메뉴 건너뛰기




Volumn 27, Issue 12, 2015, Pages 3294-3308

Correction: Transcriptome-wide identification of RNA targets of arabidopsis SERINE/ARGININE-RICH45 uncovers the unexpected roles of this RNA binding protein in RNA processing (Plant Cell, (2015) 27, (3294–3308), 10.1105/tpc.15.00641);Transcriptome-wide identification of RNA targets of arabidopsis SERINE/ARGININE-RICH45 uncovers the unexpected roles of this RNA binding protein in RNA processingopen

Author keywords

[No Author keywords available]

Indexed keywords

ABSCISIC ACID; ARABIDOPSIS PROTEIN; ARGININE; MESSENGER RNA; PHYTOHORMONE; PLANT RNA; RNA BINDING PROTEIN; SERINE; SR45 PROTEIN, ARABIDOPSIS; TRANSCRIPTOME;

EID: 84954447763     PISSN: 10404651     EISSN: 1532298X     Source Type: Journal    
DOI: 10.1105/tpc.17.00718     Document Type: Erratum
Times cited : (90)

References (82)
  • 1
    • 17644403212 scopus 로고    scopus 로고
    • Two P-type ATPases are required for copper delivery in Arabidopsis thaliana chloroplasts
    • Abdel-Ghany, S.E., Müller-Moulé, P., Niyogi, K.K., Pilon, M., and Shikanai, T. (2005). Two P-type ATPases are required for copper delivery in Arabidopsis thaliana chloroplasts. Plant Cell 17: 1233–1251.
    • (2005) Plant Cell , vol.17 , pp. 1233-1251
    • Abdel-Ghany, S.E.1    Müller-Moulé, P.2    Niyogi, K.K.3    Pilon, M.4    Shikanai, T.5
  • 2
    • 0346687520 scopus 로고    scopus 로고
    • Nuclear localization and in vivo dynamics of a plant-specific serine/arginine-rich protein
    • Ali, G.S., Golovkin, M., and Reddy, A.S. (2003). Nuclear localization and in vivo dynamics of a plant-specific serine/arginine-rich protein. Plant J. 36: 883–893.
    • (2003) Plant J , vol.36 , pp. 883-893
    • Ali, G.S.1    Golovkin, M.2    Reddy, A.S.3
  • 4
    • 44849123865 scopus 로고    scopus 로고
    • Analyses of in vivo interaction and mobility of two spliceosomal proteins using FRAP and BiFC
    • Ali, G.S., Prasad, K.V., Hanumappa, M., and Reddy, A.S. (2008). Analyses of in vivo interaction and mobility of two spliceosomal proteins using FRAP and BiFC. PLoS One 3: e1953.
    • (2008) Plos One , vol.3
    • Ali, G.S.1    Prasad, K.V.2    Hanumappa, M.3    Reddy, A.S.4
  • 6
    • 84863038938 scopus 로고    scopus 로고
    • The splicing factor SR45 affects the RNA-directed DNA methylation pathway in Arabidopsis
    • Ausin, I., Greenberg, M.V., Li, C.F., and Jacobsen, S.E. (2012). The splicing factor SR45 affects the RNA-directed DNA methylation pathway in Arabidopsis. Epigenetics 7: 29–33.
    • (2012) Epigenetics , vol.7 , pp. 29-33
    • Ausin, I.1    Greenberg, M.V.2    Li, C.F.3    Jacobsen, S.E.4
  • 7
    • 0029417114 scopus 로고
    • Identification and characterisation of a novel human RNA-binding protein
    • Badolato, J., Gardiner, E., Morrison, N., and Eisman, J. (1995). Identification and characterisation of a novel human RNA-binding protein. Gene 166: 323–327.
    • (1995) Gene , vol.166 , pp. 323-327
    • Badolato, J.1    Gardiner, E.2    Morrison, N.3    Eisman, J.4
  • 9
    • 59649124310 scopus 로고    scopus 로고
    • Nonsense-mediated mRNA decay (NMD) mechanisms
    • Brogna, S., and Wen, J. (2009). Nonsense-mediated mRNA decay (NMD) mechanisms. Nat. Struct. Mol. Biol. 16: 107–113.
    • (2009) Nat. Struct. Mol. Biol , vol.16 , pp. 107-113
    • Brogna, S.1    Wen, J.2
  • 10
    • 84856569717 scopus 로고    scopus 로고
    • A single ancient origin for prototypical serine/arginine-rich splicing factors
    • Califice, S., Baurain, D., Hanikenne, M., and Motte, P. (2012). A single ancient origin for prototypical serine/arginine-rich splicing factors. Plant Physiol. 158: 546–560.
    • (2012) Plant Physiol , vol.158 , pp. 546-560
    • Califice, S.1    Baurain, D.2    Hanikenne, M.3    Motte, P.4
  • 11
  • 12
    • 77957725138 scopus 로고    scopus 로고
    • The plant-specific SR45 protein negatively regulates glucose and ABA signaling during early seedling development in Arabidopsis
    • Carvalho, R.F., Carvalho, S.D., and Duque, P. (2010). The plant-specific SR45 protein negatively regulates glucose and ABA signaling during early seedling development in Arabidopsis. Plant Physiol. 154: 772–783.
    • (2010) Plant Physiol , vol.154 , pp. 772-783
    • Carvalho, R.F.1    Carvalho, S.D.2    Duque, P.3
  • 14
    • 84866100243 scopus 로고    scopus 로고
    • Interactions of SR45, an SR-like protein, with spliceosomal proteins and an intronic sequence: Insights into regulated splicing
    • Day, I.S., Golovkin, M., Palusa, S.G., Link, A., Ali, G.S., Thomas, J., Richardson, D.N., and Reddy, A.S. (2012). Interactions of SR45, an SR-like protein, with spliceosomal proteins and an intronic sequence: insights into regulated splicing. Plant J. 71: 936–947.
    • (2012) Plant J , vol.71 , pp. 936-947
    • Day, I.S.1    Golovkin, M.2    Palusa, S.G.3    Link, A.4    Ali, G.S.5    Thomas, J.6    Richardson, D.N.7    Reddy, A.S.8
  • 15
    • 77954299992 scopus 로고    scopus 로고
    • AgriGO: A GO analysis toolkit for the agricultural community
    • Du, Z., Zhou, X., Ling, Y., Zhang, Z., and Su, Z. (2010). agriGO: a GO analysis toolkit for the agricultural community. Nucleic Acids Res. 38: W64–W70.
    • (2010) Nucleic Acids Res , vol.38 , pp. W64-W70
    • Du, Z.1    Zhou, X.2    Ling, Y.3    Zhang, Z.4    Su, Z.5
  • 16
    • 0037047644 scopus 로고    scopus 로고
    • Predictive identification of exonic splicing enhancers in human genes
    • Fairbrother, W.G., Yeh, R.F., Sharp, P.A., and Burge, C.B. (2002). Predictive identification of exonic splicing enhancers in human genes. Science 297: 1007–1013.
    • (2002) Science , vol.297 , pp. 1007-1013
    • Fairbrother, W.G.1    Yeh, R.F.2    Sharp, P.A.3    Burge, C.B.4
  • 19
    • 0037175374 scopus 로고    scopus 로고
    • REF1/Aly and the additional exon junction complex proteins are dispensable for nuclear mRNA export
    • Gatfield, D., and Izaurralde, E. (2002). REF1/Aly and the additional exon junction complex proteins are dispensable for nuclear mRNA export. J. Cell Biol. 159: 579–588.
    • (2002) J. Cell Biol , vol.159 , pp. 579-588
    • Gatfield, D.1    Izaurralde, E.2
  • 20
    • 0042025014 scopus 로고    scopus 로고
    • Nonsense-mediated mRNA decay in Drosophila: At the intersection of the yeast and mammalian pathways
    • Gatfield, D., Unterholzner, L., Ciccarelli, F.D., Bork, P., and Izaurralde, E. (2003). Nonsense-mediated mRNA decay in Drosophila: at the intersection of the yeast and mammalian pathways. EMBO J. 22: 3960–3970.
    • (2003) EMBO J , vol.22 , pp. 3960-3970
    • Gatfield, D.1    Unterholzner, L.2    Ciccarelli, F.D.3    Bork, P.4    Izaurralde, E.5
  • 21
    • 39849085276 scopus 로고    scopus 로고
    • RNA immunoprecipitation for determining RNA-protein associations in vivo
    • F.M. Ausubel, R. Brent, R.E. Kingston, D.D. Moore, J.G. Seidman, J.A. Smith, and K. Struhl, eds (New York: Wiley)
    • Gilbert, C., and Svejstrup, J.Q. (2006). RNA immunoprecipitation for determining RNA-protein associations in vivo. In Current Protocols in Molecular Biology, F.M. Ausubel, R. Brent, R.E. Kingston, D.D. Moore, J.G. Seidman, J.A. Smith, and K. Struhl, eds (New York: Wiley), pp. 27.4.1–27.4.11.
    • (2006) Current Protocols in Molecular Biology , pp. 1-27
    • Gilbert, C.1    Svejstrup, J.Q.2
  • 22
    • 0033579436 scopus 로고    scopus 로고
    • An SC35-like protein and a novel serine/arginine-rich protein interact with Arabidopsis U1-70K protein
    • Golovkin, M., and Reddy, A.S. (1999). An SC35-like protein and a novel serine/arginine-rich protein interact with Arabidopsis U1-70K protein. J. Biol. Chem. 274: 36428–36438.
    • (1999) J. Biol. Chem , vol.274 , pp. 36428-36438
    • Golovkin, M.1    Reddy, A.S.2
  • 23
    • 0035452417 scopus 로고    scopus 로고
    • Binding of a SART3 tumor-rejection antigen to a pre-mRNA splicing factor RNPS1: A possible regulation of splicing by a complex formation
    • Harada, K., Yamada, A., Yang, D., Itoh, K., and Shichijo, S. (2001). Binding of a SART3 tumor-rejection antigen to a pre-mRNA splicing factor RNPS1: a possible regulation of splicing by a complex formation. Int. J. Cancer 93: 623–628.
    • (2001) Int. J. Cancer , vol.93 , pp. 623-628
    • Harada, K.1    Yamada, A.2    Yang, D.3    Itoh, K.4    Shichijo, S.5
  • 24
    • 79955651864 scopus 로고    scopus 로고
    • Evolution of abscisic acid synthesis and signaling mechanisms
    • Hauser, F., Waadt, R., and Schroeder, J.I. (2011). Evolution of abscisic acid synthesis and signaling mechanisms. Curr. Biol. 21: R346–R355.
    • (2011) Curr. Biol , vol.21 , pp. R346-R355
    • Hauser, F.1    Waadt, R.2    Schroeder, J.I.3
  • 25
    • 84860513145 scopus 로고    scopus 로고
    • The spliceosome: A flexible, reversible macromolecular machine
    • Hoskins, A.A., and Moore, M.J. (2012). The spliceosome: a flexible, reversible macromolecular machine. Trends Biochem. Sci. 37: 179–188.
    • (2012) Trends Biochem. Sci , vol.37 , pp. 179-188
    • Hoskins, A.A.1    Moore, M.J.2
  • 26
    • 84864441889 scopus 로고    scopus 로고
    • A plasma membrane receptor kinase, GHR1, mediates abscisic acid- and hydrogen peroxide-regulated stomatal movement in Arabidopsis
    • Hua, D., Wang, C., He, J., Liao, H., Duan, Y., Zhu, Z., Guo, Y., Chen, Z., and Gong, Z. (2012). A plasma membrane receptor kinase, GHR1, mediates abscisic acid- and hydrogen peroxide-regulated stomatal movement in Arabidopsis. Plant Cell 24: 2546–2561.
    • (2012) Plant Cell , vol.24 , pp. 2546-2561
    • Hua, D.1    Wang, C.2    He, J.3    Liao, H.4    Duan, Y.5    Zhu, Z.6    Guo, Y.7    Chen, Z.8    Gong, Z.9
  • 27
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
    • Huang, W., Sherman, B.T., and Lempicki, R.A. (2009). Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protoc. 4: 44–57.
    • (2009) Nat. Protoc , vol.4 , pp. 44-57
    • Huang, W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 28
    • 0042671357 scopus 로고    scopus 로고
    • Pre-mRNA splicing: Awash in a sea of proteins
    • Jurica, M.S., and Moore, M.J. (2003). Pre-mRNA splicing: awash in a sea of proteins. Mol. Cell 12: 5–14.
    • (2003) Mol. Cell , vol.12 , pp. 5-14
    • Jurica, M.S.1    Moore, M.J.2
  • 29
    • 80053027909 scopus 로고    scopus 로고
    • Functional consequences of developmentally regulated alternative splicing
    • Kalsotra, A., and Cooper, T.A. (2011). Functional consequences of developmentally regulated alternative splicing. Nat. Rev. Genet. 12: 715–729.
    • (2011) Nat. Rev. Genet , vol.12 , pp. 715-729
    • Kalsotra, A.1    Cooper, T.A.2
  • 30
    • 25844502003 scopus 로고    scopus 로고
    • The mammalian RNA polymerase II C-terminal domain interacts with RNA to suppress transcriptioncoupled 39 end formation
    • Kaneko, S., and Manley, J.L. (2005). The mammalian RNA polymerase II C-terminal domain interacts with RNA to suppress transcriptioncoupled 39 end formation. Mol. Cell 20: 91–103.
    • (2005) Mol. Cell , vol.20 , pp. 91-103
    • Kaneko, S.1    Manley, J.L.2
  • 31
    • 1342325392 scopus 로고    scopus 로고
    • A simple whole cell lysate system for in vitro splicing reveals a stepwise assembly of the exonexon junction complex
    • Kataoka, N., and Dreyfuss, G. (2004). A simple whole cell lysate system for in vitro splicing reveals a stepwise assembly of the exonexon junction complex. J. Biol. Chem. 279: 7009–7013.
    • (2004) J. Biol. Chem , vol.279 , pp. 7009-7013
    • Kataoka, N.1    Dreyfuss, G.2
  • 32
    • 84873807144 scopus 로고    scopus 로고
    • Genome-wide pathway analysis reveals different signaling pathways between secreted lactoferrin and intracellular delta-lactoferrin
    • Kim, B., Kang, S., and Kim, S.J. (2013). Genome-wide pathway analysis reveals different signaling pathways between secreted lactoferrin and intracellular delta-lactoferrin. PLoS One 8: e55338.
    • (2013) Plos One , vol.8
    • Kim, B.1    Kang, S.2    Kim, S.J.3
  • 33
    • 69949191661 scopus 로고    scopus 로고
    • Aberrant mRNA transcripts and the nonsense-mediated decay proteins UPF2 and UPF3 are enriched in the Arabidopsis nucleolus
    • Kim, S.H., Koroleva, O.A., Lewandowska, D., Pendle, A.F., Clark, G.P., Simpson, C.G., Shaw, P.J., and Brown, J.W. (2009). Aberrant mRNA transcripts and the nonsense-mediated decay proteins UPF2 and UPF3 are enriched in the Arabidopsis nucleolus. Plant Cell 21: 2045–2057.
    • (2009) Plant Cell , vol.21 , pp. 2045-2057
    • Kim, S.H.1    Koroleva, O.A.2    Lewandowska, D.3    Pendle, A.F.4    Clark, G.P.5    Simpson, C.G.6    Shaw, P.J.7    Brown, J.W.8
  • 34
    • 77958087841 scopus 로고    scopus 로고
    • Novel cis-active structures in the coding region mediate CRM1-dependent nuclear export of IFN-a 1 mRNA
    • Kimura, T., Hashimoto, I., Nishizawa, M., Ito, S., and Yamada, H. (2010). Novel cis-active structures in the coding region mediate CRM1-dependent nuclear export of IFN-a 1 mRNA. Med. Mol. Morphol. 43: 145–157.
    • (2010) Med. Mol. Morphol , vol.43 , pp. 145-157
    • Kimura, T.1    Hashimoto, I.2    Nishizawa, M.3    Ito, S.4    Yamada, H.5
  • 35
    • 67651122830 scopus 로고    scopus 로고
    • Dynamic behavior of Arabidopsis eIF4A-III, putative core protein of exon junction complex: Fast relocation to nucleolus and splicing speckles under hypoxia
    • Koroleva, O.A., Calder, G., Pendle, A.F., Kim, S.H., Lewandowska, D., Simpson, C.G., Jones, I.M., Brown, J.W., and Shaw, P.J. (2009). Dynamic behavior of Arabidopsis eIF4A-III, putative core protein of exon junction complex: fast relocation to nucleolus and splicing speckles under hypoxia. Plant Cell 21: 1592–1606.
    • (2009) Plant Cell , vol.21 , pp. 1592-1606
    • Koroleva, O.A.1    Calder, G.2    Pendle, A.F.3    Kim, S.H.4    Lewandowska, D.5    Simpson, C.G.6    Jones, I.M.7    Brown, J.W.8    Shaw, P.J.9
  • 36
    • 51149123108 scopus 로고    scopus 로고
    • MRNA cap binding proteins: Effects on abscisic acid signal transduction, mRNA processing, and microarray analyses
    • Kuhn, J.M., Hugouvieux, V., and Schroeder, J.I. (2008). mRNA cap binding proteins: effects on abscisic acid signal transduction, mRNA processing, and microarray analyses. Curr. Top. Microbiol. Immunol. 326: 139–150.
    • (2008) Curr. Top. Microbiol. Immunol , vol.326 , pp. 139-150
    • Kuhn, J.M.1    Hugouvieux, V.2    Schroeder, J.I.3
  • 37
    • 84876247905 scopus 로고    scopus 로고
    • Transcriptome profiling of the murine testis during the first wave of spermatogenesis
    • Laiho, A., Kotaja, N., Gyenesei, A., and Sironen, A. (2013). Transcriptome profiling of the murine testis during the first wave of spermatogenesis. PLoS One 8: e61558.
    • (2013) Plos One , vol.8
    • Laiho, A.1    Kotaja, N.2    Gyenesei, A.3    Sironen, A.4
  • 38
    • 1542285163 scopus 로고    scopus 로고
    • A concerted DNA methylation/histone methylation switch regulates rRNA gene dosage control and nucleolar dominance
    • Lawrence, R.J., Earley, K., Pontes, O., Silva, M., Chen, Z.J., Neves, N., Viegas, W., and Pikaard, C.S. (2004). A concerted DNA methylation/histone methylation switch regulates rRNA gene dosage control and nucleolar dominance. Mol. Cell 13: 599–609.
    • (2004) Mol. Cell , vol.13 , pp. 599-609
    • Lawrence, R.J.1    Earley, K.2    Pontes, O.3    Silva, M.4    Chen, Z.J.5    Neves, N.6    Viegas, W.7    Pikaard, C.S.8
  • 39
    • 0035801373 scopus 로고    scopus 로고
    • The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay
    • Le Hir, H., Gatfield, D., Izaurralde, E., and Moore, M.J. (2001). The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay. EMBO J. 20: 4987–4997.
    • (2001) EMBO J , vol.20 , pp. 4987-4997
    • Le Hir, H.1    Gatfield, D.2    Izaurralde, E.3    Moore, M.J.4
  • 40
    • 0034672093 scopus 로고    scopus 로고
    • The spliceosome deposits multiple proteins 20-24 nucleotides upstream of mRNA exon-exon junctions
    • Le Hir, H., Izaurralde, E., Maquat, L.E., and Moore, M.J. (2000). The spliceosome deposits multiple proteins 20-24 nucleotides upstream of mRNA exon-exon junctions. EMBO J. 19: 6860–6869.
    • (2000) EMBO J , vol.19 , pp. 6860-6869
    • Le Hir, H.1    Izaurralde, E.2    Maquat, L.E.3    Moore, M.J.4
  • 41
    • 83255185041 scopus 로고    scopus 로고
    • ABA signal transduction at the crossroad of biotic and abiotic stress responses
    • Lee, S.C., and Luan, S. (2012). ABA signal transduction at the crossroad of biotic and abiotic stress responses. Plant Cell Environ. 35: 53–60.
    • (2012) Plant Cell Environ , vol.35 , pp. 53-60
    • Lee, S.C.1    Luan, S.2
  • 42
    • 0141752774 scopus 로고    scopus 로고
    • Nuclear Pnn/DRS protein binds to spliced mRNPs and participates in mRNA processing and export via interaction with RNPS1.Mol
    • Li, C., Lin, R.I., Lai, M.C., Ouyang, P., and Tarn, W.Y. (2003). Nuclear Pnn/DRS protein binds to spliced mRNPs and participates in mRNA processing and export via interaction with RNPS1.Mol. Cell. Biol. 23: 7363–7376.
    • (2003) Cell. Biol , vol.23 , pp. 7363-7376
    • Li, C.1    Lin, R.I.2    Lai, M.C.3    Ouyang, P.4    Tarn, W.Y.5
  • 43
    • 36249028129 scopus 로고    scopus 로고
    • The RNA binding protein RNPS1 alleviates ASF/SF2 depletion-induced genomic instability
    • Li, X., Niu, T., and Manley, J.L. (2007). The RNA binding protein RNPS1 alleviates ASF/SF2 depletion-induced genomic instability. RNA 13: 2108–2115.
    • (2007) RNA , vol.13 , pp. 2108-2115
    • Li, X.1    Niu, T.2    Manley, J.L.3
  • 44
    • 58249093940 scopus 로고    scopus 로고
    • The SR protein family of splicing factors: Master regulators of gene expression
    • Long, J.C., and Caceres, J.F. (2009). The SR protein family of splicing factors: master regulators of gene expression. Biochem. J. 417: 15–27.
    • (2009) Biochem. J. , vol.417 , pp. 15-27
    • Long, J.C.1    Caceres, J.F.2
  • 45
    • 0035823247 scopus 로고    scopus 로고
    • Communication of the position of exon-exon junctions to the mRNA surveillance machinery by the protein RNPS1
    • Lykke-Andersen, J., Shu, M.D., and Steitz, J.A. (2001). Communication of the position of exon-exon junctions to the mRNA surveillance machinery by the protein RNPS1. Science 293: 1836–1839.
    • (2001) Science , vol.293 , pp. 1836-1839
    • Lykke-Andersen, J.1    Shu, M.D.2    Steitz, J.A.3
  • 46
    • 0033575702 scopus 로고    scopus 로고
    • Purification and characterization of human RNPS1: A general activator of pre-mRNA splicing
    • Mayeda, A., Badolato, J., Kobayashi, R., Zhang, M.Q., Gardiner, E.M., and Krainer, A.R. (1999). Purification and characterization of human RNPS1: a general activator of pre-mRNA splicing. EMBO J. 18: 4560–4570.
    • (1999) EMBO J , vol.18 , pp. 4560-4570
    • Mayeda, A.1    Badolato, J.2    Kobayashi, R.3    Zhang, M.Q.4    Gardiner, E.M.5    Krainer, A.R.6
  • 47
    • 0242497966 scopus 로고    scopus 로고
    • An evolutionarily conserved role for SRm160 in 39-end processing that functions independently of exon junction complex formation
    • McCracken, S., Longman, D., Johnstone, I.L., Cáceres, J.F., and Blencowe, B.J. (2003). An evolutionarily conserved role for SRm160 in 39-end processing that functions independently of exon junction complex formation. J. Biol. Chem. 278: 44153–44160.
    • (2003) J. Biol. Chem , vol.278 , pp. 44153-44160
    • McCracken, S.1    Longman, D.2    Johnstone, I.L.3    Cáceres, J.F.4    Blencowe, B.J.5
  • 48
    • 84857184337 scopus 로고    scopus 로고
    • Proteins associated with the exon junction complex also control the alternative splicing of apoptotic regulators
    • Michelle, L., et al. (2012). Proteins associated with the exon junction complex also control the alternative splicing of apoptotic regulators. Mol. Cell. Biol. 32: 954–967.
    • (2012) Mol. Cell. Biol , vol.32 , pp. 954-967
    • Michelle, L.1
  • 49
    • 7044272280 scopus 로고    scopus 로고
    • Evidence for reassociation of RNAbinding proteins after cell lysis: Implications for the interpretation of immunoprecipitation analyses
    • Mili, S., and Steitz, J.A. (2004). Evidence for reassociation of RNAbinding proteins after cell lysis: implications for the interpretation of immunoprecipitation analyses. RNA 10: 1692–1694.
    • (2004) RNA , vol.10 , pp. 1692-1694
    • Mili, S.1    Steitz, J.A.2
  • 51
    • 0031984931 scopus 로고    scopus 로고
    • Specific binding of an exonic splicing enhancer by the pre-mRNA splicing factor SRp55
    • Nagel, R.J., Lancaster, A.M., and Zahler, A.M. (1998). Specific binding of an exonic splicing enhancer by the pre-mRNA splicing factor SRp55. RNA 4: 11–23.
    • (1998) RNA , vol.4 , pp. 11-23
    • Nagel, R.J.1    Lancaster, A.M.2    Zahler, A.M.3
  • 52
    • 33746777825 scopus 로고    scopus 로고
    • Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses
    • Nemhauser, J.L., Hong, F., and Chory, J. (2006). Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses. Cell 126: 467–475.
    • (2006) Cell , vol.126 , pp. 467-475
    • Nemhauser, J.L.1    Hong, F.2    Chory, J.3
  • 53
    • 0346732307 scopus 로고    scopus 로고
    • Influence of polymerase II processivity on alternative splicing depends on splice site strength
    • Nogués, G., Muñoz, M.J., and Kornblihtt, A.R. (2003). Influence of polymerase II processivity on alternative splicing depends on splice site strength. J. Biol. Chem. 278: 52166–52171.
    • (2003) J. Biol. Chem , vol.278 , pp. 52166-52171
    • Nogués, G.1    Muñoz, M.J.2    Kornblihtt, A.R.3
  • 54
    • 0942268832 scopus 로고    scopus 로고
    • Splicing enhances translation in mammalian cells: An additional function of the exon junction complex
    • Nott, A., Le Hir, H., and Moore, M.J. (2004). Splicing enhances translation in mammalian cells: an additional function of the exon junction complex. Genes Dev. 18: 210–222.
    • (2004) Genes Dev , vol.18 , pp. 210-222
    • Nott, A.1    Le Hir, H.2    Moore, M.J.3
  • 55
    • 33847343883 scopus 로고    scopus 로고
    • Alternative splicing of pre-mRNAs of Arabidopsis serine/arginine-rich proteins: Regulation by hormones and stresses
    • Palusa, S.G., Ali, G.S., and Reddy, A.S. (2007). Alternative splicing of pre-mRNAs of Arabidopsis serine/arginine-rich proteins: regulation by hormones and stresses. Plant J. 49: 1091–1107.
    • (2007) Plant J , vol.49 , pp. 1091-1107
    • Palusa, S.G.1    Ali, G.S.2    Reddy, A.S.3
  • 56
    • 34249987613 scopus 로고    scopus 로고
    • A computational survey of candidate exonic splicing enhancer motifs in the model plant Arabidopsis thaliana
    • Pertea, M., Mount, S.M., and Salzberg, S.L. (2007). A computational survey of candidate exonic splicing enhancer motifs in the model plant Arabidopsis thaliana. BMC Bioinformatics 8: 159.
    • (2007) BMC Bioinformatics , vol.8
    • Pertea, M.1    Mount, S.M.2    Salzberg, S.L.3
  • 57
    • 84888617099 scopus 로고    scopus 로고
    • Organizing principles of mammalian nonsense-mediated mRNA decay
    • Popp, M.W., and Maquat, L.E. (2013). Organizing principles of mammalian nonsense-mediated mRNA decay. Annu. Rev. Genet. 47: 139–165.
    • (2013) Annu. Rev. Genet , vol.47 , pp. 139-165
    • Popp, M.W.1    Maquat, L.E.2
  • 58
    • 84857714524 scopus 로고    scopus 로고
    • Plant serine/arginine-rich proteins: Roles in precursor messenger RNA splicing, plant development, and stress responses. Wiley Interdiscip
    • Reddy, A.S., and Shad Ali, G. (2011). Plant serine/arginine-rich proteins: roles in precursor messenger RNA splicing, plant development, and stress responses. Wiley Interdiscip. Rev. RNA 2: 875–889.
    • (2011) Rev. RNA , vol.2 , pp. 875-889
    • Reddy, A.S.1    Shad Ali, G.2
  • 59
    • 84888422652 scopus 로고    scopus 로고
    • Complexity of the alternative splicing landscape in plants
    • Reddy, A.S.N., Marquez, Y., Kalyna, M., and Barta, A. (2013). Complexity of the alternative splicing landscape in plants. Plant Cell 25: 3657–3683.
    • (2013) Plant Cell , vol.25 , pp. 3657-3683
    • Reddy, A.S.N.1    Marquez, Y.2    Kalyna, M.3    Barta, A.4
  • 60
    • 0036826885 scopus 로고    scopus 로고
    • 59 Exon interactions within the human spliceosome establish a framework for exon junction complex structure and assembly
    • Reichert, V.L., Le Hir, H., Jurica, M.S., and Moore, M.J. (2002). 59 Exon interactions within the human spliceosome establish a framework for exon junction complex structure and assembly. Genes Dev. 16: 2778–2791.
    • (2002) Genes Dev , vol.16 , pp. 2778-2791
    • Reichert, V.L.1    Le Hir, H.2    Jurica, M.S.3    Moore, M.J.4
  • 61
    • 33746909895 scopus 로고    scopus 로고
    • A hypermorphic mutation in the protein phosphatase 2C HAB1 strongly affects ABA signaling in Arabidopsis
    • Robert, N., Merlot, S., N’guyen, V., Boisson-Dernier, A., and Schroeder, J.I. (2006). A hypermorphic mutation in the protein phosphatase 2C HAB1 strongly affects ABA signaling in Arabidopsis. FEBS Lett. 580: 4691–4696.
    • (2006) FEBS Lett , vol.580 , pp. 4691-4696
    • Robert, N.1    Merlot, S.2    N’Guyen, V.3    Boisson-Dernier, A.4    Schroeder, J.I.5
  • 62
    • 77957792654 scopus 로고    scopus 로고
    • Exon junction complex subunits are required to splice Drosophila MAP kinase, a large heterochromatic gene
    • Roignant, J.Y., and Treisman, J.E. (2010). Exon junction complex subunits are required to splice Drosophila MAP kinase, a large heterochromatic gene. Cell 143: 238–250.
    • (2010) Cell , vol.143 , pp. 238-250
    • Roignant, J.Y.1    Treisman, J.E.2
  • 63
    • 1642540255 scopus 로고    scopus 로고
    • Human RNPS1 and its associated factors: A versatile alternative pre-mRNA splicing regulator in vivo.
    • Sakashita, E., Tatsumi, S., Werner, D., Endo, H., and Mayeda, A. (2004). Human RNPS1 and its associated factors: a versatile alternative pre-mRNA splicing regulator in vivo. Mol. Cell. Biol. 24: 1174–1187.
    • (2004) Mol. Cell. Biol , vol.24 , pp. 1174-1187
    • Sakashita, E.1    Tatsumi, S.2    Werner, D.3    Endo, H.4    Mayeda, A.5
  • 64
    • 84874431413 scopus 로고    scopus 로고
    • Genomic era analyses of RNA secondary structure and RNA-binding proteins reveal their significance to post-transcriptional regulation in plants
    • Silverman, I.M., Li, F., and Gregory, B.D. (2013). Genomic era analyses of RNA secondary structure and RNA-binding proteins reveal their significance to post-transcriptional regulation in plants. Plant Sci. 205-206: 55–62.
    • (2013) Plant Sci , vol.205 , Issue.206 , pp. 55-62
    • Silverman, I.M.1    Li, F.2    Gregory, B.D.3
  • 65
    • 84869090905 scopus 로고    scopus 로고
    • The cellular EJC interactome reveals higher-order mRNP structure and an EJC-SR protein nexus
    • Singh, G., Kucukural, A., Cenik, C., Leszyk, J.D., Shaffer, S.A., Weng, Z., and Moore, M.J. (2012). The cellular EJC interactome reveals higher-order mRNP structure and an EJC-SR protein nexus. Cell 151: 750–764.
    • (2012) Cell , vol.151 , pp. 750-764
    • Singh, G.1    Kucukural, A.2    Cenik, C.3    Leszyk, J.D.4    Shaffer, S.A.5    Weng, Z.6    Moore, M.J.7
  • 66
    • 84888396486 scopus 로고    scopus 로고
    • Alternative splicing at the intersection of biological timing, development, and stress responses
    • Staiger, D., and Brown, J.W. (2013). Alternative splicing at the intersection of biological timing, development, and stress responses. Plant Cell 25: 3640–3656.
    • (2013) Plant Cell , vol.25 , pp. 3640-3656
    • Staiger, D.1    Brown, J.W.2
  • 67
    • 0032478506 scopus 로고    scopus 로고
    • Human Tra2 proteins are sequence-specific activators of pre-mRNA splicing
    • Tacke, R., Tohyama, M., Ogawa, S., and Manley, J.L. (1998). Human Tra2 proteins are sequence-specific activators of pre-mRNA splicing. Cell 93: 139–148.
    • (1998) Cell , vol.93 , pp. 139-148
    • Tacke, R.1    Tohyama, M.2    Ogawa, S.3    Manley, J.L.4
  • 68
    • 2342540912 scopus 로고    scopus 로고
    • The ever-increasing complexities of the exon junction complex
    • Tange, T.O., Nott, A., and Moore, M.J. (2004). The ever-increasing complexities of the exon junction complex. Curr. Opin. Cell Biol. 16: 279–284.
    • (2004) Curr. Opin. Cell Biol , vol.16 , pp. 279-284
    • Tange, T.O.1    Nott, A.2    Moore, M.J.3
  • 69
    • 84871998837 scopus 로고    scopus 로고
    • Identification of an intronic splicing regulatory element involved in autoregulation of alternative splicing of SCL33 pre-mRNA
    • Thomas, J., Palusa, S.G., Prasad, K.V., Ali, G.S., Surabhi, G.K., Ben-Hur, A., Abdel-Ghany, S.E., and Reddy, A.S. (2012). Identification of an intronic splicing regulatory element involved in autoregulation of alternative splicing of SCL33 pre-mRNA. Plant J. 72: 935–946.
    • (2012) Plant J , vol.72 , pp. 935-946
    • Thomas, J.1    Palusa, S.G.2    Prasad, K.V.3    Ali, G.S.4    Surabhi, G.K.5    Ben-Hur, A.6    Abdel-Ghany, S.E.7    Reddy, A.S.8
  • 72
    • 33644924397 scopus 로고    scopus 로고
    • Methods and concepts in quantifying resistance to drought, salt and freezing, abiotic stresses that affect plant water status
    • Verslues, P.E., Agarwal, M., Katiyar-Agarwal, S., Zhu, J., and Zhu, J.K. (2006). Methods and concepts in quantifying resistance to drought, salt and freezing, abiotic stresses that affect plant water status. Plant J. 45: 523–539.
    • (2006) Plant J , vol.45 , pp. 523-539
    • Verslues, P.E.1    Agarwal, M.2    Katiyar-Agarwal, S.3    Zhu, J.4    Zhu, J.K.5
  • 73
    • 0033922756 scopus 로고    scopus 로고
    • The kinesin-like calmodulin binding protein is differentially involved in cell division
    • Vos, J.W., Safadi, F., Reddy, A.S., and Hepler, P.K. (2000). The kinesin-like calmodulin binding protein is differentially involved in cell division. Plant Cell 12: 979–990.
    • (2000) Plant Cell , vol.12 , pp. 979-990
    • Vos, J.W.1    Safadi, F.2    Reddy, A.S.3    Hepler, P.K.4
  • 74
    • 84867026807 scopus 로고    scopus 로고
    • SKIP is a component of the spliceosome linking alternative splicing and the circadian clock in Arabidopsis
    • Wang, X., et al. (2012). SKIP is a component of the spliceosome linking alternative splicing and the circadian clock in Arabidopsis. Plant Cell 24: 3278–3295.
    • (2012) Plant Cell , vol.24 , pp. 3278-3295
    • Wang, X.1
  • 76
    • 0141706348 scopus 로고    scopus 로고
    • Exon junction complexes mediate the enhancing effect of splicing on mRNA expression
    • Wiegand, H.L., Lu, S., and Cullen, B.R. (2003). Exon junction complexes mediate the enhancing effect of splicing on mRNA expression. Proc. Natl. Acad. Sci. USA 100: 11327–11332.
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 11327-11332
    • Wiegand, H.L.1    Lu, S.2    Cullen, B.R.3
  • 77
    • 84893707191 scopus 로고    scopus 로고
    • Genome-wide analysis of light-regulated alternative splicing mediated by photoreceptors in Physcomitrella patens
    • Wu, H.P., Su, Y.S., Chen, H.C., Chen, Y.R., Wu, C.C., Lin, W.D., and Tu, S.L. (2014). Genome-wide analysis of light-regulated alternative splicing mediated by photoreceptors in Physcomitrella patens. Genome Biol. 15: R10.
    • (2014) Genome Biol , vol.15
    • Wu, H.P.1    Su, Y.S.2    Chen, H.C.3    Chen, Y.R.4    Wu, C.C.5    Lin, W.D.6    Tu, S.L.7
  • 78
    • 0033576626 scopus 로고    scopus 로고
    • Functional recognition of the 39 splice site AG by the splicing factor U2AF35
    • Wu, S., Romfo, C.M., Nilsen, T.W., and Green, M.R. (1999). Functional recognition of the 39 splice site AG by the splicing factor U2AF35. Nature 402: 832–835.
    • (1999) Nature , vol.402 , pp. 832-835
    • Wu, S.1    Romfo, C.M.2    Nilsen, T.W.3    Green, M.R.4
  • 79
    • 0031870169 scopus 로고    scopus 로고
    • Intron function in the nonsense-mediated decay of beta-globin mRNA: Indications that pre-mRNA splicing in the nucleus can influence mRNA translation in the cytoplasm
    • Zhang, J., Sun, X., Qian, Y., and Maquat, L.E. (1998). Intron function in the nonsense-mediated decay of beta-globin mRNA: indications that pre-mRNA splicing in the nucleus can influence mRNA translation in the cytoplasm. RNA 4: 801–815.
    • (1998) RNA , vol.4 , pp. 801-815
    • Zhang, J.1    Sun, X.2    Qian, Y.3    Maquat, L.E.4
  • 80
    • 84902455432 scopus 로고    scopus 로고
    • Phosphothreonine 218 is required for the function of SR45.1 in regulating flower petal development in Arabidopsis
    • Zhang, X.N., Mo, C., Garrett, W.M., and Cooper, B. (2014). Phosphothreonine 218 is required for the function of SR45.1 in regulating flower petal development in Arabidopsis. Plant Signal. Behav. 9: e29134.
    • (2014) Plant Signal. Behav , vol.9
    • Zhang, X.N.1    Mo, C.2    Garrett, W.M.3    Cooper, B.4
  • 81
    • 67650189015 scopus 로고    scopus 로고
    • Two alternatively spliced isoforms of the Arabidopsis SR45 protein have distinct roles during normal plant development
    • Zhang, X.N., and Mount, S.M. (2009). Two alternatively spliced isoforms of the Arabidopsis SR45 protein have distinct roles during normal plant development. Plant Physiol. 150: 1450–1458.
    • (2009) Plant Physiol , vol.150 , pp. 1450-1458
    • Zhang, X.N.1    Mount, S.M.2
  • 82
    • 0033576591 scopus 로고    scopus 로고
    • Both subunits of U2AF recognize the 39 splice site in Caenorhabditis elegans
    • Zorio, D.A., and Blumenthal, T. (1999). Both subunits of U2AF recognize the 39 splice site in Caenorhabditis elegans. Nature 402: 835–83.
    • (1999) Nature , vol.402 , pp. 835-883
    • Zorio, D.A.1    Blumenthal, T.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.