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Volumn 106, Issue 19, 2009, Pages 7997-8002

Genetic reductionist approach for dissecting individual roles of GGDEF proteins within the c-di-GMP signaling network in Salmonella

Author keywords

Biofilm formation; Salmonella virulence; Signal transduction system cellulose; STM4551

Indexed keywords

BACTERIAL PROTEIN; CYCLIC DINUCLEOTIDE, 3' 5' CYCLIC DIGUANYLIC ACID; MESSENGER RNA; UNCLASSIFIED DRUG;

EID: 66049142620     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.0812573106     Document Type: Article
Times cited : (84)

References (45)
  • 1
    • 35848951876 scopus 로고    scopus 로고
    • Roles of cyclic diguanylate in the regulation of bacterial pathogenesis
    • DOI 10.1146/annurev.micro.61.080706.093426
    • Tamayo R, Pratt JT, Camilli A (2007) Roles of cyclic diguanylate in the regulation of bacterial pathogenesis. Annual Review of Microbiology 61:131-148. (Pubitemid 350058203)
    • (2007) Annual Review of Microbiology , vol.61 , pp. 131-148
    • Tamayo, R.1    Pratt, J.T.2    Camilli, A.3
  • 2
    • 22644438480 scopus 로고    scopus 로고
    • C-di-GMP: The dawning of a novel bacterial signalling system
    • DOI 10.1111/j.1365-2958.2005.04697.x
    • Romling U, Gomelsky M, Galperin MY (2005) C-di-GMP: The dawning of a novel bacterial signalling system. Mol Microbiol 57:629-639. (Pubitemid 41025947)
    • (2005) Molecular Microbiology , vol.57 , Issue.3 , pp. 629-639
    • Romling, U.1    Gomelsky, M.2    Galperin, M.Y.3
  • 3
    • 33845400857 scopus 로고    scopus 로고
    • Cyclic di-GMP signaling in bacteria: Recent advances and new puzzles
    • Ryan RP, Fouhy Y, Lucey JF, Dow JM (2006) Cyclic di-GMP signaling in bacteria: Recent advances and new puzzles. J Bacteriol 188:8327-8334.
    • (2006) J Bacteriol , vol.188 , pp. 8327-8334
    • Ryan, R.P.1    Fouhy, Y.2    Lucey, J.F.3    Dow, J.M.4
  • 5
    • 33845403359 scopus 로고    scopus 로고
    • Mechanisms of cyclic-di-GMP signaling in bacteria
    • Jenal U, Malone J (2006) Mechanisms of cyclic-di-GMP signaling in bacteria. Annu Rev Genet 40:385-407.
    • (2006) Annu Rev Genet , vol.40 , pp. 385-407
    • Jenal, U.1    Malone, J.2
  • 6
    • 4444250897 scopus 로고    scopus 로고
    • Cyclic di-GMP as a bacterial second messenger
    • D'Argenio DA, Miller SI (2004) Cyclic di-GMP as a bacterial second messenger. Microbiology 150:2497-2502. (Pubitemid 39173255)
    • (2004) Microbiology , vol.150 , Issue.8 , pp. 2497-2502
    • D'Argenio, D.A.1    Miller, S.I.2
  • 7
    • 1842451699 scopus 로고    scopus 로고
    • Cell cycle-dependent dynamic localization of a bacterial response regulator with a novel di-guanylate cyclase output domain
    • DOI 10.1101/gad.289504
    • Paul R, et al. (2004) Cell cycle-dependent dynamic localization of a bacterial response regulator with a novel di-guanylate cyclase output domain. Genes Dev 18:715-727. (Pubitemid 38489938)
    • (2004) Genes and Development , vol.18 , Issue.6 , pp. 715-727
    • Paul, R.1    Weiser, S.2    Amiot, N.C.3    Chan, C.4    Schirmer, T.5    Giese, B.6    Jenal, U.7
  • 9
    • 14244254898 scopus 로고    scopus 로고
    • Cyclic diguanylate is a ubiquitous signaling molecule in bacteria: Insights into biochemistry of the GGDEF protein domain
    • DOI 10.1128/JB.187.5.1792-1798.2005
    • Ryjenkov DA, Tarutina M, Moskvin OV, Gomelsky M (2005) Cyclic diguanylate is a ubiquitous signaling molecule in bacteria: Insights into biochemistry of the GGDEF protein domain. J Bacteriol 187:1792-1798. (Pubitemid 40289381)
    • (2005) Journal of Bacteriology , vol.187 , Issue.5 , pp. 1792-1798
    • Ryjenkov, D.A.1    Tarutina, M.2    Moskvin, O.V.3    Gomelsky, M.4
  • 10
    • 33646249963 scopus 로고    scopus 로고
    • Cell-cell signaling in Xanthomonas campestris involves an HD-GYP domain protein that functions in cyclic di-GMP turnover
    • Ryan RP, et al. (2006) Cell-cell signaling in Xanthomonas campestris involves an HD-GYP domain protein that functions in cyclic di-GMP turnover. Proc Natl Acad Sci USA 103:6712-6717.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 6712-6717
    • Ryan, R.P.1
  • 11
    • 21844451590 scopus 로고    scopus 로고
    • The ubiquitous protein domain EAL is a cyclic diguanylate-specific phosphodiesterase: Enzymatically active and inactive EAL domains
    • DOI 10.1128/JB.187.14.4774-4781.2005
    • Schmidt AJ, Ryjenkov DA, Gomelsky M (2005) The ubiquitous protein domain EAL is a cyclic diguanylate-specific phosphodiesterase: Enzymatically active and inactive EAL domains. J Bacteriol 187:4774-4781. (Pubitemid 40962195)
    • (2005) Journal of Bacteriology , vol.187 , Issue.14 , pp. 4774-4781
    • Schmidt, A.J.1    Ryjenkov, D.A.2    Gomelsky, M.3
  • 12
    • 4344688129 scopus 로고    scopus 로고
    • GGDEF and EAL domains inversely regulate cyclic di-GMP levels and transition from sessibility to motility
    • DOI 10.1111/j.1365-2958.2004.04206.x
    • Simm R, Morr M, Kader A, Nimtz M, Romling U (2004) GGDEF and EAL domains inversely regulate cyclic di-GMP levels and transition from sessility to motility. Mol Microbiol 53:1123-1134. (Pubitemid 39120434)
    • (2004) Molecular Microbiology , vol.53 , Issue.4 , pp. 1123-1134
    • Simm, R.1    Morr, M.2    Kader, A.3    Nimtz, M.4    Romling, U.5
  • 13
    • 25144489145 scopus 로고    scopus 로고
    • The EAL domain protein VieA is a cyclic diguanylate phosphodiesterase
    • DOI 10.1074/jbc.M506500200
    • Tamayo R, Tischler AD, Camilli A (2005) The EAL domain protein VieA is a cyclic diguanylate phosphodiesterase. J Biol Chem 280:33324-33330. (Pubitemid 41397129)
    • (2005) Journal of Biological Chemistry , vol.280 , Issue.39 , pp. 33324-33330
    • Tamayo, R.1    Tischler, A.D.2    Camilli, A.3
  • 16
    • 33750044865 scopus 로고    scopus 로고
    • The PilZ domain is a receptor for the second messenger c-di-GMP: The PilZ domain protein YcgR controls motility in enterobacteria
    • DOI 10.1074/jbc.C600179200
    • Ryjenkov DA, Simm R, Romling U, Gomelsky M (2006) The PilZ domain is a receptor for the second messenger c-di-GMP: The PilZ domain protein YcgR controls motility in enterobacteria. J Biol Chem 281:30310-30314. (Pubitemid 44582083)
    • (2006) Journal of Biological Chemistry , vol.281 , Issue.41 , pp. 30310-30314
    • Ryjenkov, D.A.1    Simm, R.2    Romling, U.3    Gomelsky, M.4
  • 18
    • 34250358327 scopus 로고    scopus 로고
    • PilZ domain proteins bind cyclic diguanylate and regulate diverse processes in Vibrio cholerae
    • DOI 10.1074/jbc.M611593200
    • Pratt JT, Tamayo R, Tischler AD, Camilli A (2007) PilZ domain proteins bind cyclic diguanylate and regulate diverse processes in Vibrio cholerae. J Biol Chem 282:12860-12870. (Pubitemid 47100636)
    • (2007) Journal of Biological Chemistry , vol.282 , Issue.17 , pp. 12860-12870
    • Pratt, J.T.1    Tamayo, R.2    Tischler, A.D.3    Camilli, A.4
  • 19
    • 30344469912 scopus 로고    scopus 로고
    • PilZ domain is part of the bacterial c-di-GMP binding protein
    • DOI 10.1093/bioinformatics/bti739
    • Amikam D, Galperin MY (2006) PilZ domain is part of the bacterial c-di-GMP binding protein. Bioinformatics (Oxford, England) 22:3-6. (Pubitemid 43057001)
    • (2006) Bioinformatics , vol.22 , Issue.1 , pp. 3-6
    • Amikam, D.1    Galperin, M.Y.2
  • 20
    • 0030734277 scopus 로고    scopus 로고
    • C-di-GMP-binding protein, a new factor regulating cellulose synthesis in Acetobacter xylinum
    • Weinhouse H, et al. (1997) c-di-GMP-binding protein, a new factor regulating cellulose synthesis in Acetobacter xylinum. FEBS Lett 416:207-211.
    • (1997) FEBS Lett , vol.416 , pp. 207-211
    • Weinhouse, H.1
  • 22
    • 34547682212 scopus 로고    scopus 로고
    • The second messenger bis-(3′-5′)-cyclic-GMP and its PilZ domain-containing receptor Alg44 are required for alginate biosynthesis in Pseudomonas aeruginosa
    • DOI 10.1111/j.1365-2958.2007.05817.x
    • Merighi M, Lee VT, Hyodo M, Hayakawa Y, Lory S (2007) The second messenger bis-(3′-5′)-cyclic-GMP and its PilZ domain-containing receptor Alg44 are required for alginate biosynthesis in Pseudomonas aeruginosa. Mol Microbiol 65:876-895. (Pubitemid 47221070)
    • (2007) Molecular Microbiology , vol.65 , Issue.4 , pp. 876-895
    • Merighi, M.1    Lee, V.T.2    Hyodo, M.3    Hayakawa, Y.4    Lory, S.5
  • 24
    • 47249089614 scopus 로고    scopus 로고
    • Identification of FleQ from Pseudomonas aeruginosa as a c-di-GMP-responsive transcription factor
    • Hickman JW, Harwood CS (2008) Identification of FleQ from Pseudomonas aeruginosa as a c-di-GMP-responsive transcription factor. Mol Microbiol 69:376-389.
    • (2008) Mol Microbiol , vol.69 , pp. 376-389
    • Hickman, J.W.1    Harwood, C.S.2
  • 25
    • 47749152941 scopus 로고    scopus 로고
    • Riboswitches in eubacteria sense the second messenger cyclic di-GMP
    • Sudarsan N, et al. (2008) Riboswitches in eubacteria sense the second messenger cyclic di-GMP. Science 321:411-413.
    • (2008) Science , vol.321 , pp. 411-413
    • Sudarsan, N.1
  • 26
    • 0035845587 scopus 로고    scopus 로고
    • Novel domains of the prokaryotic two-component signal transduction systems
    • DOI 10.1016/S0378-1097(01)00326-3, PII S0378109701003263
    • Galperin MY, Nikolskaya AN, Koonin EV (2001) Novel domains of the prokaryotic two-component signal transduction systems. FEMS Microbiol Lett 203:11-21. (Pubitemid 32830987)
    • (2001) FEMS Microbiology Letters , vol.203 , Issue.1 , pp. 11-21
    • Galperin, M.Y.1    Nikolskaya, A.N.2    Koonin, E.V.3
  • 27
    • 33846847846 scopus 로고    scopus 로고
    • C-di-GMP-mediated regulation of virulence and biofilm formation
    • DOI 10.1016/j.mib.2006.12.006, PII S1369527406001925
    • Cotter PA, Stibitz S (2007) c-di-GMP-mediated regulation of virulence and biofilm formation. Current Opinion in Microbiology 10:17-23. (Pubitemid 46216876)
    • (2007) Current Opinion in Microbiology , vol.10 , Issue.1 , pp. 17-23
    • Cotter, P.A.1    Stibitz, S.2
  • 29
    • 0035065254 scopus 로고    scopus 로고
    • The multicellular morphotypes of Salmonella typhimurium and Escherichia coli produce cellulose as the second component of the extracellular matrix
    • DOI 10.1046/j.1365-2958.2001.02337.x
    • Zogaj X, Nimtz M, Rohde M, Bokranz W, Romling U (2001) The multicellular morphotypes of Salmonella typhimurium and Escherichia coli produce cellulose as the second component of the extracellular matrix. Mol Microbiol 39:1452-1463. (Pubitemid 32269743)
    • (2001) Molecular Microbiology , vol.39 , Issue.6 , pp. 1452-1463
    • Zogaj, X.1    Nimtz, M.2    Rohde, M.3    Bokranz, W.4    Romling, U.5
  • 31
    • 33645819810 scopus 로고    scopus 로고
    • Hierarchical involvement of various GGDEF domain proteins in rdar morphotype development of Salmonella enterica serovar Typhimurium
    • Kader A, Simm R, Gerstel U, Morr M, Romling U (2006) Hierarchical involvement of various GGDEF domain proteins in rdar morphotype development of Salmonella enterica serovar Typhimurium. Mol Microbiol 60:602-616.
    • (2006) Mol Microbiol , vol.60 , pp. 602-616
    • Kader, A.1    Simm, R.2    Gerstel, U.3    Morr, M.4    Romling, U.5
  • 32
    • 25144497412 scopus 로고    scopus 로고
    • Phenotypic convergence mediated by GGDEF-domain-containing proteins
    • DOI 10.1128/JB.187.19.6816-6823.2005
    • Simm R, Fetherston JD, Kader A, Romling U, Perry RD (2005) Phenotypic convergence mediated by GGDEF-domain-containing proteins. J Bacteriol 187:6816-6823. (Pubitemid 41356255)
    • (2005) Journal of Bacteriology , vol.187 , Issue.19 , pp. 6816-6823
    • Simm, R.1    Fetherston, J.D.2    Kader, A.3    Romling, U.4    Perry, R.D.5
  • 33
    • 33748705968 scopus 로고    scopus 로고
    • Identification of a novel regulatory protein (CsrD) that targets the global regulatory RNAs CsrB and CsrC for degradation by RNase e
    • DOI 10.1101/gad.1461606
    • Suzuki K, Babitzke P, Kushner SR, Romeo T (2006) Identification of a novel regulatory protein (CsrD) that targets the global regulatory RNAs CsrB and CsrC for degradation by RNase E. Genes Dev 20:2605-2617. (Pubitemid 44396844)
    • (2006) Genes and Development , vol.20 , Issue.18 , pp. 2605-2617
    • Suzuki, K.1    Babitzke, P.2    Kushner, S.R.3    Romeo, T.4
  • 34
    • 48149105151 scopus 로고    scopus 로고
    • A staphylococcal GGDEF domain protein regulates biofilm formation independently of cyclic dimeric GMP
    • Holland LM, et al. (2008) A staphylococcal GGDEF domain protein regulates biofilm formation independently of cyclic dimeric GMP. J Bacteriol 190:5178-5189.
    • (2008) J Bacteriol , vol.190 , pp. 5178-5189
    • Holland, L.M.1
  • 35
    • 38649102818 scopus 로고    scopus 로고
    • Vibrio parahaemolyticus ScrC modulates cyclic dimeric GMP regulation of gene expression relevant to growth on surfaces
    • Ferreira RB, Antunes LC, Greenberg EP, McCarter LL (2008) Vibrio parahaemolyticus ScrC modulates cyclic dimeric GMP regulation of gene expression relevant to growth on surfaces. J Bacteriol 190:851-860.
    • (2008) J Bacteriol , vol.190 , pp. 851-860
    • Ferreira, R.B.1    Antunes, L.C.2    Greenberg, E.P.3    McCarter, L.L.4
  • 36
    • 36549021125 scopus 로고    scopus 로고
    • BifA, a cyclic-di-GMP phosphodiesterase, inversely regulates biofilm formation and swarming motility by Pseudomonas aeruginosa PA14
    • DOI 10.1128/JB.00586-07
    • Kuchma SL, et al. (2007) BifA, a cyclic-Di-GMP phosphodiesterase, inversely regulates biofilm formation and swarming motility by Pseudomonas aeruginosa PA14. J Bacteriol 189:8165-8178. (Pubitemid 350178928)
    • (2007) Journal of Bacteriology , vol.189 , Issue.22 , pp. 8165-8178
    • Kuchma, S.L.1    Brothers, K.M.2    Merritt, J.H.3    Liberati, N.T.4    Ausubel, F.M.5    O'Toole, G.A.6
  • 37
    • 36549037688 scopus 로고    scopus 로고
    • SadC reciprocally influences biofilm formation and swarming motility via modulation of exopolysaccharide production and flagellar function
    • DOI 10.1128/JB.00585-07
    • Merritt JH, Brothers KM, Kuchma SL, O'Toole GA (2007) SadC reciprocally influences biofilm formation and swarming motility via modulation of exopolysaccharide production and flagellar function. J Bacteriol 189:8154-8164. (Pubitemid 350178927)
    • (2007) Journal of Bacteriology , vol.189 , Issue.22 , pp. 8154-8164
    • Merritt, J.H.1    Brothers, K.M.2    Kuchma, S.L.3    O'Toole, G.A.4
  • 38
    • 0025602887 scopus 로고
    • Transposition burst of the ISH27 insertion element family in Halobacterium halobium
    • Pfeifer F, Blaseio U (1990) Transposition burst of the ISH27 insertion element family in Halobacterium halobium. Nucleic Acids Res 18:6921-6925.
    • (1990) Nucleic Acids Res , vol.18 , pp. 6921-6925
    • Pfeifer, F.1    Blaseio, U.2
  • 39
    • 0031932327 scopus 로고    scopus 로고
    • Curli fibers are highly conserved between Salmonella typhimurium and Escherichia coli with respect to operon structure and regulation
    • Romling U, Bian Z, Hammar M, Sierralta WD, Normark S (1998) Curli fibers are highly conserved between Salmonella typhimurium and Escherichia coli with respect to operon structure and regulation. J Bacteriol 180:722-731. (Pubitemid 28100559)
    • (1998) Journal of Bacteriology , vol.180 , Issue.3 , pp. 722-731
    • Romling, U.1    Bian, Z.2    Hammar, M.3    Sierralta, W.D.4    Normark, S.5
  • 40
    • 33646270617 scopus 로고    scopus 로고
    • Thin aggregative fimbriae and cellulose enhance long-term survival and persistence of Salmonella
    • White AP, Gibson DL, Kim W, Kay WW, Surette MG (2006) Thin aggregative fimbriae and cellulose enhance long-term survival and persistence of Salmonella. J Bacteriol 188:3219-3227.
    • (2006) J Bacteriol , vol.188 , pp. 3219-3227
    • White, A.P.1    Gibson, D.L.2    Kim, W.3    Kay, W.W.4    Surette, M.G.5
  • 41
    • 28244447376 scopus 로고    scopus 로고
    • BapA, a large secreted protein required for biofilm formation and host colonization of Salmonella enterica serovar Enteritidis
    • DOI 10.1111/j.1365-2958.2005.04907.x
    • Latasa C, et al. (2005) BapA, a large secreted protein required for biofilm formation and host colonization of Salmonella enterica serovar Enteritidis. Mol Microbiol 58:1322-1339. (Pubitemid 41705412)
    • (2005) Molecular Microbiology , vol.58 , Issue.5 , pp. 1322-1339
    • Latasa, C.1    Roux, A.2    Toledo-Arana, A.3    Ghigo, J.-M.4    Gamazo, C.5    Penades, J.R.6    Lasa, I.7
  • 42
    • 0028214086 scopus 로고
    • Salmonella typhimurium initiates murine infection by penetrating and destroying the specialized epithelial M cells of the Peyer's patches
    • DOI 10.1084/jem.180.1.15
    • Jones BD, Ghori N, Falkow S (1994) Salmonella typhimurium initiates murine infection by penetrating and destroying the specialized epithelial M cells of the Peyer's patches. J Exp Med 180:15-23. (Pubitemid 24181051)
    • (1994) Journal of Experimental Medicine , vol.180 , Issue.1 , pp. 15-23
    • Jones, B.D.1    Ghori, N.2    Falkow, S.3
  • 43
    • 0034668869 scopus 로고    scopus 로고
    • A rapid method for efficient gene replacement in the filamentous fungus Aspergillus nidulans
    • Chaveroche MK, Ghigo JM, d'Enfert C (2000) A rapid method for efficient gene replacement in the filamentous fungus Aspergillus nidulans. Nucleic Acids Res 28:E97.
    • (2000) Nucleic Acids Res , vol.28
    • Chaveroche, M.K.1    Ghigo, J.M.2    D'Enfert, C.3
  • 45
    • 0033028404 scopus 로고    scopus 로고
    • Cyclic oligoribonucleotides (RNA) by solid-phase synthesis
    • Micura R (1999) Cyclic oligoribonucleotides (RNA) by solid-phase synthesis. Chemistry-A European Journal 5:2077-2082. (Pubitemid 129502696)
    • (1999) Chemistry - a European Journal , vol.5 , Issue.7 , pp. 2077-2082
    • Micura, R.1


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