-
1
-
-
84876492379
-
Microbial individuality in the natural environment
-
Ackermann M. Microbial individuality in the natural environment. ISME J. 2013, 7:465-467.
-
(2013)
ISME J.
, vol.7
, pp. 465-467
-
-
Ackermann, M.1
-
2
-
-
84930795721
-
The cyclic AMP-Vfr signaling pathway in Pseudomonas aeruginosa is inhibited by cyclic di-GMP
-
Almblad H., Harrison J.J., Rybtke M., Groizeleau J., Givskov M., Parsek M., Tolker-Nielsen T. The cyclic AMP-Vfr signaling pathway in Pseudomonas aeruginosa is inhibited by cyclic di-GMP. J. Bacteriol. 2015, 197:2190-2200.
-
(2015)
J. Bacteriol.
, vol.197
, pp. 2190-2200
-
-
Almblad, H.1
Harrison, J.J.2
Rybtke, M.3
Groizeleau, J.4
Givskov, M.5
Parsek, M.6
Tolker-Nielsen, T.7
-
3
-
-
0035899964
-
Genetic data indicate that proteins containing the GGDEF domain possess diguanylate cyclase activity
-
Ausmees N., Mayer R., Weinhouse H., Volman G., Amikam D., Benziman M., Lindberg M. Genetic data indicate that proteins containing the GGDEF domain possess diguanylate cyclase activity. FEMS Microbiol. Lett. 2001, 204:163-167.
-
(2001)
FEMS Microbiol. Lett.
, vol.204
, pp. 163-167
-
-
Ausmees, N.1
Mayer, R.2
Weinhouse, H.3
Volman, G.4
Amikam, D.5
Benziman, M.6
Lindberg, M.7
-
4
-
-
0019805971
-
Specific purpose plasmid cloning vectors. II. Broad host range, high copy number, RSF1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas
-
Bagdasarian M., Lurz R., Rückert B., Franklin F.C.H., Bagdasarian M.M., Frey J., Timmis K.N. Specific purpose plasmid cloning vectors. II. Broad host range, high copy number, RSF1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas. Gene 1981, 16:237-247.
-
(1981)
Gene
, vol.16
, pp. 237-247
-
-
Bagdasarian, M.1
Lurz, R.2
Rückert, B.3
Franklin, F.C.H.4
Bagdasarian, M.M.5
Frey, J.6
Timmis, K.N.7
-
5
-
-
84867302540
-
The FleQ protein from Pseudomonas aeruginosa functions as both a repressor and an activator to control gene expression from the pel operon promoter in response to c-di-GMP
-
Baraquet C., Murakami K., Parsek M.R., Harwood C.S. The FleQ protein from Pseudomonas aeruginosa functions as both a repressor and an activator to control gene expression from the pel operon promoter in response to c-di-GMP. Nucleic Acids Res. 2012, 40:7207-7218.
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 7207-7218
-
-
Baraquet, C.1
Murakami, K.2
Parsek, M.R.3
Harwood, C.S.4
-
6
-
-
84956522448
-
Standardization of a cyclohexanone-responsive expression system for Gram-negative bacteria
-
Submitted for publication
-
Benedetti I., Nikel P.I., de Lorenzo V. Standardization of a cyclohexanone-responsive expression system for Gram-negative bacteria. Data in Brief 2015, Submitted for publication.
-
(2015)
Data in Brief
-
-
Benedetti, I.1
Nikel, P.I.2
de Lorenzo, V.3
-
7
-
-
0001520086
-
Determination of trace amounts of chlorine in naphtha
-
Bergmann J.G., Sanik J. Determination of trace amounts of chlorine in naphtha. Anal. Chem. 1957, 29:241-243.
-
(1957)
Anal. Chem.
, vol.29
, pp. 241-243
-
-
Bergmann, J.G.1
Sanik, J.2
-
8
-
-
84940467268
-
Engineered catalytic biofilms: site-specific enzyme immobilization onto E. coli curli nanofibers
-
Botyanszki Z., Tay P.K., Nguyen P.Q., Nussbaumer M.G., Joshi N.S. Engineered catalytic biofilms: site-specific enzyme immobilization onto E. coli curli nanofibers. Biotechnol. Bioeng. 2015, 112:2016-2024.
-
(2015)
Biotechnol. Bioeng.
, vol.112
, pp. 2016-2024
-
-
Botyanszki, Z.1
Tay, P.K.2
Nguyen, P.Q.3
Nussbaumer, M.G.4
Joshi, N.S.5
-
9
-
-
0014674485
-
A complementation analysis of the restriction and modification of DNA in Escherichia coli
-
Boyer H.W., Roulland-Dussoix D. A complementation analysis of the restriction and modification of DNA in Escherichia coli. J. Mol. Biol. 1969, 41:459-472.
-
(1969)
J. Mol. Biol.
, vol.41
, pp. 459-472
-
-
Boyer, H.W.1
Roulland-Dussoix, D.2
-
10
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford M.M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 1976, 72:248-254.
-
(1976)
Anal. Biochem.
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
11
-
-
84919740877
-
Targeting cyclic di-GMP signalling: a strategy to control biofilm formation?
-
Caly D.L., Bellini D., Walsh M.A., Dow J.M., Ryan R.P. Targeting cyclic di-GMP signalling: a strategy to control biofilm formation?. Curr. Pharm. Des. 2015, 21:12-24.
-
(2015)
Curr. Pharm. Des.
, vol.21
, pp. 12-24
-
-
Caly, D.L.1
Bellini, D.2
Walsh, M.A.3
Dow, J.M.4
Ryan, R.P.5
-
12
-
-
84914124934
-
Enhanced uranium immobilization and reduction by Geobacter sulfurreducens biofilms
-
Cologgi D.L., Speers A.M., Bullard B.A., Kelly S.D., Reguera G. Enhanced uranium immobilization and reduction by Geobacter sulfurreducens biofilms. Appl. Environ. Microbiol. 2014, 80:6638-6646.
-
(2014)
Appl. Environ. Microbiol.
, vol.80
, pp. 6638-6646
-
-
Cologgi, D.L.1
Speers, A.M.2
Bullard, B.A.3
Kelly, S.D.4
Reguera, G.5
-
13
-
-
78651511022
-
TOL plasmid carriage enhances biofilm formation and increases extracellular DNA content in Pseudomonas putida KT2440
-
D'Alvise P.W., Sjøholm O.R., Yankelevich T., Jin Y., Wuertz S., Smets B.F. TOL plasmid carriage enhances biofilm formation and increases extracellular DNA content in Pseudomonas putida KT2440. FEMS Microbiol. Lett. 2010, 312:84-92.
-
(2010)
FEMS Microbiol. Lett.
, vol.312
, pp. 84-92
-
-
D'Alvise, P.W.1
Sjøholm, O.R.2
Yankelevich, T.3
Jin, Y.4
Wuertz, S.5
Smets, B.F.6
-
14
-
-
44649098831
-
Synthetic morphology: prospects for engineered, self-constructing anatomies
-
Davies J.A. Synthetic morphology: prospects for engineered, self-constructing anatomies. J. Anat. 2008, 212:707-719.
-
(2008)
J. Anat.
, vol.212
, pp. 707-719
-
-
Davies, J.A.1
-
15
-
-
84891956059
-
Microbial heterogeneity affects bioprocess robustness: dynamic single-cell analysis contributes to understanding of microbial populations
-
Delvigne F., Goffin P. Microbial heterogeneity affects bioprocess robustness: dynamic single-cell analysis contributes to understanding of microbial populations. Biotechnol. J. 2013, 9:61-72.
-
(2013)
Biotechnol. J.
, vol.9
, pp. 61-72
-
-
Delvigne, F.1
Goffin, P.2
-
17
-
-
84903692703
-
Regulation of biofilm formation in Pseudomonas and Burkholderia species
-
Fazli M., Almblad H., Rybtke M.L., Givskov M., Eberl L., Tolker-Nielsen T. Regulation of biofilm formation in Pseudomonas and Burkholderia species. Environ. Microbiol. 2014, 16:1961-1981.
-
(2014)
Environ. Microbiol.
, vol.16
, pp. 1961-1981
-
-
Fazli, M.1
Almblad, H.2
Rybtke, M.L.3
Givskov, M.4
Eberl, L.5
Tolker-Nielsen, T.6
-
19
-
-
18944375979
-
Characterization of starvation-induced dispersion in Pseudomonas putida biofilms
-
Gjermansen M., Ragas P., Sternberg C., Molin S., Tolker-Nielsen T. Characterization of starvation-induced dispersion in Pseudomonas putida biofilms. Environ. Microbiol. 2005, 7:894-906.
-
(2005)
Environ. Microbiol.
, vol.7
, pp. 894-906
-
-
Gjermansen, M.1
Ragas, P.2
Sternberg, C.3
Molin, S.4
Tolker-Nielsen, T.5
-
20
-
-
33751245559
-
Proteins with GGDEF and EAL domains regulate Pseudomonas putida biofilm formation and dispersal
-
Gjermansen M., Ragas P., Tolker-Nielsen T. Proteins with GGDEF and EAL domains regulate Pseudomonas putida biofilm formation and dispersal. FEMS Microbiol. Lett. 2006, 265:215-224.
-
(2006)
FEMS Microbiol. Lett.
, vol.265
, pp. 215-224
-
-
Gjermansen, M.1
Ragas, P.2
Tolker-Nielsen, T.3
-
21
-
-
76449086560
-
Characterization of starvation-induced dispersion in Pseudomonas putida biofilms: genetic elements and molecular mechanisms
-
Gjermansen M., Nilsson M., Yang L., Tolker-Nielsen T. Characterization of starvation-induced dispersion in Pseudomonas putida biofilms: genetic elements and molecular mechanisms. Mol. Microbiol. 2010, 75:815-826.
-
(2010)
Mol. Microbiol.
, vol.75
, pp. 815-826
-
-
Gjermansen, M.1
Nilsson, M.2
Yang, L.3
Tolker-Nielsen, T.4
-
22
-
-
84871913034
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, USA
-
Green M.R., Sambrook J. Molecular cloning: a laboratory manual 2012, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, USA.
-
(2012)
Molecular cloning: a laboratory manual
-
-
Green, M.R.1
Sambrook, J.2
-
23
-
-
79953208660
-
Real-time solvent tolerance analysis of Pseudomonas sp. strain VLB120DC catalytic biofilms
-
Halan B., Schmid A., Buehler K. Real-time solvent tolerance analysis of Pseudomonas sp. strain VLB120DC catalytic biofilms. Appl. Environ. Microbiol. 2011, 77:1563-1571.
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 1563-1571
-
-
Halan, B.1
Schmid, A.2
Buehler, K.3
-
24
-
-
84865179767
-
Biofilms as living catalysts in continuous chemical syntheses
-
Halan B., Buehler K., Schmid A. Biofilms as living catalysts in continuous chemical syntheses. Trends Biotechnol. 2012, 30:453-465.
-
(2012)
Trends Biotechnol.
, vol.30
, pp. 453-465
-
-
Halan, B.1
Buehler, K.2
Schmid, A.3
-
25
-
-
84908478401
-
Solid support membrane-aerated catalytic biofilm reactor for the continuous synthesis of (S)-styrene oxide at gram scale
-
Halan B., Letzel T., Schmid A., Buehler K. Solid support membrane-aerated catalytic biofilm reactor for the continuous synthesis of (S)-styrene oxide at gram scale. Biotechnol. J. 2014, 9:1339-1349.
-
(2014)
Biotechnol. J.
, vol.9
, pp. 1339-1349
-
-
Halan, B.1
Letzel, T.2
Schmid, A.3
Buehler, K.4
-
26
-
-
63049137897
-
Principles of c-di-GMP signalling in bacteria
-
Hengge R. Principles of c-di-GMP signalling in bacteria. Nat. Rev. Microbiol. 2009, 7:263-273.
-
(2009)
Nat. Rev. Microbiol.
, vol.7
, pp. 263-273
-
-
Hengge, R.1
-
27
-
-
0025047590
-
Transposon vectors containing non-antibiotic resistance selection markers for cloning and stable chromosomal insertion of foreign genes in Gram-negative bacteria
-
Herrero M., de Lorenzo V., Timmis K.N. Transposon vectors containing non-antibiotic resistance selection markers for cloning and stable chromosomal insertion of foreign genes in Gram-negative bacteria. J. Bacteriol. 1990, 172:6557-6567.
-
(1990)
J. Bacteriol.
, vol.172
, pp. 6557-6567
-
-
Herrero, M.1
de Lorenzo, V.2
Timmis, K.N.3
-
28
-
-
1842479420
-
Evolving haloalkane dehalogenases
-
Janssen D.B. Evolving haloalkane dehalogenases. Curr. Opin. Chem. Biol. 2004, 8:150-159.
-
(2004)
Curr. Opin. Chem. Biol.
, vol.8
, pp. 150-159
-
-
Janssen, D.B.1
-
29
-
-
84948118397
-
Continuous cyclohexane oxidation to cyclohexanol using a novel cytochrome P450 monooxygenase from Acidovorax sp. CHX100 in recombinant P. taiwanensis VLB120 biofilms
-
(in press)
-
Karande R., Debor L., Salamanca D., Bogdahn F., Engesser K., Buehler K., Schmid A. Continuous cyclohexane oxidation to cyclohexanol using a novel cytochrome P450 monooxygenase from Acidovorax sp. CHX100 in recombinant P. taiwanensis VLB120 biofilms. Biotechnol. Bioeng. 2015, (in press). 10.1002/bit.25696.
-
(2015)
Biotechnol. Bioeng.
-
-
Karande, R.1
Debor, L.2
Salamanca, D.3
Bogdahn, F.4
Engesser, K.5
Buehler, K.6
Schmid, A.7
-
30
-
-
0023715368
-
Improved broad-host-range plasmids for DNA cloning in Gram-negative bacteria
-
Keen N.T., Tamaki S., Kobayashi D., Trollinger D. Improved broad-host-range plasmids for DNA cloning in Gram-negative bacteria. Gene 1988, 70:191-197.
-
(1988)
Gene
, vol.70
, pp. 191-197
-
-
Keen, N.T.1
Tamaki, S.2
Kobayashi, D.3
Trollinger, D.4
-
31
-
-
84871749232
-
Haloalkane dehalogenases: biotechnological applications
-
Koudelakova T., Bidmanova S., Dvorak P., Pavelka A., Chaloupkova R., Prokop Z., Damborsky J. Haloalkane dehalogenases: biotechnological applications. Biotechnol. J. 2013, 8:32-45.
-
(2013)
Biotechnol. J.
, vol.8
, pp. 32-45
-
-
Koudelakova, T.1
Bidmanova, S.2
Dvorak, P.3
Pavelka, A.4
Chaloupkova, R.5
Prokop, Z.6
Damborsky, J.7
-
32
-
-
0028793123
-
Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes
-
Kovach M.E., Elzer P.H., Hill D.S., Robertson G.T., Farris M.A., Roop R.M., Peterson K.M. Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes. Gene 1995, 166:175-176.
-
(1995)
Gene
, vol.166
, pp. 175-176
-
-
Kovach, M.E.1
Elzer, P.H.2
Hill, D.S.3
Robertson, G.T.4
Farris, M.A.5
Roop, R.M.6
Peterson, K.M.7
-
33
-
-
77956357900
-
Escherichia coli K-12 YfgF is an anaerobic cyclic di-GMP phosphodiesterase with roles in cell surface remodelling and the oxidative stress response
-
Lacey M.M., Partridge J.D., Green J. Escherichia coli K-12 YfgF is an anaerobic cyclic di-GMP phosphodiesterase with roles in cell surface remodelling and the oxidative stress response. Microbiology 2010, 156:2873-2886.
-
(2010)
Microbiology
, vol.156
, pp. 2873-2886
-
-
Lacey, M.M.1
Partridge, J.D.2
Green, J.3
-
34
-
-
84873850734
-
Catalytic biofilms on structured packing for the production of glycolic acid
-
Li X.Z., Hauer B., Rosche B. Catalytic biofilms on structured packing for the production of glycolic acid. J. Microbiol. Biotechnol. 2013, 23:195-204.
-
(2013)
J. Microbiol. Biotechnol.
, vol.23
, pp. 195-204
-
-
Li, X.Z.1
Hauer, B.2
Rosche, B.3
-
35
-
-
84928889890
-
The expanding roles of c-di-GMP in the biosynthesis of exopolysaccharides and secondary metabolites
-
Liang Z.X. The expanding roles of c-di-GMP in the biosynthesis of exopolysaccharides and secondary metabolites. Nat. Prod. Rep. 2015, 32:663-683.
-
(2015)
Nat. Prod. Rep.
, vol.32
, pp. 663-683
-
-
Liang, Z.X.1
-
36
-
-
82355181976
-
Transposon-based and plasmid-based genetic tools for editing genomes of Gram-negative bacteria
-
Martínez-García E., de Lorenzo V. Transposon-based and plasmid-based genetic tools for editing genomes of Gram-negative bacteria. Methods Mol. Biol. 2012, 813:267-283.
-
(2012)
Methods Mol. Biol.
, vol.813
, pp. 267-283
-
-
Martínez-García, E.1
de Lorenzo, V.2
-
37
-
-
84946019816
-
New transposon tools tailored for metabolic engineering of Gram-negative microbial cell factories
-
Martínez-García E., Aparicio T., de Lorenzo V., Nikel P.I. New transposon tools tailored for metabolic engineering of Gram-negative microbial cell factories. Front. Bioeng. Biotechnol. 2014, 2:46.
-
(2014)
Front. Bioeng. Biotechnol.
, vol.2
, pp. 46
-
-
Martínez-García, E.1
Aparicio, T.2
de Lorenzo, V.3
Nikel, P.I.4
-
38
-
-
84941112071
-
SEVA 2.0: an update of the Standard European Vector Architecture for de-/re-construction of bacterial functionalities
-
Martínez-García E., Aparicio T., Goñi-Moreno A., Fraile S., de Lorenzo V. SEVA 2.0: an update of the Standard European Vector Architecture for de-/re-construction of bacterial functionalities. Nucleic Acids Res. 2014, 43:D1183-D1189.
-
(2014)
Nucleic Acids Res.
, vol.43
, pp. D1183-D1189
-
-
Martínez-García, E.1
Aparicio, T.2
Goñi-Moreno, A.3
Fraile, S.4
de Lorenzo, V.5
-
39
-
-
84921889421
-
Freeing Pseudomonas putida KT2440 of its proviral load strengthens endurance to environmental stresses
-
Martínez-García E., Jatsenko T., Kivisaar M., de Lorenzo V. Freeing Pseudomonas putida KT2440 of its proviral load strengthens endurance to environmental stresses. Environ. Microbiol. 2014, 17:76-90.
-
(2014)
Environ. Microbiol.
, vol.17
, pp. 76-90
-
-
Martínez-García, E.1
Jatsenko, T.2
Kivisaar, M.3
de Lorenzo, V.4
-
40
-
-
84964313870
-
Pseudomonas 2.0: genetic upgrading of P. putida KT2440 as an enhanced host for heterologous gene expression
-
Martínez-García E., Nikel P.I., Aparicio T., de Lorenzo V. Pseudomonas 2.0: genetic upgrading of P. putida KT2440 as an enhanced host for heterologous gene expression. Microb. Cell Factories 2014, 13:159.
-
(2014)
Microb. Cell Factories
, vol.13
, pp. 159
-
-
Martínez-García, E.1
Nikel, P.I.2
Aparicio, T.3
de Lorenzo, V.4
-
42
-
-
10044292705
-
Insights into the genomic basis of niche specificity of Pseudomonas putida KT2440
-
Martins dos Santos V.A.P., Heim S., Moore E.R., Strätz M., Timmis K.N. Insights into the genomic basis of niche specificity of Pseudomonas putida KT2440. Environ. Microbiol. 2004, 6:1264-1286.
-
(2004)
Environ. Microbiol.
, vol.6
, pp. 1264-1286
-
-
Martins dos Santos, V.A.P.1
Heim, S.2
Moore, E.R.3
Strätz, M.4
Timmis, K.N.5
-
43
-
-
0036933705
-
Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440
-
Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H., Martins dos Santos V.A.P., Fouts D.E., Gill S.R., Pop M., Holmes M., Brinkac L., Beanan M., DeBoy R.T., Daugherty S., Kolonay J., Madupu R., Nelson W., White O., Peterson J., Khouri H., Hance I., Chris Lee P., Holtzapple E., Scanlan D., Tran K., Moazzez A., Utterback T., Rizzo M., Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D., Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J.A., Timmis K.N., Düsterhöft A., Tümmler B., Fraser C.M. Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440. Environ. Microbiol. 2002, 4:799-808.
-
(2002)
Environ. Microbiol.
, vol.4
, pp. 799-808
-
-
Nelson, K.E.1
Weinel, C.2
Paulsen, I.T.3
Dodson, R.J.4
Hilbert, H.5
Martins dos Santos, V.A.P.6
Fouts, D.E.7
Gill, S.R.8
Pop, M.9
Holmes, M.10
Brinkac, L.11
Beanan, M.12
DeBoy, R.T.13
Daugherty, S.14
Kolonay, J.15
Madupu, R.16
Nelson, W.17
White, O.18
Peterson, J.19
Khouri, H.20
Hance, I.21
Chris Lee, P.22
Holtzapple, E.23
Scanlan, D.24
Tran, K.25
Moazzez, A.26
Utterback, T.27
Rizzo, M.28
Lee, K.29
Kosack, D.30
Moestl, D.31
Wedler, H.32
Lauber, J.33
Stjepandic, D.34
Hoheisel, J.35
Straetz, M.36
Heim, S.37
Kiewitz, C.38
Eisen, J.A.39
Timmis, K.N.40
Düsterhöft, A.41
Tümmler, B.42
Fraser, C.M.43
more..
-
44
-
-
84910046527
-
A brief guide to Pseudomonas putida as a microbial cell factory
-
Nikel P.I. A brief guide to Pseudomonas putida as a microbial cell factory. BioEssays 2012, Available on line at: 〈http://goo.gl/DXF1y〉.
-
(2012)
BioEssays
-
-
Nikel, P.I.1
-
45
-
-
84871436225
-
Engineering an anaerobic metabolic regime in Pseudomonas putida KT2440 for the anoxic biodegradation of 1,3-dichloroprop-1-ene
-
Nikel P.I., de Lorenzo V. Engineering an anaerobic metabolic regime in Pseudomonas putida KT2440 for the anoxic biodegradation of 1,3-dichloroprop-1-ene. Metab. Eng. 2013, 15:98-112.
-
(2013)
Metab. Eng.
, vol.15
, pp. 98-112
-
-
Nikel, P.I.1
de Lorenzo, V.2
-
46
-
-
84872193848
-
Implantation of unmarked regulatory and metabolic modules in Gram-negative bacteria with specialised mini-transposon delivery vectors
-
Nikel P.I., de Lorenzo V. Implantation of unmarked regulatory and metabolic modules in Gram-negative bacteria with specialised mini-transposon delivery vectors. J. Biotechnol. 2013, 163:143-154.
-
(2013)
J. Biotechnol.
, vol.163
, pp. 143-154
-
-
Nikel, P.I.1
de Lorenzo, V.2
-
47
-
-
84877842924
-
Accumulation of inorganic polyphosphate enables stress endurance and catalytic vigour in Pseudomonas putida KT2440
-
Nikel P.I., Chavarría M., Martínez-García E., Taylor A.C., de Lorenzo V. Accumulation of inorganic polyphosphate enables stress endurance and catalytic vigour in Pseudomonas putida KT2440. Microb. Cell Factories 2013, 12:50.
-
(2013)
Microb. Cell Factories
, vol.12
, pp. 50
-
-
Nikel, P.I.1
Chavarría, M.2
Martínez-García, E.3
Taylor, A.C.4
de Lorenzo, V.5
-
48
-
-
84875059461
-
Why are chlorinated pollutants so difficult to degrade aerobically? Redox stress limits 1,3-dichloroprop-1-ene metabolism by Pseudomonas pavonaceae
-
Nikel P.I., Pérez-Pantoja D., de Lorenzo V. Why are chlorinated pollutants so difficult to degrade aerobically? Redox stress limits 1,3-dichloroprop-1-ene metabolism by Pseudomonas pavonaceae. Philos. Trans. R. Soc. Lond. B: Biol. Sci. 2013, 368:20120377.
-
(2013)
Philos. Trans. R. Soc. Lond. B: Biol. Sci.
, vol.368
, pp. 20120377
-
-
Nikel, P.I.1
Pérez-Pantoja, D.2
de Lorenzo, V.3
-
49
-
-
84898874640
-
Biotechnological domestication of pseudomonads using synthetic biology
-
Nikel P.I., Martínez-García E., de Lorenzo V. Biotechnological domestication of pseudomonads using synthetic biology. Nat. Rev. Microbiol. 2014, 12:368-379.
-
(2014)
Nat. Rev. Microbiol.
, vol.12
, pp. 368-379
-
-
Nikel, P.I.1
Martínez-García, E.2
de Lorenzo, V.3
-
50
-
-
84896710626
-
The private life of environmental bacteria: pollutant biodegradation at the single cell level
-
Nikel P.I., Silva-Rocha R., Benedetti I., de Lorenzo V. The private life of environmental bacteria: pollutant biodegradation at the single cell level. Environ. Microbiol. 2014, 16:628-642.
-
(2014)
Environ. Microbiol.
, vol.16
, pp. 628-642
-
-
Nikel, P.I.1
Silva-Rocha, R.2
Benedetti, I.3
de Lorenzo, V.4
-
51
-
-
84944910018
-
Pseudomonas putida KT2440 strain metabolizes glucose through a cycle formed by enzymes of the Entner-Doudoroff, Embden-Meyerhof-Parnas, and pentose phosphate pathways
-
Nikel P.I., Chavarría M., Fuhrer T., Sauer U., de Lorenzo V. Pseudomonas putida KT2440 strain metabolizes glucose through a cycle formed by enzymes of the Entner-Doudoroff, Embden-Meyerhof-Parnas, and pentose phosphate pathways. J. Biol. Chem. 2015, 290:25920-25932.
-
(2015)
J. Biol. Chem.
, vol.290
, pp. 25920-25932
-
-
Nikel, P.I.1
Chavarría, M.2
Fuhrer, T.3
Sauer, U.4
de Lorenzo, V.5
-
52
-
-
84928793736
-
The glycerol-dependent metabolic persistence of Pseudomonas putida KT2440 reflects the regulatory logic of the GlpR repressor
-
e00340-00315
-
Nikel P.I., Romero-Campero F.J., Zeidman J.A., Goñi-Moreno A., de Lorenzo V. The glycerol-dependent metabolic persistence of Pseudomonas putida KT2440 reflects the regulatory logic of the GlpR repressor. mBio 2015, 6:e00340-00315.
-
(2015)
mBio
, vol.6
-
-
Nikel, P.I.1
Romero-Campero, F.J.2
Zeidman, J.A.3
Goñi-Moreno, A.4
de Lorenzo, V.5
-
54
-
-
0031724115
-
Flagellar and twitching motility are necessary for Pseudomonas aeruginosa biofilm development
-
O'Toole G.A., Kolter R. Flagellar and twitching motility are necessary for Pseudomonas aeruginosa biofilm development. Mol. Microbiol. 1998, 30:295-304.
-
(1998)
Mol. Microbiol.
, vol.30
, pp. 295-304
-
-
O'Toole, G.A.1
Kolter, R.2
-
55
-
-
84941254999
-
Oligoribonuclease is the primary degradative enzyme for pGpG in Pseudomonas aeruginosa that is required for cyclic-di-GMP turnover
-
Orr M.W., Donaldson G.P., Severin G.B., Wang J., Sintim H.O., Waters C.M., Lee V.T. Oligoribonuclease is the primary degradative enzyme for pGpG in Pseudomonas aeruginosa that is required for cyclic-di-GMP turnover. Proc. Natl. Acad. Sci. USA 2015, 112:E5048-EE5057.
-
(2015)
Proc. Natl. Acad. Sci. USA
, vol.112
, pp. E5048-EE5057
-
-
Orr, M.W.1
Donaldson, G.P.2
Severin, G.B.3
Wang, J.4
Sintim, H.O.5
Waters, C.M.6
Lee, V.T.7
-
56
-
-
84880435450
-
Genetic dissection of a motility-associated c-di-GMP signalling protein of Pseudomonas putida
-
Österberg S., Åberg A., Herrera Seitz M.K., Wolf-Watz M., Shingler V. Genetic dissection of a motility-associated c-di-GMP signalling protein of Pseudomonas putida. Environ. Microbiol. Rep. 2013, 5:556-565.
-
(2013)
Environ. Microbiol. Rep.
, vol.5
, pp. 556-565
-
-
Österberg, S.1
Åberg, A.2
Herrera Seitz, M.K.3
Wolf-Watz, M.4
Shingler, V.5
-
57
-
-
33947155714
-
Multiple roles of biosurfactants in structural biofilm development by Pseudomonas aeruginosa
-
Pamp S.J., Tolker-Nielsen T. Multiple roles of biosurfactants in structural biofilm development by Pseudomonas aeruginosa. J. Bacteriol. 2007, 189:2531-2539.
-
(2007)
J. Bacteriol.
, vol.189
, pp. 2531-2539
-
-
Pamp, S.J.1
Tolker-Nielsen, T.2
-
58
-
-
84891446993
-
Optimisation of engineered Escherichia coli biofilms for enzymatic biosynthesis of L-halotryptophans
-
Perni S., Hackett L., Goss R.J.M., Simmons M.J., Overton T.W. Optimisation of engineered Escherichia coli biofilms for enzymatic biosynthesis of L-halotryptophans. AMB Express 2013, 3:66.
-
(2013)
AMB Express
, vol.3
, pp. 66
-
-
Perni, S.1
Hackett, L.2
Goss, R.J.M.3
Simmons, M.J.4
Overton, T.W.5
-
59
-
-
84862292281
-
Industrial biotechnology of Pseudomonas putida and related species
-
Poblete-Castro I., Becker J., Dohnt K., Martins dos Santos V.A.P., Wittmann C. Industrial biotechnology of Pseudomonas putida and related species. Appl. Microbiol. Biotechnol. 2012, 93:2279-2290.
-
(2012)
Appl. Microbiol. Biotechnol.
, vol.93
, pp. 2279-2290
-
-
Poblete-Castro, I.1
Becker, J.2
Dohnt, K.3
Martins dos Santos, V.A.P.4
Wittmann, C.5
-
60
-
-
0031879208
-
Degradation of 1,3-dichloropropene by Pseudomonas cichorii 170
-
Poelarends G.J., Wilkens M., Larkin M.J., van Elsas J.D., Janssen D.B. Degradation of 1,3-dichloropropene by Pseudomonas cichorii 170. Appl. Environ. Microbiol. 1998, 64:2931-2936.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 2931-2936
-
-
Poelarends, G.J.1
Wilkens, M.2
Larkin, M.J.3
van Elsas, J.D.4
Janssen, D.B.5
-
61
-
-
84874914744
-
Cyclic di-GMP: the first 25 years of a universal bacterial second messenger
-
Römling U., Galperin M.Y., Gomelsky M. Cyclic di-GMP: the first 25 years of a universal bacterial second messenger. Microbiol. Mol. Biol. Rev. 2013, 77:1-52.
-
(2013)
Microbiol. Mol. Biol. Rev.
, vol.77
, pp. 1-52
-
-
Römling, U.1
Galperin, M.Y.2
Gomelsky, M.3
-
62
-
-
70349845435
-
Microbial biofilms: a concept for industrial catalysis?
-
Rosche B., Li X.Z., Hauer B., Schmid A., Buehler K. Microbial biofilms: a concept for industrial catalysis?. Trends Biotechnol. 2009, 27:636-643.
-
(2009)
Trends Biotechnol.
, vol.27
, pp. 636-643
-
-
Rosche, B.1
Li, X.Z.2
Hauer, B.3
Schmid, A.4
Buehler, K.5
-
63
-
-
33645464499
-
Dye (arc) Mutants: insights into an unexplained phenotype and its suppression by the synthesis of poly(3-hydroxybutyrate) in Escherichia coli recombinants
-
Ruiz J.A., Fernández R.O., Nikel P.I., Méndez B.S., Pettinari M.J. dye (arc) Mutants: insights into an unexplained phenotype and its suppression by the synthesis of poly(3-hydroxybutyrate) in Escherichia coli recombinants. FEMS Microbiol. Lett. 2006, 258:55-60.
-
(2006)
FEMS Microbiol. Lett.
, vol.258
, pp. 55-60
-
-
Ruiz, J.A.1
Fernández, R.O.2
Nikel, P.I.3
Méndez, B.S.4
Pettinari, M.J.5
-
64
-
-
70349274104
-
Structural and mechanistic determinants of c-di-GMP signalling
-
Schirmer T., Jenal U. Structural and mechanistic determinants of c-di-GMP signalling. Nat. Rev. Microbiol. 2009, 7:724-735.
-
(2009)
Nat. Rev. Microbiol.
, vol.7
, pp. 724-735
-
-
Schirmer, T.1
Jenal, U.2
-
66
-
-
0038798524
-
Sequences of versatile broad-host-range vectors of the RK2 family
-
Scott H.N., Laible P.D., Hanson D.K. Sequences of versatile broad-host-range vectors of the RK2 family. Plasmid 2003, 50:74-79.
-
(2003)
Plasmid
, vol.50
, pp. 74-79
-
-
Scott, H.N.1
Laible, P.D.2
Hanson, D.K.3
-
67
-
-
84876567509
-
The Standard European Vector Architecture (SEVA): a coherent platform for the analysis and deployment of complex prokaryotic phenotypes
-
Silva-Rocha R., Martínez-García E., Calles B., Chavarría M., Arce-Rodríguez A., de las Heras A., Páez-Espino A.D., Durante-Rodríguez G., Kim J., Nikel P.I., Platero R., de Lorenzo V. The Standard European Vector Architecture (SEVA): a coherent platform for the analysis and deployment of complex prokaryotic phenotypes. Nucleic Acids Res. 2013, 41:D666-D675.
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. D666-D675
-
-
Silva-Rocha, R.1
Martínez-García, E.2
Calles, B.3
Chavarría, M.4
Arce-Rodríguez, A.5
de las Heras, A.6
Páez-Espino, A.D.7
Durante-Rodríguez, G.8
Kim, J.9
Nikel, P.I.10
Platero, R.11
de Lorenzo, V.12
-
68
-
-
4344688129
-
GGDEF and EAL domains inversely regulate cyclic di-GMP levels and transition from sessility to motility
-
Simm R., Morr M., Kader A., Nimtz M., Römling U. GGDEF and EAL domains inversely regulate cyclic di-GMP levels and transition from sessility to motility. Mol. Microbiol. 2004, 53:1123-1134.
-
(2004)
Mol. Microbiol.
, vol.53
, pp. 1123-1134
-
-
Simm, R.1
Morr, M.2
Kader, A.3
Nimtz, M.4
Römling, U.5
-
69
-
-
0031060628
-
Microbial dehalogenation of halogenated alkanoic acids, alcohols and alkanes
-
Slater J., Bull A., Hardman D. Microbial dehalogenation of halogenated alkanoic acids, alcohols and alkanes. Adv. Microb. Physiol. 1997, 38:133-176.
-
(1997)
Adv. Microb. Physiol.
, vol.38
, pp. 133-176
-
-
Slater, J.1
Bull, A.2
Hardman, D.3
-
70
-
-
66049142620
-
Genetic reductionist approach for dissecting individual roles of GGDEF proteins within the c-di-GMP signaling network in Salmonella
-
Solano C., García B., Latasa C., Toledo-Arana A., Zorraquino V., Valle J., Casals J., Pedroso E., Lasa I. Genetic reductionist approach for dissecting individual roles of GGDEF proteins within the c-di-GMP signaling network in Salmonella. Proc. Natl. Acad. Sci. USA 2009, 106:7997-8002.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 7997-8002
-
-
Solano, C.1
García, B.2
Latasa, C.3
Toledo-Arana, A.4
Zorraquino, V.5
Valle, J.6
Casals, J.7
Pedroso, E.8
Lasa, I.9
-
71
-
-
84868372310
-
Enzymatically active and inactive phosphodiesterases and diguanylate cyclases are involved in regulation of motility or sessility in Escherichia coli CFT073
-
Spurbeck R.R., Tarrien R.J., Mobley H.L. Enzymatically active and inactive phosphodiesterases and diguanylate cyclases are involved in regulation of motility or sessility in Escherichia coli CFT073. mBio 2012, 3:e00307-e00312.
-
(2012)
mBio
, vol.3
, pp. e00307-e00312
-
-
Spurbeck, R.R.1
Tarrien, R.J.2
Mobley, H.L.3
-
72
-
-
70349177735
-
Synthetic morphology using alternative inputs
-
Tanaka H., Yi T.M. Synthetic morphology using alternative inputs. PLoS One 2009, 4:e6946.
-
(2009)
PLoS One
, vol.4
, pp. e6946
-
-
Tanaka, H.1
Yi, T.M.2
-
73
-
-
0036937672
-
Pseudomonas putida: a cosmopolitan opportunist par excellence
-
Timmis K.N. Pseudomonas putida: a cosmopolitan opportunist par excellence. Environ. Microbiol. 2002, 4:779-781.
-
(2002)
Environ. Microbiol.
, vol.4
, pp. 779-781
-
-
Timmis, K.N.1
-
74
-
-
0033764830
-
Development and dynamics of Pseudomonas sp. biofilms
-
Tolker-Nielsen T., Brinch U.C., Ragas P.C., Andersen J.B., Jacobsen C.S., Molin S. Development and dynamics of Pseudomonas sp. biofilms. J. Bacteriol. 2000, 182:6482-6489.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 6482-6489
-
-
Tolker-Nielsen, T.1
Brinch, U.C.2
Ragas, P.C.3
Andersen, J.B.4
Jacobsen, C.S.5
Molin, S.6
-
75
-
-
84925537765
-
Characterization of the ability to form biofilms by plant-associated Pseudomonas species
-
Ueda A., Saneoka H. Characterization of the ability to form biofilms by plant-associated Pseudomonas species. Curr. Microbiol. 2014, 70:506-513.
-
(2014)
Curr. Microbiol.
, vol.70
, pp. 506-513
-
-
Ueda, A.1
Saneoka, H.2
-
76
-
-
84949828112
-
Tn7-based device for calibrated heterologous gene expression in Pseudomonas putida. ACS
-
(in press)
-
Zoebel S., Benedetti I., Eisenbach L., de Lorenzo V., Wierckx N., Blank L.M. Tn7-based device for calibrated heterologous gene expression in Pseudomonas putida. ACS. Synth. Biol. 2015, (in press). 10.1021/acssynbio.1025b00058.
-
(2015)
Synth. Biol.
-
-
Zoebel, S.1
Benedetti, I.2
Eisenbach, L.3
de Lorenzo, V.4
Wierckx, N.5
Blank, L.M.6
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