Energy transfer between carotenoids and bacteriochlorophylls in light-harvesting complex II of purple bacteria

Physical Review E - Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics

Volumn 59, Issue 3, 1999, Pages 3293-3311

  Damjanović, Ana ^a   Ritz, Thorsten ^a   Schulten, Klaus ^a  

^a University of Illinois at Urbana Champaign   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 0001567643     PISSN: 1063651X     EISSN: None     Source Type: Journal    
DOI: 10.1103/PhysRevE.59.3293     Document Type: Article

References (70)

1. X. Hu and K. Schulten, Phys. Today 50 (8), 28 (1997).
2. X. Hu, A. Damjanović, T. Ritz, and K. Schulten, Proc. Natl. Acad. Sci. USA 95, 5935 (1998).
3. E. Hofmann, Science 272, 1788 (1996).
4. M. Griffiths, W. Sistrom, G. Cohen-Bazire, and R. Y. Stanier, Nature (London) 176, 1211 (1955).
5. W. R. Sistrom, M. Griffiths, and R. Y. Stanier, J. Cell. Comp. Physiol. 48, 473 (1956).
6. N. I. Krinsky, Pure Appl. Chem. 51, 649 (1979).
7. R. J. Cogdell and H. A. Frank, Biochim. Biophys. Acta 895, 63 (1987).
8. N. A. Krinsky, in The Survival of Vegetative Microbes, edited by T. G. R. Gray and J. R. Postgate (Cambridge Univ. Press, Cambridge, 1976), pp. 209–239.
9. G. McDermott, Nature (London) 374, 517 (1995).
10. J. Koepke, Structure4, 581 (1996).
11. A. P. Shreve, Biochim. Biophys. Acta 1058, 280 (1991).
12. X. Hu, T. Ritz, A. Damjanović, and K. Schulten, J. Phys. Chem. B 101, 3854 (1997).
13. M. Kuki, H. Nagae, R. Cogdell, and Y. Koyama, Photochem. Photobiol. 59, 116 (1994).
14. P. Tavan and K. Schulten, J. Chem. Phys. 85, 6602 (1986).
15. B. S. Hudson, B. E. Kohler, and K. Schulten, in Excited States, edited by E. C. Lim (Academic Press, New York, 1982), Vol. 6, pp. 1–95.
16. P. Tavan and K. Schulten, J. Chem. Phys. 70, 5407 (1979).
17. P. Tavan and K. Schulten, Phys. Rev. B 36, 4337 (1987).
18. P. Tavan and K. Schulten, in Nonlinear Optical Properties of Polymers, MRS Symposium Proceedings No. 109, edited by A. J. Heeger, J. Orenstein, and D. Ulrich (Materials Research Society, Pittsburgh, 1988), pp. 163–170.
19. T. Gillbro, Photochem. Photobiol. 57, 44 (1993).
20. Y. Koyama, M. Kuki, P. Andersson, and T. Gillbro, Photochem. Photobiol. 63, 243 (1996).
21. B. W. Chadwick, C. Zhang, R. J. Cogdell, and H. A. Frank, Biochim. Biophys. Acta 893, 444 (1987).
22. A. P. Shreve, J. K. Trautman, T. G. Owens, and A. C. Albrecht, Chem. Phys. Lett. 178, 89 (1991).
23. M. Ricci, S. E. Bradforth, R. Jimenez, and G. R. Fleming, Chem. Phys. Lett. 259, 381 (1996).
24. T. Sashima, H. Nagae, M. Kuki, and Y. Koyama (unpublished).
25. T. Förster, Ann. Phys. (Leipzig) 2, 55 (1948).
26. B. P. Krueger, G. D. Scholes, and G. R. Fleming, J. Phys. Chem. B 102, 5378 (1998).
27. H. Nagae, T. Kakitani, T. Katohi, and M. Mimuro, J. Chem. Phys. 98, 8012 (1993).
28. D.L. Dexter, J. Chem. Phys. 21, 836 (1963)
29. R. van Grondelle, J. Dekker, T. Gillbro, and V. Sundstrom, Biochim. Biophys. Acta 1187, 1 (1994).
30. K. R. Naqvi, Photochem. Photobiol. 31, 523 (1980).
31. C. S. Foote, Y. C. Chang, and R. W. Denny, J. Am. Chem. Soc. 92, 5216 (1970).
32. C. S. Foote, Free Radicals Biol. 2, 85 (1976).
33. M. Chessin, R. Livingston, and T. G. Truscott, Trans. Faraday Soc. 62, 1519 (1966).
34. H. T. Witt, Q. Rev. Biophys. 4, 365 (1971).
35. R. Bensasson, E. J. Land, and B. Maudinas, Photochem. Photobiol. 23, 189 (1976).
36. P. Mathis and J. Kleo, Photochem. Photobiol. 18, 343 (1973).
37. H. Claes and T. O. M. Nakayama, Z. Naturforsch. B 14, 746 (1959).
38. H. Claes, Biochem. Biophys. Res. Commun. 3, 585 (1960).
39. M. M. Mathews-Roth and N. I. Krinsky, Photochem. Photobiol. 11, 419 (1970).
40. T. G. Monger, R. J. Cogdell, and W. W. Parson, Biochim. Biophys. Acta 449, 136 (1976).
41. K. Schulten, I. Ohmine, and M. Karplus, J. Chem. Phys. 64, 4422 (1976).
42. K. Schulten and M. Karplus, Chem. Phys. Lett. 14, 305 (1972).
43. W. Weber, Ph.D. thesis, Universität Zürich, Philosphische Fakultät II, Zürich, Switzerland, 1996.
44. G. D. Scholes, K. P. Ghiggino, A. M. Oliver, and M. N. Padden-Row, J. Phys. Chem. 87, 11 871 (1993).
45. S. Larsson, J. Am. Chem. Soc. 103, 4034 (1981).
46. Author(s), in QUANTA 97 (Molecular Simulations Inc., Burlington, Massachusetts, 1997).
47. J. Jortner, S. A. Rice, and J. L. Katz, J. Chem. Phys. 42, 309 (1965).
48. A. Szabo and N. Ostlund, Modern Quantum Chemistry: Introduction to Advanced Electronic Structure Theory (MacMillan, New York, 1982).
49. CERN Program Library Long Writeup Y250, CERN, 1994.
50. J. O. Hirschfelder and J. W. Linnett, J. Chem. Phys. 18, 130 (1949).
51. M. C. Zerner, M. G. Cory, X. Hu, and K. Schulten, J. Phys. Chem. B 102, 7640 (1998).
52. H. Wu and G. Small, J. Phys. Chem. 102, 888 (1998).
53. L. Germeroth, F. Lottspeich, B. Robert, and H. Michel, Biochemistry 32, 5615 (1993).
54. H. Frank, Pure Appl. Chem. 68, 2117 (1997).
55. M. Mimuro, Biochim. Biophys. Acta 1098, 271 (1992).
56. C. D. Caro, R. W. Visschers, R. van Grondelle, and S. Völker, J. Phys. Chem. 98, 10 584 (1994).
57. P. O. Anderson, T. Gillbro, L. Ferguson, and R. J. Cogdell, Photochem. Photobiol. 54, 353 (1991).
58. K. Sauer, J. R. L. Smith, and A. J. Schultz, J. Am. Chem. Soc. 88, 2681 (1966).
59. R. J. Cogdell, P. O. Andersson, and T. Gillbro, J. Photochem. Photobiol., B 15, 105 (1992).
60. H. Frank and R. Cogdell, Photochem. Photobiol. 63, 257 (1996).
61. Z. Zhang, Nature (London) 392, 677 (1998).
62. R. Jimenez, S. Dikshit, S. Bradforth, and G. Fleming, J. Phys. Chem. 100, 6825 (1996).
63. D. Leupold, Phys. Rev. Lett. 77, 4675 (1996).
64. P. D. Laible, Biophys. J. 74, 2623 (1998).
65. W. Kuhlbrandt, in Membrane Protein Structure: Experimental Approaches, edited by S. White (Oxford University Press, New York, 1994), pp. 206–223.
66. J. B. Arellano, R. B. Raju, K. R. Naqvi, and T. Gillbro, Photochem. Photobiol. 68, 84 (1998).
67. J. Cizek, J. Paldus, and I. Hubac, Int. J. Quantum Chem. 8, 951 (1974).
68. J. Koutecky, J. Chem. Phys. 44, 3702 (1996).
69. R. Pariser, J. Chem. Phys. 24, 250 (1956).
70. W. F. Humphrey, A. Dalke, and K. Schulten, J. Mol. Graphics 14, 33 (1996).