Indexed keywords
ARTICLE;
CALCULATION;
CONTROLLED STUDY;
DATA ANALYSIS SOFTWARE;
GENETIC ALGORITHM;
INFORMATION PROCESSING;
INTERMETHOD COMPARISON;
MAXIMUM LIKELIHOOD METHOD;
PHYLOGENETIC TREE;
PHYLOGENY;
PRIORITY JOURNAL;
PROCESS MODEL;
PROCESS OPTIMIZATION;
SEQUENCE ALIGNMENT;
TAXON;
ALGORITHMS;
CONSERVED SEQUENCE;
EVOLUTION, MOLECULAR;
MODELS, GENETIC;
MODELS, STATISTICAL;
PHYLOGENY;
SEQUENCE ALIGNMENT;
SEQUENCE ANALYSIS, DNA;
SEQUENCE HOMOLOGY, NUCLEIC ACID;
SOFTWARE;
SPECIES SPECIFICITY;
1
29144484019
Maximum likelihood of evolutionary trees: Hardness and approximation
Chor,B. and Tuller,T. (2005) Maximum likelihood of evolutionary trees: hardness and approximation. Bioinformatics, 21, 97-106.
(2005)
Bioinformatics
, vol.21
, pp. 97-106
Chor, B.1
Tuller, T.2
2
0242578620
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
Guindon,S. and Gascuel,O. (2003) A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol., 52, 696-704.
(2003)
Syst. Biol.
, vol.52
, pp. 696-704
Guindon, S.1
Gascuel, O.2
3
28944447963
Improving the efficiency of SPR moves in phylogenetic tree search methods based on maximum likelihood
Hordijk,W. and Gascuel,O. (2005) Improving the efficiency of SPR moves in phylogenetic tree search methods based on maximum likelihood. Bioinformatics, 21, 4338-4347.
(2005)
Bioinformatics
, vol.21
, pp. 4338-4347
Hordijk, W.1
Gascuel, O.2
4
23344442120
Obesity alters gut microbial ecology
Ley,R. et al. (2005) Obesity alters gut microbial ecology. Proc. Natl Acad. Sci. USA, 102, 11070-11075.
(2005)
Proc. Natl Acad. Sci. USA
, vol.102
, pp. 11070-11075
Ley, R.1
5
33646584137
Unexpected diversity and complexity of the guerrero negro hypersaline microbial mat
Ley,R.E. et al. (2006) Unexpected diversity and complexity of the guerrero negro hypersaline microbial mat. Appl. Envir. Microbiol., 72, 3685-3695.
(2006)
Appl. Envir. Microbiol.
, vol.72
, pp. 3685-3695
Ley, R.E.1
6
27144503359
pIQPNNI: Parallel reconstruction of large maximum likelihood phylogenies
Minh,B.Q. et al. (2005) pIQPNNI: Parallel reconstruction of large maximum likelihood phylogenies. Bioinformatics, 21, 3794-3796.
(2005)
Bioinformatics
, vol.21
, pp. 3794-3796
Minh, B.Q.1
7
27844500146
Phylogenetic diversity and ecology of environmental Archaea
Robertson,C. et al. (2005) Phylogenetic diversity and ecology of environmental Archaea. Curr. Opin. Microbiol., 8, 638-642.
(2005)
Curr. Opin. Microbiol.
, vol.8
, pp. 638-642
Robertson, C.1
8
0041386108
Mrbayes 3: Bayesian phylogenetic inference under mixed models
Ronquist,F. and Huelsenbeck,J. (2003) Mrbayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572-1574.
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
Ronquist, F.1
Huelsenbeck, J.2
9
33847112969
Phylogenetic models of rate heterogeneity: A high performance computing perspective
In Rhodos, Greece
Stamatakis,A. (2006) Phylogenetic models of rate heterogeneity: A high performance computing perspective. In Proceedings of the IPDPS2006, Rhodos, Greece.
(2006)
Proceedings of the IPDPS2006
Stamatakis, A.1
10
14644397888
Raxml-iii: A fast program for maximum likelihood-based inference of large phylogenetic trees
Stamatakis,A. et al. (2005) Raxml-iii: A fast program for maximum likelihood-based inference of large phylogenetic trees. Bioinformatics, 21, 456-463.
(2005)
Bioinformatics
, vol.21
, pp. 456-463
Stamatakis, A.1
11
33750387249
Genetic algorithm approaches for the phylogenetic analysis of large biologiical sequence datasets under the maximum likelihood criterion
PhD thesis, University of Texas at Austin, TX
Zwickl,D. (2006) Genetic algorithm approaches for the phylogenetic analysis of large biologiical sequence datasets under the maximum likelihood criterion. PhD thesis, University of Texas at Austin, TX.
(2006)
Zwickl, D.1