메뉴 건너뛰기




Volumn 78, Issue 8, 2015, Pages

Quantum mechanics of excitation transport in photosynthetic complexes: A key issues review

Author keywords

photosynthesis; quantum physics

Indexed keywords

LIGHT HARVESTING SYSTEM; PHOTOSYNTHESIS;

EID: 84938078912     PISSN: 00344885     EISSN: None     Source Type: Journal    
DOI: 10.1088/0034-4885/78/8/082001     Document Type: Review
Times cited : (60)

References (263)
  • 1
    • 0016150852 scopus 로고
    • Structure of a bacteriochlorophyll-protein from the green photosynthetic bacterium chlorobium limicola: Crystallographic evidence for a trimer
    • Fenna R E, Matthews B W, Olson J M and Shaw E K 1974 Structure of a bacteriochlorophyll-protein from the green photosynthetic bacterium chlorobium limicola: crystallographic evidence for a trimer J. Mol. Biol. 84 231-40
    • (1974) J. Mol. Biol. , vol.84 , pp. 231-240
    • Fenna, R.E.1    Matthews, B.W.2    Olson, J.M.3    Shaw, E.K.4
  • 2
    • 0029861563 scopus 로고    scopus 로고
    • Low-temperature energy transfer in FMO trimers from the green photosynthetic bacterium Chlorobium tepidum
    • Savikhin S and Struve W S 1996 Low-temperature energy transfer in FMO trimers from the green photosynthetic bacterium Chlorobium tepidum Photosynth. Res. 48 271-6
    • (1996) Photosynth. Res. , vol.48 , pp. 271-276
    • Savikhin, S.1    Struve, W.S.2
  • 3
    • 0031267676 scopus 로고    scopus 로고
    • Oscillating anisotropies in a bacteriochlorophyll protein: Evidence for quantum beating between exciton levels
    • Savikhin S, Buck D R and Struve W S 1997 Oscillating anisotropies in a bacteriochlorophyll protein: Evidence for quantum beating between exciton levels Chem. Phys. 223 303-12
    • (1997) Chem. Phys. , vol.223 , pp. 303-312
    • Savikhin, S.1    Buck, D.R.2    Struve, W.S.3
  • 6
    • 35948992643 scopus 로고    scopus 로고
    • Elucidation of population and coherence dynamics using cross-peaks in two-dimensional electronic spectroscopy
    • Cheng Y-C, Engel G S and Fleming G R 2007 Elucidation of population and coherence dynamics using cross-peaks in two-dimensional electronic spectroscopy Chem. Phys. 341 285-95
    • (2007) Chem. Phys. , vol.341 , pp. 285-295
    • Cheng, Y.-C.1    Engel, G.S.2    Fleming, G.R.3
  • 7
    • 84866366510 scopus 로고    scopus 로고
    • Decoherence in the chemical compass: The role of decoherence for avian magnetoreception
    • Tiersch M and Briegel H J 2012 Decoherence in the chemical compass: the role of decoherence for avian magnetoreception Phil. Trans. A 370 4517-40
    • (2012) Phil. Trans. , vol.370 , pp. 4517-4540
    • Tiersch, M.1    Briegel, H.J.2
  • 11
    • 0030444410 scopus 로고    scopus 로고
    • A spectroscopic mechanism for primary olfactory reception
    • Turin L 1996 A spectroscopic mechanism for primary olfactory reception Chem. Sens. 21 038101-91
    • (1996) Chem. Sens. , vol.21 , pp. 038101-038191
    • Turin, L.1
  • 13
    • 84878645273 scopus 로고    scopus 로고
    • Spectroscopic signatures of quantum-coherent energy transfer
    • Collini E 2013 Spectroscopic signatures of quantum-coherent energy transfer Chem. Soc. Rev. 42 4932-47
    • (2013) Chem. Soc. Rev. , vol.42 , pp. 4932-4947
    • Collini, E.1
  • 14
    • 0001266102 scopus 로고
    • A three-dimensional model of the myoglobin molecule obtained by x-ray analysis
    • Kendrew J C, Bodo G, Dintzis H M, Parrish R G and Wyckoff H 1958 A three-dimensional model of the myoglobin molecule obtained by x-ray analysis Nature 181 662-6
    • (1958) Nature , vol.181 , pp. 662-666
    • Kendrew, J.C.1    Bodo, G.2    Dintzis, H.M.3    Parrish, R.G.4    Wyckoff, H.5
  • 15
    • 0024373677 scopus 로고
    • Two-dimensional nmr and protein structure
    • Bax A 1989 Two-dimensional nmr and protein structure Ann. Rev. Biochem. 58 223-56
    • (1989) Ann. Rev. Biochem. , vol.58 , pp. 223-256
    • Bax, A.1
  • 18
    • 63849246525 scopus 로고    scopus 로고
    • Protein structure prediction on the web: A case study using the phyre server
    • Kelley L A and Sternberg M J E 2009 Protein structure prediction on the web: a case study using the phyre server Nat. Protocols 4 363-71
    • (2009) Nat. Protocols , vol.4 , pp. 363-371
    • Kelley, L.A.1    Sternberg, M.J.E.2
  • 19
    • 0018110116 scopus 로고
    • Prediction of the secondary structure of proteins from their amino acid sequence
    • Chou P Y et al 1978 Prediction of the secondary structure of proteins from their amino acid sequence Adv. Enzymol. Relat. Areas Mol. Biol. 47 145-8
    • (1978) Adv. Enzymol. Relat. Areas Mol. Biol. , vol.47 , pp. 145-148
    • Chou, P.Y.1
  • 20
    • 0014158450 scopus 로고
    • Crystal structure studies of amino acids and peptides
    • Marsh R E et al 1967 Crystal structure studies of amino acids and peptides Adv. Protein Chem. 22 235-56
    • (1967) Adv. Protein Chem. , vol.22 , pp. 235-256
    • Marsh, R.E.1
  • 21
    • 0018115846 scopus 로고
    • Conformation of amino acid side-chains in proteins
    • Janin J, Wodak S, Levitt M and Maigret B 1978 Conformation of amino acid side-chains in proteins J. Mol. Biol. 125 357-86
    • (1978) J. Mol. Biol. , vol.125 , pp. 357-386
    • Janin, J.1    Wodak, S.2    Levitt, M.3    Maigret, B.4
  • 23
    • 0032937237 scopus 로고    scopus 로고
    • The name is bond-h bond
    • Martin T W et al 1999 The name is bond-h bond Nat. Struct. Biol. 6 403-5
    • (1999) Nat. Struct. Biol. , vol.6 , pp. 403-405
    • Martin, T.W.1
  • 24
    • 0000180763 scopus 로고
    • Temperature dependence of the hydrophobic interaction in protein folding
    • Baldwin R L 1986 Temperature dependence of the hydrophobic interaction in protein folding Proc. Natl Acad. Sci. 83 8069-72
    • (1986) Proc. Natl Acad. Sci. , vol.83 , pp. 8069-8072
    • Baldwin, R.L.1
  • 25
    • 0019776488 scopus 로고
    • Dipoles of the alpha-helix and beta-sheet: Their role in protein folding
    • Hol W G J, Halie L M and Sander C 1981 Dipoles of the alpha-helix and beta-sheet: Their role in protein folding Nature 294 532-6
    • (1981) Nature , vol.294 , pp. 532-536
    • Hol, W.G.J.1    Halie, L.M.2    Sander, C.3
  • 26
    • 0017387723 scopus 로고
    • Beta-sheet topology and the relatedness of proteins
    • Richardson J S 1977 Beta-sheet topology and the relatedness of proteins Nature 268 495-500
    • (1977) Nature , vol.268 , pp. 495-500
    • Richardson, J.S.1
  • 27
    • 0017881332 scopus 로고
    • The alpha-helix dipole and the properties of proteins
    • Hol W G et al 1978 The alpha-helix dipole and the properties of proteins Nature 273 443
    • (1978) Nature , vol.273 , pp. 443
    • Hol, W.G.1
  • 29
  • 30
    • 33748781457 scopus 로고    scopus 로고
    • The dynamic energy landscape of dihydrofolate reductase catalysis
    • Boehr D D, McElheny D, Jane Dyson H and Wright P E 2006 The dynamic energy landscape of dihydrofolate reductase catalysis Science 313 1638-42
    • (2006) Science , vol.313 , pp. 1638-1642
    • Boehr, D.D.1    McElheny, D.2    Jane Dyson, H.3    Wright, P.E.4
  • 31
    • 39149087014 scopus 로고    scopus 로고
    • Protein folding studied by single-molecule fret
    • Schuler B and Eaton W A 2008 Protein folding studied by single-molecule fret Curr. Opin. Struct. Biol. 18 16-26 Folding and Binding/Protein-nucleic acid interactions
    • (2008) Curr. Opin. Struct. Biol. , vol.18 , pp. 16-26
    • Schuler, B.1    Eaton, W.A.2
  • 32
    • 50149111314 scopus 로고    scopus 로고
    • Shoot-and-trap: Use of specific x-ray damage to study structural protein dynamics by temperature-controlled cryo-crystallography
    • Colletier J-P, Bourgeois D, Sanson B, Fournier D, Sussman J L, Silman I and Weik M 2008 Shoot-and-trap: use of specific x-ray damage to study structural protein dynamics by temperature-controlled cryo-crystallography Proc. Natl. Acad. Sci. 105 11742-7
    • (2008) Proc. Natl. Acad. Sci. , vol.105 , pp. 11742-11747
    • Colletier, J.-P.1    Bourgeois, D.2    Sanson, B.3    Fournier, D.4    Sussman, J.L.5    Silman, I.6    Weik, M.7
  • 33
    • 2942680923 scopus 로고
    • Viscous liquids and the glass transition: A potential energy barrier picture
    • Goldstein M 1969 Viscous liquids and the glass transition: a potential energy barrier picture J. Phys. Chem. Phys. 51 3728-39
    • (1969) J. Phys. Chem. Phys. , vol.51 , pp. 3728-3739
    • Goldstein, M.1
  • 34
    • 0026320866 scopus 로고
    • The energy landscapes and motions of proteins
    • Frauenfelder H, Sligar S G and Wolynes P G 1991 The energy landscapes and motions of proteins Science 254 1598-603
    • (1991) Science , vol.254 , pp. 1598-1603
    • Frauenfelder, H.1    Sligar, S.G.2    Wolynes, P.G.3
  • 35
    • 0023140044 scopus 로고
    • Multiple conformational states of proteins: A molecular dynamics analysis of myoglobin
    • Elber R and Karplus M 1987 Multiple conformational states of proteins: a molecular dynamics analysis of myoglobin Science 235 318-21
    • (1987) Science , vol.235 , pp. 318-321
    • Elber, R.1    Karplus, M.2
  • 38
    • 0031210512 scopus 로고    scopus 로고
    • How nature harvests sunlight
    • Hu X and Schulten K 1997 How nature harvests sunlight Phys. Today 50 28-35
    • (1997) Phys. Today , vol.50 , pp. 28-35
    • Hu, X.1    Schulten, K.2
  • 40
    • 0028147508 scopus 로고
    • Atomic model of plant light-harvesting complex by electron crystallography
    • Kühlbrandt W, Wang D N and Fujiyoshi Y 1994 Atomic model of plant light-harvesting complex by electron crystallography Nature 367 614
    • (1994) Nature , vol.367 , pp. 614
    • Kühlbrandt, W.1    Wang, D.N.2    Fujiyoshi, Y.3
  • 41
    • 0001567643 scopus 로고    scopus 로고
    • Energy transfer between carotenoids and bacteriochlorophylls in light-harvesting complex II of purple bacteria
    • Damjanović A, Ritz T and Schulten K 1999 Energy transfer between carotenoids and bacteriochlorophylls in light-harvesting complex II of purple bacteria Phys. Rev. E 59 3293-311
    • (1999) Phys. Rev. , vol.59 , pp. 3293-3311
    • Damjanović, A.1    Ritz, T.2    Schulten, K.3
  • 43
    • 84856394555 scopus 로고    scopus 로고
    • Quantum chemical description of absorption properties and excited-state processes in photosynthetic systems
    • Koenig C and Neugebauer J 2012 Quantum chemical description of absorption properties and excited-state processes in photosynthetic systems Chem. Phys. Chem 13 386-425
    • (2012) Chem. Phys. Chem , vol.13 , pp. 386-425
    • Koenig, C.1    Neugebauer, J.2
  • 44
    • 33749521844 scopus 로고    scopus 로고
    • How proteins trigger excitation energy transfer in the FMO complex of green sulfur bacteria
    • Adolphs J and Renger T 2006 How proteins trigger excitation energy transfer in the FMO complex of green sulfur bacteria Biophys. J. 91 2778-97
    • (2006) Biophys. J. , vol.91 , pp. 2778-2797
    • Adolphs, J.1    Renger, T.2
  • 47
    • 41649105545 scopus 로고    scopus 로고
    • Quantum dynamics of electronic excitations in biomolecular chromophores: Role of the protein environment and solvent
    • Gilmore J and McKenzie R H 2008 Quantum dynamics of electronic excitations in biomolecular chromophores: role of the protein environment and solvent J. Phys. Chem. A 112 2162-76
    • (2008) J. Phys. Chem. , vol.112 , pp. 2162-2176
    • Gilmore, J.1    McKenzie, R.H.2
  • 49
    • 0000619247 scopus 로고
    • Effect of solvent on the spectrum of chlorophyll
    • Seely G R and Jensen R G 1965 Effect of solvent on the spectrum of chlorophyll Spectrochim. Acta 21 1835-45
    • (1965) Spectrochim. Acta , vol.21 , pp. 1835-1845
    • Seely, G.R.1    Jensen, R.G.2
  • 50
    • 67650447736 scopus 로고    scopus 로고
    • The structural basis for the difference in absorbance spectra for the fmo antenna protein from various green sulfur bacteria
    • Tronrud D E, Wen J, Gay L and Blankenship R E 2009 The structural basis for the difference in absorbance spectra for the fmo antenna protein from various green sulfur bacteria Photosynth. Res. 100 79-87
    • (2009) Photosynth. Res. , vol.100 , pp. 79-87
    • Tronrud, D.E.1    Wen, J.2    Gay, L.3    Blankenship, R.E.4
  • 51
    • 84859757695 scopus 로고    scopus 로고
    • Reinterpretation of the electron density at the site of the eighth bacteriochlorophyll in the fmo protein from pelodictyon phaeum
    • Tronrud D E and Allen J P 2012 Reinterpretation of the electron density at the site of the eighth bacteriochlorophyll in the fmo protein from pelodictyon phaeum Photosynth. Res. 112 71-4
    • (2012) Photosynth. Res. , vol.112 , pp. 71-74
    • Tronrud, D.E.1    Allen, J.P.2
  • 53
    • 65549105448 scopus 로고    scopus 로고
    • Membrane orientation of the FMO antenna protein from Chlorobaculum tepidum as determined by mass spectrometry-based footprinting
    • Wen J, Zhang H, Gross M L and Blankenship R E 2009 Membrane orientation of the FMO antenna protein from Chlorobaculum tepidum as determined by mass spectrometry-based footprinting Proc. Natl. Acad. Sci. USA 106 6134-9
    • (2009) Proc. Natl. Acad. Sci. USA , vol.106 , pp. 6134-6139
    • Wen, J.1    Zhang, H.2    Gross, M.L.3    Blankenship, R.E.4
  • 54
    • 81755171307 scopus 로고    scopus 로고
    • Absence of quantum oscillations and dependence on site energies in electronic excitation transfer in the Fenna-Matthews-Olson trimer
    • Ritschel G, Roden J, Strunz W T, Aspuru-Guzik A and Eisfeld A 2011 Absence of quantum oscillations and dependence on site energies in electronic excitation transfer in the Fenna-Matthews-Olson trimer J. Phys. Chem. Lett. 2 2912-7
    • (2011) J. Phys. Chem. Lett. , vol.2 , pp. 2912-2917
    • Ritschel, G.1    Roden, J.2    Strunz, W.T.3    Aspuru-Guzik, A.4    Eisfeld, A.5
  • 55
    • 84856738687 scopus 로고    scopus 로고
    • Efficient energy transfer in light-harvesting systems, III: The influence of the eighth bacteriochlorophyll on the dynamics and efficiency in FMO
    • Moix J, Wu J, Huo P, Coker D and Cao J 2011 Efficient energy transfer in light-harvesting systems, III: the influence of the eighth bacteriochlorophyll on the dynamics and efficiency in FMO J. Phys. Chem. Lett. 2 3045-52
    • (2011) J. Phys. Chem. Lett. , vol.2 , pp. 3045-3052
    • Moix, J.1    Wu, J.2    Huo, P.3    Coker, D.4    Cao, J.5
  • 56
    • 84877705813 scopus 로고    scopus 로고
    • Influence of site-dependent pigment-protein interactions on excitation energy transfer in photosynthetic light-harvesting
    • Rivera E, Montemayor D, Masia M and Coker D F 2013 Influence of site-dependent pigment-protein interactions on excitation energy transfer in photosynthetic light-harvesting J. Phys. Chem. B 117 5510-21
    • (2013) J. Phys. Chem. , vol.117 , pp. 5510-5521
    • Rivera, E.1    Montemayor, D.2    Masia, M.3    Coker, D.F.4
  • 57
    • 78751672836 scopus 로고    scopus 로고
    • The eighth bacteriochlorophyll completes the excitation energy funnel in the FMO protein
    • Schmidt am Busch M, Muh F, El-Amine Madjet M and Renger T 2011 The eighth bacteriochlorophyll completes the excitation energy funnel in the FMO protein J. Phys. Chem. Lett. 2 93-8
    • (2011) J. Phys. Chem. Lett. , vol.2 , pp. 93-98
    • Schmidt am Busch, M.1    Muh, F.2    El-Amine Madjet, M.3    Renger, T.4
  • 58
    • 84868008896 scopus 로고    scopus 로고
    • An efficient method to calculate excitation energy transfer in light-harvesting systems: Application to the Fenna-Matthews-Olson complex
    • Ritschel G, Roden J, Strunz W T and Eisfeld A 2011 An efficient method to calculate excitation energy transfer in light-harvesting systems: application to the Fenna-Matthews-Olson complex New J. Phys. 13 113034
    • (2011) New J. Phys. , vol.13 , Issue.11
    • Ritschel, G.1    Roden, J.2    Strunz, W.T.3    Eisfeld, A.4
  • 60
    • 0346044811 scopus 로고    scopus 로고
    • Structure and membrane organization of photosystem II in green plants
    • Hankamer B, Barber J and Boekema E J 1997 Structure and membrane organization of photosystem II in green plants Ann. Rev. Plant Biol. 48 641-71
    • (1997) Ann. Rev. Plant Biol. , vol.48 , pp. 641-671
    • Hankamer, B.1    Barber, J.2    Boekema, E.J.3
  • 61
    • 0028075255 scopus 로고
    • Structure and function of the plant light-harvesting complex, lhc-II
    • Kuehlbrandt W 1994 Structure and function of the plant light-harvesting complex, lhc-II Curr. Opin. Struct. Biol. 4 519-28
    • (1994) Curr. Opin. Struct. Biol. , vol.4 , pp. 519-528
    • Kuehlbrandt, W.1
  • 62
    • 84863649804 scopus 로고    scopus 로고
    • Measures and implications of electronic coherence in photosynthetic light-harvesting
    • Smyth C, Fassioli F and Scholes G D 2012 Measures and implications of electronic coherence in photosynthetic light-harvesting Phil. Trans. 370 3728-49
    • (2012) Phil. Trans. , vol.370 , pp. 3728-3749
    • Smyth, C.1    Fassioli, F.2    Scholes, G.D.3
  • 63
    • 0006536757 scopus 로고    scopus 로고
    • Exciton delocalization length in the B850 antenna of rhodobacter sphaeroides
    • Pullerits T, Chachisvilis M and Sundström V 1996 Exciton delocalization length in the B850 antenna of rhodobacter sphaeroides J. Phys. Chem. 100 10787-92
    • (1996) J. Phys. Chem. , vol.100 , pp. 10787-10792
    • Pullerits, T.1    Chachisvilis, M.2    Sundström, V.3
  • 64
    • 0031235773 scopus 로고    scopus 로고
    • Excitons in photosynthetic purple bacteria: Wavelike motion or incoherent hopping?
    • Chachisvilis M, Kühn O, Pullerits T and Sundström V 1997 Excitons in photosynthetic purple bacteria: wavelike motion or incoherent hopping? J. Phys. Chem. B 101 7275-83
    • (1997) J. Phys. Chem. , vol.101 , pp. 7275-7283
    • Chachisvilis, M.1    Kühn, O.2    Pullerits, T.3    Sundström, V.4
  • 65
    • 0035859428 scopus 로고    scopus 로고
    • Exciton delocalization in the B850 light-harvesting complex: Comparison of different measures
    • Dahlbom M, Pullerits T, Mukamel S and Sundström V 2001 Exciton delocalization in the B850 light-harvesting complex: comparison of different measures J. Phys. Chem. B 105 5515-24
    • (2001) J. Phys. Chem. , vol.105 , pp. 5515-5524
    • Dahlbom, M.1    Pullerits, T.2    Mukamel, S.3    Sundström, V.4
  • 66
    • 0001025781 scopus 로고    scopus 로고
    • Exciton (de)localization in the LH2 antenna of Rhodobacter sphaeroides as revealed by relative difference absorption measurements of the LH2 antenna and the B820 subunit
    • Novoderezhkin V, Monshouwer R and van Grondelle R 1999 Exciton (de)localization in the LH2 antenna of Rhodobacter sphaeroides as revealed by relative difference absorption measurements of the LH2 antenna and the B820 subunit J. Phys. Chem. B 103 10540-8
    • (1999) J. Phys. Chem. , vol.103 , pp. 10540-10548
    • Novoderezhkin, V.1    Monshouwer, R.2    Van Grondelle, R.3
  • 67
    • 72449190567 scopus 로고    scopus 로고
    • Light-harvesting complex II B850 excitation dynamics
    • Strümpfer J and Schulten K 2009 light-harvesting complex II B850 excitation dynamics J. Chem. Phys. 131 225101
    • (2009) J. Chem. Phys. , vol.131
    • Strümpfer, J.1    Schulten, K.2
  • 68
    • 84989762024 scopus 로고
    • Structure-function relationships and energy transfer in phycobiliprotein antennae
    • Holzwarth A R 1991 Structure-function relationships and energy transfer in phycobiliprotein antennae Physiol. Plantarum 83 518-28
    • (1991) Physiol. Plantarum , vol.83 , pp. 518-528
    • Holzwarth, A.R.1
  • 70
    • 0033529844 scopus 로고    scopus 로고
    • Evolution of a light-harvesting protein by addition of new subunits and rearrangement of conserved elements: Crystal structure of a cryptophyte phycoerythrin at 1.63 resolution
    • Wilk K E, Harrop S J, Jankova L, Edler D, Keenan G, Sharples F, Hiller R G and Curmi P M G 1999 Evolution of a light-harvesting protein by addition of new subunits and rearrangement of conserved elements: crystal structure of a cryptophyte phycoerythrin at 1.63 resolution Proc. Natl Acad. Sci. 96 8901-6
    • (1999) Proc. Natl Acad. Sci. , vol.96 , pp. 8901-8906
    • Wilk, K.E.1    Harrop, S.J.2    Jankova, L.3    Edler, D.4    Keenan, G.5    Sharples, F.6    Hiller, R.G.7    Curmi, P.M.G.8
  • 71
    • 76249103854 scopus 로고    scopus 로고
    • Coherently wired light-harvesting in photosynthetic marine algae at ambient temperature
    • Collini E, Wong C Y, Wilk K E, Curmi P M G, Brumer P and Scholes G D 2010 Coherently wired light-harvesting in photosynthetic marine algae at ambient temperature Nature 463 644-7
    • (2010) Nature , vol.463 , pp. 644-647
    • Collini, E.1    Wong, C.Y.2    Wilk, K.E.3    Curmi, P.M.G.4    Brumer, P.5    Scholes, G.D.6
  • 72
    • 79952255071 scopus 로고    scopus 로고
    • Delocalization-enhanced long-range energy transfer between cryptophyte algae pe545 antenna proteins
    • Hossein-Nejad H, Curutchet C, Kubica A and Scholes G D 2011 Delocalization-enhanced long-range energy transfer between cryptophyte algae pe545 antenna proteins J. Phys. Chem. B 115 5243-53
    • (2011) J. Phys. Chem. , vol.115 , pp. 5243-5253
    • Hossein-Nejad, H.1    Curutchet, C.2    Kubica, A.3    Scholes, G.D.4
  • 73
    • 84856394555 scopus 로고    scopus 로고
    • Quantum chemical description of absorption properties and excited-state processes in photosynthetic systems
    • König C and Neugebauer J 2012 Quantum chemical description of absorption properties and excited-state processes in photosynthetic systems Chemphyschem 13 386-425
    • (2012) Chemphyschem , vol.13 , pp. 386-425
    • König, C.1    Neugebauer, J.2
  • 74
    • 84981779372 scopus 로고
    • Zwischenmolekulare energiewanderung und fluoreszenz
    • Förster Th 1948 Zwischenmolekulare energiewanderung und fluoreszenz Ann. Phys. 437 55-75
    • (1948) Ann. Phys. , vol.437 , pp. 55-75
    • Th, F.1
  • 75
    • 34548461271 scopus 로고    scopus 로고
    • Resonance energy transfer: Spectral overlap, efficiency, and direction
    • Andrews D L 2007 Resonance energy transfer: spectral overlap, efficiency, and direction J. Chem. Phys. 5 084509
    • (2007) J. Chem. Phys. , vol.5
    • Andrews, D.L.1
  • 76
    • 70350458140 scopus 로고    scopus 로고
    • Theoretical examination of quantum coherence in a photosynthetic system at physiological temperature
    • Ishizaki A and Fleming G R 2009 Theoretical examination of quantum coherence in a photosynthetic system at physiological temperature Proc. Natl. Acad. Sci. USA 106 17255-60
    • (2009) Proc. Natl. Acad. Sci. USA , vol.106 , pp. 17255-17260
    • Ishizaki, A.1    Fleming, G.R.2
  • 78
    • 67650094907 scopus 로고    scopus 로고
    • Beyond Förster resonance energy transfer in biological and nanoscale systems
    • Beljonne D, Curutchet C, Scholes G D and Silbey R J 2009 Beyond Förster resonance energy transfer in biological and nanoscale systems J. Phys. Chem. B 113 6583-99
    • (2009) J. Phys. Chem. , vol.113 , pp. 6583-6599
    • Beljonne, D.1    Curutchet, C.2    Scholes, G.D.3    Silbey, R.J.4
  • 80
    • 0043283159 scopus 로고    scopus 로고
    • Long-range resonance energy transfer in molecular systems
    • Scholes G D 2003 Long-range resonance energy transfer in molecular systems Ann. Rev. Phys. Chem. 54 57-87
    • (2003) Ann. Rev. Phys. Chem. , vol.54 , pp. 57-87
    • Scholes, G.D.1
  • 81
    • 84938085507 scopus 로고    scopus 로고
    • Quantum mechanics for plants
    • Fleming G R and Scholes G D 2004 Quantum mechanics for plants Nature 21 2122-9
    • (2004) Nature , vol.21 , pp. 2122-2129
    • Fleming, G.R.1    Scholes, G.D.2
  • 82
    • 33748863633 scopus 로고    scopus 로고
    • Coherent versus incoherent energy transfer and trapping in photosynthetic antenna complexes
    • Leegwater J A 1996 Coherent versus incoherent energy transfer and trapping in photosynthetic antenna complexes J. Phys. Chem. 100 14403-9
    • (1996) J. Phys. Chem. , vol.100 , pp. 14403-14409
    • Leegwater, J.A.1
  • 83
    • 76149125764 scopus 로고    scopus 로고
    • Theory of excitation energy transfer: From structure to function
    • Renger T 2009 Theory of excitation energy transfer: from structure to function Photosynth. Res. 102 471-85
    • (2009) Photosynth. Res. , vol.102 , pp. 471-485
    • Renger, T.1
  • 84
    • 0035755594 scopus 로고    scopus 로고
    • Bacterial photosynthesis begins with quantum-mechanical coherence
    • Sumi H 2001 Bacterial photosynthesis begins with quantum-mechanical coherence Chem. Rec. 1 480-93
    • (2001) Chem. Rec. , vol.1 , pp. 480-493
    • Sumi, H.1
  • 85
    • 3142547279 scopus 로고    scopus 로고
    • Multichromophoric Förster resonance energy transfer
    • Jang S, Newton M and Silbey R 2004 Multichromophoric Förster resonance energy transfer Phys. Rev. Lett. 92 218301
    • (2004) Phys. Rev. Lett. , vol.92
    • Jang, S.1    Newton, M.2    Silbey, R.3
  • 86
    • 0035281071 scopus 로고    scopus 로고
    • Adapting the Förster theory of energy transfer for modeling dynamics in aggregated molecular assemblies
    • Scholes G D, Jordanides X J and Fleming G R 2001 Adapting the Förster theory of energy transfer for modeling dynamics in aggregated molecular assemblies J. Phys. Chem. B 105 1640-51
    • (2001) J. Phys. Chem. , vol.105 , pp. 1640-1651
    • Scholes, G.D.1    Jordanides, X.J.2    Fleming, G.R.3
  • 87
    • 84908577215 scopus 로고    scopus 로고
    • Generalized master equation with non-markovian multichromophoric Förster resonance energy transfer for modular exciton densities
    • Jang S, Hoyer S, Fleming G and Birgitta Whaley K 2014 Generalized master equation with non-markovian multichromophoric Förster resonance energy transfer for modular exciton densities Phys. Rev. Lett. 113 188102
    • (2014) Phys. Rev. Lett. , vol.113
    • Jang, S.1    Hoyer, S.2    Fleming, G.3    Birgitta Whaley, K.4
  • 88
    • 84897860432 scopus 로고    scopus 로고
    • Perspective: Detecting and measuring exciton delocalization in photosynthetic light-harvesting
    • Scholes G D and Smyth C 2014 Perspective: detecting and measuring exciton delocalization in photosynthetic light-harvesting J. Chem. Phys. 140 110901
    • (2014) J. Chem. Phys. , vol.140
    • Scholes, G.D.1    Smyth, C.2
  • 89
    • 84896478327 scopus 로고    scopus 로고
    • A quantitative theory of coherent delocalization
    • Levi F and Mintert F 2014 A quantitative theory of coherent delocalization New J. Phys. 16 033007
    • (2014) New J. Phys. , vol.16 , Issue.3
    • Levi, F.1    Mintert, F.2
  • 90
    • 0029389629 scopus 로고
    • Evidence for coherent energy transfer in allophycocyanin trimers
    • Edington M D, Riter R E and Beck W F 1995 Evidence for coherent energy transfer in allophycocyanin trimers J. Phys. Chem. 99 15699-704
    • (1995) J. Phys. Chem. , vol.99 , pp. 15699-15704
    • Edington, M.D.1    Riter, R.E.2    Beck, W.F.3
  • 91
    • 0000018906 scopus 로고    scopus 로고
    • The first events in photosynthesis: Electronic coupling and energy transfer dynamics in the photosynthetic reaction centre from rhodobacter sphaeroides
    • Arnett D C, Moser C C, Dutton P L and Scherer N F 1999 The first events in photosynthesis: electronic coupling and energy transfer dynamics in the photosynthetic reaction centre from rhodobacter sphaeroides J. Phys. Chem. B 103 2014-32
    • (1999) J. Phys. Chem. , vol.103 , pp. 2014-2032
    • Arnett, D.C.1    Moser, C.C.2    Dutton, P.L.3    Scherer, N.F.4
  • 93
    • 33745290208 scopus 로고    scopus 로고
    • Two-dimensional optical three-pulse photon echo spectroscopy. II. Signatures of coherent electronic motion and exciton population transfer in dimer two-dimensional spectra
    • Pisliakov A V, Mancal T and Fleming G R 2006 Two-dimensional optical three-pulse photon echo spectroscopy. II. Signatures of coherent electronic motion and exciton population transfer in dimer two-dimensional spectra J. Chem. Phys. 124 234505
    • (2006) J. Chem. Phys. , vol.124
    • Pisliakov, A.V.1    Mancal, T.2    Fleming, G.R.3
  • 94
    • 34250185415 scopus 로고    scopus 로고
    • Coherence dynamics in photosynthesis: Protein protection of excitonic coherence
    • Lee H, Cheng Y-C and Fleming G R 2007 Coherence dynamics in photosynthesis: protein protection of excitonic coherence Science 316 1462-5
    • (2007) Science , vol.316 , pp. 1462-1465
    • Lee, H.1    Cheng, Y.-C.2    Fleming, G.R.3
  • 97
    • 84856400347 scopus 로고    scopus 로고
    • Quantum coherence spectroscopy reveals complex dynamics in bacterial light-harvesting complex 2 (LH2)
    • Harel E and Engel G S 2012 Quantum coherence spectroscopy reveals complex dynamics in bacterial light-harvesting complex 2 (LH2) Proc. Natl. Acad. Sci. USA 109 706-11
    • (2012) Proc. Natl. Acad. Sci. USA , vol.109 , pp. 706-711
    • Harel, E.1    Engel, G.S.2
  • 98
    • 84899002791 scopus 로고    scopus 로고
    • Coherent oscillations in chlorosome elucidated by two-dimensional electronic spectroscopy
    • Jun S, Yang C, Isaji M, Tamiaki H, Kim J and Ihee H 2014 Coherent oscillations in chlorosome elucidated by two-dimensional electronic spectroscopy J. Phys. Chem. Lett. 5 1386-92
    • (2014) J. Phys. Chem. Lett. , vol.5 , pp. 1386-1392
    • Jun, S.1    Yang, C.2    Isaji, M.3    Tamiaki, H.4    Kim, J.5    Ihee, H.6
  • 99
    • 58449086151 scopus 로고    scopus 로고
    • Coherent intrachain energy migration in a conjugated polymer at room temperature
    • Collini E and Scholes G D 2009 Coherent intrachain energy migration in a conjugated polymer at room temperature Science 323 369-73
    • (2009) Science , vol.323 , pp. 369-373
    • Collini, E.1    Scholes, G.D.2
  • 100
    • 84879271819 scopus 로고    scopus 로고
    • Engineering coherence among excited states in synthetic heterodimer systems
    • Hayes D, Griffin G B and Engel G S 2013 Engineering coherence among excited states in synthetic heterodimer systems Science 340 1431-4
    • (2013) Science , vol.340 , pp. 1431-1434
    • Hayes, D.1    Griffin, G.B.2    Engel, G.S.3
  • 102
    • 79956130456 scopus 로고    scopus 로고
    • On the interpretation of quantum coherent beats observed in two-dimensional electronic spectra of photosynthetic light-harvesting complexes
    • Ishizaki A and Fleming G R 2011 On the interpretation of quantum coherent beats observed in two-dimensional electronic spectra of photosynthetic light-harvesting complexes J. Phys. Chem. B 115 6227-33
    • (2011) J. Phys. Chem. , vol.115 , pp. 6227-6233
    • Ishizaki, A.1    Fleming, G.R.2
  • 103
    • 84855841542 scopus 로고    scopus 로고
    • Two-dimensional spectroscopy can distinguish between decoherence and dephasing of zero-quantum coherences
    • Fidler A F, Harel E, Long P D and Engel G S 2012 Two-dimensional spectroscopy can distinguish between decoherence and dephasing of zero-quantum coherences J. Phys. Chem. A 116 282-9
    • (2012) J. Phys. Chem. , vol.116 , pp. 282-289
    • Fidler, A.F.1    Harel, E.2    Long, P.D.3    Engel, G.S.4
  • 104
    • 79961243933 scopus 로고    scopus 로고
    • Comparison of electronic and vibrational coherence measured by two-dimensional electronic spectroscopy
    • Turner D B, Wilk K E, Curmi P M G and Scholes G D 2011 Comparison of electronic and vibrational coherence measured by two-dimensional electronic spectroscopy J. Phys. Chem. Lett. 2 1904-11
    • (2011) J. Phys. Chem. Lett. , vol.2 , pp. 1904-1911
    • Turner, D.B.1    Wilk, K.E.2    Curmi, P.M.G.3    Scholes, G.D.4
  • 105
    • 84882372751 scopus 로고    scopus 로고
    • Disentangling electronic and vibronic coherences in two-dimensional echo spectra
    • Kreisbeck C, Kramer T and Aspuru-Guzik A 2013 Disentangling electronic and vibronic coherences in two-dimensional echo spectra J. Phys. Chem. B 117 9380-5
    • (2013) J. Phys. Chem. , vol.117 , pp. 9380-9385
    • Kreisbeck, C.1    Kramer, T.2    Aspuru-Guzik, A.3
  • 106
    • 84886719220 scopus 로고    scopus 로고
    • Distinctive character of electronic and vibrational coherences in disordered molecular aggregates
    • Butkus V, Zigmantas D, Abramavicius D and Valkunas L 2013 Distinctive character of electronic and vibrational coherences in disordered molecular aggregates Chem. Phys. Lett. 587 93-8
    • (2013) Chem. Phys. Lett. , vol.587 , pp. 93-98
    • Butkus, V.1    Zigmantas, D.2    Abramavicius, D.3    Valkunas, L.4
  • 107
    • 84893821835 scopus 로고    scopus 로고
    • Distinguishing electronic and vibronic coherence in 2D spectra by Their temperature dependence
    • Perlík V, Lincoln C, Sanda F and Hauer J 2014 Distinguishing electronic and vibronic coherence in 2D spectra by Their temperature dependence J. Phys. Chem. Lett. 5 404-7
    • (2014) J. Phys. Chem. Lett. , vol.5 , pp. 404-407
    • Perlík, V.1    Lincoln, C.2    Sanda, F.3    Hauer, J.4
  • 108
    • 84865559563 scopus 로고    scopus 로고
    • Vibrational versus electronic coherences in 2D spectrum of molecular systems
    • Butkus V, Zigmantas D, Valkunas L and Abramavicius D 2012 Vibrational versus electronic coherences in 2D spectrum of molecular systems Chem. Phys. Lett. 545 40-3
    • (2012) Chem. Phys. Lett. , vol.545 , pp. 40-43
    • Butkus, V.1    Zigmantas, D.2    Valkunas, L.3    Abramavicius, D.4
  • 110
    • 78751671529 scopus 로고    scopus 로고
    • Electronic coherences and vibrational wave-packets in single molecules studied with femtosecond phase-controlled spectroscopy
    • Hildner R, Brinks D, Stefani F D and van Hulst N F 2011 Electronic coherences and vibrational wave-packets in single molecules studied with femtosecond phase-controlled spectroscopy Phys. Chem. Chem. Phys. 13 1888-94
    • (2011) Phys. Chem. Chem. Phys. , vol.13 , pp. 1888-1894
    • Hildner, R.1    Brinks, D.2    Stefani, F.D.3    Van Hulst, N.F.4
  • 111
    • 79551625846 scopus 로고    scopus 로고
    • Femtosecond coherence and quantum control of single molecules at room temperature
    • Hildner R, Brinks D and van Hulst N F 2010 Femtosecond coherence and quantum control of single molecules at room temperature Nat. Phys. 7 172-7
    • (2010) Nat. Phys. , vol.7 , pp. 172-177
    • Hildner, R.1    Brinks, D.2    Van Hulst, N.F.3
  • 112
    • 84879274869 scopus 로고    scopus 로고
    • Quantum coherent energy transfer over varying pathways in single light-harvesting complexes
    • Hildner R, Brinks D, Nieder J B, Cogdell R J and van Hulst N F 2013 Quantum coherent energy transfer over varying pathways in single light-harvesting complexes Science 340 1448-51
    • (2013) Science , vol.340 , pp. 1448-1451
    • Hildner, R.1    Brinks, D.2    Nieder, J.B.3    Cogdell, R.J.4    Van Hulst, N.F.5
  • 113
    • 84863653815 scopus 로고    scopus 로고
    • Microscopic quantum coherence in a photosynthetic-light-harvesting antenna
    • Dawlaty J M, Ishizaki A, De A K and Fleming G R 2012 Microscopic quantum coherence in a photosynthetic-light-harvesting antenna Phil. Trans. 370 3672-91
    • (2012) Phil. Trans. , vol.370 , pp. 3672-3691
    • Dawlaty, J.M.1    Ishizaki, A.2    De, A.K.3    Fleming, G.R.4
  • 115
    • 84903197999 scopus 로고    scopus 로고
    • Strong antenna-enhanced fluorescence of a single light-harvesting complex shows photon antibunching
    • Wientjes E, Renger J, Curto A G, Cogdell R and van Hulst N F 2014 Strong antenna-enhanced fluorescence of a single light-harvesting complex shows photon antibunching Nat. Commun. 5 4236
    • (2014) Nat. Commun. , vol.5 , pp. 4236
    • Wientjes, E.1    Renger, J.2    Curto, A.G.3    Cogdell, R.4    Van Hulst, N.F.5
  • 117
    • 84857851413 scopus 로고    scopus 로고
    • Witness for initial system-environment correlations in open-system dynamics
    • Laine E-M, Piilo J and Breuer H-P 2010 Witness for initial system-environment correlations in open-system dynamics Europhys. Lett. 92 60010
    • (2010) Europhys. Lett. , vol.92 , Issue.6 , pp. 60010
    • Laine, E.-M.1    Piilo, J.2    Breuer, H.-P.3
  • 118
    • 63249101129 scopus 로고    scopus 로고
    • Vanishing quantum discord is necessary and sufficient for completely positive maps
    • Shabani A and Lidar D A 2009 Vanishing quantum discord is necessary and sufficient for completely positive maps Phys. Rev. Lett. 102 100402
    • (2009) Phys. Rev. Lett. , vol.102
    • Shabani, A.1    Lidar, D.A.2
  • 119
    • 68549109656 scopus 로고    scopus 로고
    • Maps for general open quantum systems and a theory of linear quantum error correction
    • Shabani A and Lidar D 2009 Maps for general open quantum systems and a theory of linear quantum error correction Phys. Rev. A 80 012309
    • (2009) Phys. Rev. , vol.80
    • Shabani, A.1    Lidar, D.2
  • 120
    • 80155201159 scopus 로고    scopus 로고
    • Detecting nonclassical system-environment correlations by local operations
    • Gessner M and Breuer H-P 2011 Detecting nonclassical system-environment correlations by local operations Phys. Rev. Lett. 107 180402
    • (2011) Phys. Rev. Lett. , vol.107
    • Gessner, M.1    Breuer, H.-P.2
  • 121
    • 0037076824 scopus 로고    scopus 로고
    • Complete positivity and entangled degrees of freedom
    • Benatti F, Floreanini R and Romano R 2002 Complete positivity and entangled degrees of freedom J. Phys. A: Math. Gen. 35 4955-72
    • (2002) J. Phys. A: Math. Gen. , vol.35 , Issue.23 , pp. 4955-4972
    • Benatti, F.1    Floreanini, R.2    Romano, R.3
  • 122
    • 84939970845 scopus 로고    scopus 로고
    • Violations of the second law of thermodynamics by a non-completely positive dynamics
    • Argentieri G, Benatti F, Floreanini R and Pezzutto M 2014 Violations of the second law of thermodynamics by a non-completely positive dynamics Europhys. Lett. 107 50007
    • (2014) Europhys. Lett. , vol.107 , Issue.5 , pp. 50007
    • Argentieri, G.1    Benatti, F.2    Floreanini, R.3    Pezzutto, M.4
  • 123
    • 0347139281 scopus 로고    scopus 로고
    • The time-convolutionless projection operator technique in the quantum theory of dissipation and decoherence
    • Breuer H-P, Kappler B and Petruccione F 2001 The time-convolutionless projection operator technique in the quantum theory of dissipation and decoherence Ann. Phys. 291 36-70
    • (2001) Ann. Phys. , vol.291 , pp. 36-70
    • Breuer, H.-P.1    Kappler, B.2    Petruccione, F.3
  • 124
    • 0000137958 scopus 로고    scopus 로고
    • Stochastic wave-function method for non-Markovian quantum master equations
    • Breuer H-P, Kappler B and Petruccione F 1999 Stochastic wave-function method for non-Markovian quantum master equations Phys. Rev. A 59 1633-43
    • (1999) Phys. Rev. , vol.59 , pp. 1633-1643
    • Breuer, H.-P.1    Kappler, B.2    Petruccione, F.3
  • 125
    • 0642291604 scopus 로고
    • A cumulant expansion for stochastic linear differential equations. i
    • Van Kampen N G 1974 A cumulant expansion for stochastic linear differential equations. I Physica 74 215-38
    • (1974) Physica , vol.74 , pp. 215-238
    • Van Kampen, N.G.1
  • 126
    • 0642291604 scopus 로고
    • A cumulant expansion for stochastic linear differential equations. II
    • Van Kampen N G 1974 A cumulant expansion for stochastic linear differential equations. II Physica 74 239-47
    • (1974) Physica , vol.74 , pp. 239-247
    • Van Kampen, N.G.1
  • 127
    • 0037787230 scopus 로고
    • Ensemble method in the theory of irreversibility
    • Zwanzig R 1960 Ensemble method in the theory of irreversibility J. Phys. Chem. Phys. 33 1338
    • (1960) J. Phys. Chem. Phys. , vol.33 , pp. 1338
    • Zwanzig, R.1
  • 128
    • 0000160292 scopus 로고
    • On quantum theory of transport phenomena
    • Nakajima S 1958 On quantum theory of transport phenomena Prog. Theor. Phys. 20 948-59
    • (1958) Prog. Theor. Phys. , vol.20 , pp. 948-959
    • Nakajima, S.1
  • 129
    • 34250301394 scopus 로고
    • A generalized stochastic liouville equation. Non-Markovian versus memoryless master equations
    • Shibata F, Takahashi Y and Hashitsume N 1977 A generalized stochastic liouville equation. Non-Markovian versus memoryless master equations J. Stat. Phys. 17 171-87
    • (1977) J. Stat. Phys. , vol.17 , pp. 171-187
    • Shibata, F.1    Takahashi, Y.2    Hashitsume, N.3
  • 130
    • 0009547468 scopus 로고
    • Time-convolutionless projection operator formalism for elimination of fast variables. Applications to Brownian motion
    • Chaturvedi S and Shibata F 1979 Time-convolutionless projection operator formalism for elimination of fast variables. Applications to Brownian motion Z. Phys. 35 297-308
    • (1979) Z. Phys. , vol.35 , pp. 297-308
    • Chaturvedi, S.1    Shibata, F.2
  • 131
    • 77956286829 scopus 로고    scopus 로고
    • Nakajima-Zwanzig versus time-convolutionless master equation for the non-Markovian dynamics of a two-level system
    • Smirne A and Vacchini B 2010 Nakajima-Zwanzig versus time-convolutionless master equation for the non-Markovian dynamics of a two-level system Phys. Rev. A 82 022110
    • (2010) Phys. Rev. , vol.82
    • Smirne, A.1    Vacchini, B.2
  • 132
    • 67649090416 scopus 로고    scopus 로고
    • On the adequacy of the Redfield equation and related approaches to the study of quantum dynamics in electronic energy transfer
    • Ishizaki A and Fleming G R 2009 On the adequacy of the Redfield equation and related approaches to the study of quantum dynamics in electronic energy transfer J. Chem. Phys. 130 234110
    • (2009) J. Chem. Phys. , vol.130
    • Ishizaki, A.1    Fleming, G.R.2
  • 133
    • 28144434370 scopus 로고    scopus 로고
    • Markovian approximation in the relaxation of open quantum systems
    • Cheng Y C and Silbey R J 2005 Markovian approximation in the relaxation of open quantum systems J. Phys. Chem. B 109 21399-405
    • (2005) J. Phys. Chem. , vol.109 , pp. 21399-21405
    • Cheng, Y.C.1    Silbey, R.J.2
  • 134
    • 3543009193 scopus 로고
    • On the generators of quantum dynamical semigroups
    • Lindblad G 1976 On the generators of quantum dynamical semigroups Commun. Math. Phys. 48 119-30
    • (1976) Commun. Math. Phys. , vol.48 , pp. 119-130
    • Lindblad, G.1
  • 135
    • 36749106315 scopus 로고
    • Completely positive dynamical semigroups of N-level systems
    • Gorini V, Kossakowski A and Sudarshan E C G 1976 Completely positive dynamical semigroups of N-level systems J. Math. Phys. 17 821
    • (1976) J. Math. Phys. , vol.17 , pp. 821
    • Gorini, V.1    Kossakowski, A.2    Sudarshan, E.C.G.3
  • 136
    • 67650881946 scopus 로고    scopus 로고
    • Quantum linear Boltzmann equation
    • Vacchini B and Hornberger K 2009 Quantum linear Boltzmann equation Phys. Rep. 478 71-120
    • (2009) Phys. Rep. , vol.478 , pp. 71-120
    • Vacchini, B.1    Hornberger, K.2
  • 137
    • 34250428925 scopus 로고
    • An exactly solvable model for coherent and incoherent exciton motion
    • Haken H and Strobl G 1973 An exactly solvable model for coherent and incoherent exciton motion Z. Phys. 262 135-48
    • (1973) Z. Phys. , vol.262 , pp. 135-148
    • Haken, H.1    Strobl, G.2
  • 138
    • 84863688903 scopus 로고    scopus 로고
    • Theoretical description of quantum effects in multi-chromophoric aggregates
    • Zimanyi E N and Silbey R J 2012 Theoretical description of quantum effects in multi-chromophoric aggregates Phil. Trans. 370 3620-37
    • (2012) Phil. Trans. , vol.370 , pp. 3620-3637
    • Zimanyi, E.N.1    Silbey, R.J.2
  • 140
    • 84863648389 scopus 로고    scopus 로고
    • Computational methodologies and physical insights into electronic energy transfer in photosynthetic light-harvesting complexes
    • Pachón L A and Brumer P 2012 Computational methodologies and physical insights into electronic energy transfer in photosynthetic light-harvesting complexes Phys. Chem. Chem. Phys. 14 10094-108
    • (2012) Phys. Chem. Chem. Phys. , vol.14 , pp. 10094-10108
    • Pachón, L.A.1    Brumer, P.2
  • 141
    • 77954358941 scopus 로고    scopus 로고
    • Quantum coherence and its interplay with protein environments in photosynthetic electronic energy transfer
    • Ishizaki A, Calhoun T R, Schlau-Cohen G S and Fleming G R 2010 Quantum coherence and its interplay with protein environments in photosynthetic electronic energy transfer Phys. Chem. Chem. Phys. 12 7319-37
    • (2010) Phys. Chem. Chem. Phys. , vol.12 , pp. 7319-7337
    • Ishizaki, A.1    Calhoun, T.R.2    Schlau-Cohen, G.S.3    Fleming, G.R.4
  • 143
    • 84973654655 scopus 로고
    • Zur quantentheorie der molekeln
    • Born M and Oppenheimer R 1927 Zur quantentheorie der molekeln Ann. Phys. 389 457-84
    • (1927) Ann. Phys. , vol.389 , pp. 457-484
    • Born, M.1    Oppenheimer, R.2
  • 146
    • 0342520879 scopus 로고    scopus 로고
    • Electron-vibrational coupling in the Fenna-Matthews-Olson complex of prosthecochloris a estuarii determined by temperature-dependent absorption and fluorescence line-narrowing measurements
    • Wendling M, Pullerits T, Przyjalgowski M A, Vulto S I E, Aartsma T J, van Grondelle R and van Amerongen H 2000 Electron-vibrational coupling in the Fenna-Matthews-Olson complex of prosthecochloris a estuarii determined by temperature-dependent absorption and fluorescence line-narrowing measurements J. Phys. Chem. B 104 5825-31
    • (2000) J. Phys. Chem. , vol.104 , pp. 5825-5831
    • Wendling, M.1    Pullerits, T.2    Przyjalgowski, M.A.3    Vulto, S.I.E.4    Aartsma, T.J.5    Van Grondelle, R.6    Van Amerongen, H.7
  • 147
    • 84860157485 scopus 로고    scopus 로고
    • The nature of the low energy band of the Fenna-Matthews-Olson complex: Vibronic signatures
    • Caycedo-Soler F, Chin A W, Almeida J, Huelga S F and Plenio M B 2012 The nature of the low energy band of the Fenna-Matthews-Olson complex: vibronic signatures J. Chem. Phys. 136 155102
    • (2012) J. Chem. Phys. , vol.136
    • Caycedo-Soler, F.1    Chin, A.W.2    Almeida, J.3    Huelga, S.F.4    Plenio, M.B.5
  • 148
    • 0000451371 scopus 로고    scopus 로고
    • Ultrafast excitation energy transfer dynamics in photosynthetic pigment-protein complexes
    • Renger T, May V and Kühn O 2001 Ultrafast excitation energy transfer dynamics in photosynthetic pigment-protein complexes Phys. Rep. 343 137-254
    • (2001) Phys. Rep. , vol.343 , pp. 137-254
    • Renger, T.1    May, V.2    Kühn, O.3
  • 149
    • 18044364426 scopus 로고    scopus 로고
    • Short-time dynamics through conical intersections in macrosystems
    • Cederbaum L, Gindensperger E and Burghardt I 2005 Short-time dynamics through conical intersections in macrosystems Phys. Rev. Lett. 94 113003
    • (2005) Phys. Rev. Lett. , vol.94
    • Cederbaum, L.1    Gindensperger, E.2    Burghardt, I.3
  • 150
    • 67651176203 scopus 로고    scopus 로고
    • Energy and charge-transfer dynamics using projected modes
    • Pereverzev A, Bittner E R and Burghardt I 2009 Energy and charge-transfer dynamics using projected modes J. Chem. Phys. 131 034104
    • (2009) J. Chem. Phys. , vol.131
    • Pereverzev, A.1    Bittner, E.R.2    Burghardt, I.3
  • 151
    • 0000959793 scopus 로고    scopus 로고
    • Dissipative exciton motion in a chlorophyll a / b dimer of the light-harvesting complex of photosystem II: Simulation of pump-probe spectra
    • Renger T, Voigt J, May V, Haus V, Berlin D, Ku O and Kühn O 1996 Dissipative exciton motion in a chlorophyll a / b dimer of the light-harvesting complex of photosystem II: simulation of pump-probe spectra J. Phys. Chem. 100 15654-62
    • (1996) J. Phys. Chem. , vol.100 , pp. 15654-15662
    • Renger, T.1    Voigt, J.2    May, V.3    Haus, V.4    Berlin, D.5    Ku, O.6    Kühn, O.7
  • 153
    • 0001698251 scopus 로고
    • Directed mutations affecting spectroscopic and electron transfer properties of the primary donor in the photosynthetic reaction centre
    • Bylina E J and Youvan D C 1988 Directed mutations affecting spectroscopic and electron transfer properties of the primary donor in the photosynthetic reaction centre Proc. Natl. Acad. Sci. USA 85 7226-30
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 7226-7230
    • Bylina, E.J.1    Youvan, D.C.2
  • 154
    • 47749129201 scopus 로고    scopus 로고
    • Visualization of excitonic structure in the Fenna-Matthews-Olson photosynthetic complex by polarization-dependent two-dimensional electronic spectroscopy
    • Read E L, Schlau-Cohen G S, Engel G S, Wen J, Blankenship R E and Fleming G R 2008 Visualization of excitonic structure in the Fenna-Matthews-Olson photosynthetic complex by polarization-dependent two-dimensional electronic spectroscopy Biophys. J. 95 847-56
    • (2008) Biophys. J. , vol.95 , pp. 847-856
    • Read, E.L.1    Schlau-Cohen, G.S.2    Engel, G.S.3    Wen, J.4    Blankenship, R.E.5    Fleming, G.R.6
  • 156
    • 33846673348 scopus 로고
    • Observation of the one-exciton to two-exciton transition in a J aggregate
    • Fidder H, Knoester J and Wiersma D A 1993 Observation of the one-exciton to two-exciton transition in a J aggregate J. Phys. Chem. Phys. 98 6564
    • (1993) J. Phys. Chem. Phys. , vol.98 , pp. 6564
    • Fidder, H.1    Knoester, J.2    Wiersma, D.A.3
  • 157
    • 37749030050 scopus 로고    scopus 로고
    • Calculation of pigment transition energies in the FMO protein: From simplicity to complexity and back
    • Adolphs J, Müh F, El-Amine Madjet M and Renger T 2008 Calculation of pigment transition energies in the FMO protein: from simplicity to complexity and back Photosynth. Res. 95 197-209
    • (2008) Photosynth. Res. , vol.95 , pp. 197-209
    • Adolphs, J.1    Müh, F.2    El-Amine Madjet, M.3    Renger, T.4
  • 159
    • 33748768973 scopus 로고    scopus 로고
    • Intermolecular coulomb couplings from ab initio electrostatic potentials: Application to optical transitions of strongly coupled pigments in photosynthetic antennae and reaction centres
    • Madjet M E, Abdurahman A and Renger T 2006 Intermolecular coulomb couplings from ab initio electrostatic potentials: application to optical transitions of strongly coupled pigments in photosynthetic antennae and reaction centres J. Phys. Chem. B 110 17268-81
    • (2006) J. Phys. Chem. , vol.110 , pp. 17268-17281
    • Madjet, M.E.1    Abdurahman, A.2    Renger, T.3
  • 160
    • 0031358096 scopus 로고    scopus 로고
    • Toward an integral interpretation of the optical steady-state spectra of the FMO-complex of prosthecochloris aestuarii. 2. Exciton simulations
    • Louwe R J W, Vrieze J, Hoff A J and Aartsma T J 1997 Toward an integral interpretation of the optical steady-state spectra of the FMO-complex of prosthecochloris aestuarii. 2. Exciton simulations J. Phys. Chem. B 101 11280-7
    • (1997) J. Phys. Chem. , vol.101 , pp. 11280-11287
    • Louwe, R.J.W.1    Vrieze, J.2    Hoff, A.J.3    Aartsma, T.J.4
  • 161
    • 0000124953 scopus 로고
    • Theory of the optical spectra of the bacteriochlorophyll a antenna protein trimer from prosthecochloris aestuarii
    • Pearlstein R M 1992 Theory of the optical spectra of the bacteriochlorophyll a antenna protein trimer from prosthecochloris aestuarii Photosynth. Res. 31 213-26
    • (1992) Photosynth. Res. , vol.31 , pp. 213-226
    • Pearlstein, R.M.1
  • 162
    • 84989696224 scopus 로고
    • Simulations of prosthecochloris bacteriochlorophyll a-protein optical spectra improved by parametric computer search
    • Lu X and Pearlstein R M 1993 Simulations of prosthecochloris bacteriochlorophyll a-protein optical spectra improved by parametric computer search Photochem. Photobiol. 57 86-91
    • (1993) Photochem. Photobiol. , vol.57 , pp. 86-91
    • Lu, X.1    Pearlstein, R.M.2
  • 163
    • 33748405573 scopus 로고    scopus 로고
    • Interpretation of the excited-state structure of the Fenna-Matthews-Olson pigment protein complex of prosthecochloris aestuarii based on the simultaneous simulation of the 4 thinsp;k absorption, linear dichroism, and singlet-triplet absorption difference spectra: A possible excitonic explanation?
    • Glen D 1996 Interpretation of the excited-state structure of the Fenna-Matthews-Olson pigment protein complex of prosthecochloris aestuarii based on the simultaneous simulation of the 4 thinsp;k absorption, linear dichroism, and singlet-triplet absorption difference spectra: a possible excitonic explanation? J. Phys. Chem. 100 17683-9
    • (1996) J. Phys. Chem. , vol.100 , pp. 17683-17689
    • Glen, D.1
  • 164
    • 11744331123 scopus 로고    scopus 로고
    • Ultrafast exciton motion in photosynthetic antenna systems: The fmo-complex
    • Renger Th and May V 1998 Ultrafast exciton motion in photosynthetic antenna systems: the fmo-complex J. Phys. Chem. A 102 4381-91
    • (1998) J. Phys. Chem. , vol.102 , pp. 4381-4391
    • Th, R.1    May, V.2
  • 165
    • 0036228191 scopus 로고    scopus 로고
    • The quantitative relationship between structure and polarized spectroscopy in the fmo complex of prosthecochloris aestuarii: Refining experiments and simulations
    • Wendling M, Przyjalgowski M A, Glen D, Vulto S I E, Aartsma T J, van Grondelle R and van Amerongen H 2002 The quantitative relationship between structure and polarized spectroscopy in the fmo complex of prosthecochloris aestuarii: refining experiments and simulations Photosynth. Res. 71 99-123
    • (2002) Photosynth. Res. , vol.71 , pp. 99-123
    • Wendling, M.1    Przyjalgowski, M.A.2    Glen, D.3    Vulto, S.I.E.4    Aartsma, T.J.5    Van Grondelle, R.6    Van Amerongen, H.7
  • 167
    • 0000081668 scopus 로고
    • Collective variable description of native protein dynamics
    • Hayward S and Go N 1995 Collective variable description of native protein dynamics Ann. Rev. Phys. Chem. 46 223-50
    • (1995) Ann. Rev. Phys. Chem. , vol.46 , pp. 223-250
    • Hayward, S.1    Go, N.2
  • 168
    • 79952525530 scopus 로고    scopus 로고
    • The effect of correlated bath fluctuations on exciton transfer
    • Strümpfer J and Schulten K 2011 The effect of correlated bath fluctuations on exciton transfer J. Chem. Phys. 134 095102
    • (2011) J. Chem. Phys. , vol.134
    • Strümpfer, J.1    Schulten, K.2
  • 169
    • 79952099133 scopus 로고    scopus 로고
    • Quest for spatially correlated fluctuations in the FMO light-harvesting complex
    • Olbrich C, Strümpfer J, Schulten K and Kleinekathöfer U 2011 Quest for spatially correlated fluctuations in the FMO light-harvesting complex J. Phys. Chem. B 115 758-64
    • (2011) J. Phys. Chem. , vol.115 , pp. 758-764
    • Olbrich, C.1    Strümpfer, J.2    Schulten, K.3    Kleinekathöfer, U.4
  • 170
    • 77955079075 scopus 로고    scopus 로고
    • Quantum coherent biomolecular energy transfer with spatially correlated fluctuations
    • Nalbach P, Eckel J and Thorwart M 2010 Quantum coherent biomolecular energy transfer with spatially correlated fluctuations New J. Phys. 12 065043
    • (2010) New J. Phys. , vol.12 , Issue.6
    • Nalbach, P.1    Eckel, J.2    Thorwart, M.3
  • 171
    • 0037042612 scopus 로고    scopus 로고
    • On the relation of protein dynamics and exciton relaxation in pigment-protein complexes: An estimation of the spectral density and a theory for the calculation of optical spectra
    • Renger T and Marcus R A 2002 On the relation of protein dynamics and exciton relaxation in pigment-protein complexes: an estimation of the spectral density and a theory for the calculation of optical spectra J. Phys. Chem. Phys. 116 9997
    • (2002) J. Phys. Chem. Phys. , vol.116 , pp. 9997
    • Renger, T.1    Marcus, R.A.2
  • 172
    • 79960714414 scopus 로고    scopus 로고
    • Theory and simulation of the environmental effects on FMO electronic transitions
    • Olbrich C, Strümpfer J, Schulten K and Kleinekathöfer U 2011 Theory and simulation of the environmental effects on FMO electronic transitions J. Phys. Chem. Lett. 2011 1771-6
    • (2011) J. Phys. Chem. Lett. , vol.2011 , pp. 1771-1776
    • Olbrich, C.1    Strümpfer, J.2    Schulten, K.3    Kleinekathöfer, U.4
  • 173
    • 84865025316 scopus 로고    scopus 로고
    • Quantum coherence in photosynthetic exciton dynamics
    • Nalbach P and Thorwart M 2012 Quantum coherence in photosynthetic exciton dynamics J. Phys.: Conf. Ser. 376 012025
    • (2012) J. Phys.: Conf. Ser. , vol.376 , Issue.1
    • Nalbach, P.1    Thorwart, M.2
  • 174
    • 49649090819 scopus 로고    scopus 로고
    • Efficiency of energy transfer in a light-harvesting system under quantum coherence
    • Olaya-Castro A, Lee C, Olsen F and Johnson N 2008 Efficiency of energy transfer in a light-harvesting system under quantum coherence Phys. Rev. B 78 085115
    • (2008) Phys. Rev. , vol.78
    • Olaya-Castro, A.1    Lee, C.2    Olsen, F.3    Johnson, N.4
  • 175
    • 77954698835 scopus 로고    scopus 로고
    • Quantum state tuning of energy transfer in a correlated environment
    • Fassioli F, Nazir A and Olaya-Castro A 2010 Quantum state tuning of energy transfer in a correlated environment J. Phys. Chem. Lett. 1 2139-43
    • (2010) J. Phys. Chem. Lett. , vol.1 , pp. 2139-2143
    • Fassioli, F.1    Nazir, A.2    Olaya-Castro, A.3
  • 176
    • 84870307902 scopus 로고    scopus 로고
    • Molecular response in one-photon absorption via natural thermal light versus pulsed laser excitation
    • Brumer P and Shapiro M 2012 Molecular response in one-photon absorption via natural thermal light versus pulsed laser excitation Proc. Natl Acad. Sci. USA 109 19575-8
    • (2012) Proc. Natl Acad. Sci. USA , vol.109 , pp. 19575-19578
    • Brumer, P.1    Shapiro, M.2
  • 178
    • 84885026328 scopus 로고    scopus 로고
    • Stationary quantum coherence and transport in disordered networks
    • Witt B and Mintert F 2013 Stationary quantum coherence and transport in disordered networks New J. Phys. 15 093020
    • (2013) New J. Phys. , vol.15 , Issue.9
    • Witt, B.1    Mintert, F.2
  • 179
    • 70449635318 scopus 로고    scopus 로고
    • Measure for the degree of non-markovian behaviour of quantum processes in open systems
    • Breuer H-P, Laine E-M and Piilo J 2009 Measure for the degree of non-markovian behaviour of quantum processes in open systems Phys. Rev. Lett. 103 210401
    • (2009) Phys. Rev. Lett. , vol.103
    • Breuer, H.-P.1    Laine, E.-M.2    Piilo, J.3
  • 180
    • 77249093601 scopus 로고    scopus 로고
    • Non-markovian quantum dynamics: Local versus nonlocal
    • Chrus̈ciski D and Kossakowski A 2010 Non-markovian quantum dynamics: local versus nonlocal Phys. Rev. Lett. 104 070406
    • (2010) Phys. Rev. Lett. , vol.104
    • Chrus̈ciski, D.1    Kossakowski, A.2
  • 181
    • 77955114720 scopus 로고    scopus 로고
    • Entanglement and non-markovianity of quantum evolutions
    • Rivas Á, Huelga S and Plenio M 2010 Entanglement and non-markovianity of quantum evolutions Phys. Rev. Lett. 105 050403
    • (2010) Phys. Rev. Lett. , vol.105
    • Rivas Á.1    Huelga, S.2    Plenio, M.3
  • 182
    • 0032495969 scopus 로고    scopus 로고
    • Exciton-migration and three-pulse femtosecond optical spectroscopies of photosynthetic antenna complexes
    • Zhang W M, Meier T, Chernyak V and Mukamel S 1998 Exciton-migration and three-pulse femtosecond optical spectroscopies of photosynthetic antenna complexes J. Phys. Chem. Phys. 108 7763
    • (1998) J. Phys. Chem. Phys. , vol.108 , pp. 7763
    • Zhang, W.M.1    Meier, T.2    Chernyak, V.3    Mukamel, S.4
  • 183
    • 0036142054 scopus 로고    scopus 로고
    • Influence of phonons on exciton transfer dynamics: Comparison of the Redfield, Förster, and modified Redfield equations
    • Yang M and Fleming G R 2002 Influence of phonons on exciton transfer dynamics: comparison of the Redfield, Förster, and modified Redfield equations Chem. Phys. 275 355-72
    • (2002) Chem. Phys. , vol.275 , pp. 355-372
    • Yang, M.1    Fleming, G.R.2
  • 184
    • 77952980235 scopus 로고    scopus 로고
    • Multiphonon transitions in the biomolecular energy transfer dynamics
    • Nalbach P and Thorwart M 2010 Multiphonon transitions in the biomolecular energy transfer dynamics J. Chem. Phys. 132 194111
    • (2010) J. Chem. Phys. , vol.132
    • Nalbach, P.1    Thorwart, M.2
  • 185
    • 77952688137 scopus 로고    scopus 로고
    • Quantum superpositions in photosynthetic light-harvesting: Delocalization and entanglement
    • Ishizaki A and Fleming G R 2010 Quantum superpositions in photosynthetic light-harvesting: delocalization and entanglement New J. Phys. 12 055004
    • (2010) New J. Phys. , vol.12 , Issue.5
    • Ishizaki, A.1    Fleming, G.R.2
  • 186
    • 0036142391 scopus 로고    scopus 로고
    • Fluorescence depolarization dynamics in the B850 complex of purple bacteria
    • Kühn O, Sundström V and Pullerits T 2002 Fluorescence depolarization dynamics in the B850 complex of purple bacteria Chem. Phys. 275 15-30
    • (2002) Chem. Phys. , vol.275 , pp. 15-30
    • Kühn, O.1    Sundström, V.2    Pullerits, T.3
  • 187
    • 0000220848 scopus 로고    scopus 로고
    • Photosynthetic light-harvesting: Reconciling dynamics and structure of purple bacterial LH2 reveals function of photosynthetic unit
    • Sundström V, Pullerits T and van Grondelle R 1999 Photosynthetic light-harvesting: reconciling dynamics and structure of purple bacterial LH2 reveals function of photosynthetic unit J. Phys. Chem. B 103 2327-46
    • (1999) J. Phys. Chem. , vol.103 , pp. 2327-2346
    • Sundström, V.1    Pullerits, T.2    Van Grondelle, R.3
  • 188
    • 0000716234 scopus 로고
    • Two-time correlation functions of a system coupled to a heat bath with a Gaussian-Markoffian interaction
    • Tanimura Y and Kubo R 1989 Two-time correlation functions of a system coupled to a heat bath with a Gaussian-Markoffian interaction J. Phys. Soc. Japan 58 1199-206
    • (1989) J. Phys. Soc. Japan , vol.58 , pp. 1199-1206
    • Tanimura, Y.1    Kubo, R.2
  • 189
    • 67649132804 scopus 로고    scopus 로고
    • Unified treatment of quantum coherent and incoherent hopping dynamics in electronic energy transfer: Reduced hierarchy equation approach
    • Ishizaki A and Fleming G R 2009 Unified treatment of quantum coherent and incoherent hopping dynamics in electronic energy transfer: reduced hierarchy equation approach J. Chem. Phys. 130 234111
    • (2009) J. Chem. Phys. , vol.130
    • Ishizaki, A.1    Fleming, G.R.2
  • 191
    • 84871194610 scopus 로고    scopus 로고
    • Reduced hierarchy equations of motion approach with Drude plus brownian spectral distribution: Probing electron transfer processes by means of two-dimensional correlation spectroscopy
    • Tanimura Y 2012 Reduced hierarchy equations of motion approach with Drude plus brownian spectral distribution: probing electron transfer processes by means of two-dimensional correlation spectroscopy J. Chem. Phys. 137 22A550
    • (2012) J. Chem. Phys. , vol.137
    • Tanimura, Y.1
  • 192
    • 84865154923 scopus 로고    scopus 로고
    • Excited state dynamics in photosynthetic reaction centre and light-harvesting complex 1
    • Strümpfer J and Schulten K 2012 Excited state dynamics in photosynthetic reaction centre and light-harvesting complex 1 J. Chem. Phys. 137 065101
    • (2012) J. Chem. Phys. , vol.137
    • Strümpfer, J.1    Schulten, K.2
  • 193
    • 0041154589 scopus 로고    scopus 로고
    • The non-Markovian stochastic Schrödinger equation for open systems
    • Diósi L and Strunz W T 1997 The non-Markovian stochastic Schrödinger equation for open systems Phys. Lett. A 235 569-73
    • (1997) Phys. Lett. , vol.235 , pp. 569-573
    • Diósi, L.1    Strunz, W.T.2
  • 194
    • 18344393066 scopus 로고    scopus 로고
    • Non-Markovian quantum-state diffusion: Perturbation approach
    • Yu T, Diósi L, Gisin N and Strunz W 1999 Non-Markovian quantum-state diffusion: perturbation approach Phys. Rev. A 60 91-103
    • (1999) Phys. Rev. , vol.60 , pp. 91-103
    • Yu, T.1    Diósi, L.2    Gisin, N.3    Strunz, W.4
  • 196
    • 79960906093 scopus 로고    scopus 로고
    • Theory of multichromophoric coherent resonance energy transfer: A polaronic quantum master equation approach
    • Jang S 2011 Theory of multichromophoric coherent resonance energy transfer: a polaronic quantum master equation approach J. Chem. Phys. 135 034105
    • (2011) J. Chem. Phys. , vol.135
    • Jang, S.1
  • 197
    • 80155137139 scopus 로고    scopus 로고
    • Electronic excitation dynamics in multichromophoric systems described via a polaron-representation master equation
    • Kolli A, Nazir A and Olaya-Castro A 2011 Electronic excitation dynamics in multichromophoric systems described via a polaron-representation master equation J. Chem. Phys. 135 154112
    • (2011) J. Chem. Phys. , vol.135
    • Kolli, A.1    Nazir, A.2    Olaya-Castro, A.3
  • 198
    • 84903365384 scopus 로고    scopus 로고
    • Criteria for the accuracy of small polaron quantum master equation in simulating excitation energy transfer dynamics
    • Chang H-T, Zhang P-P and Cheng Y-C 2013 Criteria for the accuracy of small polaron quantum master equation in simulating excitation energy transfer dynamics J. Chem. Phys. 139 224112
    • (2013) J. Chem. Phys. , vol.139
    • Chang, H.-T.1    Zhang, P.-P.2    Cheng, Y.-C.3
  • 199
    • 70349909787 scopus 로고    scopus 로고
    • Correlation-dependent coherent to incoherent transitions in resonant energy transfer dynamics
    • Nazir A 2009 Correlation-dependent coherent to incoherent transitions in resonant energy transfer dynamics Phys. Rev. Lett. 103 146404
    • (2009) Phys. Rev. Lett. , vol.103
    • Nazir, A.1
  • 200
    • 79961123726 scopus 로고    scopus 로고
    • Coherent and incoherent dynamics in excitonic energy transfer: Correlated fluctuations and off-resonance effects
    • McCutcheon D P S and Nazir A 2011 Coherent and incoherent dynamics in excitonic energy transfer: correlated fluctuations and off-resonance effects Phys. Rev. B 83 165101
    • (2011) Phys. Rev. , vol.83
    • McCutcheon, D.P.S.1    Nazir, A.2
  • 201
    • 80053201286 scopus 로고    scopus 로고
    • Consistent treatment of coherent and incoherent energy transfer dynamics using a variational master equation
    • McCutcheon D P S and Nazir A 2011 Consistent treatment of coherent and incoherent energy transfer dynamics using a variational master equation J. Chem. Phys. 135 114501
    • (2011) J. Chem. Phys. , vol.135
    • McCutcheon, D.P.S.1    Nazir, A.2
  • 203
    • 0001727712 scopus 로고
    • Path integrals for dissipative systems by tensor multiplication. Condensed phase quantum dynamics for arbitrarily long time
    • Makarov D E and Makri N 1994 Path integrals for dissipative systems by tensor multiplication. Condensed phase quantum dynamics for arbitrarily long time Chem. Phys. Lett. 221 482-91
    • (1994) Chem. Phys. Lett. , vol.221 , pp. 482-491
    • Makarov, D.E.1    Makri, N.2
  • 204
    • 68949116445 scopus 로고    scopus 로고
    • Enhanced quantum entanglement in the non-Markovian dynamics of biomolecular excitons
    • Thorwart M, Eckel J, Reina J H, Nalbach P and Weiss S 2009 Enhanced quantum entanglement in the non-Markovian dynamics of biomolecular excitons Chem. Phys. Lett. 478 234-7
    • (2009) Chem. Phys. Lett. , vol.478 , pp. 234-237
    • Thorwart, M.1    Eckel, J.2    Reina, J.H.3    Nalbach, P.4    Weiss, S.5
  • 205
    • 79959660576 scopus 로고    scopus 로고
    • Iterative path-integral algorithm versus cumulant time-nonlocal master equation approach for dissipative biomolecular exciton transport
    • Nalbach P, Ishizaki A, Fleming G R and Thorwart M 2011 Iterative path-integral algorithm versus cumulant time-nonlocal master equation approach for dissipative biomolecular exciton transport New J. Phys. 13 063040
    • (2011) New J. Phys. , vol.13 , Issue.6
    • Nalbach, P.1    Ishizaki, A.2    Fleming, G.R.3    Thorwart, M.4
  • 206
    • 80055021923 scopus 로고    scopus 로고
    • Exciton transfer dynamics and quantumness of energy transfer in the Fenna-Matthews-Olson complex
    • Nalbach P, Braun D and Thorwart M 2011 Exciton transfer dynamics and quantumness of energy transfer in the Fenna-Matthews-Olson complex Phys. Rev. E 84 041926-6
    • (2011) Phys. Rev. , vol.84 , pp. 041926-041926
    • Nalbach, P.1    Braun, D.2    Thorwart, M.3
  • 207
  • 208
    • 84873411183 scopus 로고    scopus 로고
    • The role of non-equilibrium vibrational structures in electronic coherence and recoherence in pigment-protein complexes
    • Chin A W, Prior J, Rosenbach R, Caycedo-Soler F, Huelga S F and Plenio M B 2013 The role of non-equilibrium vibrational structures in electronic coherence and recoherence in pigment-protein complexes Nat. Phys. 9 113-6
    • (2013) Nat. Phys. , vol.9 , pp. 113-116
    • Chin, A.W.1    Prior, J.2    Rosenbach, R.3    Caycedo-Soler, F.4    Huelga, S.F.5    Plenio, M.B.6
  • 209
    • 80455158212 scopus 로고    scopus 로고
    • Physical basis for long-lived electronic coherence in photosynthetic light-harvesting systems
    • Pachón L A and Brumer P 2011 Physical basis for long-lived electronic coherence in photosynthetic light-harvesting systems J. Phys. Chem. Lett. 2 2728-32
    • (2011) J. Phys. Chem. Lett. , vol.2 , pp. 2728-2732
    • Pachón, L.A.1    Brumer, P.2
  • 210
    • 22744459657 scopus 로고
    • An intermediate neglect of differential overlap technique for spectroscopy: Pyrrole and the azines
    • Ridley J and Zerner M 1973 An intermediate neglect of differential overlap technique for spectroscopy: pyrrole and the azines Theor. Chim. Acta 32 111-34
    • (1973) Theor. Chim. Acta , vol.32 , pp. 111-134
    • Ridley, J.1    Zerner, M.2
  • 213
    • 84856693455 scopus 로고    scopus 로고
    • Atomistic study of the long-lived quantum coherences in the Fenna-Matthews-Olson complex
    • Shim S, Rebentrost P, Valleau S and Aspuru-Guzik A 2012 Atomistic study of the long-lived quantum coherences in the Fenna-Matthews-Olson complex Biophys. J. 102 649-60
    • (2012) Biophys. J. , vol.102 , pp. 649-660
    • Shim, S.1    Rebentrost, P.2    Valleau, S.3    Aspuru-Guzik, A.4
  • 214
    • 77957117252 scopus 로고    scopus 로고
    • Time-dependent atomistic view on the electronic relaxation in light-harvesting system II
    • Olbrich C and Kleinekathöfer U 2010 Time-dependent atomistic view on the electronic relaxation in light-harvesting system II J. Phys. Chem. B 114 12427-37
    • (2010) J. Phys. Chem. , vol.114 , pp. 12427-12437
    • Olbrich, C.1    Kleinekathöfer, U.2
  • 216
    • 80053237003 scopus 로고    scopus 로고
    • The optimization topography of exciton transport
    • Scholak T, Wellens T and Buchleitner A 2011 The optimization topography of exciton transport Europhys. Lett. 96 10001
    • (2011) Europhys. Lett. , vol.96 , Issue.1 , pp. 10001
    • Scholak, T.1    Wellens, T.2    Buchleitner, A.3
  • 217
    • 79952492971 scopus 로고    scopus 로고
    • Efficient and coherent excitation transfer across disordered molecular networks
    • Scholak T, de Melo F, Wellens T, Mintert F and Buchleitner A 2011 Efficient and coherent excitation transfer across disordered molecular networks Phys. Rev. E 83 021912
    • (2011) Phys. Rev. , vol.83
    • Scholak, T.1    De Melo, F.2    Wellens, T.3    Mintert, F.4    Buchleitner, A.5
  • 218
    • 84881567202 scopus 로고    scopus 로고
    • Structure-dynamics relationship in coherent transport through disordered systems
    • Mostarda S, Levi F, Prada-Gracia D, Mintert F and Rao F 2013 Structure-dynamics relationship in coherent transport through disordered systems Nat. Commun. 4 2296
    • (2013) Nat. Commun. , vol.4 , pp. 2296
    • Mostarda, S.1    Levi, F.2    Prada-Gracia, D.3    Mintert, F.4    Rao, F.5
  • 219
    • 0031571939 scopus 로고    scopus 로고
    • Pump-probe spectroscopy of dissipative energy transfer dynamics in photosynthetic antenna complexes: A density matrix approach
    • Kuhn O and Sundstrom V 1997 Pump-probe spectroscopy of dissipative energy transfer dynamics in photosynthetic antenna complexes: a density matrix approach J. Phys. Chem. Phys. 107 4154
    • (1997) J. Phys. Chem. Phys. , vol.107 , pp. 4154
    • Kuhn, O.1    Sundstrom, V.2
  • 221
    • 64349108096 scopus 로고    scopus 로고
    • Entanglement detection
    • Gühne O and Tóth G 2009 Entanglement detection Phys. Rep. 474 1-75
    • (2009) Phys. Rep. , vol.474 , pp. 1-75
    • Gühne, O.1    Tóth, G.2
  • 222
    • 84863642389 scopus 로고    scopus 로고
    • A critical view on transport and entanglement in models of photosynthesis
    • Tiersch M, Popescu S and Briegel H J 2012 A critical view on transport and entanglement in models of photosynthesis Phil. Trans. 370 3771-86
    • (2012) Phil. Trans. , vol.370 , pp. 3771-3786
    • Tiersch, M.1    Popescu, S.2    Briegel, H.J.3
  • 225
    • 84908110509 scopus 로고    scopus 로고
    • Observable measure of quantum coherence in finite dimensional systems
    • Girolami D 2014 Observable measure of quantum coherence in finite dimensional systems Phys. Rev. Lett. 113 170401
    • (2014) Phys. Rev. Lett. , vol.113
    • Girolami, D.1
  • 226
    • 84907200611 scopus 로고    scopus 로고
    • Method of developing analytical multipartite delocalization measures for mixed W-like states
    • Smyth C and Scholes G D 2014 Method of developing analytical multipartite delocalization measures for mixed W-like states Phys. Rev. A 90 032312
    • (2014) Phys. Rev. , vol.90
    • Smyth, C.1    Scholes, G.D.2
  • 229
    • 77956565396 scopus 로고    scopus 로고
    • Distribution of entanglement in light-harvesting complexes and their quantum efficiency
    • Fassioli F and Olaya-Castro A 2010 Distribution of entanglement in light-harvesting complexes and their quantum efficiency New J. Phys. 12 085006
    • (2010) New J. Phys. , vol.12 , Issue.8
    • Fassioli, F.1    Olaya-Castro, A.2
  • 230
    • 77956098934 scopus 로고    scopus 로고
    • Dynamic entanglement in oscillating molecules and potential biological implications
    • Cai J, Popescu S and Briegel H 2010 Dynamic entanglement in oscillating molecules and potential biological implications Phys. Rev. E 82 021921
    • (2010) Phys. Rev. , vol.82
    • Cai, J.1    Popescu, S.2    Briegel, H.3
  • 232
    • 80053237003 scopus 로고    scopus 로고
    • The optimization topography of exciton transport
    • Scholak T, Wellens T and Buchleitner A 2011 The optimization topography of exciton transport Europhys. Lett. 96 10001
    • (2011) Europhys. Lett. , vol.96 , Issue.1 , pp. 10001
    • Scholak, T.1    Wellens, T.2    Buchleitner, A.3
  • 234
    • 57249084574 scopus 로고    scopus 로고
    • Dephasing-assisted transport: Quantum networks and biomolecules
    • Plenio M B and Huelga S F 2008 Dephasing-assisted transport: quantum networks and biomolecules New J. Phys. 10 113019
    • (2008) New J. Phys. , vol.10 , Issue.11
    • Plenio, M.B.1    Huelga, S.F.2
  • 235
  • 236
    • 84864450285 scopus 로고    scopus 로고
    • Efficient estimation of energy transfer efficiency in light-harvesting complexes
    • Shabani A, Mohseni M, Rabitz H and Lloyd S 2012 Efficient estimation of energy transfer efficiency in light-harvesting complexes Phys. Rev. E 86 011915
    • (2012) Phys. Rev. , vol.86
    • Shabani, A.1    Mohseni, M.2    Rabitz, H.3    Lloyd, S.4
  • 237
    • 84899726430 scopus 로고    scopus 로고
    • Energy-scales convergence for optimal and robust quantum transport in photosynthetic complexes
    • Mohseni M, Shabani A, Lloyd S and Rabitz H 2014 Energy-scales convergence for optimal and robust quantum transport in photosynthetic complexes J. Chem. Phys. 140 035102
    • (2014) J. Chem. Phys. , vol.140
    • Mohseni, M.1    Shabani, A.2    Lloyd, S.3    Rabitz, H.4
  • 239
    • 67650838756 scopus 로고    scopus 로고
    • Role of quantum coherence and environmental fluctuations in chromophoric energy transport
    • Rebentrost P, Mohseni M and Aspuru-Guzik A 2009 Role of quantum coherence and environmental fluctuations in chromophoric energy transport J. Phys. Chem. B 113 9942-7
    • (2009) J. Phys. Chem. , vol.113 , pp. 9942-9947
    • Rebentrost, P.1    Mohseni, M.2    Aspuru-Guzik, A.3
  • 242
    • 77953608100 scopus 로고    scopus 로고
    • Noise-assisted energy transfer in quantum networks and light-harvesting complexes
    • Chin A W, Datta A, Caruso F, Huelga S F and Plenio M B 2010 Noise-assisted energy transfer in quantum networks and light-harvesting complexes New J. Phys. 12 065002
    • (2010) New J. Phys. , vol.12 , Issue.6
    • Chin, A.W.1    Datta, A.2    Caruso, F.3    Huelga, S.F.4    Plenio, M.B.5
  • 243
    • 82655183826 scopus 로고    scopus 로고
    • Quantum dynamics of bio-molecular systems in noisy environments
    • Huelga S F and Plenio M B 2011 Quantum dynamics of bio-molecular systems in noisy environments Proc. Chem. 3 248-57
    • (2011) Proc. Chem. , vol.3 , pp. 248-257
    • Huelga, S.F.1    Plenio, M.B.2
  • 244
    • 77954204088 scopus 로고    scopus 로고
    • Entanglement and entangling power of the dynamics in light-harvesting complexes
    • Caruso F, Chin A, Datta A, Huelga S and Plenio M 2010 Entanglement and entangling power of the dynamics in light-harvesting complexes Phys. Rev. A 81 062346
    • (2010) Phys. Rev. , vol.81
    • Caruso, F.1    Chin, A.2    Datta, A.3    Huelga, S.4    Plenio, M.5
  • 245
    • 70349287841 scopus 로고    scopus 로고
    • Highly efficient energy excitation transfer in light-harvesting complexes: The fundamental role of noise-assisted transport
    • Caruso F, Chin A W, Datta A, Huelga S F and Plenio M B 2009 Highly efficient energy excitation transfer in light-harvesting complexes: the fundamental role of noise-assisted transport J. Phys. Chem. Phys. 131 105106
    • (2009) J. Phys. Chem. Phys. , vol.131
    • Caruso, F.1    Chin, A.W.2    Datta, A.3    Huelga, S.F.4    Plenio, M.B.5
  • 246
    • 77955221910 scopus 로고    scopus 로고
    • Excitation dynamics in Phycoerythrin 545: Modeling of steady-state spectra and transient absorption with modified Redfield theory
    • Novoderezhkin V I, Doust A B, Curutchet C, Scholes G D and van Grondelle R 2010 Excitation dynamics in Phycoerythrin 545: modeling of steady-state spectra and transient absorption with modified Redfield theory Biophys. J. 99 344-52
    • (2010) Biophys. J. , vol.99 , pp. 344-352
    • Novoderezhkin, V.I.1    Doust, A.B.2    Curutchet, C.3    Scholes, G.D.4    Van Grondelle, R.5
  • 247
    • 72149107852 scopus 로고    scopus 로고
    • Exciton coherence and energy transport in the light-harvesting dimers of allophycocyanin
    • Womick J M and Moran A M 2009 Exciton coherence and energy transport in the light-harvesting dimers of allophycocyanin J. Phys. Chem. B 113 15747-59
    • (2009) J. Phys. Chem. , vol.113 , pp. 15747-15759
    • Womick, J.M.1    Moran, A.M.2
  • 248
    • 77955749723 scopus 로고    scopus 로고
    • Toward the origin of exciton electronic structure in phycobiliproteins
    • Womick J M, Miller S A and Moran A M 2010 Toward the origin of exciton electronic structure in phycobiliproteins J. Chem. Phys. 133 024507
    • (2010) J. Chem. Phys. , vol.133
    • Womick, J.M.1    Miller, S.A.2    Moran, A.M.3
  • 249
    • 84864435807 scopus 로고    scopus 로고
    • The role of discrete molecular modes in the coherent exciton dynamics in FMO
    • Nalbach P and Thorwart M 2012 The role of discrete molecular modes in the coherent exciton dynamics in FMO J. Phys. B: At. Mol. Opt. Phys. 45 154009
    • (2012) J. Phys. B: At. Mol. Opt. Phys. , vol.45 , Issue.15
    • Nalbach, P.1    Thorwart, M.2
  • 250
    • 84867173863 scopus 로고    scopus 로고
    • Long-lived electronic coherence in dissipative exciton dynamics of light-harvesting complexes
    • Kreisbeck C and Kramer T 2012 Long-lived electronic coherence in dissipative exciton dynamics of light-harvesting complexes J. Phys. Chem. Lett. 3 2828-33
    • (2012) J. Phys. Chem. Lett. , vol.3 , pp. 2828-2833
    • Kreisbeck, C.1    Kramer, T.2
  • 251
    • 79951525031 scopus 로고    scopus 로고
    • Vibronic enhancement of exciton sizes and energy transport in photosynthetic complexes
    • Womick J M and Moran A M 2011 Vibronic enhancement of exciton sizes and energy transport in photosynthetic complexes J. Phys. Chem. B 115 1347-56
    • (2011) J. Phys. Chem. , vol.115 , pp. 1347-1356
    • Womick, J.M.1    Moran, A.M.2
  • 252
    • 84856003771 scopus 로고    scopus 로고
    • Coherent vibronic coupling in light-harvesting complexes from photosynthetic marine algae
    • Richards G H, Wilk K E, Curmi P M G, Quiney H M and Davis J A 2012 Coherent vibronic coupling in light-harvesting complexes from photosynthetic marine algae J. Phys. Chem. Lett. 3 272-7
    • (2012) J. Phys. Chem. Lett. , vol.3 , pp. 272-277
    • Richards, G.H.1    Wilk, K.E.2    Curmi, P.M.G.3    Quiney, H.M.4    Davis, J.A.5
  • 254
    • 84868681932 scopus 로고    scopus 로고
    • The fundamental role of quantized vibrations in coherent light-harvesting by cryptophyte algae
    • Kolli A, O'Reilly E J, Scholes G D and Olaya-Castro A 2012 The fundamental role of quantized vibrations in coherent light-harvesting by cryptophyte algae J. Chem. Phys. 137 174109
    • (2012) J. Chem. Phys. , vol.137
    • Kolli, A.1    O'Reilly, E.J.2    Scholes, G.D.3    Olaya-Castro, A.4
  • 255
    • 70349909787 scopus 로고    scopus 로고
    • Correlation-dependent coherent to incoherent transitions in resonant energy transfer dynamics
    • Nazir A 2009 Correlation-dependent coherent to incoherent transitions in resonant energy transfer dynamics Phys. Rev. Lett. 103 1-4
    • (2009) Phys. Rev. Lett. , vol.103 , pp. 1-4
    • Nazir, A.1
  • 256
    • 77955084316 scopus 로고    scopus 로고
    • Limits of quantum speedup in photosynthetic light-harvesting
    • Hoyer S, Sarovar M and Birgitta K 2010 Limits of quantum speedup in photosynthetic light-harvesting New J. Phys. 12 065041
    • (2010) New J. Phys. , vol.12 , Issue.6
    • Hoyer, S.1    Sarovar, M.2    Birgitta, K.3
  • 257
    • 84861933276 scopus 로고    scopus 로고
    • Environment-assisted quantum transport in ordered systems
    • Kassal I and Aspuru-Guzik A 2012 Environment-assisted quantum transport in ordered systems New J. Phys. 14 053041
    • (2012) New J. Phys. , vol.14 , Issue.5
    • Kassal, I.1    Aspuru-Guzik, A.2
  • 258
    • 84867833014 scopus 로고    scopus 로고
    • Spatial propagation of excitonic coherence enables ratcheted energy transfer
    • Hoyer S, Ishizaki A and Whaley K 2012 Spatial propagation of excitonic coherence enables ratcheted energy transfer Phys. Rev. E 86 041911
    • (2012) Phys. Rev. , vol.86
    • Hoyer, S.1    Ishizaki, A.2    Whaley, K.3
  • 259
    • 84861696971 scopus 로고    scopus 로고
    • A resonance mechanism of efficient energy transfer mediated by Fenna-Matthews-Olson complex
    • Alicki R and Miklaszewski W 2012 A resonance mechanism of efficient energy transfer mediated by Fenna-Matthews-Olson complex J. Chem. Phys. 136 134103
    • (2012) J. Chem. Phys. , vol.136
    • Alicki, R.1    Miklaszewski, W.2
  • 260
    • 84890778704 scopus 로고    scopus 로고
    • Efficient biologically inspired photocell enhanced by delocalized quantum states
    • Creatore C, Parker M, Emmott S and Chin A W 2013 Efficient biologically inspired photocell enhanced by delocalized quantum states Phys. Rev. Lett. 111 253601
    • (2013) Phys. Rev. Lett. , vol.111
    • Creatore, C.1    Parker, M.2    Emmott, S.3    Chin, A.W.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.