-
1
-
-
0037841805
-
The deep roots of eukaryotes
-
Baldauf S. L. The deep roots of eukaryotes. Science. 300, 1703-1706 (2003
-
(2003)
Science
, vol.300
, pp. 1703-1706
-
-
Baldauf, S.L.1
-
3
-
-
0000851766
-
Toxoplasma hammondia besniotia sarcocystis, and other tissue cyst-forming coccidia of man and animals
-
ed. Kreier J. P. Academic Press
-
Dubey J. P. Toxoplasma, Hammondia, Besniotia, Sarcocystis, and other tissue cyst-forming coccidia of man and animals. in Parasitic Protozoa (ed. Kreier J. P.) 101-237 (Academic Press, 1977
-
(1977)
Parasitic Protozoa
, pp. 101-237
-
-
Dubey, J.P.1
-
4
-
-
33750618212
-
A molecular time-scale for eukaryote evolution recalibrated with the continuous microfossil record
-
Berney C., & Pawlowski J A molecular time-scale for eukaryote evolution recalibrated with the continuous microfossil record. Proc. Biol. Sci. 273, 1867-1872 (2006
-
(2006)
Proc. Biol. Sci
, vol.273
, pp. 1867-1872
-
-
Berney, C.1
Pawlowski, J.2
-
6
-
-
68049116940
-
Toxoplasmosis snapshots: Global status of toxoplasma gondii seroprevalence and implications for pregnancy and congenital toxoplasmosis
-
Pappas G., Roussos N., & Falagas M. E. Toxoplasmosis snapshots: global status of Toxoplasma gondii seroprevalence and implications for pregnancy and congenital toxoplasmosis. Int. J. Parasitol. 39, 1385-1394 (2009
-
(2009)
Int. J. Parasitol
, vol.39
, pp. 1385-1394
-
-
Pappas, G.1
Roussos, N.2
Falagas, M.E.3
-
9
-
-
0347091255
-
Recent expansion of toxoplasma through enhanced oral transmission
-
Su C., et al. Recent expansion of Toxoplasma through enhanced oral transmission. Science. 299, 414-416 (2003
-
(2003)
Science
, vol.299
, pp. 414-416
-
-
Su, C.1
-
10
-
-
53849092760
-
Population structure of toxoplasma gondii: Clonal expansion driven by infrequent recombination and selective sweeps
-
Sibley L. D., & Ajioka J. W. Population structure of Toxoplasma gondii: Clonal expansion driven by infrequent recombination and selective sweeps. Annu. Rev. Microbiol. 62, 329-351 (2008
-
(2008)
Annu. Rev. Microbiol
, vol.62
, pp. 329-351
-
-
Sibley, L.D.1
Ajioka, J.W.2
-
11
-
-
79954889434
-
Genetic analyses of atypical toxoplasma gondii strains reveals a fourth clonal lineage in North America
-
Khan A., et al. Genetic analyses of atypical Toxoplasma gondii strains reveals a fourth clonal lineage in North America. Int. J. Parasitol. 41, 645-655 (2011
-
(2011)
Int. J. Parasitol
, vol.41
, pp. 645-655
-
-
Khan, A.1
-
12
-
-
84867751254
-
Modulation of innate immunity by toxoplasma gondii virulence effectors
-
Hunter C. A., & Sibley L. D. Modulation of innate immunity by Toxoplasma gondii virulence effectors. Nat. Rev. Microbiol. 10, 766-778 (2012
-
(2012)
Nat. Rev. Microbiol
, vol.10
, pp. 766-778
-
-
Hunter, C.A.1
Sibley, L.D.2
-
13
-
-
84876941716
-
Hammondia hammondi, an avirulent relative of toxoplasma gondii, has functional orthologs of known t gondii virulence genes
-
Walzer K. A., et al. Hammondia hammondi, an avirulent relative of Toxoplasma gondii, has functional orthologs of known T. gondii virulence genes. Proc. Natl Acad. Sci. USA. 110, 7446-7451 (2013
-
(2013)
Proc. Natl Acad. Sci. USA
, vol.110
, pp. 7446-7451
-
-
Walzer, K.A.1
-
14
-
-
84924106975
-
Systems based analysis of the sarcocystis neurona genome identifies pathways that contribute to a heteroxenous life cycle
-
Blazejewski T., et al. Systems based analysis of the Sarcocystis neurona genome identifies pathways that contribute to a heteroxenous life cycle. MBio 6. 02445-14 (2015
-
(2015)
MBio
, vol.6
, pp. 02445-02514
-
-
Blazejewski, T.1
-
15
-
-
84861207409
-
Comparative genomics of the apicomplexan parasites toxoplasma gondii and neospora caninum: Coccidia differing in host range and transmission strategy
-
Reid A. J., et al. Comparative genomics of the apicomplexan parasites Toxoplasma gondii and Neospora caninum: coccidia differing in host range and transmission strategy. PLoS Pathog. 8, e1002567 (2012
-
(2012)
PLoS Pathog
, vol.8
, pp. e1002567
-
-
Reid, A.J.1
-
16
-
-
84859609287
-
Globally diverse toxoplasma gondii isolates comprise six major clades originating from a small number of distinct ancestral lineages
-
Su C. L., et al. Globally diverse Toxoplasma gondii isolates comprise six major clades originating from a small number of distinct ancestral lineages. Proc. Natl Acad. Sci. USA. 109, 5844-5849 (2012
-
(2012)
Proc. Natl Acad. Sci. USA
, vol.109
, pp. 5844-5849
-
-
Su, C.L.1
-
17
-
-
21144455796
-
Composite genome map and recombination parameters derived from three archetypal lineages of toxoplasma gondii
-
Khan A., et al. Composite genome map and recombination parameters derived from three archetypal lineages of Toxoplasma gondii. Nucleic. Acids Res. 33, 2980-2992 (2005
-
(2005)
Nucleic. Acids Res
, vol.33
, pp. 2980-2992
-
-
Khan, A.1
-
18
-
-
84907481921
-
Genomic analysis of the causative agents of coccidiosis in domestic chickens
-
Reid A. J., et al. Genomic analysis of the causative agents of coccidiosis in domestic chickens. Genome Res. 24, 1676-1685 (2014
-
(2014)
Genome Res
, vol.24
, pp. 1676-1685
-
-
Reid, A.J.1
-
19
-
-
33644787447
-
Orthomcl-db querying a comprehensive multi-species collection of ortholog groups
-
Chen F., Mackey A. J., Stoeckert, Jr C. J., & Roos D. S. OrthoMCL-DB: Querying a comprehensive multi-species collection of ortholog groups. Nucleic Acids Res. 34, D363-D368 (2006
-
(2006)
Nucleic Acids Res
, vol.34
, pp. D363-D368
-
-
Chen, F.1
Mackey, A.J.2
Stoeckert, C.J.3
Roos, D.S.4
-
20
-
-
0030925920
-
Pfam: A comprehensive database of protein families based on seed alignments
-
Sonnhamer E. L. L., Eddy S. R., & Durbin R. Pfam: a comprehensive database of protein families based on seed alignments. Proteins 3. 405-420 (1997
-
(1997)
Proteins
, vol.3
, pp. 405-420
-
-
Sonnhamer, E.L.L.1
Eddy, S.R.2
Durbin, R.3
-
21
-
-
84863828202
-
The kinomes of apicomplexan parasites
-
Miranda-Saavedra D., Gabaldon T., Barton G. J., Langsley G., & Doerig C. The kinomes of apicomplexan parasites. Microbes Infect. 14, 796-810 (2012
-
(2012)
Microbes Infect
, vol.14
, pp. 796-810
-
-
Miranda-Saavedra, D.1
Gabaldon, T.2
Barton, G.J.3
Langsley, G.4
Doerig, C.5
-
22
-
-
67649399023
-
Calcium-dependent signaling and kinases in apicomplexan parasites
-
Billker O., Lourido S., & Sibley L. D. Calcium-dependent signaling and kinases in apicomplexan parasites. Cell Host Microbe. 5, 612-622 (2009
-
(2009)
Cell Host Microbe
, vol.5
, pp. 612-622
-
-
Billker, O.1
Lourido, S.2
Sibley, L.D.3
-
23
-
-
23144448511
-
Discovery of the principal specific transcription factors of apicomplexa and their implication for the evolution of the ap2-integrase DNA binding domains
-
Balaji S., Babu M. M., Iyer L. M., & Aravind L. Discovery of the principal specific transcription factors of Apicomplexa and their implication for the evolution of the AP2-integrase DNA binding domains. Nucleic Acids Res. 33, 3994-4006 (2005
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 3994-4006
-
-
Balaji, S.1
Babu, M.M.2
Iyer, L.M.3
Aravind, L.4
-
24
-
-
84872163992
-
Integrated bioinformatic and targeted deletion analyses of the srs gene superfamily identify srs29c as a negative regulator of toxoplasma virulence
-
Wasmuth J. D., et al. Integrated bioinformatic and targeted deletion analyses of the SRS gene superfamily identify SRS29C as a negative regulator of Toxoplasma virulence. mBio 3, e00321-12 (2012
-
(2012)
Mbio
, vol.3
, pp. e00321-e00412
-
-
Wasmuth, J.D.1
-
25
-
-
84860172907
-
Structure of the plasmodium 6-cysteine s48/45 domain
-
Arredondo S. A., et al. Structure of the Plasmodium 6-cysteine s48/45 domain. Proc. Natl Acad. Sci. USA. 109, 6692-6697 (2012
-
(2012)
Proc. Natl Acad. Sci. USA
, vol.109
, pp. 6692-6697
-
-
Arredondo, S.A.1
-
26
-
-
84877115481
-
Structural and biochemical characterization of plasmodium falciparum 12 (pf12) reveals a unique interdomain organization and the potential for an antiparallel arrangement with pf41
-
Tonkin M. L., et al. Structural and biochemical characterization of Plasmodium falciparum 12 (Pf12) reveals a unique interdomain organization and the potential for an antiparallel arrangement with Pf41. J. Biol. Chem. 288, 12805-12817 (2013
-
(2013)
J. Biol. Chem
, vol.288
, pp. 12805-12817
-
-
Tonkin, M.L.1
-
27
-
-
84888149629
-
Metabolic reconstruction identifies strain-specific regulation of virulence in toxoplasma gondii
-
Song C., et al. Metabolic reconstruction identifies strain-specific regulation of virulence in Toxoplasma gondii. Mol. Syst. Biol. 9, 708 (2013
-
(2013)
Mol. Syst. Biol
, vol.9
, pp. 708
-
-
Song, C.1
-
28
-
-
79960700446
-
Jumbled genomes: Missing apicomplexan synteny
-
DeBarry J. D., & Kissinger J. C. Jumbled genomes: missing Apicomplexan synteny. Mol. Biol. Evol. 28, 2855-2871 (2011
-
(2011)
Mol. Biol. Evol
, vol.28
, pp. 2855-2871
-
-
De Barry, J.D.1
Kissinger, J.C.2
-
29
-
-
79959348595
-
Virulence differences in toxoplasma mediated by amplification of a family of polymorphic pseuodokinases
-
Behnke M. S., et al. Virulence differences in Toxoplasma mediated by amplification of a family of polymorphic pseuodokinases. Proc. Natl Acad. Sci. USA. 108, 9631-9636 (2011
-
(2011)
Proc. Natl Acad. Sci. USA
, vol.108
, pp. 9631-9636
-
-
Behnke, M.S.1
-
30
-
-
33845705275
-
A secreted serine-Threonine kinase determines virulence in the eukaryotic pathogen toxoplasma gondii
-
Taylor S., et al A secreted serine-Threonine kinase determines virulence in the eukaryotic pathogen Toxoplasma gondii. Science. 314, 1776-1780 (2006
-
(2006)
Science
, vol.314
, pp. 1776-1780
-
-
Taylor, S.1
-
31
-
-
84925009217
-
Polyploidy can drive rapid adaptation in yeast
-
Selmecki A. M., et al. Polyploidy can drive rapid adaptation in yeast. Nature. 519, 349-352 (2015
-
(2015)
Nature
, vol.519
, pp. 349-352
-
-
Selmecki, A.M.1
-
32
-
-
84903363826
-
Differential locus expansion distinguishes toxoplasmatinae species and closely related strains of toxoplasma gondii
-
Adomako-Ankomah Y., Wier G. M., Borges A. L., Wand H. E., & Boyle J. P. Differential locus expansion distinguishes Toxoplasmatinae species and closely related strains of Toxoplasma gondii. mBio 5, e01003-e01013 (2014
-
(2014)
Mbio
, vol.5
, pp. e01003-e01013
-
-
Adomako-Ankomah, Y.1
Wier, G.M.2
Borges, A.L.3
Wand, H.E.4
Boyle, J.P.5
-
33
-
-
84868468205
-
The molecular basis for the distinct host and tissue tropisms of coccidian parasites
-
Cowper B., Matthews S., & Tomley F. The molecular basis for the distinct host and tissue tropisms of coccidian parasites. Mol. Biochem. Parasitol. 186, 1-10 (2012
-
(2012)
Mol. Biochem. Parasitol
, vol.186
, pp. 1-10
-
-
Cowper, B.1
Matthews, S.2
Tomley, F.3
-
34
-
-
84892424856
-
Characterization of toxoplasma gondii subtelomeric-like regions: Identification of a long-range compositional bias that is also associated with gene-poor regions
-
Dalmasso M. C., Carmona S. J., Angel S. O., & Aguero F. Characterization of Toxoplasma gondii subtelomeric-like regions: identification of a long-range compositional bias that is also associated with gene-poor regions. BMC Genomics. 15, 21 (2014
-
(2014)
BMC Genomics
, vol.15
, pp. 21
-
-
Dalmasso, M.C.1
Carmona, S.J.2
Angel, S.O.3
Aguero, F.4
-
36
-
-
84900865946
-
Toxoplasma gondii merozoite gene expression analysis with comparison to the life cycle discloses a unique expression state during enteric development
-
Behnke M. S., Zhang T. P., Dubey J. P., & Sibley L. D. Toxoplasma gondii merozoite gene expression analysis with comparison to the life cycle discloses a unique expression state during enteric development. BMC Genomics. 15, 350 (2014
-
(2014)
BMC Genomics
, vol.15
, pp. 350
-
-
Behnke, M.S.1
Zhang, T.P.2
Dubey, J.P.3
Sibley, L.D.4
-
37
-
-
35548991888
-
Recent transcontinental sweep of toxoplasma gondii driven by a single monomorphic chromosome
-
Khan A., et al. Recent transcontinental sweep of Toxoplasma gondii driven by a single monomorphic chromosome. Proc. Natl Acad. Sci. USA. 104, 14872-14877 (2007
-
(2007)
Proc. Natl Acad. Sci. USA
, vol.104
, pp. 14872-14877
-
-
Khan, A.1
-
38
-
-
84865191421
-
Admixture and recombination among toxoplasma gondii lineages explain global genome diversity
-
Minot S., et al. Admixture and recombination among Toxoplasma gondii lineages explain global genome diversity. Proc. Natl Acad. Sci. USA. 109, 13458-13463 (2012
-
(2012)
Proc. Natl Acad. Sci. USA
, vol.109
, pp. 13458-13463
-
-
Minot, S.1
-
39
-
-
30744470609
-
Application of phylogenetic networks in evolutionary studies
-
Huson D. H., & Bryant D. Application of phylogenetic networks in evolutionary studies. Mol. Biol. Evol. 23, 254-267 (2006
-
(2006)
Mol. Biol. Evol
, vol.23
, pp. 254-267
-
-
Huson, D.H.1
Bryant, D.2
-
40
-
-
69749099417
-
Fast model-based estimation of ancestry in unrelated individuals
-
Alexander D. H., Novembre J., & Lange K. Fast model-based estimation of ancestry in unrelated individuals. Genome Res. 19, 1655-1664 (2009
-
(2009)
Genome Res
, vol.19
, pp. 1655-1664
-
-
Alexander, D.H.1
Novembre, J.2
Lange, K.3
-
41
-
-
77958192871
-
Genetic characterization of toxoplasma gondii isolates from pigs in China
-
Zhou P., et al. Genetic characterization of Toxoplasma gondii isolates from pigs in China. J. Parasitol. 96, 1027-1029 (2010
-
(2010)
J. Parasitol
, vol.96
, pp. 1027-1029
-
-
Zhou, P.1
-
42
-
-
84907588661
-
Geographic separation of domestic and wild strains of toxoplasma gondii in French guiana correlates with a monomorphic version of chromosome1a
-
Khan A., et al. Geographic separation of domestic and wild strains of Toxoplasma gondii in French Guiana correlates with a monomorphic version of chromosome1a. Plos Negl. Trop. Dis. 8, e3182 (2014
-
(2014)
Plos Negl. Trop. Dis
, vol.8
, pp. e3182
-
-
Khan, A.1
-
43
-
-
84857477622
-
Inference of population structure using dense haplotype data
-
Lawson D. J., Hellenthal G., Myers S., & Falush D. Inference of population structure using dense haplotype data. PLoS Genet. 8, e1002453 (2012
-
(2012)
PLoS Genet
, vol.8
, pp. e1002453
-
-
Lawson, D.J.1
Hellenthal, G.2
Myers, S.3
Falush, D.4
-
44
-
-
84901029147
-
Rop18 and rop17 kinase complexes synergize to control acute virulence of toxoplasma in the mouse
-
Etheridge R. D., Alagan A., Tang K., Turk B. E., & Sibley L. D. ROP18 and ROP17 kinase complexes synergize to control acute virulence of Toxoplasma in the mouse. Cell Host Microbe. 15, 537-550 (2014
-
(2014)
Cell Host Microbe
, vol.15
, pp. 537-550
-
-
Etheridge, R.D.1
Alagan, A.2
Tang, K.3
Turk, B.E.4
Sibley, L.D.5
-
45
-
-
34247505657
-
Increased efficiency of homologous recombination in toxoplasma gondii dense granule protein 3 demonstrates that gra3 is not necessary in cell culture but does contribute to virulence
-
Craver M. P., & Knoll L. J. Increased efficiency of homologous recombination in Toxoplasma gondii dense granule protein 3 demonstrates that GRA3 is not necessary in cell culture but does contribute to virulence. Mol. Biochem. Parasitol. 153, 149-157 (2007
-
(2007)
Mol. Biochem. Parasitol
, vol.153
, pp. 149-157
-
-
Craver, M.P.1
Knoll, L.J.2
-
46
-
-
1942424073
-
Identification of a sporozoite-specific member of the toxoplasma sag superfamily via genetic complementation
-
Radke J. R., et al. Identification of a sporozoite-specific member of the Toxoplasma SAG superfamily via genetic complementation. Mol. Microbiol. 52, 93-105 (2004
-
(2004)
Mol. Microbiol
, vol.52
, pp. 93-105
-
-
Radke, J.R.1
-
47
-
-
0033624164
-
Targeted disruption of the glycosylphosphatidylinositol-Anchored surface antigen sag3 gene in toxoplasma gondii decreases host cell adhesion and drastically reduces virulence in mice
-
Dzierszinski F., Mortuaire M., Cesbron-Delauw M. F., & Tomavo S. Targeted disruption of the glycosylphosphatidylinositol-Anchored surface antigen SAG3 gene in Toxoplasma gondii decreases host cell adhesion and drastically reduces virulence in mice. Mol. Microbiol. 37, 574-582 (2000
-
(2000)
Mol. Microbiol
, vol.37
, pp. 574-582
-
-
Dzierszinski, F.1
Mortuaire, M.2
Cesbron-Delauw, M.F.3
Tomavo, S.4
-
48
-
-
33745913320
-
Just one cross appears capable of dramatically altering the population biology of a eukaryotic pathogen like toxoplasma gondii
-
Boyle J. P., et al. Just one cross appears capable of dramatically altering the population biology of a eukaryotic pathogen like Toxoplasma gondii. Proc. Natl Acad. Sci. USA. 103, 10514-10519 (2006
-
(2006)
Proc. Natl Acad. Sci. USA
, vol.103
, pp. 10514-10519
-
-
Boyle, J.P.1
-
49
-
-
78650701465
-
Self-mating in the definitive host potentiates clonal outbreaks of the apicomplexan parasites sarcocystis neurona and toxoplasma gondii
-
Wendte J. M., et al. Self-mating in the definitive host potentiates clonal outbreaks of the apicomplexan parasites Sarcocystis neurona and Toxoplasma gondii. PLoS Genet. 6, e1001261 (2010
-
(2010)
PLoS Genet
, vol.6
, pp. e1001261
-
-
Wendte, J.M.1
-
50
-
-
0037015614
-
Genome sequence of the human malaria parasite plasmodium falciparum
-
Gardner M. J., et al. Genome sequence of the human malaria parasite Plasmodium falciparum. Nature. 419, 498-511 (2002
-
(2002)
Nature
, vol.419
, pp. 498-511
-
-
Gardner, M.J.1
-
51
-
-
53649104458
-
Comparative genomics of the neglected human malaria parasite plasmodium vivax
-
Carlton J. M., et al. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Nature. 455, 757-763 (2008
-
(2008)
Nature
, vol.455
, pp. 757-763
-
-
Carlton, J.M.1
-
52
-
-
22244441812
-
The genome of the african trypanosome trypanosoma brucei
-
Berriman M., et al. The genome of the African trypanosome Trypanosoma brucei. Science. 309, 416-422 (2005
-
(2005)
Science
, vol.309
, pp. 416-422
-
-
Berriman, M.1
-
53
-
-
78650126298
-
Signatures of adaptation to obligate biotrophy in the hyaloperonospora arabidopsidis genome
-
Baxter L., et al. Signatures of adaptation to obligate biotrophy in the Hyaloperonospora arabidopsidis genome. Science. 330, 1549-1551 (2010
-
(2010)
Science
, vol.330
, pp. 1549-1551
-
-
Baxter, L.1
-
54
-
-
77952886150
-
Assembly algorithms for next-generation sequencing data
-
Miller J. R., Koren S., & Sutton G. Assembly algorithms for next-generation sequencing data. Genomics. 95, 315-327 (2010
-
(2010)
Genomics
, vol.95
, pp. 315-327
-
-
Miller, J.R.1
Koren, S.2
Sutton, G.3
-
55
-
-
0036606576
-
Fast algorithms for large-scale genome alignment and comparison
-
Delcher A. L., Phillippy A., Carlton J., & Salzberg S. L. Fast algorithms for large-scale genome alignment and comparison. Nucleic Acids Res. 30, 2478-2483 (2002
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 2478-2483
-
-
Delcher, A.L.1
Phillippy, A.2
Carlton, J.3
Salzberg, S.L.4
-
56
-
-
84875445608
-
Cdd: Conserved domains and protein threedimensional structure
-
Marchler-Bauer A., et al. CDD: conserved domains and protein threedimensional structure. Nucleic Acids Res. 41, D348-D352 (2013
-
(2013)
Nucleic Acids Res
, vol.41
, pp. D348-D352
-
-
Marchler-Bauer, A.1
-
57
-
-
80055082271
-
Accelerated profile hmm searches
-
Eddy S. R. Accelerated Profile HMM Searches. PLoS Comput. Biol. 7, e1002195 (2011
-
(2011)
PLoS Comput. Biol
, vol.7
, pp. e1002195
-
-
Eddy, S.R.1
-
58
-
-
2142657817
-
A combined transmembrane topology and signal peptide prediction method
-
Kall L., Krogh A., & Sonnhammer E. L A combined transmembrane topology and signal peptide prediction method. J. Mol. Biol. 338, 1027-1036 (2004
-
(2004)
J. Mol Biol
, vol.338
, pp. 1027-1036
-
-
Kall, L.1
Krogh, A.2
Sonnhammer, E.L.3
-
59
-
-
67849122320
-
Meme suite: Tools for motif discovery and searching
-
Bailey T. L., et al. MEME SUITE: tools for motif discovery and searching. Nucleic. Acids Res. 37, W202-W208 (2009
-
(2009)
Nucleic. Acids Res
, vol.37
, pp. W202-W208
-
-
Bailey, T.L.1
-
60
-
-
84859210032
-
Fast gapped-read alignment with bowtie 2
-
Langmead B., & Salzberg S. L. Fast gapped-read alignment with Bowtie 2. Nat. Methods. 9, 357-359 (2012
-
(2012)
Nat. Methods
, vol.9
, pp. 357-359
-
-
Langmead, B.1
Salzberg, S.L.2
-
61
-
-
0141519279
-
Orthomcl identification of ortholog groups for eukaryotic genomes
-
Li L., Stoeckert, Jr C. J., & Roos D. S. OrthoMCL: identification of ortholog groups for eukaryotic genomes. Genome Res. 13, 2178-2189 (2003
-
(2003)
Genome Res
, vol.13
, pp. 2178-2189
-
-
Li, L.1
Stoeckert, C.J.2
Roos, D.S.3
-
62
-
-
68549104404
-
The sequence alignment/map format and samtools
-
Li H., et al. The Sequence Alignment/Map format and SAMtools. Bioinformatics. 25, 2078-2079 (2009
-
(2009)
Bioinformatics
, vol.25
, pp. 2078-2079
-
-
Li, H.1
-
63
-
-
33750403801
-
Raxml-VI-hpc: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
-
Stamatakis A. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics. 22, 2688-2690 (2006
-
(2006)
Bioinformatics
, vol.22
, pp. 2688-2690
-
-
Stamatakis, A.1
-
64
-
-
0019424782
-
Comparison of phylogenetic trees
-
Robinson D. R., & Foulds L. R. Comparison of phylogenetic trees. Math. Biosci. 53, 131-147 (1981
-
(1981)
Math. Biosci
, vol.53
, pp. 131-147
-
-
Robinson, D.R.1
Foulds, L.R.2
-
65
-
-
84863507534
-
Geneious basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
-
Kearse M., et al. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28, 1647-1649 (2012
-
(2012)
Bioinformatics
, vol.28
, pp. 1647-1649
-
-
Kearse, M.1
-
66
-
-
82555161647
-
Identification of tissue cyst wall components by transcriptome analysis of in vivo and in vitro toxoplasma gondii bradyzoites
-
Buchholz K. R., et al. Identification of tissue cyst wall components by transcriptome analysis of in vivo and in vitro Toxoplasma gondii bradyzoites. Eukaryot. Cell. 10, 1637-1647 (2011
-
(2011)
Eukaryot. Cell
, vol.10
, pp. 1637-1647
-
-
Buchholz, K.R.1
-
67
-
-
84863124932
-
Transcriptomic analysis of toxoplasma development reveals many novel functions and structures specific to sporozoites and oocysts
-
Fritz H. M., et al. Transcriptomic analysis of toxoplasma development reveals many novel functions and structures specific to sporozoites and oocysts. PLoS ONE 7, e29998 (2012
-
(2012)
PLoS ONE
, vol.7
, pp. e29998
-
-
Fritz, H.M.1
|