Res. 2015;25:67–79
-
(2015)
Cell Res
, vol.25
, pp. 67-79
-
-
Wu, Y.1
Zhou, H.2
Fan, X.3
-
157
-
-
84903555108
-
Allele-specific genome editing and correction of disease-associated phenotypes in rats using the CRISPR-Cas platform
-
Yoshima K, Kaneko B, Viogt B, Mashimo T., Allele-specific genome editing and correction of disease-associated phenotypes in rats using the CRISPR-Cas platform. Nat Commun. 2014;5:4240
-
(2014)
Nat Commun
, vol.5
, pp. 4240
-
-
Yoshima, K.1
Kaneko, B.2
Viogt, B.3
Mashimo, T.4
-
158
-
-
84886993480
-
CRISPR interference (CRISPRi) for sequence-specific control of gene expression
-
Larson MH, Gilbert LA, Wang X, et al. CRISPR interference (CRISPRi) for sequence-specific control of gene expression. Nat Protoc. 2013;8:2180–2196
-
(2013)
Nat Protoc
, vol.8
, pp. 2180-2196
-
-
Larson, M.H.1
Gilbert, L.A.2
Wang, X.3
-
159
-
-
84919634760
-
Specific gene repression by CRISPRi system transferred through bacterial conjugation
-
Ji W, Lee D, Wong E, et al. Specific gene repression by CRISPRi system transferred through bacterial conjugation. ACS Synth Biol. 2014;3:929–931
-
(2014)
ACS Synth Biol
, vol.3
, pp. 929-931
-
-
Ji, W.1
Lee, D.2
Wong, E.3
|