-
1
-
-
84874914744
-
Cyclic di-GMP: The first 25 years of a universal bacterial second messenger
-
Römling U, Galperin MY, Gomelsky M (2013) Cyclic di-GMP: The first 25 years of a universal bacterial second messenger. Microbiol Mol Biol Rev 77(1):1-52.
-
(2013)
Microbiol Mol Biol Rev
, vol.77
, Issue.1
, pp. 1-52
-
-
Römling, U.1
Galperin, M.Y.2
Gomelsky, M.3
-
2
-
-
0031783181
-
Three cdg operons control cellular turnover of cyclic di-GMP in Acetobacter xylinum: Genetic organization and occurrence of conserved domains in isoenzymes
-
Tal R, et al. (1998) Three cdg operons control cellular turnover of cyclic di-GMP in Acetobacter xylinum: Genetic organization and occurrence of conserved domains in isoenzymes. J Bacteriol 180(17):4416-4425.
-
(1998)
J Bacteriol
, vol.180
, Issue.17
, pp. 4416-4425
-
-
Tal, R.1
-
3
-
-
14244254898
-
Cyclic diguanylate is a ubiquitous signaling molecule in bacteria: Insights into biochemistry of the GGDEF protein domain
-
Ryjenkov DA, Tarutina M, Moskvin OV, Gomelsky M (2005) Cyclic diguanylate is a ubiquitous signaling molecule in bacteria: Insights into biochemistry of the GGDEF protein domain. J Bacteriol 187(5):1792-1798.
-
(2005)
J Bacteriol
, vol.187
, Issue.5
, pp. 1792-1798
-
-
Ryjenkov, D.A.1
Tarutina, M.2
Moskvin, O.V.3
Gomelsky, M.4
-
4
-
-
35848951876
-
Roles of cyclic diguanylate in the regulation of bacterial pathogenesis
-
Tamayo R, Pratt JT, Camilli A (2007) Roles of cyclic diguanylate in the regulation of bacterial pathogenesis. Annu Rev Microbiol 61:131-148.
-
(2007)
Annu Rev Microbiol
, vol.61
, pp. 131-148
-
-
Tamayo, R.1
Pratt, J.T.2
Camilli, A.3
-
5
-
-
63049137897
-
Principles of c-di-GMP signalling in bacteria
-
Hengge R (2009) Principles of c-di-GMP signalling in bacteria. Nat Rev Microbiol 7(4):263-273.
-
(2009)
Nat Rev Microbiol
, vol.7
, Issue.4
, pp. 263-273
-
-
Hengge, R.1
-
6
-
-
67651215871
-
Prevailing concepts of c-di-GMP signaling
-
Römling U, Simm R (2009) Prevailing concepts of c-di-GMP signaling. Contrib Microbiol 16:161-181.
-
(2009)
Contrib Microbiol
, vol.16
, pp. 161-181
-
-
Römling, U.1
Simm, R.2
-
7
-
-
84862527194
-
Sensing the messenger: The diverse ways that bacteria signal through c-di-GMP
-
Krasteva PV, Giglio KM, Sondermann H (2012) Sensing the messenger: The diverse ways that bacteria signal through c-di-GMP. Protein Sci 21(7):929-948.
-
(2012)
Protein Sci
, vol.21
, Issue.7
, pp. 929-948
-
-
Krasteva, P.V.1
Giglio, K.M.2
Sondermann, H.3
-
8
-
-
4344688129
-
GGDEF and EAL domains inversely regulate cyclic di-GMP levels and transition from sessility to motility
-
Simm R, Morr M, Kader A, Nimtz M, Römling U (2004) GGDEF and EAL domains inversely regulate cyclic di-GMP levels and transition from sessility to motility. Mol Microbiol 53(4):1123-1134.
-
(2004)
Mol Microbiol
, vol.53
, Issue.4
, pp. 1123-1134
-
-
Simm, R.1
Morr, M.2
Kader, A.3
Nimtz, M.4
Römling, U.5
-
9
-
-
25144489145
-
The EAL domain protein VieA is a cyclic diguanylate phosphodiesterase
-
Tamayo R, Tischler AD, Camilli A (2005) The EAL domain protein VieA is a cyclic diguanylate phosphodiesterase. J Biol Chem 280(39):33324-33330.
-
(2005)
J Biol Chem
, vol.280
, Issue.39
, pp. 33324-33330
-
-
Tamayo, R.1
Tischler, A.D.2
Camilli, A.3
-
10
-
-
21844451590
-
The ubiquitous protein domain EAL is a cyclic diguanylate-specific phosphodiesterase: Enzymatically active and inactive EAL domains
-
Schmidt AJ, Ryjenkov DA, Gomelsky M (2005) The ubiquitous protein domain EAL is a cyclic diguanylate-specific phosphodiesterase: Enzymatically active and inactive EAL domains. J Bacteriol 187(14):4774-4781.
-
(2005)
J Bacteriol
, vol.187
, Issue.14
, pp. 4774-4781
-
-
Schmidt, A.J.1
Ryjenkov, D.A.2
Gomelsky, M.3
-
11
-
-
33646249963
-
Cell-cell signaling in Xanthomonas campestris involves an HDGYP domain protein that functions in cyclic di-GMP turnover
-
Ryan RP, et al. (2006) Cell-cell signaling in Xanthomonas campestris involves an HDGYP domain protein that functions in cyclic di-GMP turnover. Proc Natl Acad Sci USA 103(17):6712-6717.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, Issue.17
, pp. 6712-6717
-
-
Ryan, R.P.1
-
12
-
-
0037346498
-
Role of the GGDEF regulator PleD in polar development of Caulobacter crescentus
-
Aldridge P, Paul R, Goymer P, Rainey P, Jenal U (2003) Role of the GGDEF regulator PleD in polar development of Caulobacter crescentus. Mol Microbiol 47(6):1695-1708.
-
(2003)
Mol Microbiol
, vol.47
, Issue.6
, pp. 1695-1708
-
-
Aldridge, P.1
Paul, R.2
Goymer, P.3
Rainey, P.4
Jenal, U.5
-
13
-
-
20444385050
-
The phosphodiesterase activity of the HmsP EAL domain is required for negative regulation of biofilm formation in Yersinia pestis
-
Bobrov AG, Kirillina O, Perry RD (2005) The phosphodiesterase activity of the HmsP EAL domain is required for negative regulation of biofilm formation in Yersinia pestis. FEMS Microbiol Lett 247(2):123-130.
-
(2005)
FEMS Microbiol Lett
, vol.247
, Issue.2
, pp. 123-130
-
-
Bobrov, A.G.1
Kirillina, O.2
Perry, R.D.3
-
14
-
-
3843069972
-
Cyclic diguanylate (c-di-GMP) regulates Vibrio cholerae biofilm formation
-
Tischler AD, Camilli A (2004) Cyclic diguanylate (c-di-GMP) regulates Vibrio cholerae biofilm formation. Mol Microbiol 53(3):857-869.
-
(2004)
Mol Microbiol
, vol.53
, Issue.3
, pp. 857-869
-
-
Tischler, A.D.1
Camilli, A.2
-
15
-
-
25144497412
-
Phenotypic convergence mediated by GGDEF-domain-containing proteins
-
Simm R, Fetherston JD, Kader A, Römling U, Perry RD (2005) Phenotypic convergence mediated by GGDEF-domain-containing proteins. J Bacteriol 187(19):6816-6823.
-
(2005)
J Bacteriol
, vol.187
, Issue.19
, pp. 6816-6823
-
-
Simm, R.1
Fetherston, J.D.2
Kader, A.3
Römling, U.4
Perry, R.D.5
-
16
-
-
70349274104
-
Structural and mechanistic determinants of c-di-GMP signalling
-
Schirmer T, Jenal U (2009) Structural and mechanistic determinants of c-di-GMP signalling. Nat Rev Microbiol 7(10):724-735.
-
(2009)
Nat Rev Microbiol
, vol.7
, Issue.10
, pp. 724-735
-
-
Schirmer, T.1
Jenal, U.2
-
17
-
-
10344238965
-
Structural basis of activity and allosteric control of diguanylate cyclase
-
Chan C, et al. (2004) Structural basis of activity and allosteric control of diguanylate cyclase. Proc Natl Acad Sci USA 101(49):17084-17089.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, Issue.49
, pp. 17084-17089
-
-
Chan, C.1
-
18
-
-
70349783823
-
Determinants for the activation and autoinhibition of the diguanylate cyclase response regulator WspR
-
De N, Navarro MV, Raghavan RV, Sondermann H (2009) Determinants for the activation and autoinhibition of the diguanylate cyclase response regulator WspR. J Mol Biol 393(3):619-633.
-
(2009)
J Mol Biol
, vol.393
, Issue.3
, pp. 619-633
-
-
De, N.1
Navarro, M.V.2
Raghavan, R.V.3
Sondermann, H.4
-
19
-
-
82455163827
-
The structure and inhibition of a GGDEF diguanylate cyclase complexed with (c-di-GMP) (2) at the active site
-
Yang CY, et al. (2011) The structure and inhibition of a GGDEF diguanylate cyclase complexed with (c-di-GMP) (2) at the active site. Acta Crystallogr D Biol Crystallogr 67(Pt 12):997-1008.
-
(2011)
Acta Crystallogr D Biol Crystallogr
, vol.67
, pp. 997-1008
-
-
Yang, C.Y.1
-
20
-
-
77956357900
-
Escherichia coli K-12 YfgF is an anaerobic cyclic di-GMP phosphodiesterase with roles in cell surface remodelling and the oxidative stress response
-
Lacey MM, Partridge JD, Green J (2010) Escherichia coli K-12 YfgF is an anaerobic cyclic di-GMP phosphodiesterase with roles in cell surface remodelling and the oxidative stress response. Microbiology 156(Pt 9):2873-2886.
-
(2010)
Microbiology
, vol.156
, pp. 2873-2886
-
-
Lacey, M.M.1
Partridge, J.D.2
Green, J.3
-
21
-
-
84884194723
-
C-di-GMP hydrolysis by Pseudomonas aeruginosa HD-GYP phosphodiesterases: Analysis of the reaction mechanism and novel roles for pGpG
-
Stelitano V, et al. (2013) C-di-GMP hydrolysis by Pseudomonas aeruginosa HD-GYP phosphodiesterases: Analysis of the reaction mechanism and novel roles for pGpG. PLoS One 8(9):e74920.
-
(2013)
PLoS One
, vol.8
, Issue.9
, pp. e74920
-
-
Stelitano, V.1
-
22
-
-
84878454210
-
Systematic identification of conserved bacterial c-di-AMP receptor proteins
-
Corrigan RM, et al. (2013) Systematic identification of conserved bacterial c-di-AMP receptor proteins. Proc Natl Acad Sci USA 110(22):9084-9089.
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, Issue.22
, pp. 9084-9089
-
-
Corrigan, R.M.1
-
23
-
-
80053091424
-
Differential radial capillary action of ligand assay for high-throughput detection of protein-metabolite interactions
-
Roelofs KG, Wang J, Sintim HO, Lee VT (2011) Differential radial capillary action of ligand assay for high-throughput detection of protein-metabolite interactions. Proc Natl Acad Sci USA 108(37):15528-15533.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, Issue.37
, pp. 15528-15533
-
-
Roelofs, K.G.1
Wang, J.2
Sintim, H.O.3
Lee, V.T.4
-
24
-
-
41949140793
-
Production and sequence validation of a complete full length ORF collection for the pathogenic bacterium Vibrio cholerae
-
Rolfs A, et al. (2008) Production and sequence validation of a complete full length ORF collection for the pathogenic bacterium Vibrio cholerae. Proc Natl Acad Sci USA 105(11):4364-4369.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.11
, pp. 4364-4369
-
-
Rolfs, A.1
-
25
-
-
0031924593
-
Oligoribonuclease is encoded by a highly conserved gene in the 3'-5' exonuclease superfamily
-
Zhang X, Zhu L, Deutscher MP (1998) Oligoribonuclease is encoded by a highly conserved gene in the 3'-5' exonuclease superfamily. J Bacteriol 180(10):2779-2781.
-
(1998)
J Bacteriol
, vol.180
, Issue.10
, pp. 2779-2781
-
-
Zhang, X.1
Zhu, L.2
Deutscher, M.P.3
-
26
-
-
33644504829
-
An ordered, nonredundant library of Pseudomonas aeruginosa strain PA14 transposon insertion mutants
-
Liberati NT, et al. (2006) An ordered, nonredundant library of Pseudomonas aeruginosa strain PA14 transposon insertion mutants. Proc Natl Acad Sci USA 103(8):2833-2838.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, Issue.8
, pp. 2833-2838
-
-
Liberati, N.T.1
-
27
-
-
47249089614
-
Identification of FleQ from Pseudomonas aeruginosa as a c-di-GMP-responsive transcription factor
-
Hickman JW, Harwood CS (2008) Identification of FleQ from Pseudomonas aeruginosa as a c-di-GMP-responsive transcription factor. Mol Microbiol 69(2):376-389.
-
(2008)
Mol Microbiol
, vol.69
, Issue.2
, pp. 376-389
-
-
Hickman, J.W.1
Harwood, C.S.2
-
28
-
-
26444582915
-
A chemosensory system that regulates biofilm formation through modulation of cyclic diguanylate levels
-
Hickman JW, Tifrea DF, Harwood CS (2005) A chemosensory system that regulates biofilm formation through modulation of cyclic diguanylate levels. Proc Natl Acad Sci USA 102(40):14422-14427.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, Issue.40
, pp. 14422-14427
-
-
Hickman, J.W.1
Tifrea, D.F.2
Harwood, C.S.3
-
29
-
-
67650863623
-
Connecting quorum sensing, c-di-GMP, pel polysaccharide, and biofilm formation in Pseudomonas aeruginosa through tyrosine phosphatase TpbA (PA3885)
-
Ueda A, Wood TK (2009) Connecting quorum sensing, c-di-GMP, pel polysaccharide, and biofilm formation in Pseudomonas aeruginosa through tyrosine phosphatase TpbA (PA3885). PLoS Pathog 5(6):e1000483.
-
(2009)
PLoS Pathog
, vol.5
, Issue.6
, pp. e1000483
-
-
Ueda, A.1
Wood, T.K.2
-
30
-
-
34548303826
-
A cyclic-di-GMP receptor required for bacterial exopolysaccharide production
-
Lee VT, et al. (2007) A cyclic-di-GMP receptor required for bacterial exopolysaccharide production. Mol Microbiol 65(6):1474-1484.
-
(2007)
Mol Microbiol
, vol.65
, Issue.6
, pp. 1474-1484
-
-
Lee, V.T.1
-
31
-
-
84871416913
-
Crystal structure of an EAL domain in complex with reaction product 5'-pGpG
-
Robert-Paganin J, Nonin-Lecomte S, Réty S (2012) Crystal structure of an EAL domain in complex with reaction product 5'-pGpG. PLoS One 7(12):e52424.
-
(2012)
PLoS One
, vol.7
, Issue.12
, pp. e52424
-
-
Robert-Paganin, J.1
Nonin-Lecomte, S.2
Réty, S.3
-
32
-
-
84874400919
-
Self-produced exopolysaccharide is a signal that stimulates biofilm formation in Pseudomonas aeruginosa
-
Irie Y, et al. (2012) Self-produced exopolysaccharide is a signal that stimulates biofilm formation in Pseudomonas aeruginosa. Proc Natl Acad Sci USA 109(50):20632-20636.
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, Issue.50
, pp. 20632-20636
-
-
Irie, Y.1
-
33
-
-
0035845587
-
Novel domains of the prokaryotic twocomponent signal transduction systems
-
Galperin MY, Nikolskaya AN, Koonin EV (2001) Novel domains of the prokaryotic twocomponent signal transduction systems. FEMS Microbiol Lett 203(1):11-21.
-
(2001)
FEMS Microbiol Lett
, vol.203
, Issue.1
, pp. 11-21
-
-
Galperin, M.Y.1
Nikolskaya, A.N.2
Koonin, E.V.3
-
34
-
-
33646575898
-
Transcriptome and phenotypic responses of Vibrio cholerae to increased cyclic di-GMP level
-
Beyhan S, Tischler AD, Camilli A, Yildiz FH (2006) Transcriptome and phenotypic responses of Vibrio cholerae to increased cyclic di-GMP level. J Bacteriol 188(10):3600-3613.
-
(2006)
J Bacteriol
, vol.188
, Issue.10
, pp. 3600-3613
-
-
Beyhan, S.1
Tischler, A.D.2
Camilli, A.3
Yildiz, F.H.4
-
35
-
-
34250358327
-
PilZ domain proteins bind cyclic diguanylate and regulate diverse processes in Vibrio cholerae
-
Pratt JT, Tamayo R, Tischler AD, Camilli A (2007) PilZ domain proteins bind cyclic diguanylate and regulate diverse processes in Vibrio cholerae. J Biol Chem 282(17):12860-12870.
-
(2007)
J Biol Chem
, vol.282
, Issue.17
, pp. 12860-12870
-
-
Pratt, J.T.1
Tamayo, R.2
Tischler, A.D.3
Camilli, A.4
-
36
-
-
76749083886
-
Vibrio cholerae VpsT regulates matrix production and motility by directly sensing cyclic di-GMP
-
Krasteva PV, et al. (2010) Vibrio cholerae VpsT regulates matrix production and motility by directly sensing cyclic di-GMP. Science 327(5967):866-868.
-
(2010)
Science
, vol.327
, Issue.5967
, pp. 866-868
-
-
Krasteva, P.V.1
-
37
-
-
84890114269
-
Cyclic di-GMP inhibits Vibrio cholerae motility by repressing induction of transcription and inducing extracellular polysaccharide production
-
Srivastava D, Hsieh ML, Khataokar A, Neiditch MB, Waters CM (2013) Cyclic di-GMP inhibits Vibrio cholerae motility by repressing induction of transcription and inducing extracellular polysaccharide production. Mol Microbiol 90(6):1262-1276.
-
(2013)
Mol Microbiol
, vol.90
, Issue.6
, pp. 1262-1276
-
-
Srivastava, D.1
Hsieh, M.L.2
Khataokar, A.3
Neiditch, M.B.4
Waters, C.M.5
-
38
-
-
80655125443
-
Integration of cyclic di-GMP and quorum sensing in the control of vpsT and aphA in Vibrio cholerae
-
Srivastava D, Harris RC, Waters CM (2011) Integration of cyclic di-GMP and quorum sensing in the control of vpsT and aphA in Vibrio cholerae. J Bacteriol 193(22):6331-6341.
-
(2011)
J Bacteriol
, vol.193
, Issue.22
, pp. 6331-6341
-
-
Srivastava, D.1
Harris, R.C.2
Waters, C.M.3
-
39
-
-
0035283033
-
Exoribonuclease superfamilies: Structural analysis and phylogenetic distribution
-
Zuo Y, Deutscher MP (2001) Exoribonuclease superfamilies: Structural analysis and phylogenetic distribution. Nucleic Acids Res 29(5):1017-1026.
-
(2001)
Nucleic Acids Res
, vol.29
, Issue.5
, pp. 1017-1026
-
-
Zuo, Y.1
Deutscher, M.P.2
-
40
-
-
33751090084
-
The crystal structure of XC847 from Xanthomonas campestris: A 3'-5' oligoribonuclease of DnaQ fold family with a novel opposingly shifted helix
-
Chin KH, Yang CY, Chou CC, Wang AH, Chou SH (2006) The crystal structure of XC847 from Xanthomonas campestris: A 3'-5' oligoribonuclease of DnaQ fold family with a novel opposingly shifted helix. Proteins 65(4):1036-1040.
-
(2006)
Proteins
, vol.65
, Issue.4
, pp. 1036-1040
-
-
Chin, K.H.1
Yang, C.Y.2
Chou, C.C.3
Wang, A.H.4
Chou, S.H.5
-
41
-
-
0037147256
-
Mechanism of action of RNase T. I. Identification of residues required for catalysis, substrate binding, and dimerization
-
Zuo Y, Deutscher MP (2002) Mechanism of action of RNase T. I. Identification of residues required for catalysis, substrate binding, and dimerization. J Biol Chem 277(51):50155-50159.
-
(2002)
J Biol Chem
, vol.277
, Issue.51
, pp. 50155-50159
-
-
Zuo, Y.1
Deutscher, M.P.2
-
43
-
-
1242297814
-
Genes involved in matrix formation in Pseudomonas aeruginosa PA14 biofilms
-
Friedman L, Kolter R (2004) Genes involved in matrix formation in Pseudomonas aeruginosa PA14 biofilms. Mol Microbiol 51(3):675-690.
-
(2004)
Mol Microbiol
, vol.51
, Issue.3
, pp. 675-690
-
-
Friedman, L.1
Kolter, R.2
-
44
-
-
0023090935
-
Regulation of cellulose synthesis in Acetobacter xylinum by cyclic diguanylic acid
-
Ross P, et al. (1987) Regulation of cellulose synthesis in Acetobacter xylinum by cyclic diguanylic acid. Nature 325(6101):279-281.
-
(1987)
Nature
, vol.325
, Issue.6101
, pp. 279-281
-
-
Ross, P.1
-
45
-
-
0016711596
-
A novel oligoribonuclease of Escherichia coli. II. Mechanism of action
-
Datta AK, Niyogi K (1975) A novel oligoribonuclease of Escherichia coli. II. Mechanism of action. J Biol Chem 250(18):7313-7319.
-
(1975)
J Biol Chem
, vol.250
, Issue.18
, pp. 7313-7319
-
-
Datta, A.K.1
Niyogi, K.2
-
46
-
-
84880508942
-
Cyclic di-AMP: Another second messenger enters the fray
-
Corrigan RM, Gründling A (2013) Cyclic di-AMP: Another second messenger enters the fray. Nat Rev Microbiol 11(8):513-524.
-
(2013)
Nat Rev Microbiol
, vol.11
, Issue.8
, pp. 513-524
-
-
Corrigan, R.M.1
Gründling, A.2
-
47
-
-
84859754930
-
Coordinated regulation of accessory genetic elements produces cyclic di-nucleotides for V. Cholerae virulence
-
Davies BW, Bogard RW, Young TS, Mekalanos JJ (2012) Coordinated regulation of accessory genetic elements produces cyclic di-nucleotides for V. cholerae virulence. Cell 149(2):358-370.
-
(2012)
Cell
, vol.149
, Issue.2
, pp. 358-370
-
-
Davies, B.W.1
Bogard, R.W.2
Young, T.S.3
Mekalanos, J.J.4
-
48
-
-
84928570713
-
GEMM-I riboswitches from Geobacter sense the bacterial second messenger cyclic AMP-GMP
-
Kellenberger CA, et al. (2015) GEMM-I riboswitches from Geobacter sense the bacterial second messenger cyclic AMP-GMP. Proc Natl Acad Sci USA 112(17):5383-5388.
-
(2015)
Proc Natl Acad Sci USA
, vol.112
, Issue.17
, pp. 5383-5388
-
-
Kellenberger, C.A.1
-
49
-
-
84923165681
-
An HD-domain phosphodiesterase mediates cooperative hydrolysis of c-di-AMP to affect bacterial growth and virulence
-
Huynh TN, et al. (2015) An HD-domain phosphodiesterase mediates cooperative hydrolysis of c-di-AMP to affect bacterial growth and virulence. Proc Natl Acad Sci USA 112(7):E747-E756.
-
(2015)
Proc Natl Acad Sci USA
, vol.112
, Issue.7
, pp. E747-E756
-
-
Huynh, T.N.1
-
50
-
-
73649086209
-
YybT is a signaling protein that contains a cyclic dinucleotide phosphodiesterase domain and a GGDEF domain with ATPase activity
-
Rao F, et al. (2010) YybT is a signaling protein that contains a cyclic dinucleotide phosphodiesterase domain and a GGDEF domain with ATPase activity. J Biol Chem 285(1):473-482.
-
(2010)
J Biol Chem
, vol.285
, Issue.1
, pp. 473-482
-
-
Rao, F.1
-
51
-
-
84928929061
-
Identification and characterization of phosphodiesterases that specifically degrade 3'3'-cyclic GMP-AMP
-
Gao J, et al. (2015) Identification and characterization of phosphodiesterases that specifically degrade 3'3'-cyclic GMP-AMP. Cell Res 25(5):539-550.
-
(2015)
Cell Res
, vol.25
, Issue.5
, pp. 539-550
-
-
Gao, J.1
-
52
-
-
0033956060
-
The COG database: A tool for genome-scale analysis of protein functions and evolution
-
Tatusov RL, Galperin MY, Natale DA, Koonin EV (2000) The COG database: A tool for genome-scale analysis of protein functions and evolution. Nucleic Acids Res 28(1):33-36.
-
(2000)
Nucleic Acids Res
, vol.28
, Issue.1
, pp. 33-36
-
-
Tatusov, R.L.1
Galperin, M.Y.2
Natale, D.A.3
Koonin, E.V.4
-
53
-
-
84886035253
-
Functional characterization of core components of the Bacillus subtilis cyclic-di-GMP signaling pathway
-
Gao X, et al. (2013) Functional characterization of core components of the Bacillus subtilis cyclic-di-GMP signaling pathway. J Bacteriol 195(21):4782-4792.
-
(2013)
J Bacteriol
, vol.195
, Issue.21
, pp. 4782-4792
-
-
Gao, X.1
-
54
-
-
79958009528
-
C-di-AMP reports DNA integrity during sporulation in Bacillus subtilis
-
Oppenheimer-Shaanan Y, Wexselblatt E, Katzhendler J, Yavin E, Ben-Yehuda S (2011) c-di-AMP reports DNA integrity during sporulation in Bacillus subtilis. EMBO Rep 12(6):594-601.
-
(2011)
EMBO Rep
, vol.12
, Issue.6
, pp. 594-601
-
-
Oppenheimer-Shaanan, Y.1
Wexselblatt, E.2
Katzhendler, J.3
Yavin, E.4
Ben-Yehuda, S.5
-
55
-
-
43049087389
-
Structural biochemistry of a bacterial checkpoint protein reveals diadenylate cyclase activity regulated by DNA recombination intermediates
-
Witte G, Hartung S, Büttner K, Hopfner KP (2008) Structural biochemistry of a bacterial checkpoint protein reveals diadenylate cyclase activity regulated by DNA recombination intermediates. Mol Cell 30(2):167-178.
-
(2008)
Mol Cell
, vol.30
, Issue.2
, pp. 167-178
-
-
Witte, G.1
Hartung, S.2
Büttner, K.3
Hopfner, K.P.4
-
56
-
-
34547851775
-
YtqI from Bacillus subtilis has both oligoribonuclease and pAp-phosphatase activity
-
Mechold U, Fang G, Ngo S, Ogryzko V, Danchin A (2007) YtqI from Bacillus subtilis has both oligoribonuclease and pAp-phosphatase activity. Nucleic Acids Res 35(13):4552-4561.
-
(2007)
Nucleic Acids Res
, vol.35
, Issue.13
, pp. 4552-4561
-
-
Mechold, U.1
Fang, G.2
Ngo, S.3
Ogryzko, V.4
Danchin, A.5
-
57
-
-
69849089441
-
Degradation of nanoRNA is performed by multiple redundant RNases in Bacillus subtilis
-
Fang M, et al. (2009) Degradation of nanoRNA is performed by multiple redundant RNases in Bacillus subtilis. Nucleic Acids Res 37(15):5114-5125.
-
(2009)
Nucleic Acids Res
, vol.37
, Issue.15
, pp. 5114-5125
-
-
Fang, M.1
-
58
-
-
84055222174
-
Characterization of NrnA homologs from Mycobacterium tuberculosis and Mycoplasma pneumoniae
-
Postic G, Danchin A, Mechold U (2012) Characterization of NrnA homologs from Mycobacterium tuberculosis and Mycoplasma pneumoniae. RNA 18(1):155-165.
-
(2012)
RNA
, vol.18
, Issue.1
, pp. 155-165
-
-
Postic, G.1
Danchin, A.2
Mechold, U.3
-
59
-
-
84859146569
-
Identification of a novel nanoRNase in Bartonella
-
Liu MF, et al. (2012) Identification of a novel nanoRNase in Bartonella. Microbiology 158(Pt 4):886-895.
-
(2012)
Microbiology
, vol.158
, pp. 886-895
-
-
Liu, M.F.1
-
60
-
-
0033551137
-
Oligoribonuclease is an essential component of the mRNA decay pathway
-
Ghosh S, Deutscher MP (1999) Oligoribonuclease is an essential component of the mRNA decay pathway. Proc Natl Acad Sci USA 96(8):4372-4377.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, Issue.8
, pp. 4372-4377
-
-
Ghosh, S.1
Deutscher, M.P.2
-
61
-
-
0032955582
-
Identification of an Escherichia coli pepA homolog and its involvement in suppression of the algB phenotype in mucoid Pseudomonas aeruginosa
-
Woolwine SC, Wozniak DJ (1999) Identification of an Escherichia coli pepA homolog and its involvement in suppression of the algB phenotype in mucoid Pseudomonas aeruginosa. J Bacteriol 181(1):107-116.
-
(1999)
J Bacteriol
, vol.181
, Issue.1
, pp. 107-116
-
-
Woolwine, S.C.1
Wozniak, D.J.2
-
62
-
-
17844361922
-
Ribonucleases J1 and J2: Two novel endoribonucleases in B-subtilis with functional homology to E-coli RNase E
-
Even S, et al. (2005) Ribonucleases J1 and J2: Two novel endoribonucleases in B-subtilis with functional homology to E-coli RNase E. Nucleic Acids Res 33(7):2141-2152.
-
(2005)
Nucleic Acids Res
, vol.33
, Issue.7
, pp. 2141-2152
-
-
Even, S.1
-
63
-
-
0034708447
-
The CafA protein required for the 5'-maturation of 16 S rRNA is a 5'-end-dependent ribonuclease that has contextdependent broad sequence specificity
-
Tock MR, Walsh AP, Carroll G, McDowall KJ (2000) The CafA protein required for the 5'-maturation of 16 S rRNA is a 5'-end-dependent ribonuclease that has contextdependent broad sequence specificity. J Biol Chem 275(12):8726-8732.
-
(2000)
J Biol Chem
, vol.275
, Issue.12
, pp. 8726-8732
-
-
Tock, M.R.1
Walsh, A.P.2
Carroll, G.3
McDowall, K.J.4
-
64
-
-
3042645502
-
Catalytic activation of multimeric RNase E and RNase G by 5'-monophosphorylated RNA
-
Jiang X, Belasco JG (2004) Catalytic activation of multimeric RNase E and RNase G by 5'-monophosphorylated RNA. Proc Natl Acad Sci USA 101(25):9211-9216.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, Issue.25
, pp. 9211-9216
-
-
Jiang, X.1
Belasco, J.G.2
-
65
-
-
72949110938
-
The sequence of sites recognised by a member of the RNase E/G family can control the maximal rate of cleavage, while a 5'-monophosphorylated end appears to function cooperatively in mediating RNA binding
-
Jourdan SS, Kime L, McDowall KJ (2010) The sequence of sites recognised by a member of the RNase E/G family can control the maximal rate of cleavage, while a 5'-monophosphorylated end appears to function cooperatively in mediating RNA binding. Biochem Biophys Res Commun 391(1):879-883.
-
(2010)
Biochem Biophys Res Commun
, vol.391
, Issue.1
, pp. 879-883
-
-
Jourdan, S.S.1
Kime, L.2
McDowall, K.J.3
-
66
-
-
36849032886
-
Sensing of 5' monophosphate by Escherichia coli RNase G can significantly enhance association with RNA and stimulate the decay of functional mRNA transcripts in vivo
-
Jourdan SS, McDowall KJ (2008) Sensing of 5' monophosphate by Escherichia coli RNase G can significantly enhance association with RNA and stimulate the decay of functional mRNA transcripts in vivo. Mol Microbiol 67(1):102-115.
-
(2008)
Mol Microbiol
, vol.67
, Issue.1
, pp. 102-115
-
-
Jourdan, S.S.1
McDowall, K.J.2
-
67
-
-
27144495430
-
Structure of Escherichia coli RNase E catalytic domain and implications for RNA turnover
-
Callaghan AJ, et al. (2005) Structure of Escherichia coli RNase E catalytic domain and implications for RNA turnover. Nature 437(7062):1187-1191.
-
(2005)
Nature
, vol.437
, Issue.7062
, pp. 1187-1191
-
-
Callaghan, A.J.1
-
68
-
-
0016817098
-
A novel oligoribonuclease of Escherichia coli. I. Isolation and properties
-
Niyogi SK, Datta AK (1975) A novel oligoribonuclease of Escherichia coli. I. Isolation and properties. J Biol Chem 250(18):7307-7312.
-
(1975)
J Biol Chem
, vol.250
, Issue.18
, pp. 7307-7312
-
-
Niyogi, S.K.1
Datta, A.K.2
-
69
-
-
80053362707
-
NanoRNAs: A class of small RNAs that can prime transcription initiation in bacteria
-
Nickels BE, Dove SL (2011) NanoRNAs: A class of small RNAs that can prime transcription initiation in bacteria. J Mol Biol 412(5):772-781.
-
(2011)
J Mol Biol
, vol.412
, Issue.5
, pp. 772-781
-
-
Nickels, B.E.1
Dove, S.L.2
-
70
-
-
34547682212
-
The second messenger bis-(3'-5')-cyclic-GMP and its PilZ domain-containing receptor Alg44 are required for alginate biosynthesis in Pseudomonas aeruginosa
-
Merighi M, Lee VT, Hyodo M, Hayakawa Y, Lory S (2007) The second messenger bis-(3'-5')-cyclic-GMP and its PilZ domain-containing receptor Alg44 are required for alginate biosynthesis in Pseudomonas aeruginosa. Mol Microbiol 65(4):876-895.
-
(2007)
Mol Microbiol
, vol.65
, Issue.4
, pp. 876-895
-
-
Merighi, M.1
Lee, V.T.2
Hyodo, M.3
Hayakawa, Y.4
Lory, S.5
-
71
-
-
84866351420
-
Structural insights into the regulatory mechanism of the response regulator RocR from Pseudomonas aeruginosa in cyclic Di-GMP signaling
-
Chen MW, et al. (2012) Structural insights into the regulatory mechanism of the response regulator RocR from Pseudomonas aeruginosa in cyclic Di-GMP signaling. J Bacteriol 194(18):4837-4846.
-
(2012)
J Bacteriol
, vol.194
, Issue.18
, pp. 4837-4846
-
-
Chen, M.W.1
-
72
-
-
13144257722
-
A novel two-component system controls the expression of Pseudomonas aeruginosa fimbrial cup genes
-
Kulasekara HD, et al. (2005) A novel two-component system controls the expression of Pseudomonas aeruginosa fimbrial cup genes. Mol Microbiol 55(2):368-380.
-
(2005)
Mol Microbiol
, vol.55
, Issue.2
, pp. 368-380
-
-
Kulasekara, H.D.1
-
73
-
-
0025908061
-
Alginate synthesis by Pseudomonas aeruginosa: A key pathogenic factor in chronic pulmonary infections of cystic fibrosis patients
-
May TB, et al. (1991) Alginate synthesis by Pseudomonas aeruginosa: A key pathogenic factor in chronic pulmonary infections of cystic fibrosis patients. Clin Microbiol Rev 4(2):191-206.
-
(1991)
Clin Microbiol Rev
, vol.4
, Issue.2
, pp. 191-206
-
-
May, T.B.1
-
74
-
-
0027314126
-
Genetic analysis of the alginate biosynthetic gene cluster of Pseudomonas aeruginosa shows evidence of an operonic structure
-
Chitnis CE, Ohman DE (1993) Genetic analysis of the alginate biosynthetic gene cluster of Pseudomonas aeruginosa shows evidence of an operonic structure. Mol Microbiol 8(3):583-593.
-
(1993)
Mol Microbiol
, vol.8
, Issue.3
, pp. 583-593
-
-
Chitnis, C.E.1
Ohman, D.E.2
-
75
-
-
0023262549
-
Construction and characterization of Pseudomonas aeruginosa algB mutants: Role of algB in high-level production of alginate
-
Goldberg JB, Ohman DE (1987) Construction and characterization of Pseudomonas aeruginosa algB mutants: Role of algB in high-level production of alginate. J Bacteriol 169(4):1593-1602.
-
(1987)
J Bacteriol
, vol.169
, Issue.4
, pp. 1593-1602
-
-
Goldberg, J.B.1
Ohman, D.E.2
-
76
-
-
0032575051
-
A broad-hostrange Flp-FRT recombination system for site-specific excision of chromosomallylocated DNA sequences: Application for isolation of unmarked Pseudomonas aeruginosa mutants
-
Hoang TT, Karkhoff-Schweizer RR, Kutchma AJ, Schweizer HP (1998) A broad-hostrange Flp-FRT recombination system for site-specific excision of chromosomallylocated DNA sequences: Application for isolation of unmarked Pseudomonas aeruginosa mutants. Gene 212(1):77-86.
-
(1998)
Gene
, vol.212
, Issue.1
, pp. 77-86
-
-
Hoang, T.T.1
Karkhoff-Schweizer, R.R.2
Kutchma, A.J.3
Schweizer, H.P.4
-
77
-
-
0033968474
-
Integration-proficient plasmids for Pseudomonas aeruginosa: Site-specific integration and use for engineering of reporter and expression strains
-
Hoang TT, Kutchma AJ, Becher A, Schweizer HP (2000) Integration-proficient plasmids for Pseudomonas aeruginosa: Site-specific integration and use for engineering of reporter and expression strains. Plasmid 43(1):59-72.
-
(2000)
Plasmid
, vol.43
, Issue.1
, pp. 59-72
-
-
Hoang, T.T.1
Kutchma, A.J.2
Becher, A.3
Schweizer, H.P.4
-
79
-
-
84864498015
-
Quantification of high-specificity cyclic diguanylate signaling
-
Massie JP, et al. (2012) Quantification of high-specificity cyclic diguanylate signaling. Proc Natl Acad Sci USA 109(31):12746-12751.
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, Issue.31
, pp. 12746-12751
-
-
Massie, J.P.1
-
80
-
-
84898856229
-
Catheter-associated urinary tract infection by Pseudomonas aeruginosa is mediated by exopolysaccharideindependent biofilms
-
Cole SJ, Records AR, Orr MW, Linden SB, Lee VT (2014) Catheter-associated urinary tract infection by Pseudomonas aeruginosa is mediated by exopolysaccharideindependent biofilms. Infect Immun 82(5):2048-2058.
-
(2014)
Infect Immun
, vol.82
, Issue.5
, pp. 2048-2058
-
-
Cole, S.J.1
Records, A.R.2
Orr, M.W.3
Linden, S.B.4
Lee, V.T.5
|