-
1
-
-
77649165394
-
Maintaining genome stability at the replication fork
-
Branzei, D., and Foiani, M. (2010) Maintaining genome stability at the replication fork. Nat. Rev. Mol. Cell Biol. 11, 208-219
-
(2010)
Nat. Rev. Mol. Cell Biol.
, vol.11
, pp. 208-219
-
-
Branzei, D.1
Foiani, M.2
-
2
-
-
0034595010
-
The importance of repairing stalled replication forks
-
Cox, M. M., and Goodman., M. F., Kreuzer, K. N., Sherratt, D. J., Sandler, S. J., and Marians, K. J. (2000) The importance of repairing stalled replication forks. Nature 404, 37-41
-
(2000)
Nature
, vol.404
, pp. 37-41
-
-
Cox, M.M.1
Goodman, M.F.2
Kreuzer, K.N.3
Sherratt, D.J.4
Sandler, S.J.5
Marians, K.J.6
-
3
-
-
34249936595
-
Minding the gap: The underground functions of BRCA1 and BRCA2 at stalled replication forks
-
Nagaraju, G., and Scully, R. (2007) Minding the gap: the underground functions of BRCA1 and BRCA2 at stalled replication forks. DNA Repair 6, 1018-1031
-
(2007)
DNA Repair
, vol.6
, pp. 1018-1031
-
-
Nagaraju, G.1
Scully, R.2
-
4
-
-
84926226900
-
Replication fork reversal in eukaryotes: From dead end to dynamic response
-
Neelsen, K. J., and Lopes, M. (2015) Replication fork reversal in eukaryotes: from dead end to dynamic response. Nat. Rev. Mol. Cell Biol. 16, 207-220
-
(2015)
Nat. Rev. Mol. Cell Biol.
, vol.16
, pp. 207-220
-
-
Neelsen, K.J.1
Lopes, M.2
-
5
-
-
84905446435
-
Recombination and replication
-
Syeda, A. H., Hawkins, M., and McGlynn, P. (2014) Recombination and replication. Cold Spring Harb. Perspect. Biol. 6, a016550
-
(2014)
Cold Spring Harb. Perspect. Biol.
, vol.6
-
-
Syeda, A.H.1
Hawkins, M.2
McGlynn, P.3
-
6
-
-
84891301320
-
Causes and consequences of replication stress
-
Zeman, M. K., and Cimprich, K. A. (2014) Causes and consequences of replication stress. Nat. Cell Biol. 16, 2-9
-
(2014)
Nat. Cell Biol.
, vol.16
, pp. 2-9
-
-
Zeman, M.K.1
Cimprich, K.A.2
-
7
-
-
84877150263
-
Rescuing stalled or damaged replication forks
-
Yeeles, J. T., Poli, J., Marians, K. J., and Pasero, P. (2013) Rescuing stalled or damaged replication forks. Cold Spring Harb. Perspect. Biol. 5, a012815
-
(2013)
Cold Spring Harb. Perspect. Biol.
, vol.5
-
-
Yeeles, J.T.1
Poli, J.2
Marians, K.J.3
Pasero, P.4
-
8
-
-
1942535774
-
Links between DNA replication and recombination in prokaryotes
-
McGlynn, P. (2004) Links between DNA replication and recombination in prokaryotes. Curr. Opin. Genet. Dev. 14, 107-112
-
(2004)
Curr. Opin. Genet. Dev.
, vol.14
, pp. 107-112
-
-
McGlynn, P.1
-
9
-
-
0036844340
-
Recombinational repair and restart of damaged replication forks
-
McGlynn, P., and Lloyd, R. G. (2002) Recombinational repair and restart of damaged replication forks. Nat. Rev. Mol. Cell Biol. 3, 859-870
-
(2002)
Nat. Rev. Mol. Cell Biol.
, vol.3
, pp. 859-870
-
-
McGlynn, P.1
Lloyd, R.G.2
-
10
-
-
67649862225
-
Replication fork reversal and the maintenance of genome stability
-
Atkinson, J., and McGlynn, P. (2009) Replication fork reversal and the maintenance of genome stability. Nucleic Acids Res. 37, 3475-3492
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 3475-3492
-
-
Atkinson, J.1
McGlynn, P.2
-
11
-
-
0035902608
-
Rescue of arrested replication forks by homologous recombination
-
Michel, B., and Flores., M. J., Viguera, E., Grompone, G., Seigneur, M., and Bidnenko, V. (2001) Rescue of arrested replication forks by homologous recombination. Proc. Natl. Acad. Sci. U.S.A. 98, 8181-8188
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, pp. 8181-8188
-
-
Michel, B.1
Flores, M.J.2
Viguera, E.3
Grompone, G.4
Seigneur, M.5
Bidnenko, V.6
-
12
-
-
4444267632
-
Multiple pathways process stalled replication forks
-
Michel, B., Grompone, G., Florès, M. J., and Bidnenko, V. (2004) Multiple pathways process stalled replication forks. Proc. Natl. Acad. Sci. U.S.A. 101, 12783-12788
-
(2004)
Proc. Natl. Acad. Sci. U.S.A.
, vol.101
, pp. 12783-12788
-
-
Michel, B.1
Grompone, G.2
Florès, M.J.3
Bidnenko, V.4
-
13
-
-
27144433837
-
Interplay between DNA replication and recombination in prokaryotes
-
Kreuzer, K. N. (2005) Interplay between DNA replication and recombination in prokaryotes. Annu. Rev. Microbiol. 59, 43-67
-
(2005)
Annu. Rev. Microbiol.
, vol.59
, pp. 43-67
-
-
Kreuzer, K.N.1
-
14
-
-
0035902579
-
DNA replication meets genetic exchange: Chromosomal damage and its repair by homologous recombination
-
Kuzminov, A. (2001) DNA replication meets genetic exchange: chromosomal damage and its repair by homologous recombination. Proc. Natl. Acad. Sci. U.S.A. 98, 8461-8468
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, pp. 8461-8468
-
-
Kuzminov, A.1
-
15
-
-
33845330910
-
Replisome assembly and the direct restart of stalled replication forks
-
Heller, R. C., and Marians, K. J. (2006) Replisome assembly and the direct restart of stalled replication forks. Nat. Rev. Mol. Cell Biol. 7, 932-943
-
(2006)
Nat. Rev. Mol. Cell Biol.
, vol.7
, pp. 932-943
-
-
Heller, R.C.1
Marians, K.J.2
-
16
-
-
0034737294
-
Modulation of RNA polymerase by (p)ppGpp reveals a RecG-dependent mechanism for replication fork progression
-
McGlynn, P., and Lloyd, R. G. (2000) Modulation of RNA polymerase by (p)ppGpp reveals a RecG-dependent mechanism for replication fork progression. Cell 101, 35-45
-
(2000)
Cell
, vol.101
, pp. 35-45
-
-
McGlynn, P.1
Lloyd, R.G.2
-
17
-
-
0035902591
-
Rescue of stalled replication forks by RecG: Simultaneous translocation on the leading and lagging strand templates supports an active DNA unwinding model of fork reversal and holliday junction formation
-
McGlynn, P., and Lloyd, R. G. (2001) Rescue of stalled replication forks by RecG: simultaneous translocation on the leading and lagging strand templates supports an active DNA unwinding model of fork reversal and Holliday junction formation. Proc. Natl. Acad. Sci. U.S.A. 98, 8227-8234
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, pp. 8227-8234
-
-
McGlynn, P.1
Lloyd, R.G.2
-
18
-
-
0035902573
-
Formation of holliday junctions by regression of nascent DNA in intermediates containing stalled replication forks: RecG stimulates regression even when the DNA is negatively supercoiled
-
McGlynn, P., and Lloyd., R. G., and Marians, K. J. (2001) Formation of Holliday junctions by regression of nascent DNA in intermediates containing stalled replication forks: RecG stimulates regression even when the DNA is negatively supercoiled. Proc. Natl. Acad. Sci. U.S.A. 98, 8235-8240
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, pp. 8235-8240
-
-
McGlynn, P.1
Lloyd, R.G.2
Marians, K.J.3
-
19
-
-
33847306350
-
Characterization of the ATPase activity of the Escherichia coli RecG protein reveals that the preferred cofactor is negatively supercoiled DNA
-
Slocum, S. L., and Buss., J. A., Kimura, Y., and Bianco, P. R. (2007) Characterization of the ATPase activity of the Escherichia coli RecG protein reveals that the preferred cofactor is negatively supercoiled DNA. J. Mol. Biol. 367, 647-664
-
(2007)
J. Mol. Biol.
, vol.367
, pp. 647-664
-
-
Slocum, S.L.1
Buss, J.A.2
Kimura, Y.3
Bianco, P.R.4
-
20
-
-
84938952129
-
I came to a fork in the DNA and there was RecG
-
Bianco, P. R. (2015) I came to a fork in the DNA and there was RecG. Prog. Biophys. Mol. Biol. 117, 166-173
-
(2015)
Prog. Biophys. Mol. Biol.
, vol.117
, pp. 166-173
-
-
Bianco, P.R.1
-
21
-
-
0035834755
-
Action of RuvAB at replication fork structures
-
McGlynn, P., and Lloyd, R. G. (2001) Action of RuvAB at replication fork structures. J. Biol. Chem. 276, 41938-41944
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 41938-41944
-
-
McGlynn, P.1
Lloyd, R.G.2
-
22
-
-
84907855210
-
Regression of replication forks stalled by leading-strand template damage: I. Both RecG and RuvAB catalyze regression, but RuvC cleaves the holliday junctions formed by RecG preferentially
-
Gupta, S., and Yeeles., J. T., and Marians, K. J. (2014) Regression of replication forks stalled by leading-strand template damage: I. Both RecG and RuvAB catalyze regression, but RuvC cleaves the Holliday junctions formed by RecG preferentially. J. Biol. Chem. 289, 28376-28387
-
(2014)
J. Biol. Chem.
, vol.289
, pp. 28376-28387
-
-
Gupta, S.1
Yeeles, J.T.2
Marians, K.J.3
-
23
-
-
84884193802
-
Characterization of the ATPase activity of RecG and RuvAB proteins on model fork structures reveals insight into stalled DNA replication fork repair
-
Abd Wahab, S., Choi, M., and Bianco, P. R. (2013) Characterization of the ATPase activity of RecG and RuvAB proteins on model fork structures reveals insight into stalled DNA replication fork repair. J. Biol. Chem. 288, 26397-26409
-
(2013)
J. Biol. Chem.
, vol.288
, pp. 26397-26409
-
-
Abd Wahab, S.1
Choi, M.2
Bianco, P.R.3
-
24
-
-
0025924538
-
Genetic analysis of the recG locus of Escherichia coli K-12 and of its role in recombination and DNA repair
-
Lloyd, R. G., and Buckman, C. (1991) Genetic analysis of the recG locus of Escherichia coli K-12 and of its role in recombination and DNA repair. J. Bacteriol. 173, 1004-1011
-
(1991)
J. Bacteriol.
, vol.173
, pp. 1004-1011
-
-
Lloyd, R.G.1
Buckman, C.2
-
25
-
-
0026009412
-
Conjugational recombination in resolvase-deficient ruvC mutants of Escherichia coli K-12 depends on recG
-
Lloyd, R. G. (1991) Conjugational recombination in resolvase-deficient ruvC mutants of Escherichia coli K-12 depends on recG. J. Bacteriol. 173, 5414-5418
-
(1991)
J. Bacteriol.
, vol.173
, pp. 5414-5418
-
-
Lloyd, R.G.1
-
26
-
-
2442489945
-
RuvAB and RecG are not essential for the recovery of DNA synthesis following UV-induced DNA damage in Escherichia coli
-
Donaldson, J. R., and Courcelle., C. T., and Courcelle, J. (2004) RuvAB and RecG are not essential for the recovery of DNA synthesis following UV-induced DNA damage in Escherichia coli. Genetics 166, 1631-1640
-
(2004)
Genetics
, vol.166
, pp. 1631-1640
-
-
Donaldson, J.R.1
Courcelle, C.T.2
Courcelle, J.3
-
27
-
-
76749090152
-
Is RecG a general guardian of the bacterial genome?
-
Rudolph, C. J., and Upton., A. L., Briggs, G. S., and Lloyd, R. G. (2010) Is RecG a general guardian of the bacterial genome? DNA Repair 9, 210-223
-
(2010)
DNA Repair
, vol.9
, pp. 210-223
-
-
Rudolph, C.J.1
Upton, A.L.2
Briggs, G.S.3
Lloyd, R.G.4
-
28
-
-
0028102267
-
Biochemistry of homologous recombination in Escherichia coli
-
Kowalczykowski, S. C., and Dixon., D. A., Eggleston, A. K., Lauder, S. D., and Rehrauer, W. M. (1994) Biochemistry of homologous recombination in Escherichia coli. Microbiol. Rev. 58, 401-465
-
(1994)
Microbiol. Rev.
, vol.58
, pp. 401-465
-
-
Kowalczykowski, S.C.1
Dixon, D.A.2
Eggleston, A.K.3
Lauder, S.D.4
Rehrauer, W.M.5
-
29
-
-
0032605682
-
Recombinational DNA repair in bacteria and the RecA protein
-
Cox, M. M. (1999) Recombinational DNA repair in bacteria and the RecA protein. Prog. Nucleic Acid Res. Mol. Biol. 63, 311-366
-
(1999)
Prog. Nucleic Acid Res. Mol. Biol.
, vol.63
, pp. 311-366
-
-
Cox, M.M.1
-
30
-
-
33847778234
-
Motoring along with the bacterial RecA protein
-
Cox, M. M. (2007) Motoring along with the bacterial RecA protein. Nat. Rev. Mol. Cell Biol. 8, 127-138
-
(2007)
Nat. Rev. Mol. Cell Biol.
, vol.8
, pp. 127-138
-
-
Cox, M.M.1
-
31
-
-
0038700698
-
Molecular views of recombination proteins and their control
-
West, S. C. (2003) Molecular views of recombination proteins and their control. Nat. Rev. Mol. Cell Biol. 4, 435-445
-
(2003)
Nat. Rev. Mol. Cell Biol.
, vol.4
, pp. 435-445
-
-
West, S.C.1
-
32
-
-
0242384946
-
Rad51 recombinase and recombination mediators
-
Sung, P., Krejci, L., Van Komen, S., and Sehorn, M. G. (2003) Rad51 recombinase and recombination mediators. J. Biol. Chem. 278, 42729-42732
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 42729-42732
-
-
Sung, P.1
Krejci, L.2
Van Komen, S.3
Sehorn, M.G.4
-
33
-
-
33749037701
-
Mechanism of homologous recombination: Mediators and helicases take on regulatory functions
-
Sung, P., and Klein, H. (2006) Mechanism of homologous recombination: mediators and helicases take on regulatory functions. Nat. Rev. Mol. Cell Biol. 7, 739-750
-
(2006)
Nat. Rev. Mol. Cell Biol.
, vol.7
, pp. 739-750
-
-
Sung, P.1
Klein, H.2
-
34
-
-
33744950933
-
Recombination mediator and rad51 targeting activities of a human BRCA2 polypeptide
-
San Filippo, J., Chi, P., and Sehorn., M. G., Etchin, J., Krejci, L., and Sung, P. (2006) Recombination mediator and Rad51 targeting activities of a human BRCA2 polypeptide. J. Biol. Chem. 281, 11649-11657
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 11649-11657
-
-
San Filippo, J.1
Chi, P.2
Sehorn, M.G.3
Etchin, J.4
Krejci, L.5
Sung, P.6
-
35
-
-
78649778694
-
RAD51C: A novel cancer susceptibility gene is linked to fanconi anemia and breast cancer
-
Somyajit, K., Subramanya, S., and Nagaraju, G. (2010) RAD51C: a novel cancer susceptibility gene is linked to Fanconi anemia and breast cancer. Carcinogenesis 31, 2031-2038
-
(2010)
Carcinogenesis
, vol.31
, pp. 2031-2038
-
-
Somyajit, K.1
Subramanya, S.2
Nagaraju, G.3
-
36
-
-
0041819759
-
Mycobacterium smegmatis RecA protein is structurally similar to but functionally distinct from mycobacterium tuberculosis RecA
-
Ganesh, N, and Muniyappa, K. (2003) Mycobacterium smegmatis RecA protein is structurally similar to but functionally distinct from Mycobacterium tuberculosis RecA. Proteins 53, 6-17
-
(2003)
Proteins
, vol.53
, pp. 6-17
-
-
Ganesh, N.1
Muniyappa, K.2
-
37
-
-
0038470002
-
Characterization of DNA strand transfer promoted by mycobacterium smegmatis RecA reveals functional diversity with mycobacterium tuberculosis RecA
-
Ganesh, N, and Muniyappa, K. (2003) Characterization of DNA strand transfer promoted by Mycobacterium smegmatis RecA reveals functional diversity with Mycobacterium tuberculosis RecA. Biochemistry 42, 7216-7225
-
(2003)
Biochemistry
, vol.42
, pp. 7216-7225
-
-
Ganesh, N.1
Muniyappa, K.2
-
38
-
-
0032715175
-
Recombinational repair of DNA damage in Escherichia coli and bacteriophage X
-
Kuzminov, A. (1999) Recombinational repair of DNA damage in Escherichia coli and bacteriophage X. Microbiol. Mol. Biol. Rev. 63, 751-813
-
(1999)
Microbiol. Mol. Biol. Rev.
, vol.63
, pp. 751-813
-
-
Kuzminov, A.1
-
39
-
-
0037436108
-
DNA damage-induced replication fork regression and processing in Escherichia coli
-
Courcelle, J., and Donaldson., J. R., Chow, K. H., and Courcelle, C. T. (2003) DNA damage-induced replication fork regression and processing in Escherichia coli. Science 299, 1064-1067
-
(2003)
Science
, vol.299
, pp. 1064-1067
-
-
Courcelle, J.1
Donaldson, J.R.2
Chow, K.H.3
Courcelle, C.T.4
-
40
-
-
0033710452
-
RuvABC-dependent double-strand breaks in dnaBts mutants require recA
-
Seigneur, M., and Ehrlich., S. D., and Michel, B. (2000) RuvABC-dependent double-strand breaks in dnaBts mutants require recA. Mol. Microbiol. 38, 565-574
-
(2000)
Mol. Microbiol.
, vol.38
, pp. 565-574
-
-
Seigneur, M.1
Ehrlich, S.D.2
Michel, B.3
-
41
-
-
0035902453
-
RecA protein promotes the regression of stalled replication forks in vitro
-
Robu, M. E., and Inman., R. B., and Cox, M. M. (2001) RecA protein promotes the regression of stalled replication forks in vitro. Proc. Natl. Acad. Sci. U.S.A. 98, 8211-8218
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, pp. 8211-8218
-
-
Robu, M.E.1
Inman, R.B.2
Cox, M.M.3
-
42
-
-
34249938016
-
Recombination proteins and rescue of arrested replication forks
-
Michel, B., Boubakri, H., Baharoglu, Z., LeMasson, M., and Lestini, R. (2007) Recombination proteins and rescue of arrested replication forks. DNA Repair 6, 967-980
-
(2007)
DNA Repair
, vol.6
, pp. 967-980
-
-
Michel, B.1
Boubakri, H.2
Baharoglu, Z.3
LeMasson, M.4
Lestini, R.5
-
43
-
-
84907833687
-
Regression of replication forks stalled by leading-strand template damage: II. Regression by RecA is inhibited by SSB
-
Gupta, S., and Yeeles., J. T., and Marians, K. J. (2014) Regression of replication forks stalled by leading-strand template damage: II. Regression by RecA is inhibited by SSB. J. Biol. Chem. 289, 28388-28398
-
(2014)
J. Biol. Chem.
, vol.289
, pp. 28388-28398
-
-
Gupta, S.1
Yeeles, J.T.2
Marians, K.J.3
-
44
-
-
84861199764
-
Global tuberculosis control: Lessons learnt and future prospects
-
Lienhardt, C, Glaziou, P., Uplekar, M., Lönnroth, K., Getahun, H., and Raviglione, M. (2012) Global tuberculosis control: lessons learnt and future prospects. Nat. Rev. Microbiol. 10, 407-416
-
(2012)
Nat. Rev. Microbiol.
, vol.10
, pp. 407-416
-
-
Lienhardt, C.1
Glaziou, P.2
Uplekar, M.3
Lönnroth, K.4
Getahun, H.5
Raviglione, M.6
-
45
-
-
0034255209
-
Reactive oxygen and nitrogen intermediates in the relationship between Mammalian hosts and microbial pathogens
-
Nathan, C, and Shiloh, M. U. (2000) Reactive oxygen and nitrogen intermediates in the relationship between mammalian hosts and microbial pathogens. Proc. Natl. Acad. Sci. U.S.A. 97, 8841-8848
-
(2000)
Proc. Natl. Acad. Sci. U.S.A.
, vol.97
, pp. 8841-8848
-
-
Nathan, C.1
Shiloh, M.U.2
-
46
-
-
33746493349
-
Tuberculosis chemotherapy: The influence of bacillary stress and damage response pathways on drug efficacy
-
Warner, D. F., and Mizrahi, V. (2006) Tuberculosis chemotherapy: the influence of bacillary stress and damage response pathways on drug efficacy. Clin. Microbiol. Rev. 19, 558-570
-
(2006)
Clin. Microbiol. Rev.
, vol.19
, pp. 558-570
-
-
Warner, D.F.1
Mizrahi, V.2
-
47
-
-
80755128334
-
Base excision and nucleotide excision repair pathways in mycobacteria
-
Kurthkoti, K., and Varshney, U. (2011) Base excision and nucleotide excision repair pathways in mycobacteria. Tuberculosis 91, 533-543
-
(2011)
Tuberculosis
, vol.91
, pp. 533-543
-
-
Kurthkoti, K.1
Varshney, U.2
-
48
-
-
84860734902
-
Distinct mechanisms of DNA repair in mycobacteria and their implications in attenuation of the pathogen growth
-
Kurthkoti, K., and Varshney, U. (2012) Distinct mechanisms of DNA repair in mycobacteria and their implications in attenuation of the pathogen growth. Mech. Ageing Dev. 133, 138-146
-
(2012)
Mech. Ageing Dev.
, vol.133
, pp. 138-146
-
-
Kurthkoti, K.1
Varshney, U.2
-
49
-
-
33745121203
-
Genomewide prediction of G4 DNA as regulatory motifs: Role in Escherichia coli global regulation
-
Rawal, P., and Kummarasetti., V. B., Ravindran, J., Kumar, N., Halder, K., Sharma, R., Mukerji, M., Das, S. K., and Chowdhury, S. (2006) Genomewide prediction of G4 DNA as regulatory motifs: role in Escherichia coli global regulation. Genome Res. 16, 644-655
-
(2006)
Genome Res.
, vol.16
, pp. 644-655
-
-
Rawal, P.1
Kummarasetti, V.B.2
Ravindran, J.3
Kumar, N.4
Halder, K.5
Sharma, R.6
Mukerji, M.7
Das, S.K.8
Chowdhury, S.9
-
50
-
-
84906968831
-
Mycobacterium tuberculosis din G is a structure-specific helicase that unwinds G4 DNA: Implications for targeting G4 DNA as a novel therapeutic approach
-
Thakur, R. S., Desingu, A., Basavaraju, S., Subramanya, S., and Rao., D. N., and Nagaraju, G. (2014) Mycobacterium tuberculosis Din G is a structure-specific helicase that unwinds G4 DNA: implications for targeting G4 DNA as a novel therapeutic approach. J. Biol. Chem. 289, 25112-25136
-
(2014)
J. Biol. Chem.
, vol.289
, pp. 25112-25136
-
-
Thakur, R.S.1
Desingu, A.2
Basavaraju, S.3
Subramanya, S.4
Rao, D.N.5
Nagaraju, G.6
-
51
-
-
0033832425
-
Comparative genomics of mycobacterium tuberculosis and Escherichia coli for recombination (rec) genes
-
Muniyappa, K., and Vaze., M. B., Ganesh, N, Sreedhar Reddy, M., Guhan, N, and Venkatesh, R. (2000) Comparative genomics of Mycobacterium tuberculosis and Escherichia coli for recombination (rec) genes. Microbiology 146, 2093-2095
-
(2000)
Microbiology
, vol.146
, pp. 2093-2095
-
-
Muniyappa, K.1
Vaze, M.B.2
Ganesh, N.3
Sreedhar Reddy, M.4
Guhan, N.5
Venkatesh, R.6
-
52
-
-
64349114440
-
Genome dynamics in major bacterial pathogens
-
Ambur, O. H., Davidsen, T., Frye, S. A., Balasingham, S. V., Lagesen, K., Rognes, T., and Tønjum, T. (2009) Genome dynamics in major bacterial pathogens. FEMS Microbiol. Rev. 33, 453-470
-
(2009)
FEMS Microbiol. Rev.
, vol.33
, pp. 453-470
-
-
Ambur, O.H.1
Davidsen, T.2
Frye, S.A.3
Balasingham, S.V.4
Lagesen, K.5
Rognes, T.6
Tønjum, T.7
-
53
-
-
84876294656
-
Evidence for the role of mycobacterium tuberculosis RecG helicase in DNA repair and recombination
-
Thakur, R. S., Basavaraju, S., Somyajit, K., Jain, A., Subramanya, S., Muniyappa, K., and Nagaraju, G. (2013) Evidence for the role of Mycobacterium tuberculosis RecG helicase in DNA repair and recombination. FEBS J. 280, 1841-1860
-
(2013)
FEBS J.
, vol.280
, pp. 1841-1860
-
-
Thakur, R.S.1
Basavaraju, S.2
Somyajit, K.3
Jain, A.4
Subramanya, S.5
Muniyappa, K.6
Nagaraju, G.7
-
54
-
-
84855481783
-
Functional analysis of DNA replication fork reversal catalyzed by mycobacterium tuberculosis RuvAB proteins
-
Khanduja, J. S., and Muniyappa, K. (2012) Functional analysis of DNA replication fork reversal catalyzed by Mycobacterium tuberculosis RuvAB proteins. J. Biol. Chem. 287, 1345-1360
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 1345-1360
-
-
Khanduja, J.S.1
Muniyappa, K.2
-
55
-
-
58549087167
-
Mycobacterium tuberculosis RuvA induces two distinct types of structural distortions between the homologous and heterologous holliday junctions
-
Khanduja, J. S., Tripathi, P., and Muniyappa, K. (2009) Mycobacterium tuberculosis RuvA induces two distinct types of structural distortions between the homologous and heterologous Holliday junctions. Biochemistry 48, 27-40
-
(2009)
Biochemistry
, vol.48
, pp. 27-40
-
-
Khanduja, J.S.1
Tripathi, P.2
Muniyappa, K.3
-
56
-
-
0030029470
-
Functional characterization of the precursor and spliced forms of RecA protein of mycobacterium tuberculosis
-
Kumar, R. A., and Vaze., M. B., Chandra, N. R., Vijayan, M., and Muniyappa, K. (1996) Functional characterization of the precursor and spliced forms of RecA protein of Mycobacterium tuberculosis. Biochemistry 35, 1793-1802
-
(1996)
Biochemistry
, vol.35
, pp. 1793-1802
-
-
Kumar, R.A.1
Vaze, M.B.2
Chandra, N.R.3
Vijayan, M.4
Muniyappa, K.5
-
57
-
-
0022493915
-
Large-scale overproduction and rapid purification of the Escherichia coli ssb gene product. Expression of the ssb gene under À PL control
-
Lohman, T. M., and Green., J. M., and Beyer, R. S. (1986) Large-scale overproduction and rapid purification of the Escherichia coli ssb gene product. Expression of the ssb gene under À PL control. Biochemistry 25, 21-25
-
(1986)
Biochemistry
, vol.25
, pp. 21-25
-
-
Lohman, T.M.1
Green, J.M.2
Beyer, R.S.3
-
58
-
-
0035824667
-
Characterization of single-stranded DNA-binding proteins from mycobacteria. The carboxylterminal of domain of SSB is essential for stable association with its cognate RecA protein
-
Reddy, M. S., Guhan, N., and Muniyappa, K. (2001) Characterization of single-stranded DNA-binding proteins from mycobacteria. The carboxylterminal of domain of SSB is essential for stable association with its cognate RecA protein. J. Biol. Chem. 276, 45959-45968
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 45959-45968
-
-
Reddy, M.S.1
Guhan, N.2
Muniyappa, K.3
-
59
-
-
11344267268
-
Type II restriction endonuclease R. KpnI is a member of the HNH nuclease superfamily
-
Saravanan, M., and Bujnicki., J. M., Cymerman, I. A., Rao, D. N., and Nagaraja, V. (2004) Type II restriction endonuclease R. KpnI is a member of the HNH nuclease superfamily. Nucleic Acids Res. 32, 6129-6135
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 6129-6135
-
-
Saravanan, M.1
Bujnicki, J.M.2
Cymerman, I.A.3
Rao, D.N.4
Nagaraja, V.5
-
60
-
-
79953693899
-
Cooperation of RAD51 and RAD54 in regression of a model replication fork
-
Bugreev, D. V., and Rossi., M. J., and Mazin, A. V. (2011) Cooperation of RAD51 and RAD54 in regression of a model replication fork. Nucleic Acids Res. 39, 2153-2164
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 2153-2164
-
-
Bugreev, D.V.1
Rossi, M.J.2
Mazin, A.V.3
-
61
-
-
33747352774
-
The bloom's syndrome helicase can promote the regression of a model replication fork
-
Ralf, C, and Hickson., I. D., and Wu, L. (2006) The Bloom's syndrome helicase can promote the regression of a model replication fork. J. Biol. Chem. 281, 22839-22846
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 22839-22846
-
-
Ralf, C.1
Hickson, I.D.2
Wu, L.3
-
62
-
-
84870207299
-
Direct observation of stalled fork restart via fork regression in the T4 replication system
-
Manosas, M., and Perumal., S. K., Croquette, V., and Benkovic, S. J. (2012) Direct observation of stalled fork restart via fork regression in the T4 replication system. Science 338, 1217-1220
-
(2012)
Science
, vol.338
, pp. 1217-1220
-
-
Manosas, M.1
Perumal, S.K.2
Croquette, V.3
Benkovic, S.J.4
-
63
-
-
0030908093
-
Replication protein A: A heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism
-
Wold, M. S. (1997) Replication protein A: a heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism. Annu. Rev. Biochem. 66, 61-92
-
(1997)
Annu. Rev. Biochem.
, vol.66
, pp. 61-92
-
-
Wold, M.S.1
-
64
-
-
33749134033
-
A dynamic model for replication protein A (RPA) function in DNA processing pathways
-
Fanning, E., Klimovich, V., and Nager, A. R. (2006) A dynamic model for replication protein A (RPA) function in DNA processing pathways. Nucleic Acids Res. 34, 4126-4137
-
(2006)
Nucleic Acids Res.
, vol.34
, pp. 4126-4137
-
-
Fanning, E.1
Klimovich, V.2
Nager, A.R.3
-
65
-
-
34147224324
-
The single-stranded DNA-binding protein of Escherichia coli
-
Meyer, R. R., and Laine, P. S. (1990) The single-stranded DNA-binding protein of Escherichia coli. Microbiol. Rev. 54, 342-380
-
(1990)
Microbiol. Rev.
, vol.54
, pp. 342-380
-
-
Meyer, R.R.1
Laine, P.S.2
-
66
-
-
84904489169
-
Novel function of the fanconi anemia group J or RECQ1 helicase to disrupt protein-DNA complexes in a replication protein A-stimulated manner
-
Sommers, J. A., Banerjee, T., Hinds, T., Wan, B., and Wold., M. S., Lei, M., and Brosh, R. M., Jr. (2014) Novel function of the Fanconi anemia group J or RECQ1 helicase to disrupt protein-DNA complexes in a replication protein A-stimulated manner. J. Biol. Chem. 289, 19928-19941
-
(2014)
J. Biol. Chem.
, vol.289
, pp. 19928-19941
-
-
Sommers, J.A.1
Banerjee, T.2
Hinds, T.3
Wan, B.4
Wold, M.S.5
Lei, M.6
Brosh Jr, . R.M.7
-
67
-
-
0035679232
-
Recombinational DNA repair of damaged replication forks in Escherichia coli: Questions
-
Cox, M. M. (2001) Recombinational DNA repair of damaged replication forks in Escherichia coli: questions. Annu. Rev. Genet. 35, 53-82
-
(2001)
Annu. Rev. Genet.
, vol.35
, pp. 53-82
-
-
Cox, M.M.1
-
68
-
-
0026777126
-
Prokaryotic DNA replication
-
Marians, K. J. (1992) Prokaryotic DNA replication. Annu. Rev. Biochem. 61, 673-719
-
(1992)
Annu. Rev. Biochem.
, vol.61
, pp. 673-719
-
-
Marians, K.J.1
-
69
-
-
84893419846
-
RecG and UvsW catalyse robust DNA rewinding critical for stalled DNA replication fork rescue
-
Manosas, M., and Perumal., S. K., Bianco, P. R., Bianco, P., Ritort, F., and Benkovic., S. J., and Croquette, V. (2013) RecG and UvsW catalyse robust DNA rewinding critical for stalled DNA replication fork rescue. Nat. Commun. 4, 2368
-
(2013)
Nat. Commun.
, vol.4
, pp. 2368
-
-
Manosas, M.1
Perumal, S.K.2
Bianco, P.R.3
Bianco, P.4
Ritort, F.5
Benkovic, S.J.6
Croquette, V.7
-
70
-
-
0035812836
-
Structural analysis of DNA replication fork reversal by RecG
-
Singleton, M. R., Scaife, S., and Wigley, D. B. (2001) Structural analysis of DNA replication fork reversal by RecG. Cell 107, 79-89
-
(2001)
Cell
, vol.107
, pp. 79-89
-
-
Singleton, M.R.1
Scaife, S.2
Wigley, D.B.3
-
71
-
-
0037415719
-
A model for dsDNA translocation revealed by a structural motif common to RecG and mfd proteins
-
Mahdi, A. A., and Briggs., G. S., Sharples, G. J., Wen, Q., and Lloyd, R. G. (2003) A model for dsDNA translocation revealed by a structural motif common to RecG and Mfd proteins. EMBO J. 22, 724-734
-
(2003)
EMBO J.
, vol.22
, pp. 724-734
-
-
Mahdi, A.A.1
Briggs, G.S.2
Sharples, G.J.3
Wen, Q.4
Lloyd, R.G.5
-
72
-
-
32544441919
-
RuvAB is essential for replication forks reversal in certain replication mutants
-
Baharoglu, Z., Petranovic, M., Flores, M. J., and Michel, B. (2006) RuvAB is essential for replication forks reversal in certain replication mutants. EMBO J. 25, 596-604
-
(2006)
EMBO J.
, vol.25
, pp. 596-604
-
-
Baharoglu, Z.1
Petranovic, M.2
Flores, M.J.3
Michel, B.4
-
73
-
-
41949084372
-
ruvA mutants that resolve holliday junctions but do not reverse replication forks
-
Baharoglu, Z., and Bradley., A. S., Le Masson, M., Tsaneva, I., and Michel, B. (2008) ruvA mutants that resolve Holliday junctions but do not reverse replication forks. PLoS Genet. 4, e1000012
-
(2008)
PLoS Genet.
, vol.4
-
-
Baharoglu, Z.1
Bradley, A.S.2
Le Masson, M.3
Tsaneva, I.4
Michel, B.5
-
74
-
-
52649167880
-
ruvA and ruvB mutants specifically impaired for replication fork reversal
-
Le Masson, M., Baharoglu, Z., and Michel, B. (2008) ruvA and ruvB mutants specifically impaired for replication fork reversal. Mol. Microbiol. 70, 537-548
-
(2008)
Mol. Microbiol.
, vol.70
, pp. 537-548
-
-
Le Masson, M.1
Baharoglu, Z.2
Michel, B.3
-
75
-
-
0025790082
-
Molecular organization and nucleotide sequence of the recG locus of Escherichia coli K-12
-
Lloyd, R. G., and Sharples, G. J. (1991) Molecular organization and nucleotide sequence of the recG locus of Escherichia coli K-12. J. Bacteriol. 173, 6837-6843
-
(1991)
J. Bacteriol.
, vol.173
, pp. 6837-6843
-
-
Lloyd, R.G.1
Sharples, G.J.2
-
76
-
-
0020024650
-
Damage to DNA induces expression of the ruv gene of Escherichia coli
-
Shurvinton, C. E., and Lloyd, R. G. (1982) Damage to DNA induces expression of the ruv gene of Escherichia coli. Mol. Gen. Genet. 185, 352-355
-
(1982)
Mol. Gen. Genet.
, vol.185
, pp. 352-355
-
-
Shurvinton, C.E.1
Lloyd, R.G.2
-
77
-
-
0031453378
-
Processing of recombination intermediates by the ruv-ABC proteins
-
West, S. C. (1997) Processing of recombination intermediates by the Ruv-ABC proteins. Annu. Rev. Genet. 31, 213-244
-
(1997)
Annu. Rev. Genet.
, vol.31
, pp. 213-244
-
-
West, S.C.1
-
78
-
-
0032536901
-
Functional interactions between the holliday junction resolvase and the branch migration motor of Escherichia coli
-
van Gool, A. J., Shah, R., Mézard, C., and West, S. C. (1998) Functional interactions between the Holliday junction resolvase and the branch migration motor of Escherichia coli. EMBO J. 17, 1838-1845
-
(1998)
EMBO J.
, vol.17
, pp. 1838-1845
-
-
Van Gool, A.J.1
Shah, R.2
Mézard, C.3
West, S.C.4
-
79
-
-
0030727120
-
In vitro reconstitution of the late steps of genetic recombination in E. Coli
-
Eggleston, A. K., and Mitchell., A. H., and West, S. C. (1997) In vitro reconstitution of the late steps of genetic recombination in E. coli. Cell 89, 607-617
-
(1997)
Cell
, vol.89
, pp. 607-617
-
-
Eggleston, A.K.1
Mitchell, A.H.2
West, S.C.3
-
80
-
-
0043142536
-
Transcriptional adaptation of mycobacterium tuberculosis within macrophages: Insights into the phagosomal environment
-
Schnappinger, D., Ehrt, S., Voskuil, M. I., Liu, Y., Mangan, J. A., Monahan, I. M., Dolganov, G., Efron, B., and Butcher., P. D., Nathan, C., and Schoolnik, G. K. (2003) Transcriptional adaptation of Mycobacterium tuberculosis within macrophages: insights into the phagosomal environment. J. Exp. Med. 198, 693-704
-
(2003)
J. Exp. Med.
, vol.198
, pp. 693-704
-
-
Schnappinger, D.1
Ehrt, S.2
Voskuil, M.I.3
Liu, Y.4
Mangan, J.A.5
Monahan, I.M.6
Dolganov, G.7
Efron, B.8
Butcher, P.D.9
Nathan, C.10
Schoolnik, G.K.11
-
81
-
-
31844441997
-
Unique transcriptome signature of mycobacterium tuberculosisin pulmonary tuberculosis
-
Rachman, H., Strong, M., Ulrichs, T., Grode, L., Schuchhardt, J., Mollenkopf, H., Kosmiadi, G. A., Eisenberg, D., and Kaufmann, S. H. (2006) Unique transcriptome signature of Mycobacterium tuberculosisin pulmonary tuberculosis. Infect. Immun. 74, 1233-1242
-
(2006)
Infect. Immun.
, vol.74
, pp. 1233-1242
-
-
Rachman, H.1
Strong, M.2
Ulrichs, T.3
Grode, L.4
Schuchhardt, J.5
Mollenkopf, H.6
Kosmiadi, G.A.7
Eisenberg, D.8
Kaufmann, S.H.9
-
82
-
-
84879796452
-
Substrate-selective repair and restart of replication forks by DNA translocases
-
Bétous, R., and Couch., F. B., Mason, A. C., Eichman, B. F., Manosas, M., and Cortez, D. (2013) Substrate-selective repair and restart of replication forks by DNA translocases. Cell Rep. 3, 1958-1969
-
(2013)
Cell Rep.
, vol.3
, pp. 1958-1969
-
-
Bétous, R.1
Couch, F.B.2
Mason, A.C.3
Eichman, B.F.4
Manosas, M.5
Cortez, D.6
-
83
-
-
58749113648
-
RecG interacts directly with SSB: Implications for stalled replication fork regression
-
Buss, J.A., Kimura, Y., and Bianco, P. R. (2008) RecG interacts directly with SSB: implications for stalled replication fork regression. Nucleic Acids Res. 36, 7029-7042
-
(2008)
Nucleic Acids Res.
, vol.36
, pp. 7029-7042
-
-
Buss, J.A.1
Kimura, Y.2
Bianco, P.R.3
-
84
-
-
84928967106
-
Remodeling of RecG helicase at the DNA replication fork by SSB protein
-
Sun, Z., and Tan., H. Y., Bianco, P.R., and Lyubchenko, Y.L. (2015) Remodeling of RecG helicase at the DNA replication fork by SSB protein. Sci. Rep. 5, 9625
-
(2015)
Sci. Rep.
, vol.5
, pp. 9625
-
-
Sun, Z.1
Tan, H.Y.2
Bianco, P.R.3
Lyubchenko, Y.L.4
-
85
-
-
0035808456
-
Biochemical characterization of the DNA helicase activity of the Escherichia coli RecQ helicase
-
Harmon, F. G., and Kowalczykowski, S. C. (2001) Biochemical characterization of the DNA helicase activity of the Escherichia coli RecQ helicase. J. Biol. Chem. 276, 232-243
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 232-243
-
-
Harmon, F.G.1
Kowalczykowski, S.C.2
-
86
-
-
26644472197
-
Unwinding of the nascent lagging strand by rep and PriA enables the direct restart of stalled replication forks
-
Heller, R. C., and Marians, K. J. (2005) Unwinding of the nascent lagging strand by Rep and PriA enables the direct restart of stalled replication forks. J. Biol. Chem. 280, 34143-34151
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 34143-34151
-
-
Heller, R.C.1
Marians, K.J.2
-
87
-
-
0027438781
-
Reverse branch migration of holliday junctions by RecG protein: A new mechanism for resolution of intermediates in recombination and DNA repair
-
Whitby, M.C., Ryder, L., and Lloyd, R.G. (1993) Reverse branch migration of Holliday junctions by RecG protein: a new mechanism for resolution of intermediates in recombination and DNA repair. Cell 75, 341-350
-
(1993)
Cell
, vol.75
, pp. 341-350
-
-
Whitby, M.C.1
Ryder, L.2
Lloyd, R.G.3
-
88
-
-
84875220657
-
Human RECQ1 promotes restart of replication forks reversed by DNA topoisomerase I inhibition
-
Berti, M., Ray Chaudhuri, A., Thangavel, S., Gomathinayagam, S., Kenig, S., Vujanovic, M., Odreman, F., Glatter, T., Graziano, S., Mendoza-Maldonado, R., Marino, F., Lucic, B., Biasin, V., Gstaiger, M., Aebersold, R., et al. (2013) Human RECQ1 promotes restart of replication forks reversed by DNA topoisomerase I inhibition. Nat. Struct. Mol. Biol. 20, 347-354
-
(2013)
Nat. Struct. Mol. Biol.
, vol.20
, pp. 347-354
-
-
Berti, M.1
Ray Chaudhuri, A.2
Thangavel, S.3
Gomathinayagam, S.4
Kenig, S.5
Vujanovic, M.6
Odreman, F.7
Glatter, T.8
Graziano, S.9
Mendoza-Maldonado, R.10
Marino, F.11
Lucic, B.12
Biasin, V.13
Gstaiger, M.14
Aebersold, R.15
-
89
-
-
67650164516
-
Mycobacterial survival strategies in the phagosome: Defence against host stresses
-
Ehrt, S., and Schnappinger, D. (2009) Mycobacterial survival strategies in the phagosome: defence against host stresses. Cell. Microbiol. 11, 1170-1178
-
(2009)
Cell. Microbiol.
, vol.11
, pp. 1170-1178
-
-
Ehrt, S.1
Schnappinger, D.2
-
90
-
-
77956223304
-
DNA repair systems and the pathogenesis of mycobacterium tuberculosis: Varying activities at different stages of infection
-
Gorna, A. E., and Bowater., R. P., and Dziadek, J. (2010) DNA repair systems and the pathogenesis of Mycobacterium tuberculosis: varying activities at different stages of infection. Clin. Sci. 119, 187-202
-
(2010)
Clin. Sci.
, vol.119
, pp. 187-202
-
-
Gorna, A.E.1
Bowater, R.P.2
Dziadek, J.3
|