-
1
-
-
84873320525
-
Mechanisms of programmed DNA lesions and genomic instability in the immune system
-
F.W. Alt, Y. Zhang, F.L. Meng, C. Guo, and B. Schwer Mechanisms of programmed DNA lesions and genomic instability in the immune system Cell 152 2013 417 429
-
(2013)
Cell
, vol.152
, pp. 417-429
-
-
Alt, F.W.1
Zhang, Y.2
Meng, F.L.3
Guo, C.4
Schwer, B.5
-
2
-
-
0027227311
-
Discriminating intrinsic and antigen-selected mutational hotspots in immunoglobulin V genes
-
A.G. Betz, M.S. Neuberger, and C. Milstein Discriminating intrinsic and antigen-selected mutational hotspots in immunoglobulin V genes Immunol. Today 14 1993 405 411
-
(1993)
Immunol. Today
, vol.14
, pp. 405-411
-
-
Betz, A.G.1
Neuberger, M.S.2
Milstein, C.3
-
3
-
-
0027499308
-
Passenger transgenes reveal intrinsic specificity of the antibody hypermutation mechanism: Clustering, polarity, and specific hot spots
-
A.G. Betz, C. Rada, R. Pannell, C. Milstein, and M.S. Neuberger Passenger transgenes reveal intrinsic specificity of the antibody hypermutation mechanism: clustering, polarity, and specific hot spots Proc. Natl. Acad. Sci. USA 90 1993 2385 2388
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 2385-2388
-
-
Betz, A.G.1
Rada, C.2
Pannell, R.3
Milstein, C.4
Neuberger, M.S.5
-
4
-
-
84867742557
-
Location and length distribution of somatic hypermutation-associated DNA insertions and deletions reveals regions of antibody structural plasticity
-
B.S. Briney, J.R. Willis, and J.E. Crowe Jr. Location and length distribution of somatic hypermutation-associated DNA insertions and deletions reveals regions of antibody structural plasticity Genes Immun. 13 2012 523 529
-
(2012)
Genes Immun.
, vol.13
, pp. 523-529
-
-
Briney, B.S.1
Willis, J.R.2
Crowe, J.E.3
-
5
-
-
0033637358
-
DNA double-strand breaks in immunoglobulin genes undergoing somatic hypermutation
-
L. Bross, Y. Fukita, F. McBlane, C. Démollière, K. Rajewsky, and H. Jacobs DNA double-strand breaks in immunoglobulin genes undergoing somatic hypermutation Immunity 13 2000 589 597
-
(2000)
Immunity
, vol.13
, pp. 589-597
-
-
Bross, L.1
Fukita, Y.2
McBlane, F.3
Démollière, C.4
Rajewsky, K.5
Jacobs, H.6
-
6
-
-
84900400827
-
Targeting of somatic hypermutation by immunoglobulin enhancer and enhancer-like sequences
-
J.M. Buerstedde, J. Alinikula, H. Arakawa, J.J. McDonald, and D.G. Schatz Targeting of somatic hypermutation by immunoglobulin enhancer and enhancer-like sequences PLoS Biol. 12 2014 e1001831
-
(2014)
PLoS Biol.
, vol.12
-
-
Buerstedde, J.M.1
Alinikula, J.2
Arakawa, H.3
McDonald, J.J.4
Schatz, D.G.5
-
7
-
-
1542377328
-
B cell receptor signal strength determines B cell fate
-
S. Casola, K.L. Otipoby, M. Alimzhanov, S. Humme, N. Uyttersprot, J.L. Kutok, M.C. Carroll, and K. Rajewsky B cell receptor signal strength determines B cell fate Nat. Immunol. 5 2004 317 327
-
(2004)
Nat. Immunol.
, vol.5
, pp. 317-327
-
-
Casola, S.1
Otipoby, K.L.2
Alimzhanov, M.3
Humme, S.4
Uyttersprot, N.5
Kutok, J.L.6
Carroll, M.C.7
Rajewsky, K.8
-
9
-
-
0027215522
-
RAG-2-deficient blastocyst complementation: An assay of gene function in lymphocyte development
-
J. Chen, R. Lansford, V. Stewart, F. Young, and F.W. Alt RAG-2-deficient blastocyst complementation: an assay of gene function in lymphocyte development Proc. Natl. Acad. Sci. USA 90 1993 4528 4532
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 4528-4532
-
-
Chen, J.1
Lansford, R.2
Stewart, V.3
Young, F.4
Alt, F.W.5
-
10
-
-
34249790004
-
Molecular mechanisms of antibody somatic hypermutation
-
J.M. Di Noia, and M.S. Neuberger Molecular mechanisms of antibody somatic hypermutation Annu. Rev. Biochem. 76 2007 1 22
-
(2007)
Annu. Rev. Biochem.
, vol.76
, pp. 1-22
-
-
Di Noia, J.M.1
Neuberger, M.S.2
-
11
-
-
0031569118
-
Analysis of the frequency and pattern of somatic mutations within nonproductively rearranged human variable heavy chain genes
-
T. Dörner, H.P. Brezinschek, R.I. Brezinschek, S.J. Foster, R. Domiati-Saad, and P.E. Lipsky Analysis of the frequency and pattern of somatic mutations within nonproductively rearranged human variable heavy chain genes J. Immunol. 158 1997 2779 2789
-
(1997)
J. Immunol.
, vol.158
, pp. 2779-2789
-
-
Dörner, T.1
Brezinschek, H.P.2
Brezinschek, R.I.3
Foster, S.J.4
Domiati-Saad, R.5
Lipsky, P.E.6
-
12
-
-
0027364313
-
Analysis of somatic hypermutation in mouse Peyer's patches using immunoglobulin κ light-chain transgenes
-
A. González-Fernández, and C. Milstein Analysis of somatic hypermutation in mouse Peyer's patches using immunoglobulin κ light-chain transgenes Proc. Natl. Acad. Sci. USA 90 1993 9862 9866
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 9862-9866
-
-
González-Fernández, A.1
Milstein, C.2
-
13
-
-
0032478071
-
Frequent occurrence of deletions and duplications during somatic hypermutation: Implications for oncogene translocations and heavy chain disease
-
T. Goossens, U. Klein, and R. Küppers Frequent occurrence of deletions and duplications during somatic hypermutation: implications for oncogene translocations and heavy chain disease Proc. Natl. Acad. Sci. USA 95 1998 2463 2468
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 2463-2468
-
-
Goossens, T.1
Klein, U.2
Küppers, R.3
-
14
-
-
60749084171
-
DNA targets of AID evolutionary link between antibody somatic hypermutation and class switch recombination
-
J.A. Hackney, S. Misaghi, K. Senger, C. Garris, Y. Sun, M.N. Lorenzo, and A.A. Zarrin DNA targets of AID evolutionary link between antibody somatic hypermutation and class switch recombination Adv. Immunol. 101 2009 163 189
-
(2009)
Adv. Immunol.
, vol.101
, pp. 163-189
-
-
Hackney, J.A.1
Misaghi, S.2
Senger, K.3
Garris, C.4
Sun, Y.5
Lorenzo, M.N.6
Zarrin, A.A.7
-
15
-
-
79960990878
-
Overlapping activation-induced cytidine deaminase hotspot motifs in Ig class-switch recombination
-
L. Han, S. Masani, and K. Yu Overlapping activation-induced cytidine deaminase hotspot motifs in Ig class-switch recombination Proc. Natl. Acad. Sci. USA 108 2011 11584 11589
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 11584-11589
-
-
Han, L.1
Masani, S.2
Yu, K.3
-
16
-
-
84947705376
-
Related mechanisms of antibody somatic hypermutation and class switch recombination
-
MDNA3-0037-2014
-
J.K. Hwang, F.W. Alt, and L.S. Yeap Related mechanisms of antibody somatic hypermutation and class switch recombination Microbiol. Spectr. 3 1 2015 10.1128/microbiolspec.MDNA3-0037-2014 MDNA3-0037-2014
-
(2015)
Microbiol. Spectr.
, vol.3
, Issue.1
-
-
Hwang, J.K.1
Alt, F.W.2
Yeap, L.S.3
-
17
-
-
84907681865
-
Immunoglobulin gene insertions and deletions in the affinity maturation of HIV-1 broadly reactive neutralizing antibodies
-
T.B. Kepler, H.X. Liao, S.M. Alam, R. Bhaskarabhatla, R. Zhang, C. Yandava, S. Stewart, K. Anasti, G. Kelsoe, R. Parks, and et al. Immunoglobulin gene insertions and deletions in the affinity maturation of HIV-1 broadly reactive neutralizing antibodies Cell Host Microbe 16 2014 304 313
-
(2014)
Cell Host Microbe
, vol.16
, pp. 304-313
-
-
Kepler, T.B.1
Liao, H.X.2
Alam, S.M.3
Bhaskarabhatla, R.4
Zhang, R.5
Yandava, C.6
Stewart, S.7
Anasti, K.8
Kelsoe, G.9
Parks, R.10
-
18
-
-
84914142170
-
Intestinal bacteria and development of the antibody repertoire
-
D.K. Lanning, and K.L. Knight Intestinal bacteria and development of the antibody repertoire Discov. Med. 5 2005 393 398
-
(2005)
Discov. Med.
, vol.5
, pp. 393-398
-
-
Lanning, D.K.1
Knight, K.L.2
-
19
-
-
63149179802
-
Balancing AID and DNA repair during somatic hypermutation
-
M. Liu, and D.G. Schatz Balancing AID and DNA repair during somatic hypermutation Trends Immunol. 30 2009 173 181
-
(2009)
Trends Immunol.
, vol.30
, pp. 173-181
-
-
Liu, M.1
Schatz, D.G.2
-
21
-
-
84879302728
-
HIV-1 neutralizing antibodies: Understanding nature's pathways
-
J.R. Mascola, and B.F. Haynes HIV-1 neutralizing antibodies: understanding nature's pathways Immunol. Rev. 254 2013 225 244
-
(2013)
Immunol. Rev.
, vol.254
, pp. 225-244
-
-
Mascola, J.R.1
Haynes, B.F.2
-
22
-
-
77955964086
-
AID and somatic hypermutation
-
R.W. Maul, and P.J. Gearhart AID and somatic hypermutation Adv. Immunol. 105 2010 159 191
-
(2010)
Adv. Immunol.
, vol.105
, pp. 159-191
-
-
Maul, R.W.1
Gearhart, P.J.2
-
23
-
-
77953962524
-
Controlling somatic hypermutation in immunoglobulin variable and switch regions
-
R.W. Maul, and P.J. Gearhart Controlling somatic hypermutation in immunoglobulin variable and switch regions Immunol. Res. 47 2010 113 122
-
(2010)
Immunol. Res.
, vol.47
, pp. 113-122
-
-
Maul, R.W.1
Gearhart, P.J.2
-
24
-
-
84908253754
-
Spt5 accumulation at variable genes distinguishes somatic hypermutation in germinal center B cells from ex vivo-activated cells
-
R.W. Maul, Z. Cao, L. Venkataraman, C.A. Giorgetti, J.L. Press, Y. Denizot, H. Du, R. Sen, and P.J. Gearhart Spt5 accumulation at variable genes distinguishes somatic hypermutation in germinal center B cells from ex vivo-activated cells J. Exp. Med. 211 2014 2297 2306
-
(2014)
J. Exp. Med.
, vol.211
, pp. 2297-2306
-
-
Maul, R.W.1
Cao, Z.2
Venkataraman, L.3
Giorgetti, C.A.4
Press, J.L.5
Denizot, Y.6
Du, H.7
Sen, R.8
Gearhart, P.J.9
-
25
-
-
84919903836
-
Convergent transcription at intragenic super-enhancers targets AID-initiated genomic instability
-
F.L. Meng, Z. Du, A. Federation, J. Hu, Q. Wang, K.R. Kieffer-Kwon, R.M. Meyers, C. Amor, C.R. Wasserman, D. Neuberg, and et al. Convergent transcription at intragenic super-enhancers targets AID-initiated genomic instability Cell 159 2014 1538 1548
-
(2014)
Cell
, vol.159
, pp. 1538-1548
-
-
Meng, F.L.1
Du, Z.2
Federation, A.3
Hu, J.4
Wang, Q.5
Kieffer-Kwon, K.R.6
Meyers, R.M.7
Amor, C.8
Wasserman, C.R.9
Neuberg, D.10
-
26
-
-
4444342835
-
The lingering enigma of the allelic exclusion mechanism
-
R. Mostoslavsky, F.W. Alt, and K. Rajewsky The lingering enigma of the allelic exclusion mechanism Cell 118 2004 539 544
-
(2004)
Cell
, vol.118
, pp. 539-544
-
-
Mostoslavsky, R.1
Alt, F.W.2
Rajewsky, K.3
-
27
-
-
0034268780
-
Class switch recombination and hypermutation require activation-induced cytidine deaminase (AID), a potential RNA editing enzyme
-
M. Muramatsu, K. Kinoshita, S. Fagarasan, S. Yamada, Y. Shinkai, and T. Honjo Class switch recombination and hypermutation require activation-induced cytidine deaminase (AID), a potential RNA editing enzyme Cell 102 2000 553 563
-
(2000)
Cell
, vol.102
, pp. 553-563
-
-
Muramatsu, M.1
Kinoshita, K.2
Fagarasan, S.3
Yamada, S.4
Shinkai, Y.5
Honjo, T.6
-
28
-
-
34249801641
-
Discovery of activation-induced cytidine deaminase, the engraver of antibody memory
-
M. Muramatsu, H. Nagaoka, R. Shinkura, N.A. Begum, and T. Honjo Discovery of activation-induced cytidine deaminase, the engraver of antibody memory Adv. Immunol. 94 2007 1 36
-
(2007)
Adv. Immunol.
, vol.94
, pp. 1-36
-
-
Muramatsu, M.1
Nagaoka, H.2
Shinkura, R.3
Begum, N.A.4
Honjo, T.5
-
29
-
-
0037128169
-
Activation-induced deaminase (AID)-directed hypermutation in the immunoglobulin Smu region: Implication of AID involvement in a common step of class switch recombination and somatic hypermutation
-
H. Nagaoka, M. Muramatsu, N. Yamamura, K. Kinoshita, and T. Honjo Activation-induced deaminase (AID)-directed hypermutation in the immunoglobulin Smu region: implication of AID involvement in a common step of class switch recombination and somatic hypermutation J. Exp. Med. 195 2002 529 534
-
(2002)
J. Exp. Med.
, vol.195
, pp. 529-534
-
-
Nagaoka, H.1
Muramatsu, M.2
Yamamura, N.3
Kinoshita, K.4
Honjo, T.5
-
31
-
-
42649124572
-
The biochemistry of somatic hypermutation
-
J.U. Peled, F.L. Kuang, M.D. Iglesias-Ussel, S. Roa, S.L. Kalis, M.F. Goodman, and M.D. Scharff The biochemistry of somatic hypermutation Annu. Rev. Immunol. 26 2008 481 511
-
(2008)
Annu. Rev. Immunol.
, vol.26
, pp. 481-511
-
-
Peled, J.U.1
Kuang, F.L.2
Iglesias-Ussel, M.D.3
Roa, S.4
Kalis, S.L.5
Goodman, M.F.6
Scharff, M.D.7
-
32
-
-
6344256944
-
Mismatch recognition and uracil excision provide complementary paths to both Ig switching and the A/T-focused phase of somatic mutation
-
C. Rada, J.M. Di Noia, and M.S. Neuberger Mismatch recognition and uracil excision provide complementary paths to both Ig switching and the A/T-focused phase of somatic mutation Mol. Cell 16 2004 163 171
-
(2004)
Mol. Cell
, vol.16
, pp. 163-171
-
-
Rada, C.1
Di Noia, J.M.2
Neuberger, M.S.3
-
33
-
-
84884278329
-
The IgH 3′ regulatory region controls somatic hypermutation in germinal center B cells
-
P. Rouaud, C. Vincent-Fabert, A. Saintamand, R. Fiancette, M. Marquet, I. Robert, B. Reina-San-Martin, E. Pinaud, M. Cogné, and Y. Denizot The IgH 3′ regulatory region controls somatic hypermutation in germinal center B cells J. Exp. Med. 210 2013 1501 1507
-
(2013)
J. Exp. Med.
, vol.210
, pp. 1501-1507
-
-
Rouaud, P.1
Vincent-Fabert, C.2
Saintamand, A.3
Fiancette, R.4
Marquet, M.5
Robert, I.6
Reina-San-Martin, B.7
Pinaud, E.8
Cogné, M.9
Denizot, Y.10
-
34
-
-
84865155904
-
Does DNA repair occur during somatic hypermutation?
-
H. Saribasak, and P.J. Gearhart Does DNA repair occur during somatic hypermutation? Semin. Immunol. 24 2012 287 292
-
(2012)
Semin. Immunol.
, vol.24
, pp. 287-292
-
-
Saribasak, H.1
Gearhart, P.J.2
-
35
-
-
0038664358
-
The influence of transcriptional orientation on endogenous switch region function
-
R. Shinkura, M. Tian, M. Smith, K. Chua, Y. Fujiwara, and F.W. Alt The influence of transcriptional orientation on endogenous switch region function Nat. Immunol. 4 2003 435 441
-
(2003)
Nat. Immunol.
, vol.4
, pp. 435-441
-
-
Shinkura, R.1
Tian, M.2
Smith, M.3
Chua, K.4
Fujiwara, Y.5
Alt, F.W.6
-
36
-
-
0030888193
-
B cell development under the condition of allelic inclusion
-
E. Sonoda, Y. Pewzner-Jung, S. Schwers, S. Taki, S. Jung, D. Eilat, and K. Rajewsky B cell development under the condition of allelic inclusion Immunity 6 1997 225 233
-
(1997)
Immunity
, vol.6
, pp. 225-233
-
-
Sonoda, E.1
Pewzner-Jung, Y.2
Schwers, S.3
Taki, S.4
Jung, S.5
Eilat, D.6
Rajewsky, K.7
-
38
-
-
84893404966
-
Why does somatic hypermutation by AID require transcription of its target genes?
-
U. Storb Why does somatic hypermutation by AID require transcription of its target genes? Adv. Immunol. 122 2014 253 277
-
(2014)
Adv. Immunol.
, vol.122
, pp. 253-277
-
-
Storb, U.1
-
40
-
-
84923195015
-
Overlapping hotspots in CDRs are critical sites for V region diversification
-
L. Wei, R. Chahwan, S. Wang, X. Wang, P.T. Pham, M.F. Goodman, A. Bergman, M.D. Scharff, and T. MacCarthy Overlapping hotspots in CDRs are critical sites for V region diversification Proc. Natl. Acad. Sci. USA 112 2015 E728 E737
-
(2015)
Proc. Natl. Acad. Sci. USA
, vol.112
, pp. E728-E737
-
-
Wei, L.1
Chahwan, R.2
Wang, S.3
Wang, X.4
Pham, P.T.5
Goodman, M.F.6
Bergman, A.7
Scharff, M.D.8
MacCarthy, T.9
-
41
-
-
0026515436
-
Accumulation of somatic mutants in the B cell compartment after primary immunization with a T cell-dependent antigen
-
U. Weiss, R. Zoebelein, and K. Rajewsky Accumulation of somatic mutants in the B cell compartment after primary immunization with a T cell-dependent antigen Eur. J. Immunol. 22 1992 511 517
-
(1992)
Eur. J. Immunol.
, vol.22
, pp. 511-517
-
-
Weiss, U.1
Zoebelein, R.2
Rajewsky, K.3
-
42
-
-
84883741301
-
Microbial colonization influences early B-lineage development in the gut lamina propria
-
D.R. Wesemann, A.J. Portuguese, R.M. Meyers, M.P. Gallagher, K. Cluff-Jones, J.M. Magee, R.A. Panchakshari, S.J. Rodig, T.B. Kepler, and F.W. Alt Microbial colonization influences early B-lineage development in the gut lamina propria Nature 501 2013 112 115
-
(2013)
Nature
, vol.501
, pp. 112-115
-
-
Wesemann, D.R.1
Portuguese, A.J.2
Meyers, R.M.3
Gallagher, M.P.4
Cluff-Jones, K.5
Magee, J.M.6
Panchakshari, R.A.7
Rodig, S.J.8
Kepler, T.B.9
Alt, F.W.10
-
43
-
-
80052942203
-
Focused evolution of HIV-1 neutralizing antibodies revealed by structures and deep sequencing
-
X. Wu, T. Zhou, J. Zhu, B. Zhang, I. Georgiev, C. Wang, X. Chen, N.S. Longo, M. Louder, K. McKee, et al. NISC Comparative Sequencing Program Focused evolution of HIV-1 neutralizing antibodies revealed by structures and deep sequencing Science 333 2011 1593 1602
-
(2011)
Science
, vol.333
, pp. 1593-1602
-
-
Wu, X.1
Zhou, T.2
Zhu, J.3
Zhang, B.4
Georgiev, I.5
Wang, C.6
Chen, X.7
Longo, N.S.8
Louder, M.9
McKee, K.10
-
44
-
-
34249810672
-
Targeting of AID-mediated sequence diversification by cis-acting determinants
-
S.Y. Yang, and D.G. Schatz Targeting of AID-mediated sequence diversification by cis-acting determinants Adv. Immunol. 94 2007 109 125
-
(2007)
Adv. Immunol.
, vol.94
, pp. 109-125
-
-
Yang, S.Y.1
Schatz, D.G.2
-
45
-
-
0029067875
-
Targeting of non-Ig sequences in place of the V segment by somatic hypermutation
-
J. Yélamos, N. Klix, B. Goyenechea, F. Lozano, Y.L. Chui, A. González Fernández, R. Pannell, M.S. Neuberger, and C. Milstein Targeting of non-Ig sequences in place of the V segment by somatic hypermutation Nature 376 1995 225 229
-
(1995)
Nature
, vol.376
, pp. 225-229
-
-
Yélamos, J.1
Klix, N.2
Goyenechea, B.3
Lozano, F.4
Chui, Y.L.5
González Fernández, A.6
Pannell, R.7
Neuberger, M.S.8
Milstein, C.9
-
46
-
-
13444255004
-
An evolutionarily conserved target motif for immunoglobulin class-switch recombination
-
A.A. Zarrin, F.W. Alt, J. Chaudhuri, N. Stokes, D. Kaushal, L. Du Pasquier, and M. Tian An evolutionarily conserved target motif for immunoglobulin class-switch recombination Nat. Immunol. 5 2004 1275 1281
-
(2004)
Nat. Immunol.
, vol.5
, pp. 1275-1281
-
-
Zarrin, A.A.1
Alt, F.W.2
Chaudhuri, J.3
Stokes, N.4
Kaushal, D.5
Du Pasquier, L.6
Tian, M.7
-
47
-
-
84928975352
-
Non-coding RNA generated following lariat debranching mediates targeting of AID to DNA
-
S. Zheng, B.Q. Vuong, B. Vaidyanathan, J.Y. Lin, F.T. Huang, and J. Chaudhuri Non-coding RNA generated following lariat debranching mediates targeting of AID to DNA Cell 161 2015 762 773
-
(2015)
Cell
, vol.161
, pp. 762-773
-
-
Zheng, S.1
Vuong, B.Q.2
Vaidyanathan, B.3
Lin, J.Y.4
Huang, F.T.5
Chaudhuri, J.6
|