-
2
-
-
84871924245
-
Immunohistochemistry in the era of personalised medicine
-
[CrossRef] [PubMed]
-
McCourt, C. M.; Boyle, D.; James, J.; Salto-Tellez, M. Immunohistochemistry in the era of personalised medicine. J. Clin. Pathol. 2013, 66, 58-61. [CrossRef] [PubMed].
-
(2013)
J. Clin. Pathol
, vol.66
, pp. 58-61
-
-
McCourt, C.M.1
Boyle, D.2
James, J.3
Salto-Tellez, M.4
-
3
-
-
0034327895
-
Assessment of methods for tissue-based detection of the her-2/neu alteration in human breast cancer: A direct comparison of fluorescence in situ hybridization and immunohistochemistry
-
[PubMed]
-
Pauletti, G.; Dandekar, S.; Rong, H.; Ramos, L.; Peng, H.; Seshadri, R.; Slamon, D. J. Assessment of methods for tissue-based detection of the her-2/neu alteration in human breast cancer: A direct comparison of fluorescence in situ hybridization and immunohistochemistry. J. Clin. Oncol. 2000, 18, 3651-3664. [PubMed].
-
(2000)
J. Clin. Oncol
, vol.18
, pp. 3651-3664
-
-
Pauletti, G.1
Dandekar, S.2
Rong, H.3
Ramos, L.4
Peng, H.5
Seshadri, R.6
Slamon, D.J.7
-
4
-
-
0035863284
-
Her-2/neu analysis in archival tissue samples of human breast cancer: Comparison of immunohistochemistry and fluorescence in situ hybridization
-
[PubMed]
-
Lebeau, A.; Deimling, D.; Kaltz, C.; Sendelhofert, A.; Iff, A.; Luthardt, B.; Untch, M.; Lohrs, U. Her-2/neu analysis in archival tissue samples of human breast cancer: Comparison of immunohistochemistry and fluorescence in situ hybridization. J. Clin. Oncol. 2001, 19, 354-363. [PubMed].
-
(2001)
J. Clin. Oncol
, vol.19
, pp. 354-363
-
-
Lebeau, A.1
Deimling, D.2
Kaltz, C.3
Sendelhofert, A.4
Iff, A.5
Luthardt, B.6
Untch, M.7
Lohrs, U.8
-
5
-
-
77951725120
-
A commercial real-time pcr kit provides greater sensitivity than direct sequencing to detect kras mutations: A morphology-based approach in colorectal carcinoma
-
[CrossRef] [PubMed]
-
Angulo, B.; Garcia-Garcia, E.; Martinez, R.; Suarez-Gauthier, A.; Conde, E.; Hidalgo, M.; Lopez-Rios, F. A commercial real-time pcr kit provides greater sensitivity than direct sequencing to detect kras mutations: A morphology-based approach in colorectal carcinoma. J. Mol. Diagn. 2010, 12, 292-299. [CrossRef] [PubMed].
-
(2010)
J. Mol. Diagn
, vol.12
, pp. 292-299
-
-
Angulo, B.1
Garcia-Garcia, E.2
Martinez, R.3
Suarez-Gauthier, A.4
Conde, E.5
Hidalgo, M.6
Lopez-Rios, F.7
-
6
-
-
84863723714
-
A comparison of three methods for detecting kras mutations in formalin-fixed colorectal cancer specimens
-
[CrossRef] [PubMed]
-
Gonzalez de Castro, D.; Angulo, B.; Gomez, B.; Mair, D.; Martinez, R.; Suarez-Gauthier, A.; Shieh, F.; Velez, M.; Brophy, V. H.; Lawrence, H. J.; et al. A comparison of three methods for detecting kras mutations in formalin-fixed colorectal cancer specimens. Br. J. Cancer 2012, 107, 345-351. [CrossRef] [PubMed].
-
(2012)
Br. J. Cancer
, vol.107
, pp. 345-351
-
-
Gonzalez de Castro, D.1
Angulo, B.2
Gomez, B.3
Mair, D.4
Martinez, R.5
Suarez-Gauthier, A.6
Shieh, F.7
Velez, M.8
Brophy, V.H.9
Lawrence, H.J.10
-
7
-
-
84872257074
-
Comparison of testing methods for the detection of braf v600e mutations in malignant melanoma: Pre-approval validation study of the companion diagnostic test for vemurafenib
-
[CrossRef] [PubMed]
-
Lopez-Rios, F.; Angulo, B.; Gomez, B.; Mair, D.; Martinez, R.; Conde, E.; Shieh, F.; Vaks, J.; Langland, R.; Lawrence, H. J.; et al. Comparison of testing methods for the detection of braf v600e mutations in malignant melanoma: Pre-approval validation study of the companion diagnostic test for vemurafenib. PLoS ONE 2013, 8, e53733. [CrossRef] [PubMed].
-
(2013)
PLoS ONE
, vol.8
-
-
Lopez-Rios, F.1
Angulo, B.2
Gomez, B.3
Mair, D.4
Martinez, R.5
Conde, E.6
Shieh, F.7
Vaks, J.8
Langland, R.9
Lawrence, H.J.10
-
8
-
-
84877950429
-
A multigene expression assay to predict local recurrence risk for ductal carcinoma in situ of the breast
-
[CrossRef] [PubMed]
-
Solin, L. J.; Gray, R.; Baehner, F. L.; Butler, S. M.; Hughes, L. L.; Yoshizawa, C.; Cherbavaz, D. B.; Shak, S.; Page, D. L.; Sledge, G. W., Jr.; et al. A multigene expression assay to predict local recurrence risk for ductal carcinoma in situ of the breast. J. Natl. Cancer Inst. 2013, 105, 701-710. [CrossRef] [PubMed].
-
(2013)
J. Natl. Cancer Inst
, vol.105
, pp. 701-710
-
-
Solin, L.J.1
Gray, R.2
Baehner, F.L.3
Butler, S.M.4
Hughes, L.L.5
Yoshizawa, C.6
Cherbavaz, D.B.7
Shak, S.8
Page, D.L.9
Sledge, G.W.10
-
9
-
-
84907090849
-
-
(accessed on 15 May 2015)
-
Cobas 4800 braf v600 mutation test. Available online: http://molecular. roche. com/assays/Pages/cobas4800BRAFV600MutationTest. aspx (accessed on 15 May 2015).
-
Cobas 4800 braf v600 mutation test
-
-
-
10
-
-
84937391927
-
-
(accessed on 15 May 2015)
-
Cobas egfr mutation test. Available online: http://molecular. roche. com/assays/Pages/cobasEGFRMutationTest. aspx (accessed on 15 May 2015).
-
Cobas egfr mutation test
-
-
-
11
-
-
34447295638
-
Chromogenic and fluorescent in situ hybridization in breast cancer
-
[CrossRef] [PubMed]
-
Lambros, M. B.; Natrajan, R.; Reis-Filho, J. S. Chromogenic and fluorescent in situ hybridization in breast cancer. Hum. Pathol. 2007, 38, 1105-1122. [CrossRef] [PubMed].
-
(2007)
Hum. Pathol
, vol.38
, pp. 1105-1122
-
-
Lambros, M.B.1
Natrajan, R.2
Reis-Filho, J.S.3
-
12
-
-
77749295019
-
Out of the darkness and into the light: Bright field in situ hybridisation for delineation of erbb2 (her2) status in breast carcinoma
-
[CrossRef] [PubMed]
-
Gruver, A. M.; Peerwani, Z.; Tubbs, R. R. Out of the darkness and into the light: Bright field in situ hybridisation for delineation of erbb2 (her2) status in breast carcinoma. J. Clin. Pathol. 2010, 63, 210-219. [CrossRef] [PubMed].
-
(2010)
J. Clin. Pathol
, vol.63
, pp. 210-219
-
-
Gruver, A.M.1
Peerwani, Z.2
Tubbs, R.R.3
-
13
-
-
35348988679
-
Paired-end mapping reveals extensive structural variation in the human genome
-
[CrossRef] [PubMed]
-
Korbel, J. O.; Urban, A. E.; Affourtit, J. P.; Godwin, B.; Grubert, F.; Simons, J. F.; Kim, P. M.; Palejev, D.; Carriero, N. J.; Du, L.; et al. Paired-end mapping reveals extensive structural variation in the human genome. Science 2007, 318, 420-426. [CrossRef] [PubMed].
-
(2007)
Science
, vol.318
, pp. 420-426
-
-
Korbel, J.O.1
Urban, A.E.2
Affourtit, J.P.3
Godwin, B.4
Grubert, F.5
Simons, J.F.6
Kim, P.M.7
Palejev, D.8
Carriero, N.J.9
Du, L.10
-
14
-
-
74449093973
-
A comprehensive catalogue of somatic mutations from a human cancer genome
-
[CrossRef] [PubMed]
-
Pleasance, E. D.; Cheetham, R. K.; Stephens, P. J.; McBride, D. J.; Humphray, S. J.; Greenman, C. D.; Varela, I.; Lin, M. L.; Ordonez, G. R.; Bignell, G. R.; et al. A comprehensive catalogue of somatic mutations from a human cancer genome. Nature 2010, 463, 191-196. [CrossRef] [PubMed].
-
(2010)
Nature
, vol.463
, pp. 191-196
-
-
Pleasance, E.D.1
Cheetham, R.K.2
Stephens, P.J.3
McBride, D.J.4
Humphray, S.J.5
Greenman, C.D.6
Varela, I.7
Lin, M.L.8
Ordonez, G.R.9
Bignell, G.R.10
-
15
-
-
69549116107
-
Breakdancer: An algorithm for high-resolution mapping of genomic structural variation
-
[CrossRef] [PubMed]
-
Chen, K.; Wallis, J. W.; McLellan, M. D.; Larson, D. E.; Kalicki, J. M.; Pohl, C. S.; McGrath, S. D.; Wendl, M. C.; Zhang, Q.; Locke, D. P.; et al. Breakdancer: An algorithm for high-resolution mapping of genomic structural variation. Nat. Methods 2009, 6, 677-681. [CrossRef] [PubMed].
-
(2009)
Nat. Methods
, vol.6
, pp. 677-681
-
-
Chen, K.1
Wallis, J.W.2
McLellan, M.D.3
Larson, D.E.4
Kalicki, J.M.5
Pohl, C.S.6
McGrath, S.D.7
Wendl, M.C.8
Zhang, Q.9
Locke, D.P.10
-
16
-
-
58149218240
-
High-resolution mapping of copy-number alterations with massively parallel sequencing
-
[CrossRef] [PubMed]
-
Chiang, D. Y.; Getz, G.; Jaffe, D. B.; O'Kelly, M. J.; Zhao, X.; Carter, S. L.; Russ, C.; Nusbaum, C.; Meyerson, M.; Lander, E. S. High-resolution mapping of copy-number alterations with massively parallel sequencing. Nat. Methods 2009, 6, 99-103. [CrossRef] [PubMed].
-
(2009)
Nat. Methods
, vol.6
, pp. 99-103
-
-
Chiang, D.Y.1
Getz, G.2
Jaffe, D.B.3
O'Kelly, M.J.4
Zhao, X.5
Carter, S.L.6
Russ, C.7
Nusbaum, C.8
Meyerson, M.9
Lander, E.S.10
-
17
-
-
84865833740
-
High-throughput detection of actionable genomic alterations in clinical tumor samples by targeted, massively parallel sequencing
-
[CrossRef] [PubMed]
-
Wagle, N.; Berger, M. F.; Davis, M. J.; Blumenstiel, B.; Defelice, M.; Pochanard, P.; Ducar, M.; van Hummelen, P.; Macconaill, L. E.; Hahn, W. C.; et al. High-throughput detection of actionable genomic alterations in clinical tumor samples by targeted, massively parallel sequencing. Cancer Discov. 2011, 2, 82-93. [CrossRef] [PubMed].
-
(2011)
Cancer Discov
, vol.2
, pp. 82-93
-
-
Wagle, N.1
Berger, M.F.2
Davis, M.J.3
Blumenstiel, B.4
Defelice, M.5
Pochanard, P.6
Ducar, M.7
van Hummelen, P.8
Macconaill, L.E.9
Hahn, W.C.10
-
18
-
-
84887491073
-
Development and validation of a clinical cancer genomic profiling test based on massively parallel DNA sequencing
-
[CrossRef] [PubMed]
-
Frampton, G. M.; Fichtenholtz, A.; Otto, G. A.; Wang, K.; Downing, S. R.; He, J.; Schnall-Levin, M.; White, J.; Sanford, E. M.; An, P.; et al. Development and validation of a clinical cancer genomic profiling test based on massively parallel DNA sequencing. Nat. Biotechnol. 2013, 31, 1023-1031. [CrossRef] [PubMed].
-
(2013)
Nat. Biotechnol
, vol.31
, pp. 1023-1031
-
-
Frampton, G.M.1
Fichtenholtz, A.2
Otto, G.A.3
Wang, K.4
Downing, S.R.5
He, J.6
Schnall-Levin, M.7
White, J.8
Sanford, E.M.9
An, P.10
-
19
-
-
84890421610
-
Validation of a next-generation sequencing assay for clinical molecular oncology
-
[CrossRef] [PubMed]
-
Cottrell, C. E.; Al-Kateb, H.; Bredemeyer, A. J.; Duncavage, E. J.; Spencer, D. H.; Abel, H. J.; Lockwood, C. M.; Hagemann, I. S.; O'Guin, S. M.; Burcea, L. C.; et al. Validation of a next-generation sequencing assay for clinical molecular oncology. J. Mol. Diagn. 2014, 16, 89-105. [CrossRef] [PubMed].
-
(2014)
J. Mol. Diagn
, vol.16
, pp. 89-105
-
-
Cottrell, C.E.1
Al-Kateb, H.2
Bredemeyer, A.J.3
Duncavage, E.J.4
Spencer, D.H.5
Abel, H.J.6
Lockwood, C.M.7
Hagemann, I.S.8
O'Guin, S.M.9
Burcea, L.C.10
-
20
-
-
84890409823
-
Validation and implementation of targeted capture and sequencing for the detection of actionable mutation, copy number variation, and gene rearrangement in clinical cancer specimens
-
[CrossRef] [PubMed]
-
Pritchard, C. C.; Salipante, S. J.; Koehler, K.; Smith, C.; Scroggins, S.; Wood, B.; Wu, D.; Lee, M. K.; Dintzis, S.; Adey, A.; et al. Validation and implementation of targeted capture and sequencing for the detection of actionable mutation, copy number variation, and gene rearrangement in clinical cancer specimens. J. Mol. Diagn. 2014, 16, 56-67. [CrossRef] [PubMed].
-
(2014)
J. Mol. Diagn
, vol.16
, pp. 56-67
-
-
Pritchard, C.C.1
Salipante, S.J.2
Koehler, K.3
Smith, C.4
Scroggins, S.5
Wood, B.6
Wu, D.7
Lee, M.K.8
Dintzis, S.9
Adey, A.10
-
22
-
-
77449121614
-
Target-enrichment strategies for next-generation sequencing
-
[CrossRef] [PubMed]
-
Mamanova, L.; Coffey, A. J.; Scott, C. E.; Kozarewa, I.; Turner, E. H.; Kumar, A.; Howard, E.; Shendure, J.; Turner, D. J. Target-enrichment strategies for next-generation sequencing. Nat. Methods 2010, 7, 111-118. [CrossRef] [PubMed].
-
(2010)
Nat. Methods
, vol.7
, pp. 111-118
-
-
Mamanova, L.1
Coffey, A.J.2
Scott, C.E.3
Kozarewa, I.4
Turner, E.H.5
Kumar, A.6
Howard, E.7
Shendure, J.8
Turner, D.J.9
-
23
-
-
84942521554
-
Broad, hybrid capture-based next-generation sequencing identifies actionable genomic alterations in lung adenocarcinomas otherwise negative for such alterations by other genomic testing approaches
-
[CrossRef] [PubMed]
-
Drilon, A.; Wang, L.; Arcila, M. E.; Balasubramanian, S.; Greenbowe, J. R.; Ross, J. S.; Stephens, P.; Lipson, D.; Miller, V. A.; Kris, M. G.; et al. Broad, hybrid capture-based next-generation sequencing identifies actionable genomic alterations in lung adenocarcinomas otherwise negative for such alterations by other genomic testing approaches. Clin. Cancer Res. 2015. [CrossRef] [PubMed].
-
(2015)
Clin. Cancer Res
-
-
Drilon, A.1
Wang, L.2
Arcila, M.E.3
Balasubramanian, S.4
Greenbowe, J.R.5
Ross, J.S.6
Stephens, P.7
Lipson, D.8
Miller, V.A.9
Kris, M.G.10
-
24
-
-
0036626516
-
Allele-specific pcr amplification due to sequence identity between a pcr primer and an amplicon: Is direct sequencing so reliable?
-
[CrossRef] [PubMed]
-
Ikegawa, S.; Mabuchi, A.; Ogawa, M.; Ikeda, T. Allele-specific pcr amplification due to sequence identity between a pcr primer and an amplicon: Is direct sequencing so reliable? Hum. Genet. 2002, 110, 606-608. [CrossRef] [PubMed].
-
(2002)
Hum. Genet
, vol.110
, pp. 606-608
-
-
Ikegawa, S.1
Mabuchi, A.2
Ogawa, M.3
Ikeda, T.4
-
25
-
-
0032242849
-
Allele drop-out can occur in alleles differing by a single nucleotide and is not alleviated by preamplification or minor template increments
-
[CrossRef] [PubMed]
-
Hahn, S.; Garvin, A. M.; Di Naro, E.; Holzgreve, W. Allele drop-out can occur in alleles differing by a single nucleotide and is not alleviated by preamplification or minor template increments. Genet. Test 1998, 2, 351-355. [CrossRef] [PubMed].
-
(1998)
Genet. Test
, vol.2
, pp. 351-355
-
-
Hahn, S.1
Garvin, A.M.2
Di Naro, E.3
Holzgreve, W.4
-
26
-
-
0031667780
-
Pcr bias toward the wild-type k-ras and p53 sequences: Implications for pcr detection of mutations and cancer diagnosis
-
[PubMed]
-
Barnard, R.; Futo, V.; Pecheniuk, N.; Slattery, M.; Walsh, T. Pcr bias toward the wild-type k-ras and p53 sequences: Implications for pcr detection of mutations and cancer diagnosis. BioTechniques 1998, 25, 684-691. [PubMed].
-
(1998)
BioTechniques
, vol.25
, pp. 684-691
-
-
Barnard, R.1
Futo, V.2
Pecheniuk, N.3
Slattery, M.4
Walsh, T.5
-
27
-
-
84901328103
-
The validation and clinical implementation of brcaplus: A comprehensive high-risk breast cancer diagnostic assay
-
[CrossRef] [PubMed]
-
Chong, H. K.; Wang, T.; Lu, H. M.; Seidler, S.; Lu, H.; Keiles, S.; Chao, E. C.; Stuenkel, A. J.; Li, X.; Elliott, A. M. The validation and clinical implementation of brcaplus: A comprehensive high-risk breast cancer diagnostic assay. PLoS ONE 2014, 9, e97408. [CrossRef] [PubMed].
-
(2014)
PLoS ONE
, vol.9
-
-
Chong, H.K.1
Wang, T.2
Lu, H.M.3
Seidler, S.4
Lu, H.5
Keiles, S.6
Chao, E.C.7
Stuenkel, A.J.8
Li, X.9
Elliott, A.M.10
-
28
-
-
63949083912
-
Amplification-free illumina sequencing-library preparation facilitates improved mapping and assembly of (g+c)-biased genomes
-
[CrossRef] [PubMed]
-
Kozarewa, I.; Ning, Z.; Quail, M. A.; Sanders, M. J.; Berriman, M.; Turner, D. J. Amplification-free illumina sequencing-library preparation facilitates improved mapping and assembly of (g+c)-biased genomes. Nat. Methods 2009, 6, 291-295. [CrossRef] [PubMed].
-
(2009)
Nat. Methods
, vol.6
, pp. 291-295
-
-
Kozarewa, I.1
Ning, Z.2
Quail, M.A.3
Sanders, M.J.4
Berriman, M.5
Turner, D.J.6
-
29
-
-
68549104404
-
The sequence alignment/map format and samtools
-
[CrossRef] [PubMed]
-
Li, H.; Handsaker, B.; Wysoker, A.; Fennell, T.; Ruan, J.; Homer, N.; Marth, G.; Abecasis, G.; Durbin, R. The sequence alignment/map format and samtools. Bioinformatics 2009, 25, 2078-2079. [CrossRef] [PubMed].
-
(2009)
Bioinformatics
, vol.25
, pp. 2078-2079
-
-
Li, H.1
Handsaker, B.2
Wysoker, A.3
Fennell, T.4
Ruan, J.5
Homer, N.6
Marth, G.7
Abecasis, G.8
Durbin, R.9
-
30
-
-
79960410567
-
Seal: A distributed short read mapping and duplicate removal tool
-
[CrossRef] [PubMed]
-
Pireddu, L.; Leo, S.; Zanetti, G. Seal: A distributed short read mapping and duplicate removal tool. Bioinformatics 2011, 27, 2159-2160. [CrossRef] [PubMed].
-
(2011)
Bioinformatics
, vol.27
, pp. 2159-2160
-
-
Pireddu, L.1
Leo, S.2
Zanetti, G.3
-
31
-
-
84937432096
-
-
(accessed on 15 May 2015)
-
Picard. Available online: http://broadinstitute. github. io/picard/(accessed on 15 May 2015).
-
Picard
-
-
-
32
-
-
84994850922
-
Biased estimates of clonal evolution and subclonal heterogeneity can arise from pcr duplicates in deep sequencing experiments
-
[CrossRef] [PubMed]
-
Smith, E. N.; Jepsen, K.; Khosroheidari, M.; Rassenti, L. Z.; D'Antonio, M.; Ghia, E. M.; Carson, D. A.; Jamieson, C. H.; Kipps, T. J.; Frazer, K. A. Biased estimates of clonal evolution and subclonal heterogeneity can arise from pcr duplicates in deep sequencing experiments. Genome Biol. 2014, 15. [CrossRef] [PubMed].
-
(2014)
Genome Biol
-
-
Smith, E.N.1
Jepsen, K.2
Khosroheidari, M.3
Rassenti, L.Z.4
D'Antonio, M.5
Ghia, E.M.6
Carson, D.A.7
Jamieson, C.H.8
Kipps, T.J.9
Frazer, K.A.10
-
33
-
-
0344629203
-
Bias and artifacts in multitemplate polymerase chain reactions (pcr)
-
[CrossRef]
-
Kanagawa, T. Bias and artifacts in multitemplate polymerase chain reactions (pcr). J. Biosci. Bioeng. 2003, 96, 317-323. [CrossRef].
-
(2003)
J. Biosci. Bioeng
, vol.96
, pp. 317-323
-
-
Kanagawa, T.1
-
34
-
-
33344469813
-
Conversions of formaldehyde-modified 2'-deoxyadenosine 5'-monophosphate in conditions modeling formalin-fixed tissue dehydration
-
[CrossRef] [PubMed]
-
Rait, V. K.; Zhang, Q.; Fabris, D.; Mason, J. T.; O'Leary, T. J. Conversions of formaldehyde-modified 2'-deoxyadenosine 5'-monophosphate in conditions modeling formalin-fixed tissue dehydration. J. Histochem. Cytochem. 2006, 54, 301-310. [CrossRef] [PubMed].
-
(2006)
J. Histochem. Cytochem
, vol.54
, pp. 301-310
-
-
Rait, V.K.1
Zhang, Q.2
Fabris, D.3
Mason, J.T.4
O'Leary, T.J.5
-
35
-
-
19444379602
-
Molecular barcodes detect redundancy and contamination in hairpin-bisulfite pcr
-
[CrossRef] [PubMed]
-
Miner, B. E.; Stoger, R. J.; Burden, A. F.; Laird, C. D.; Hansen, R. S. Molecular barcodes detect redundancy and contamination in hairpin-bisulfite pcr. Nucleic Acids Res. 2004, 32, e135. [CrossRef] [PubMed].
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Miner, B.E.1
Stoger, R.J.2
Burden, A.F.3
Laird, C.D.4
Hansen, R.S.5
-
36
-
-
79960226263
-
A method for counting pcr template molecules with application to next-generation sequencing
-
[CrossRef] [PubMed]
-
Casbon, J. A.; Osborne, R. J.; Brenner, S.; Lichtenstein, C. P. A method for counting pcr template molecules with application to next-generation sequencing. Nucleic Acids Res. 2011, 39, e81. [CrossRef] [PubMed].
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Casbon, J.A.1
Osborne, R.J.2
Brenner, S.3
Lichtenstein, C.P.4
-
37
-
-
84877108149
-
Single molecule molecular inversion probes for targeted, high-accuracy detection of low-frequency variation
-
[CrossRef] [PubMed]
-
Hiatt, J. B.; Pritchard, C. C.; Salipante, S. J.; O'Roak, B. J.; Shendure, J. Single molecule molecular inversion probes for targeted, high-accuracy detection of low-frequency variation. Genome Res. 2013, 23, 843-854. [CrossRef] [PubMed].
-
(2013)
Genome Res
, vol.23
, pp. 843-854
-
-
Hiatt, J.B.1
Pritchard, C.C.2
Salipante, S.J.3
O'Roak, B.J.4
Shendure, J.5
-
38
-
-
84895069488
-
Quantitative single-cell RNA-seq with unique molecular identifiers
-
[CrossRef] [PubMed]
-
Islam, S.; Zeisel, A.; Joost, S.; La Manno, G.; Zajac, P.; Kasper, M.; Lonnerberg, P.; Linnarsson, S. Quantitative single-cell RNA-seq with unique molecular identifiers. Nat. Methods 2014, 11, 163-166. [CrossRef] [PubMed].
-
(2014)
Nat. Methods
, vol.11
, pp. 163-166
-
-
Islam, S.1
Zeisel, A.2
Joost, S.3
La Manno, G.4
Zajac, P.5
Kasper, M.6
Lonnerberg, P.7
Linnarsson, S.8
-
39
-
-
36549021060
-
Genome-wide in situ exon capture for selective resequencing
-
[CrossRef] [PubMed]
-
Hodges, E.; Xuan, Z.; Balija, V.; Kramer, M.; Molla, M. N.; Smith, S. W.; Middle, C. M.; Rodesch, M. J.; Albert, T. J.; Hannon, G. J.; et al. Genome-wide in situ exon capture for selective resequencing. Nat. Genet. 2007, 39, 1522-1527. [CrossRef] [PubMed].
-
(2007)
Nat. Genet
, vol.39
, pp. 1522-1527
-
-
Hodges, E.1
Xuan, Z.2
Balija, V.3
Kramer, M.4
Molla, M.N.5
Smith, S.W.6
Middle, C.M.7
Rodesch, M.J.8
Albert, T.J.9
Hannon, G.J.10
-
40
-
-
35748959649
-
Microarray-based genomic selection for high-throughput resequencing
-
[CrossRef] [PubMed]
-
Okou, D. T.; Steinberg, K. M.; Middle, C.; Cutler, D. J.; Albert, T. J.; Zwick, M. E. Microarray-based genomic selection for high-throughput resequencing. Nat. Methods 2007, 4, 907-909. [CrossRef] [PubMed].
-
(2007)
Nat. Methods
, vol.4
, pp. 907-909
-
-
Okou, D.T.1
Steinberg, K.M.2
Middle, C.3
Cutler, D.J.4
Albert, T.J.5
Zwick, M.E.6
-
41
-
-
35748951614
-
Direct selection of human genomic loci by microarray hybridization
-
[CrossRef] [PubMed]
-
Albert, T. J.; Molla, M. N.; Muzny, D. M.; Nazareth, L.; Wheeler, D.; Song, X.; Richmond, T. A.; Middle, C. M.; Rodesch, M. J.; Packard, C. J.; et al. Direct selection of human genomic loci by microarray hybridization. Nat. Methods 2007, 4, 903-905. [CrossRef] [PubMed].
-
(2007)
Nat. Methods
, vol.4
, pp. 903-905
-
-
Albert, T.J.1
Molla, M.N.2
Muzny, D.M.3
Nazareth, L.4
Wheeler, D.5
Song, X.6
Richmond, T.A.7
Middle, C.M.8
Rodesch, M.J.9
Packard, C.J.10
-
42
-
-
84890244872
-
Computational methods for detecting copy number variations in cancer genome using next generation sequencing: Principles and challenges
-
[PubMed]
-
Liu, B.; Morrison, C. D.; Johnson, C. S.; Trump, D. L.; Qin, M.; Conroy, J. C.; Wang, J.; Liu, S. Computational methods for detecting copy number variations in cancer genome using next generation sequencing: Principles and challenges. Oncotarget 2013, 4, 1868-1881. [PubMed].
-
(2013)
Oncotarget
, vol.4
, pp. 1868-1881
-
-
Liu, B.1
Morrison, C.D.2
Johnson, C.S.3
Trump, D.L.4
Qin, M.5
Conroy, J.C.6
Wang, J.7
Liu, S.8
-
43
-
-
84886811866
-
Computational tools for copy number variation (cnv) detection using next-generation sequencing data: Features and perspectives
-
[CrossRef] [PubMed]
-
Zhao, M.; Wang, Q.; Wang, Q.; Jia, P.; Zhao, Z. Computational tools for copy number variation (cnv) detection using next-generation sequencing data: Features and perspectives. BMC Bioinformatics 2013, 14, S1. [CrossRef] [PubMed].
-
(2013)
BMC Bioinformatics
, vol.14
-
-
Zhao, M.1
Wang, Q.2
Wang, Q.3
Jia, P.4
Zhao, Z.5
-
44
-
-
84899932270
-
Development and validation of a next-generation sequencing-based protocol for 24-chromosome aneuploidy screening of embryos
-
[CrossRef] [PubMed]
-
Fiorentino, F.; Biricik, A.; Bono, S.; Spizzichino, L.; Cotroneo, E.; Cottone, G.; Kokocinski, F.; Michel, C. E. Development and validation of a next-generation sequencing-based protocol for 24-chromosome aneuploidy screening of embryos. Fertil. Steril. 2014, 101, 1375-1382. [CrossRef] [PubMed].
-
(2014)
Fertil. Steril
, vol.101
, pp. 1375-1382
-
-
Fiorentino, F.1
Biricik, A.2
Bono, S.3
Spizzichino, L.4
Cotroneo, E.5
Cottone, G.6
Kokocinski, F.7
Michel, C.E.8
-
45
-
-
84928973006
-
Application of next-generation sequencing technology for comprehensive aneuploidy screening of blastocysts in clinical preimplantation genetic screening cycles
-
[CrossRef] [PubMed]
-
Fiorentino, F.; Bono, S.; Biricik, A.; Nuccitelli, A.; Cotroneo, E.; Cottone, G.; Kokocinski, F.; Michel, C. E.; Minasi, M. G.; Greco, E. Application of next-generation sequencing technology for comprehensive aneuploidy screening of blastocysts in clinical preimplantation genetic screening cycles. Hum. Reprod. 2014, 29, 2802-2813. [CrossRef] [PubMed].
-
(2014)
Hum. Reprod
, vol.29
, pp. 2802-2813
-
-
Fiorentino, F.1
Bono, S.2
Biricik, A.3
Nuccitelli, A.4
Cotroneo, E.5
Cottone, G.6
Kokocinski, F.7
Michel, C.E.8
Minasi, M.G.9
Greco, E.10
-
46
-
-
17344371740
-
High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays
-
[CrossRef] [PubMed]
-
Pinkel, D.; Segraves, R.; Sudar, D.; Clark, S.; Poole, I.; Kowbel, D.; Collins, C.; Kuo, W. L.; Chen, C.; Zhai, Y.; et al. High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays. Nat. Genet. 1998, 20, 207-211. [CrossRef] [PubMed].
-
(1998)
Nat. Genet
, vol.20
, pp. 207-211
-
-
Pinkel, D.1
Segraves, R.2
Sudar, D.3
Clark, S.4
Poole, I.5
Kowbel, D.6
Collins, C.7
Kuo, W.L.8
Chen, C.9
Zhai, Y.10
-
47
-
-
0032823523
-
Genome-wide analysis of DNA copy-number changes using cdna microarrays
-
[CrossRef] [PubMed]
-
Pollack, J. R.; Perou, C. M.; Alizadeh, A. A.; Eisen, M. B.; Pergamenschikov, A.; Williams, C. F.; Jeffrey, S. S.; Botstein, D.; Brown, P. O. Genome-wide analysis of DNA copy-number changes using cdna microarrays. Nat. Genet. 1999, 23, 41-46. [CrossRef] [PubMed].
-
(1999)
Nat. Genet
, vol.23
, pp. 41-46
-
-
Pollack, J.R.1
Perou, C.M.2
Alizadeh, A.A.3
Eisen, M.B.4
Pergamenschikov, A.5
Williams, C.F.6
Jeffrey, S.S.7
Botstein, D.8
Brown, P.O.9
-
48
-
-
0029828526
-
Correlation of DNA ploidy and histologic diagnosis from prostate core-needle biopsies: Is DNA ploidy more sensitive than histology for the diagnosis of carcinoma in small specimens?
-
[CrossRef]
-
Lo, J.; Kerns, B. J.; Amling, C. L.; Robertson, C. N.; Layfield, L. J. Correlation of DNA ploidy and histologic diagnosis from prostate core-needle biopsies: Is DNA ploidy more sensitive than histology for the diagnosis of carcinoma in small specimens? J. Surg. Oncol. 1996, 63, 41-45. [CrossRef].
-
(1996)
J. Surg. Oncol
, vol.63
, pp. 41-45
-
-
Lo, J.1
Kerns, B.J.2
Amling, C.L.3
Robertson, C.N.4
Layfield, L.J.5
-
49
-
-
0006636076
-
Aneuploidy and rapid cell proliferation in recurrent prostate cancers with androgen receptor gene amplification
-
[CrossRef] [PubMed]
-
Koivisto, P. Aneuploidy and rapid cell proliferation in recurrent prostate cancers with androgen receptor gene amplification. Prostate Cancer Prostat. Dis. 1997, 1, 21-25. [CrossRef] [PubMed].
-
(1997)
Prostate Cancer Prostat. Dis
, vol.1
, pp. 21-25
-
-
Koivisto, P.1
-
50
-
-
62849109983
-
Breast cancer and aneusomy 17: Implications for carcinogenesis and therapeutic response
-
[CrossRef]
-
Reinholz, M. M.; Bruzek, A. K.; Visscher, D. W.; Lingle, W. L.; Schroeder, M. J.; Perez, E. A.; Jenkins, R. B. Breast cancer and aneusomy 17: Implications for carcinogenesis and therapeutic response. Lancet 2009, 10, 267-277. [CrossRef].
-
(2009)
Lancet
, vol.10
, pp. 267-277
-
-
Reinholz, M.M.1
Bruzek, A.K.2
Visscher, D.W.3
Lingle, W.L.4
Schroeder, M.J.5
Perez, E.A.6
Jenkins, R.B.7
-
51
-
-
68249110633
-
Poor prognostic significance of unamplified chromosome 17 polysomy in invasive breast carcinoma
-
[CrossRef] [PubMed]
-
Krishnamurti, U.; Hammers, J. L.; Atem, F. D.; Storto, P. D.; Silverman, J. F. Poor prognostic significance of unamplified chromosome 17 polysomy in invasive breast carcinoma. Mod. Pathol. 2009, 22, 1044-1048. [CrossRef] [PubMed].
-
(2009)
Mod. Pathol
, vol.22
, pp. 1044-1048
-
-
Krishnamurti, U.1
Hammers, J.L.2
Atem, F.D.3
Storto, P.D.4
Silverman, J.F.5
-
52
-
-
0037272682
-
Chromosome 17 aneusomy is associated with poor prognostic factors in invasive breast carcinoma
-
[CrossRef] [PubMed]
-
Watters, A. D.; Going, J. J.; Cooke, T. G.; Bartlett, J. M. Chromosome 17 aneusomy is associated with poor prognostic factors in invasive breast carcinoma. Breast Cancer Res. Treat. 2003, 77, 109-114. [CrossRef] [PubMed].
-
(2003)
Breast Cancer Res. Treat
, vol.77
, pp. 109-114
-
-
Watters, A.D.1
Going, J.J.2
Cooke, T.G.3
Bartlett, J.M.4
-
53
-
-
65549158870
-
The rewards and challenges of array-based karyotyping for clinical oncology applications
-
[CrossRef] [PubMed]
-
Hagenkord, J. M.; Chang, C. C. The rewards and challenges of array-based karyotyping for clinical oncology applications. Leukemia 2009, 23, 829-833. [CrossRef] [PubMed].
-
(2009)
Leukemia
, vol.23
, pp. 829-833
-
-
Hagenkord, J.M.1
Chang, C.C.2
-
54
-
-
52249091511
-
Whole-genome scanning by array comparative genomic hybridization as a clinical tool for risk assessment in chronic lymphocytic leukemia
-
[CrossRef] [PubMed]
-
Gunn, S. R.; Mohammed, M. S.; Gorre, M. E.; Cotter, P. D.; Kim, J.; Bahler, D. W.; Preobrazhensky, S. N.; Higgins, R. A.; Bolla, A. R.; Ismail, S. H.; et al. Whole-genome scanning by array comparative genomic hybridization as a clinical tool for risk assessment in chronic lymphocytic leukemia. J. Mol. Diagn. 2008, 10, 442-451. [CrossRef] [PubMed].
-
(2008)
J. Mol. Diagn
, vol.10
, pp. 442-451
-
-
Gunn, S.R.1
Mohammed, M.S.2
Gorre, M.E.3
Cotter, P.D.4
Kim, J.5
Bahler, D.W.6
Preobrazhensky, S.N.7
Higgins, R.A.8
Bolla, A.R.9
Ismail, S.H.10
-
55
-
-
41749121507
-
Optimization of the affymetrix genechip mapping 10k 2. 0 assay for routine clinical use on formalin-fixed paraffin-embedded tissues
-
[CrossRef] [PubMed]
-
Lyons-Weiler, M.; Hagenkord, J.; Sciulli, C.; Dhir, R.; Monzon, F. A. Optimization of the affymetrix genechip mapping 10k 2. 0 assay for routine clinical use on formalin-fixed paraffin-embedded tissues. Diagn. Mol. Pathol. 2008, 17, 3-13. [CrossRef] [PubMed].
-
(2008)
Diagn. Mol. Pathol
, vol.17
, pp. 3-13
-
-
Lyons-Weiler, M.1
Hagenkord, J.2
Sciulli, C.3
Dhir, R.4
Monzon, F.A.5
-
56
-
-
84884997982
-
Emerging landscape of oncogenic signatures across human cancers
-
[CrossRef] [PubMed]
-
Ciriello, G.; Miller, M. L.; Aksoy, B. A.; Senbabaoglu, Y.; Schultz, N.; Sander, C. Emerging landscape of oncogenic signatures across human cancers. Nat. Genet. 2013, 45, 1127-1133. [CrossRef] [PubMed].
-
(2013)
Nat. Genet
, vol.45
, pp. 1127-1133
-
-
Ciriello, G.1
Miller, M.L.2
Aksoy, B.A.3
Senbabaoglu, Y.4
Schultz, N.5
Sander, C.6
-
57
-
-
41449105551
-
Her2 status and benefit from adjuvant trastuzumab in breast cancer
-
[CrossRef] [PubMed]
-
Paik, S.; Kim, C.; Wolmark, N. Her2 status and benefit from adjuvant trastuzumab in breast cancer. N. Engl. J. Med. 2008, 358, 1409-1411. [CrossRef] [PubMed].
-
(2008)
N. Engl. J. Med
, vol.358
, pp. 1409-1411
-
-
Paik, S.1
Kim, C.2
Wolmark, N.3
-
58
-
-
84890254448
-
Recommendations for human epidermal growth factor receptor 2 testing in breast cancer: American society of clinical oncology/college of american pathologists clinical practice guideline update
-
[CrossRef] [PubMed]
-
Wolff, A. C.; Hammond, M. E.; Hicks, D. G.; Dowsett, M.; McShane, L. M.; Allison, K. H.; Allred, D. C.; Bartlett, J. M.; Bilous, M.; Fitzgibbons, P.; et al. Recommendations for human epidermal growth factor receptor 2 testing in breast cancer: American society of clinical oncology/college of american pathologists clinical practice guideline update. J. Clin. Oncol. 2013, 31, 3997-4013. [CrossRef] [PubMed].
-
(2013)
J. Clin. Oncol
, vol.31
, pp. 3997-4013
-
-
Wolff, A.C.1
Hammond, M.E.2
Hicks, D.G.3
Dowsett, M.4
McShane, L.M.5
Allison, K.H.6
Allred, D.C.7
Bartlett, J.M.8
Bilous, M.9
Fitzgibbons, P.10
-
59
-
-
34247363714
-
Standardization of her2 testing: Results of an international proficiency-testing ring study
-
[CrossRef] [PubMed]
-
Dowsett, M.; Hanna, W. M.; Kockx, M.; Penault-Llorca, F.; Ruschoff, J.; Gutjahr, T.; Habben, K.; van de Vijver, M. J. Standardization of her2 testing: Results of an international proficiency-testing ring study. Mod. Pathol. 2007, 20, 584-591. [CrossRef] [PubMed].
-
(2007)
Mod. Pathol
, vol.20
, pp. 584-591
-
-
Dowsett, M.1
Hanna, W.M.2
Kockx, M.3
Penault-Llorca, F.4
Ruschoff, J.5
Gutjahr, T.6
Habben, K.7
van de Vijver, M.J.8
-
60
-
-
77955496491
-
Clinical array-based karyotyping of breast cancer with equivocal her2 status resolves gene copy number and reveals chromosome 17 complexity
-
[CrossRef] [PubMed]
-
Gunn, S.; Yeh, I. T.; Lytvak, I.; Tirtorahardjo, B.; Dzidic, N.; Zadeh, S.; Kim, J.; McCaskill, C.; Lim, L.; Gorre, M.; et al. Clinical array-based karyotyping of breast cancer with equivocal her2 status resolves gene copy number and reveals chromosome 17 complexity. BMC Cancer 2010, 10. [CrossRef] [PubMed].
-
(2010)
BMC Cancer
-
-
Gunn, S.1
Yeh, I.T.2
Lytvak, I.3
Tirtorahardjo, B.4
Dzidic, N.5
Zadeh, S.6
Kim, J.7
McCaskill, C.8
Lim, L.9
Gorre, M.10
-
61
-
-
84891058756
-
Current challenges for her2 testing in diagnostic pathology: State of the art and controversial issues
-
[CrossRef] [PubMed]
-
Sapino, A.; Goia, M.; Recupero, D.; Marchio, C. Current challenges for her2 testing in diagnostic pathology: State of the art and controversial issues. Front. Oncol. 2013, 3, 129. [CrossRef] [PubMed].
-
(2013)
Front. Oncol
, vol.3
-
-
Sapino, A.1
Goia, M.2
Recupero, D.3
Marchio, C.4
-
62
-
-
84924038823
-
High-density snp arrays improve detection of her2 amplification and polyploidy in breast tumors
-
[CrossRef] [PubMed]
-
Hansen, T. V.; Vikesaa, J.; Buhl, S. S.; Rossing, H. H.; Timmermans-Wielenga, V.; Nielsen, F. C. High-density snp arrays improve detection of her2 amplification and polyploidy in breast tumors. BMC Cancer 2015, 15. [CrossRef] [PubMed].
-
(2015)
BMC Cancer
-
-
Hansen, T.V.1
Vikesaa, J.2
Buhl, S.S.3
Rossing, H.H.4
Timmermans-Wielenga, V.5
Nielsen, F.C.6
-
63
-
-
77649144588
-
The vanguard has arrived in the clinical laboratory: Array-based karyotyping for prognostic markers in chronic lymphocytic leukemia
-
[CrossRef] [PubMed]
-
Gunn, S. R. The vanguard has arrived in the clinical laboratory: Array-based karyotyping for prognostic markers in chronic lymphocytic leukemia. J. Mol. Diagn. 2010, 12, 144-146. [CrossRef] [PubMed].
-
(2010)
J. Mol. Diagn
, vol.12
, pp. 144-146
-
-
Gunn, S.R.1
-
64
-
-
63449110271
-
High quality copy number and genotype data from ffpe samples using molecular inversion probe (mip) microarrays
-
[CrossRef] [PubMed]
-
Wang, Y.; Carlton, V. E.; Karlin-Neumann, G.; Sapolsky, R.; Zhang, L.; Moorhead, M.; Wang, Z. C.; Richardson, A. L.; Warren, R.; Walther, A.; et al. High quality copy number and genotype data from ffpe samples using molecular inversion probe (mip) microarrays. BMC Med. Genom. 2009, 2. [CrossRef] [PubMed].
-
(2009)
BMC Med. Genom
-
-
Wang, Y.1
Carlton, V.E.2
Karlin-Neumann, G.3
Sapolsky, R.4
Zhang, L.5
Moorhead, M.6
Wang, Z.C.7
Richardson, A.L.8
Warren, R.9
Walther, A.10
-
65
-
-
84885368416
-
Detecting somatic point mutations in cancer genome sequencing data: A comparison of mutation callers
-
[CrossRef] [PubMed]
-
Wang, Q.; Jia, P.; Li, F.; Chen, H.; Ji, H.; Hucks, D.; Dahlman, K. B.; Pao, W.; Zhao, Z. Detecting somatic point mutations in cancer genome sequencing data: A comparison of mutation callers. Genome Med. 2013, 5. [CrossRef] [PubMed].
-
(2013)
Genome Med
-
-
Wang, Q.1
Jia, P.2
Li, F.3
Chen, H.4
Ji, H.5
Hucks, D.6
Dahlman, K.B.7
Pao, W.8
Zhao, Z.9
-
66
-
-
84884521244
-
Accurately identifying low-allelic fraction variants in single samples with next-generation sequencing: Applications in tumor subclone resolution
-
[CrossRef] [PubMed]
-
Stead, L. F.; Sutton, K. M.; Taylor, G. R.; Quirke, P.; Rabbitts, P. Accurately identifying low-allelic fraction variants in single samples with next-generation sequencing: Applications in tumor subclone resolution. Hum. Mutat. 2013, 34, 1432-1438. [CrossRef] [PubMed].
-
(2013)
Hum. Mutat
, vol.34
, pp. 1432-1438
-
-
Stead, L.F.1
Sutton, K.M.2
Taylor, G.R.3
Quirke, P.4
Rabbitts, P.5
-
67
-
-
84863229597
-
Varscan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing
-
[CrossRef] [PubMed]
-
Koboldt, D. C.; Zhang, Q.; Larson, D. E.; Shen, D.; McLellan, M. D.; Lin, L.; Miller, C. A.; Mardis, E. R.; Ding, L.; Wilson, R. K. Varscan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing. Genome Res. 2012, 22, 568-576. [CrossRef] [PubMed].
-
(2012)
Genome Res
, vol.22
, pp. 568-576
-
-
Koboldt, D.C.1
Zhang, Q.2
Larson, D.E.3
Shen, D.4
McLellan, M.D.5
Lin, L.6
Miller, C.A.7
Mardis, E.R.8
Ding, L.9
Wilson, R.K.10
-
68
-
-
84874025843
-
Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples
-
[CrossRef] [PubMed]
-
Cibulskis, K.; Lawrence, M. S.; Carter, S. L.; Sivachenko, A.; Jaffe, D.; Sougnez, C.; Gabriel, S.; Meyerson, M.; Lander, E. S.; Getz, G. Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples. Nat. Biotechnol. 2013, 31, 213-219. [CrossRef] [PubMed].
-
(2013)
Nat. Biotechnol
, vol.31
, pp. 213-219
-
-
Cibulskis, K.1
Lawrence, M.S.2
Carter, S.L.3
Sivachenko, A.4
Jaffe, D.5
Sougnez, C.6
Gabriel, S.7
Meyerson, M.8
Lander, E.S.9
Getz, G.10
-
70
-
-
84928248330
-
Personalized genomic analyses for cancer mutation discovery and interpretation
-
[CrossRef] [PubMed]
-
Jones, S.; Anagnostou, V.; Lytle, K.; Parpart-Li, S.; Nesselbush, M.; Riley, D. R.; Shukla, M.; Chesnick, B.; Kadan, M.; Papp, E.; et al. Personalized genomic analyses for cancer mutation discovery and interpretation. Sci. Transl. Med. 2015, 7, 283ra53. [CrossRef] [PubMed].
-
(2015)
Sci. Transl. Med
, vol.7
, pp. 283ra53
-
-
Jones, S.1
Anagnostou, V.2
Lytle, K.3
Parpart-Li, S.4
Nesselbush, M.5
Riley, D.R.6
Shukla, M.7
Chesnick, B.8
Kadan, M.9
Papp, E.10
-
71
-
-
41149124135
-
Mechanisms of inherited cancer susceptibility
-
[CrossRef] [PubMed]
-
Hodgson, S. Mechanisms of inherited cancer susceptibility. J. Zhejiang Uni. Sci. B 2008, 9, 1-4. [CrossRef] [PubMed].
-
(2008)
J. Zhejiang Uni. Sci. B
, vol.9
, pp. 1-4
-
-
Hodgson, S.1
-
72
-
-
84905815773
-
Clinical tumor sequencing: An incidental casualty of the american college of medical genetics and genomics recommendations for reporting of incidental findings
-
[CrossRef] [PubMed]
-
Parsons, D. W.; Roy, A.; Plon, S. E.; Roychowdhury, S.; Chinnaiyan, A. M. Clinical tumor sequencing: An incidental casualty of the american college of medical genetics and genomics recommendations for reporting of incidental findings. J. Clin. Oncol. 2014, 32, 2203-2205. [CrossRef] [PubMed].
-
(2014)
J. Clin. Oncol
, vol.32
, pp. 2203-2205
-
-
Parsons, D.W.1
Roy, A.2
Plon, S.E.3
Roychowdhury, S.4
Chinnaiyan, A.M.5
-
73
-
-
33751114970
-
Characterization of the breast cancer associated atm 7271T>G (V2424G) mutation by gene expression profiling
-
[CrossRef] [PubMed]
-
Waddell, N.; Jonnalagadda, J.; Marsh, A.; Grist, S.; Jenkins, M.; Hobson, K.; Taylor, M.; Lindeman, G. J.; Tavtigian, S. V.; Suthers, G.; et al. Characterization of the breast cancer associated atm 7271T>G (V2424G) mutation by gene expression profiling. Genes Chromosom. Cancer 2006, 45, 1169-1181. [CrossRef] [PubMed].
-
(2006)
Genes Chromosom. Cancer
, vol.45
, pp. 1169-1181
-
-
Waddell, N.1
Jonnalagadda, J.2
Marsh, A.3
Grist, S.4
Jenkins, M.5
Hobson, K.6
Taylor, M.7
Lindeman, G.J.8
Tavtigian, S.V.9
Suthers, G.10
-
74
-
-
17344362697
-
Atm mutations and phenotypes in ataxia-telangiectasia families in the british isles: Expression of mutant atm and the risk of leukemia, lymphoma, and breast cancer
-
[CrossRef] [PubMed]
-
Stankovic, T.; Kidd, A. M.; Sutcliffe, A.; McGuire, G. M.; Robinson, P.; Weber, P.; Bedenham, T.; Bradwell, A. R.; Easton, D. F.; Lennox, G. G.; et al. Atm mutations and phenotypes in ataxia-telangiectasia families in the british isles: Expression of mutant atm and the risk of leukemia, lymphoma, and breast cancer. Am. J. Hum. Genet. 1998, 62, 334-345. [CrossRef] [PubMed].
-
(1998)
Am. J. Hum. Genet
, vol.62
, pp. 334-345
-
-
Stankovic, T.1
Kidd, A.M.2
Sutcliffe, A.3
McGuire, G.M.4
Robinson, P.5
Weber, P.6
Bedenham, T.7
Bradwell, A.R.8
Easton, D.F.9
Lennox, G.G.10
-
75
-
-
33750904243
-
Population-based estimates of breast cancer risks associated with atm gene variants c. 7271t>g and c. 1066-6t>g (ivs10-6t>g) from the breast cancer family registry
-
[CrossRef] [PubMed]
-
Bernstein, J. L.; Teraoka, S.; Southey, M. C.; Jenkins, M. A.; Andrulis, I. L.; Knight, J. A.; John, E. M.; Lapinski, R.; Wolitzer, A. L.; Whittemore, A. S.; et al. Population-based estimates of breast cancer risks associated with atm gene variants c. 7271t>g and c. 1066-6t>g (ivs10-6t>g) from the breast cancer family registry. Hum. Mutat. 2006, 27, 1122-1128. [CrossRef] [PubMed].
-
(2006)
Hum. Mutat
, vol.27
, pp. 1122-1128
-
-
Bernstein, J.L.1
Teraoka, S.2
Southey, M.C.3
Jenkins, M.A.4
Andrulis, I.L.5
Knight, J.A.6
John, E.M.7
Lapinski, R.8
Wolitzer, A.L.9
Whittemore, A.S.10
-
76
-
-
80053100604
-
Rare variants in the atm gene and risk of breast cancer
-
[CrossRef] [PubMed]
-
Goldgar, D. E.; Healey, S.; Dowty, J. G.; Da Silva, L.; Chen, X.; Spurdle, A. B.; Terry, M. B.; Daly, M. J.; Buys, S. M.; Southey, M. C.; et al. Rare variants in the atm gene and risk of breast cancer. Breast Cancer Res. 2011, 13, R73. [CrossRef] [PubMed].
-
(2011)
Breast Cancer Res
, vol.13
-
-
Goldgar, D.E.1
Healey, S.2
Dowty, J.G.3
Da Silva, L.4
Chen, X.5
Spurdle, A.B.6
Terry, M.B.7
Daly, M.J.8
Buys, S.M.9
Southey, M.C.10
-
77
-
-
0035449355
-
Cell cycle checkpoint signaling through the atm and atr kinases
-
[CrossRef] [PubMed]
-
Abraham, R. T. Cell cycle checkpoint signaling through the atm and atr kinases. Genes Dev. 2001, 15, 2177-2196. [CrossRef] [PubMed].
-
(2001)
Genes Dev
, vol.15
, pp. 2177-2196
-
-
Abraham, R.T.1
-
78
-
-
52449114574
-
Ataxia-telangiectasia: From a rare disorder to a paradigm for cell signalling and cancer
-
[CrossRef] [PubMed]
-
Lavin, M. F. Ataxia-telangiectasia: From a rare disorder to a paradigm for cell signalling and cancer. Nat. Rev. Mol. Cell Biol. 2008, 9, 759-769. [CrossRef] [PubMed].
-
(2008)
Nat. Rev. Mol. Cell Biol
, vol.9
, pp. 759-769
-
-
Lavin, M.F.1
-
79
-
-
33746407124
-
The ATM-dependent DNA damage signaling pathway
-
[CrossRef] [PubMed]
-
Kitagawa, R.; Kastan, M. B. The ATM-dependent DNA damage signaling pathway. Cold Spring Harb. Symp. Quant. Biol. 2005, 70, 99-109. [CrossRef] [PubMed].
-
(2005)
Cold Spring Harb. Symp. Quant. Biol
, vol.70
, pp. 99-109
-
-
Kitagawa, R.1
Kastan, M.B.2
-
80
-
-
79957575681
-
Parp-1 and parp-2: New players in tumour development
-
[PubMed]
-
Yelamos, J.; Farres, J.; Llacuna, L.; Ampurdanes, C.; Martin-Caballero, J. Parp-1 and parp-2: New players in tumour development. Am. J. Cancer Res. 2011, 1, 328-346. [PubMed].
-
(2011)
Am. J. Cancer Res
, vol.1
, pp. 328-346
-
-
Yelamos, J.1
Farres, J.2
Llacuna, L.3
Ampurdanes, C.4
Martin-Caballero, J.5
-
81
-
-
84928060317
-
Parp inhibitors: A new era of targeted therapy
-
[CrossRef] [PubMed]
-
Tangutoori, S.; Baldwin, P.; Sridhar, S. Parp inhibitors: A new era of targeted therapy. Maturitas 2015, 81, 5-9. [CrossRef] [PubMed].
-
(2015)
Maturitas
, vol.81
, pp. 5-9
-
-
Tangutoori, S.1
Baldwin, P.2
Sridhar, S.3
-
82
-
-
84867158363
-
Molecular inversion probes: A novel microarray technology and its application in cancer research
-
[CrossRef] [PubMed]
-
Wang, Y.; Cottman, M.; Schiffman, J. D. Molecular inversion probes: A novel microarray technology and its application in cancer research. Cancer Genet. 2012, 205, 34-55. [CrossRef] [PubMed].
-
(2012)
Cancer Genet
, vol.205
, pp. 34-55
-
-
Wang, Y.1
Cottman, M.2
Schiffman, J.D.3
-
83
-
-
84937492053
-
-
(accessed on 15 May 2015)
-
Piha-Paul, S. Phase II study of BMN 673. Available online: https://clinicaltrials. gov/ct2/show/NCT02286687 (accessed on 15 May 2015).
-
Phase II study of BMN 673
-
-
Piha-Paul, S.1
|