메뉴 건너뛰기




Volumn 813, Issue , 2012, Pages 267-283

Transposon-based and plasmid-based genetic tools for editing genomes of gram-negative bacteria

Author keywords

Chromosomal deletions; Genetic stability; Insertional mutagenesis; Mini transposons; Minimal genome; Synthetic biology

Indexed keywords

PRIMER DNA;

EID: 82355181976     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-61779-412-4_16     Document Type: Article
Times cited : (74)

References (24)
  • 1
    • 77958197159 scopus 로고    scopus 로고
    • Environmental biosafety in the age of Synthetic Biology: Do we really need a radical new approach?
    • de Lorenzo V. (2010) Environmental biosafety in the age of Synthetic Biology: Do we really need a radical new approach? BioEssays 32: 926-931.
    • (2010) BioEssays , vol.32 , pp. 926-931
    • De Lorenzo, V.1
  • 2
    • 77953584054 scopus 로고    scopus 로고
    • Creation of a bacterial cell controlled by a chemically synthesized genome
    • Gibson DG, Glass JI, Lartigue C et al (2010) Creation of a bacterial cell controlled by a chemically synthesized genome. Science 329: 52-56.
    • (2010) Science , vol.329 , pp. 52-56
    • Gibson, D.G.1    Glass, J.I.2    Lartigue, C.3
  • 3
    • 0345504146 scopus 로고    scopus 로고
    • Markerless gene replacement in Escherichia coli stimulated by a double-strand break in the chromosome
    • DOI 10.1093/nar/27.22.4409
    • Posfai G, Kolisnychenko V, Bereczki Z et al (1999) Markerless gene replacement in Escherichia coli stimulated by a double-strand break in the chromosome. Nucleic Acids Res 27: 4409-4415. (Pubitemid 29533182)
    • (1999) Nucleic Acids Research , vol.27 , Issue.22 , pp. 4409-4415
    • Posfai, G.1    Kolisnychenko, V.2    Bereczki, Z.3    Blattner, F.R.4
  • 4
    • 58549097483 scopus 로고    scopus 로고
    • Transposon Tn 5
    • Reznikoff WS. (2008) Transposon Tn 5. Annu Rev Genet 42: 269-286.
    • (2008) Annu Rev Genet , vol.42 , pp. 269-286
    • Reznikoff, W.S.1
  • 5
    • 0025047590 scopus 로고
    • Transposon vectors containing non-antibiotic resistance selection markers for cloning and stable chromosomal insertion of foreign genes in gram-negative bacteria
    • Herrero M, de Lorenzo V, Timmis KN. (1990) Transposon vectors containing non-antibiotic resistance selection markers for cloning and stable chromosomal insertion of foreign genes in Gram-negative bacteria. J Bacteriol 172: 6557-6567. (Pubitemid 20372801)
    • (1990) Journal of Bacteriology , vol.172 , Issue.11 , pp. 6557-6567
    • Herrero, M.1    De Lorenzo, V.2    Timmis, K.N.3
  • 6
    • 0025195680 scopus 로고
    • Mini-Tn5 transposoon derivatives for insertion mutagenesis, promoter probing, and chromosomal insertion of cloned DNA in gram-negative eubacteria
    • de Lorenzo V, Herrero M, Jakubzik U et al (1990) Mini-Tn 5 transposon derivatives for insertion mutagenesis, promoter probing, and chromosomal insertion of cloned DNA in Gram-negative eubacteria. J Bacteriol 172: 6568-6572. (Pubitemid 20372802)
    • (1990) Journal of Bacteriology , vol.172 , Issue.11 , pp. 6568-6572
    • De Lorenzo, V.1    Herrero, M.2    Jakubzik, U.3    Timmis, K.N.4
  • 7
    • 0018224280 scopus 로고
    • Trans-complementation-dependent replication of a low molecular weight origin fragment from plasmid R6K
    • Kolter R, Inuzuka M, Helinski DR. (1978) Trans-complementation-dependent replication of a low molecular weight origin fragment from plasmid R6K. Cell 15: 1199-1208. (Pubitemid 9109680)
    • (1978) Cell , vol.15 , Issue.4 , pp. 1199-1208
    • Kolter, R.1    Inuzuka, M.2    Helsinki, D.R.3
  • 8
    • 79951794467 scopus 로고    scopus 로고
    • PBAM1: An allsynthetic genetic tool for analysis and construction of complex bacterial phenotypes
    • Martínez-García E, Calles B, Arévalo- Rodríguez M et al (2011) pBAM1: an allsynthetic genetic tool for analysis and construction of complex bacterial phenotypes. BMC Microbiol 11:38.
    • (2011) BMC Microbiol , vol.11 , pp. 38
    • Martínez-García, E.1    Calles, B.2    Arévalo- Rodríguez, M.3
  • 9
    • 80053648189 scopus 로고    scopus 로고
    • Engineering multiple genomic deletions in Gram-negative bacteria: Analysis of the multiresistant antibiotic profile of Pseudomonas putida KT2440
    • DOI:10.1111/j.1462-2920.2011.02538.x
    • Martinez-Garcia E, and de Lorenzo V. (2011) Engineering multiple genomic deletions in Gram-negative bacteria: analysis of the multiresistant antibiotic profile of Pseudomonas putida KT2440. Environ Microbiol. DOI:10.1111/j.1462- 2920.2011.02538.x.
    • (2011) Environ Microbiol.
    • Martinez-Garcia, E.1    De Lorenzo, V.2
  • 10
    • 0000113348 scopus 로고
    • Recognition and cleavage site of the intronencoded omega transposase
    • Colleaux L, D'Auriol L, Galibert F et al (1988) Recognition and cleavage site of the intronencoded omega transposase. Proc Natl Acad Sci USA 85: 6022-6026.
    • (1988) Proc Natl Acad Sci USA , vol.85 , pp. 6022-6026
    • Colleaux, L.1    D'auriol, L.2    Galibert, F.3
  • 11
    • 0034730128 scopus 로고    scopus 로고
    • Genetic footprinting with mariner-based transposition in Pseudomonas aeruginosa
    • Wong SM, Mekalanos JJ. (2000) Genetic footprinting with mariner-based transposition in Pseudomonas aeruginosa. Proc Natl Acad Sci USA 97: 10191-10196.
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 10191-10196
    • Wong, S.M.1    Mekalanos, J.J.2
  • 12
    • 0030819591 scopus 로고    scopus 로고
    • Improved broad-host-range RK2 vectors useful for high and low regulated gene expression levels in gram-negative bacteria
    • DOI 10.1006/plas.1997.1294
    • Blatny JM, Brautaset T, Winther-Larsen HC et al (1997) Improved broad-host-range RK2 vectors useful for high and low regulated gene expression levels in Gram-negative bacteria. Plasmid 38: 35-51. (Pubitemid 27381799)
    • (1997) Plasmid , vol.38 , Issue.1 , pp. 35-51
    • Blatny, J.M.1    Brautaset, T.2    Winther-Larsen, H.C.3    Karunakaran, P.4    Valla, S.5
  • 13
    • 0031754332 scopus 로고    scopus 로고
    • Genetic analysis of Escherichia coli biofilm formation: Roles of flagella, motility, chemotaxis and type I pili
    • DOI 10.1046/j.1365-2958.1998.01061.x
    • Pratt LA, Kolter R. (1998) Genetic analysis of Escherichia coli biofilm formation: roles of fl agella, motility, chemotaxis and type I pili. Mol Microbiol 30: 285-293. (Pubitemid 28480180)
    • (1998) Molecular Microbiology , vol.30 , Issue.2 , pp. 285-293
    • Pratt, L.A.1    Kolter, R.2
  • 16
    • 32244448730 scopus 로고    scopus 로고
    • A 10-min method for preparation of highly electrocompetent Pseudomonas aeruginosa cells: Application for DNA fragment transfer between chromosomes and plasmid transformation
    • DOI 10.1016/j.mimet.2005.06.001, PII S0167701205001582
    • Choi KH, Kumar A, Schweizer HP. (2006) A 10-min method for preparation of highly electrocompetent Pseudomonas aeruginosa cells: application for DNA fragment transfer between chromosomes and plasmid transformation. J Microbiol Methods 64: 391-397. (Pubitemid 43212814)
    • (2006) Journal of Microbiological Methods , vol.64 , Issue.3 , pp. 391-397
    • Choi, K.-H.1    Kumar, A.2    Schweizer, H.P.3
  • 17
    • 24644442128 scopus 로고    scopus 로고
    • An improved arbitrary primed PCR method for rapid characterization of transposon insertion sites
    • DOI 10.1016/j.mimet.2005.02.011, PII S0167701205000515
    • Das S, Noe JC, Paik S et al (2005) An improved arbitrary primed PCR method for rapid characterization of transposon insertion sites. J Microbiol Methods 63: 89-94. (Pubitemid 41266889)
    • (2005) Journal of Microbiological Methods , vol.63 , Issue.1 , pp. 89-94
    • Das, S.1    Noe, J.C.2    Paik, S.3    Kitten, T.4
  • 18
    • 0024556150 scopus 로고
    • Engineering hybrid genes without the use of restriction enzymes: Gene splicing by overlap extension
    • DOI 10.1016/0378-1119(89)90359-4
    • Horton RM, Hunt HD, Ho SN et al (1989) Engineering hybrid genes without the use of restriction enzymes: gene splicing by overlap extension. Gene 77: 61-68. (Pubitemid 19125654)
    • (1989) Gene , vol.77 , Issue.1 , pp. 61-68
    • Horton, R.M.1    Hunt, H.D.2    Ho, S.N.3    Pullen, J.K.4    Pease, L.R.5
  • 20
    • 0028358260 scopus 로고
    • Analysis and construction of stable phenotypes in Gram-negative bacteria with Tn 5 - And Tn 10 -derived minitransposons
    • de Lorenzo V, Timmis KN (1994) Analysis and construction of stable phenotypes in Gram-negative bacteria with Tn 5 - and Tn 10 -derived minitransposons. Methods Enzymol 235: 386-405.
    • (1994) Methods Enzymol , vol.235 , pp. 386-405
    • De Lorenzo, V.1    Timmis, K.N.2
  • 21
    • 0020959710 scopus 로고
    • Studies on transformation of Escherichia coli with plasmids
    • Hanahan D. (1983) Studies on transformation of Escherichia coli with plasmids. J Mol Biol 166: 557-580. (Pubitemid 13027898)
    • (1983) Journal of Molecular Biology , vol.166 , Issue.4 , pp. 557-580
    • Hanahan, D.1
  • 24
    • 0029063837 scopus 로고
    • Activation of the transcriptional regulator XylR of Pseudomonas putida by release of repression between functional domains
    • Fernandez S, de Lorenzo V, Perez-Martin J. (1995) Activation of the transcriptional regulator XylR of Pseudomonas putida by release of repression between functional domains. Mol Microbiol 16: 205-213.
    • (1995) Mol Microbiol , vol.16 , pp. 205-213
    • Fernandez, S.1    De Lorenzo, V.2    Perez-Martin, J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.