-
1
-
-
0026320866
-
The energy landscapes and motions of proteins
-
Frauenfelder H, Sligar SG, Wolynes PG (1991) The energy landscapes and motions of proteins. Science 254:1598-1603.
-
(1991)
Science
, vol.254
, pp. 1598-1603
-
-
Frauenfelder, H.1
Sligar, S.G.2
Wolynes, P.G.3
-
2
-
-
36849039429
-
A hierarchy of timescales in protein dynamics is linked to enzyme catalysis
-
Henzler-Wildman KA, et al. (2007) A hierarchy of timescales in protein dynamics is linked to enzyme catalysis. Nature 450:913-916.
-
(2007)
Nature
, vol.450
, pp. 913-916
-
-
Henzler-Wildman, K.A.1
-
3
-
-
25844521524
-
Advances in kinetic protein crystallography
-
Bourgeois D, Royant A (2005) Advances in kinetic protein crystallography. Curr Opin Struct Biol 15:538-547.
-
(2005)
Curr Opin Struct Biol
, vol.15
, pp. 538-547
-
-
Bourgeois, D.1
Royant, A.2
-
4
-
-
12944269052
-
Specific chemical and structural damage to proteins produced by synchrotron radiation
-
Weik M, et al. (2000) Specific chemical and structural damage to proteins produced by synchrotron radiation. Proc Natl Acad Sci USA 97:623-628.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 623-628
-
-
Weik, M.1
-
5
-
-
0034654346
-
The 'fingerprint' that x-rays can leave on structures
-
Ravelli RB, McSweeney SM (2000) The 'fingerprint' that x-rays can leave on structures. Structure Fold Des 8:315-328.
-
(2000)
Structure Fold Des
, vol.8
, pp. 315-328
-
-
Ravelli, R.B.1
McSweeney, S.M.2
-
6
-
-
0034055545
-
Structural changes in a cryo-cooled protein crystal owing to radiation damage
-
Burmeister WP (2000) Structural changes in a cryo-cooled protein crystal owing to radiation damage. Acta Crystallogr D 56:328-341.
-
(2000)
Acta Crystallogr D
, vol.56
, pp. 328-341
-
-
Burmeister, W.P.1
-
7
-
-
33749179561
-
Radiation damage in macromolecular cryocrystallography
-
Ravelli RB, Garman EF (2006) Radiation damage in macromolecular cryocrystallography. Curr Opin Struct Biol 16:624-629.
-
(2006)
Curr Opin Struct Biol
, vol.16
, pp. 624-629
-
-
Ravelli, R.B.1
Garman, E.F.2
-
8
-
-
0037317546
-
Specific radiation damage can be used to solve macromolecular crystal structures
-
Ravelli RB, Leiros HK, Pan B, Caffrey M, McSweeney S (2003) Specific radiation damage can be used to solve macromolecular crystal structures. Structure 11:217-224.
-
(2003)
Structure
, vol.11
, pp. 217-224
-
-
Ravelli, R.B.1
Leiros, H.K.2
Pan, B.3
Caffrey, M.4
McSweeney, S.5
-
9
-
-
0034088779
-
The catalytic pathway of cytochrome p450cam at atomic resolution
-
Schlichting I, et al. (2000) The catalytic pathway of cytochrome p450cam at atomic resolution. Science 287:1615-1622.
-
(2000)
Science
, vol.287
, pp. 1615-1622
-
-
Schlichting, I.1
-
10
-
-
0034808210
-
Specific protein dynamics near the solvent glass transition assayed by radiation-induced structural changes
-
Weik M, et al. (2001) Specific protein dynamics near the solvent glass transition assayed by radiation-induced structural changes. Protein Sci 10:1953-1961.
-
(2001)
Protein Sci
, vol.10
, pp. 1953-1961
-
-
Weik, M.1
-
11
-
-
20644431973
-
Supercooled liquid-like solvent in trypsin crystals: Implications for crystal annealing and temperature-controlled X-ray radiation damage studies
-
Weik M, et al. (2005) Supercooled liquid-like solvent in trypsin crystals: Implications for crystal annealing and temperature-controlled X-ray radiation damage studies. J Synchrotron Radiat 12:310-317.
-
(2005)
J Synchrotron Radiat
, vol.12
, pp. 310-317
-
-
Weik, M.1
-
12
-
-
33846036476
-
Specific radiation damageto acidic residues and its relation to their chemical and structural environment
-
Fioravanti E, Vellieux FM, Amara P, Madern D, Weik M (2007) Specific radiation damageto acidic residues and its relation to their chemical and structural environment. J Synchrotron Radiat 14:84-91.
-
(2007)
J Synchrotron Radiat
, vol.14
, pp. 84-91
-
-
Fioravanti, E.1
Vellieux, F.M.2
Amara, P.3
Madern, D.4
Weik, M.5
-
13
-
-
0036452022
-
Specific damage induced by X-ray radiatioin and structural changes in the primary photoreaction of bacteriorhodopsin
-
Matsui Y, et al. (2002) Specific damage induced by X-ray radiatioin and structural changes in the primary photoreaction of bacteriorhodopsin. J Mol Biol 324:469-481.
-
(2002)
J Mol Biol
, vol.324
, pp. 469-481
-
-
Matsui, Y.1
-
14
-
-
11244354296
-
Specific radiation damage illustrates light-induced structural changes in the photosynthetic reaction center
-
Baxter RH, Seagle BL, Ponomarenko N, Norris JR (2004) Specific radiation damage illustrates light-induced structural changes in the photosynthetic reaction center.JAm Chem Soc 126:16728-16729.
-
(2004)
JAm Chem Soc
, vol.126
, pp. 16728-16729
-
-
Baxter, R.H.1
Seagle, B.L.2
Ponomarenko, N.3
Norris, J.R.4
-
15
-
-
24344492710
-
Oxidized and synchrotron cleaved structures of the disulfide redox center in the N-terminal domain of Salmonella typhimurium AhpF
-
Roberts BR, Wood ZA, Jonsson TJ, Poole LB, Karplus PA (2005) Oxidized and synchrotron cleaved structures of the disulfide redox center in the N-terminal domain of Salmonella typhimurium AhpF. Protein Sci 14:2414-2420.
-
(2005)
Protein Sci
, vol.14
, pp. 2414-2420
-
-
Roberts, B.R.1
Wood, Z.A.2
Jonsson, T.J.3
Poole, L.B.4
Karplus, P.A.5
-
16
-
-
33644870851
-
Is radiation damage dependent on the dose rate used during macromolecular crystallography data collection?
-
Leiros HK, Timmins J, Ravelli RB, McSweeney SM (2006) Is radiation damage dependent on the dose rate used during macromolecular crystallography data collection? Acta Crystallogr D 62:125-132.
-
(2006)
Acta Crystallogr D
, vol.62
, pp. 125-132
-
-
Leiros, H.K.1
Timmins, J.2
Ravelli, R.B.3
McSweeney, S.M.4
-
17
-
-
22444440389
-
Strain relief at the active site of phosphoserine aminotransferase induced by radiation damage
-
Dubnovitsky AP, Ravelli RB, Popov AN, Papageorgiou AC (2005) Strain relief at the active site of phosphoserine aminotransferase induced by radiation damage. Protein Sci 14:1498-1507.
-
(2005)
Protein Sci
, vol.14
, pp. 1498-1507
-
-
Dubnovitsky, A.P.1
Ravelli, R.B.2
Popov, A.N.3
Papageorgiou, A.C.4
-
18
-
-
18744414554
-
Acetylcholinesterase: 'Classical' and 'non-classical' functions and pharmacology
-
Silman I, Sussman JL (2005) Acetylcholinesterase: 'Classical' and 'non-classical' functions and pharmacology. Curr Opin Pharmacol 5:293-302.
-
(2005)
Curr Opin Pharmacol
, vol.5
, pp. 293-302
-
-
Silman, I.1
Sussman, J.L.2
-
19
-
-
0642309501
-
Acetylcholinesterase: A multifaceted target for structure-based drug design of anticholinesterase agents for the treatment of Alzheimer's disease
-
Greenblatt HM, Dvir H, Silman I, Sussman JL (2003) Acetylcholinesterase: a multifaceted target for structure-based drug design of anticholinesterase agents for the treatment of Alzheimer's disease. J Mol Neurosci 20:369-383.
-
(2003)
J Mol Neurosci
, vol.20
, pp. 369-383
-
-
Greenblatt, H.M.1
Dvir, H.2
Silman, I.3
Sussman, J.L.4
-
20
-
-
0031912487
-
Golden age of insecticide research: Past, present, or future?
-
Casida JE, Quistad GB (1998) Golden age of insecticide research: Past, present, or future? Annu Rev Entomol 43:1-16.
-
(1998)
Annu Rev Entomol
, vol.43
, pp. 1-16
-
-
Casida, J.E.1
Quistad, G.B.2
-
21
-
-
0028957265
-
Anticholinesterases: Medical applications of neurochemical principles
-
Millard CB, Broomfield CA (1995) Anticholinesterases: Medical applications of neurochemical principles. J Neurochem 64:1909-1918.
-
(1995)
J Neurochem
, vol.64
, pp. 1909-1918
-
-
Millard, C.B.1
Broomfield, C.A.2
-
22
-
-
0025778840
-
Atomic structure of acetylcholinesterase from Torpedo californica: A prototypic acetylcholine-binding protein
-
Sussman JL, et al. (1991) Atomic structure of acetylcholinesterase from Torpedo californica: A prototypic acetylcholine-binding protein. Science 253:872-879.
-
(1991)
Science
, vol.253
, pp. 872-879
-
-
Sussman, J.L.1
-
23
-
-
0027265211
-
An electrostatic mechanism for substrate guidance down the aromatic gorge of acetylcholinesterase
-
Ripoll DR, Faerman CH, Axelsen PH, Silman I, Sussman JL (1993) An electrostatic mechanism for substrate guidance down the aromatic gorge of acetylcholinesterase. Proc Natl Acad Sci USA 90:5128-5132.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 5128-5132
-
-
Ripoll, D.R.1
Faerman, C.H.2
Axelsen, P.H.3
Silman, I.4
Sussman, J.L.5
-
24
-
-
0028179616
-
Open "back door" in a molecular dynamics simulation of acethylcholinesterase
-
Gilson MK, et al. (1994) Open "back door" in a molecular dynamics simulation of acethylcholinesterase. Science 263:1276-1278.
-
(1994)
Science
, vol.263
, pp. 1276-1278
-
-
Gilson, M.K.1
-
25
-
-
33745550034
-
Structural insights into substrate traffic and inhibition in acetylcholinesterase
-
Colletier JP, et al. (2006) Structural insights into substrate traffic and inhibition in acetylcholinesterase. EMBO J 25:2746-2756.
-
(2006)
EMBO J
, vol.25
, pp. 2746-2756
-
-
Colletier, J.P.1
-
26
-
-
33749402097
-
-
Bourne Y, et el. (2006) Substrate and product trafficking through the active center gorge of acetylcholinesterase analyzed by crystallography and equilibrium binding. J Biol Chem 281:29256-29267.
-
Bourne Y, et el. (2006) Substrate and product trafficking through the active center gorge of acetylcholinesterase analyzed by crystallography and equilibrium binding. J Biol Chem 281:29256-29267.
-
-
-
-
27
-
-
36248987741
-
Use of a 'caged' analogue to study the traffic of choline within acetylcholinesterase by kinetic crystallography
-
Colletier JP, et al. (2007) Use of a 'caged' analogue to study the traffic of choline within acetylcholinesterase by kinetic crystallography. Acta Crystallogr D 63:1115-1128.
-
(2007)
Acta Crystallogr D
, vol.63
, pp. 1115-1128
-
-
Colletier, J.P.1
-
28
-
-
33645498518
-
Experimental determination of the radiation dose limit for cryocooled protein crystals
-
Owen RL, Rudino-Pinera E, Garman EF (2006) Experimental determination of the radiation dose limit for cryocooled protein crystals. Proc Natl Acad Sci USA 103:4912-4917.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 4912-4917
-
-
Owen, R.L.1
Rudino-Pinera, E.2
Garman, E.F.3
-
29
-
-
0014235891
-
The catalytic and regulatory properties of enzymes
-
Koshland DE, Jr, Neet KE (1968) The catalytic and regulatory properties of enzymes. Annu Rev Biochem 37:359-410.
-
(1968)
Annu Rev Biochem
, vol.37
, pp. 359-410
-
-
Koshland Jr, D.E.1
Neet, K.E.2
-
30
-
-
0040986148
-
An electron spin resonance study of .gamma.-irradiated frozen aqueous solutions containing N-acetylamino acids
-
Sevilla MD, D'Arcy JB, Morehouse KM (1979) An electron spin resonance study of .gamma.-irradiated frozen aqueous solutions containing N-acetylamino acids. J Phys Chem 83:2893-2897.
-
(1979)
J Phys Chem
, vol.83
, pp. 2893-2897
-
-
Sevilla, M.D.1
D'Arcy, J.B.2
Morehouse, K.M.3
-
31
-
-
25844509913
-
Ultrafast and low barrier motions in the photoreactions of the green fluorescent protein
-
Van Thor JJ, Georgiev GY, Towrie M, Sage JT (2005) Ultrafast and low barrier motions in the photoreactions of the green fluorescent protein. J Biol Chem 280:33652-33659.
-
(2005)
J Biol Chem
, vol.280
, pp. 33652-33659
-
-
Van Thor, J.J.1
Georgiev, G.Y.2
Towrie, M.3
Sage, J.T.4
-
32
-
-
5144223810
-
Bulk-solvent and hydration-shell fluctuations, similar to α- and β-fluctuations in glasses, control protein motions and functions
-
Fenimore PW, Frauenfelder H, McMahon BH, Young RD (2004) Bulk-solvent and hydration-shell fluctuations, similar to α- and β-fluctuations in glasses, control protein motions and functions. Proc Natl Acad Sci USA 101:14408-14413.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 14408-14413
-
-
Fenimore, P.W.1
Frauenfelder, H.2
McMahon, B.H.3
Young, R.D.4
-
33
-
-
41849097415
-
Coincidence of dynamical transitions in a soluble protein and its hydration water: Direct measurements by neutron scattering and MD simulations
-
Wood K, et al. (2008) Coincidence of dynamical transitions in a soluble protein and its hydration water: Direct measurements by neutron scattering and MD simulations. J Am Chem Soc 130:4586-4587.
-
(2008)
J Am Chem Soc
, vol.130
, pp. 4586-4587
-
-
Wood, K.1
-
34
-
-
0142039868
-
Crystal structure of human butyrylcholinesterase and of its complexes with substrate and products
-
Nicolet Y, Lockridge O, Masson P, Fontecilla-Camps JC, Nachon F (2003) Crystal structure of human butyrylcholinesterase and of its complexes with substrate and products. J Biol Chem 278:41141-41147.
-
(2003)
J Biol Chem
, vol.278
, pp. 41141-41147
-
-
Nicolet, Y.1
Lockridge, O.2
Masson, P.3
Fontecilla-Camps, J.C.4
Nachon, F.5
-
35
-
-
0142223221
-
The three-dimensional structure of the liver Xr eceptor beta reveals a flexible ligand-binding pocket that can accommodate fundamentally different ligands
-
Farnegardh M, et al. (2003) The three-dimensional structure of the liver Xr eceptor beta reveals a flexible ligand-binding pocket that can accommodate fundamentally different ligands. J Biol Chem 278:38821-38828.
-
(2003)
J Biol Chem
, vol.278
, pp. 38821-38828
-
-
Farnegardh, M.1
-
36
-
-
0001546886
-
Improved estimation of structure-factor difference amplitudes from poorly accurate data
-
Ursby T, Bourgeois D (1997) Improved estimation of structure-factor difference amplitudes from poorly accurate data. Acta Crystallogr A 53:564-575.
-
(1997)
Acta Crystallogr A
, vol.53
, pp. 564-575
-
-
Ursby, T.1
Bourgeois, D.2
-
37
-
-
0024418705
-
Interaction of quaternary ammonium compounds with acetylcholinesterase: Characterization of the active site
-
Thanei-Wyss P, Waser PG (1989) Interaction of quaternary ammonium compounds with acetylcholinesterase: Characterization of the active site. Eur J Pharmacol 172:165-173.
-
(1989)
Eur J Pharmacol
, vol.172
, pp. 165-173
-
-
Thanei-Wyss, P.1
Waser, P.G.2
-
38
-
-
0024279312
-
Purification and crystallization of a dimeric form of acetylcholinesterase from Torpedo californica subsequent to solubilization with phosphatidylinositol-specific phospholipase C
-
Sussman JL, et al. (1988) Purification and crystallization of a dimeric form of acetylcholinesterase from Torpedo californica subsequent to solubilization with phosphatidylinositol-specific phospholipase C. J Mol Biol 203:821-823.
-
(1988)
J Mol Biol
, vol.203
, pp. 821-823
-
-
Sussman, J.L.1
-
39
-
-
0027879008
-
Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants
-
Kabsch W (1993) Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants. J Appl Crystallogr 26:795-800.
-
(1993)
J Appl Crystallogr
, vol.26
, pp. 795-800
-
-
Kabsch, W.1
-
40
-
-
4043099008
-
X-ray absorption by macromolecular crystals: The effects of wavelength and crystal composition on absorbed dose
-
Murray JW, Garman EF, Ravelli RBG (2004) X-ray absorption by macromolecular crystals: The effects of wavelength and crystal composition on absorbed dose. J Appl Crystallogr 37:513-522.
-
(2004)
J Appl Crystallogr
, vol.37
, pp. 513-522
-
-
Murray, J.W.1
Garman, E.F.2
Ravelli, R.B.G.3
-
41
-
-
9644287712
-
The complex of a bivalent derivative of galanthamine with Torpedo acetylcholinesterase displays drastic deformation of the active-site gorge: Implications for structure-based drug design
-
Greenblatt HM, et al. (2004) The complex of a bivalent derivative of galanthamine with Torpedo acetylcholinesterase displays drastic deformation of the active-site gorge: Implications for structure-based drug design. J Am Chem Soc 126:15405-15411.
-
(2004)
J Am Chem Soc
, vol.126
, pp. 15405-15411
-
-
Greenblatt, H.M.1
-
42
-
-
13244281317
-
COOT: Model-building tools for molecular graphics
-
Emsley P, Cowtan K (2004) COOT: Model-building tools for molecular graphics. Acta Crystallogr D 60:2126-2132.
-
(2004)
Acta Crystallogr D
, vol.60
, pp. 2126-2132
-
-
Emsley, P.1
Cowtan, K.2
-
43
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination
-
Brunger AT, et al. (1998) Crystallography & NMR system: A new software suite for macromolecular structure determination. Acta Crystallogr D 54:905-921.
-
(1998)
Acta Crystallogr D
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
-
45
-
-
7544226311
-
PRODRG: A tool for high-throughput crystallography of protein-ligand complexes
-
Schuttelkopf AW, van Aalten DM (2004) PRODRG: A tool for high-throughput crystallography of protein-ligand complexes. Acta Crystallogr D 60:1355-1363.
-
(2004)
Acta Crystallogr D
, vol.60
, pp. 1355-1363
-
-
Schuttelkopf, A.W.1
van Aalten, D.M.2
|