-
1
-
-
38049103907
-
HER2 status and efficacy of adjuvant anthracyclines in early breast cancer: A pooled analysis of randomized trials
-
18159072
-
HER2 status and efficacy of adjuvant anthracyclines in early breast cancer: a pooled analysis of randomized trials. A Gennari MP Sormani P Pronzato M Puntoni M Colozza U Pfeffer P Bruzzi, J Natl Cancer Inst 2008 100 14 20 18159072
-
(2008)
J Natl Cancer Inst
, vol.100
, pp. 14-20
-
-
Gennari, A.1
Sormani, M.P.2
Pronzato, P.3
Puntoni, M.4
Colozza, M.5
Pfeffer, U.6
Bruzzi, P.7
-
2
-
-
54949085398
-
K-ras mutations and benefit from cetuximab in advanced colorectal cancer
-
10.1056/NEJMoa0804385 18946061
-
K-ras mutations and benefit from cetuximab in advanced colorectal cancer. CS Karapetis S Khambata-Ford DJ Jonker CJ O'Callaghan D Tu NC Tebbutt RJ Simes H Chalchal JD Shapiro S Robitaille, N Engl J Med 2008 359 1757 65 10.1056/NEJMoa0804385 18946061
-
(2008)
N Engl J Med
, vol.359
, pp. 1757-65
-
-
Karapetis, C.S.1
Khambata-Ford, S.2
Jonker, D.J.3
O'Callaghan, C.J.4
Tu, D.5
Tebbutt, N.C.6
Simes, R.J.7
Chalchal, H.8
Shapiro, J.D.9
Robitaille, S.10
-
3
-
-
34548086778
-
The Genome Austria Tissue Bank (GATiB)
-
10.1159/000104453 17709968
-
The Genome Austria Tissue Bank (GATiB). M Asslaber PM Abuja K Stark J Eder H Gottweis M Trauner H Samonigg HJ Mischinger W Schippinger A Berghold, Pathobiology 2007 74 251 8 10.1159/000104453 17709968
-
(2007)
Pathobiology
, vol.74
, pp. 251-8
-
-
Asslaber, M.1
Abuja, P.M.2
Stark, K.3
Eder, J.4
Gottweis, H.5
Trauner, M.6
Samonigg, H.7
Mischinger, H.J.8
Schippinger, W.9
Berghold, A.10
-
4
-
-
34548182286
-
Tissue preparation: Tissue issues
-
10.1038/448959a 17713539
-
Tissue preparation: Tissue issues. N Blow, Nature 2007 448 959 63 10.1038/448959a 17713539
-
(2007)
Nature
, vol.448
, pp. 959-63
-
-
Blow, N.1
-
5
-
-
52249116747
-
Genome-wide copy number alterations detection in fresh frozen and matched FFPE samples using SNP 6.0 arrays
-
10.1002/gcc.20599 18663747
-
Genome-wide copy number alterations detection in fresh frozen and matched FFPE samples using SNP 6.0 arrays. M Tuefferd A De Bondt I Van Den Wyngaert W Talloen T Verbeke B Carvalho DA Clevert M Alifano N Raghavan D Amaratunga, Genes Chromosomes Cancer 2008 47 957 64 10.1002/gcc.20599 18663747
-
(2008)
Genes Chromosomes Cancer
, vol.47
, pp. 957-64
-
-
Tuefferd, M.1
De Bondt, A.2
Den V., W.I.3
Talloen, W.4
Verbeke, T.5
Carvalho, B.6
Clevert, D.A.7
Alifano, M.8
Raghavan, N.9
Amaratunga, D.10
-
6
-
-
41749121507
-
Optimization of the Affymetrix GeneChip Mapping 10K 2.0 Assay for routine clinical use on formalin-fixed paraffin-embedded tissues
-
18303412
-
Optimization of the Affymetrix GeneChip Mapping 10K 2.0 Assay for routine clinical use on formalin-fixed paraffin-embedded tissues. M Lyons-Weiler J Hagenkord C Sciulli R Dhir FA Monzon, Diagn Mol Pathol 2008 17 3 13 18303412
-
(2008)
Diagn Mol Pathol
, vol.17
, pp. 3-13
-
-
Lyons-Weiler, M.1
Hagenkord, J.2
Sciulli, C.3
Dhir, R.4
Monzon, F.A.5
-
7
-
-
33847751110
-
High-resolution copy number analysis of paraffin-embedded archival tissue using SNP BeadArrays
-
17267813 10.1101/gr.5686107
-
High-resolution copy number analysis of paraffin-embedded archival tissue using SNP BeadArrays. J Oosting EH Lips R van Eijk PH Eilers K Szuhai C Wijmenga H Morreau T van Wezel, Genome Res 2007 17 368 76 17267813 10.1101/gr.5686107
-
(2007)
Genome Res
, vol.17
, pp. 368-76
-
-
Oosting, J.1
Lips, E.H.2
Van Eijk, R.3
Eilers, P.H.4
Szuhai, K.5
Wijmenga, C.6
Morreau, H.7
Van Wezel, T.8
-
8
-
-
28544450977
-
Reliable high-throughput genotyping and loss-of-heterozygosity detection in formalin-fixed, paraffin-embedded tumors using single nucleotide polymorphism arrays
-
10.1158/0008-5472.CAN-05-2486 16288005
-
Reliable high-throughput genotyping and loss-of-heterozygosity detection in formalin-fixed, paraffin-embedded tumors using single nucleotide polymorphism arrays. EH Lips JW Dierssen R van Eijk J Oosting PH Eilers RA Tollenaar EJ de Graaf R van't Slot C Wijmenga H Morreau, Cancer Res 2005 65 10188 91 10.1158/0008-5472.CAN-05-2486 16288005
-
(2005)
Cancer Res
, vol.65
, pp. 10188-91
-
-
Lips, E.H.1
Dierssen, J.W.2
Van Eijk, R.3
Oosting, J.4
Eilers, P.H.5
Tollenaar, R.A.6
De Graaf, E.J.7
Van'T Slot, R.8
Wijmenga, C.9
Morreau, H.10
-
9
-
-
34047245312
-
Genome-wide, high-resolution detection of copy number, loss of heterozygosity, and genotypes from formalin-fixed, paraffin-embedded tumor tissue using microarrays
-
10.1158/0008-5472.CAN-06-3597 17363572
-
Genome-wide, high-resolution detection of copy number, loss of heterozygosity, and genotypes from formalin-fixed, paraffin-embedded tumor tissue using microarrays. S Jacobs ER Thompson Y Nannya G Yamamoto R Pillai S Ogawa DK Bailey IG Campbell, Cancer Res 2007 67 2544 51 10.1158/0008-5472.CAN- 06-3597 17363572
-
(2007)
Cancer Res
, vol.67
, pp. 2544-51
-
-
Jacobs, S.1
Thompson, E.R.2
Nannya, Y.3
Yamamoto, G.4
Pillai, R.5
Ogawa, S.6
Bailey, D.K.7
Campbell, I.G.8
-
11
-
-
77951631386
-
The isolation of nucleic acids from fixed, paraffin-embedded tissues-which methods are useful when?
-
17579711 10.1371/journal.pone.0000537
-
The isolation of nucleic acids from fixed, paraffin-embedded tissues-which methods are useful when? MT Gilbert T Haselkorn M Bunce JJ Sanchez SB Lucas LD Jewell EV Marck M Worobey, PLoS ONE 2007 2 e537 17579711 10.1371/journal.pone.0000537
-
(2007)
PLoS ONE
, vol.2
, pp. 537
-
-
Gilbert, M.T.1
Haselkorn, T.2
Bunce, M.3
Sanchez, J.J.4
Lucas, S.B.5
Jewell, L.D.6
Marck, E.V.7
Worobey, M.8
-
12
-
-
0037633991
-
PCR analysis in archival postmortem tissues
-
12782767 10.1136/mp.56.3.184
-
PCR analysis in archival postmortem tissues. S Bonin F Petrera B Niccolini G Stanta, Mol Pathol 2003 56 184 6 12782767 10.1136/mp.56.3.184
-
(2003)
Mol Pathol
, vol.56
, pp. 184-6
-
-
Bonin, S.1
Petrera, F.2
Niccolini, B.3
Stanta, G.4
-
13
-
-
0036898005
-
Effect of fixatives and tissue processing on the content and integrity of nucleic acids
-
12466110
-
Effect of fixatives and tissue processing on the content and integrity of nucleic acids. M Srinivasan D Sedmak S Jewell, Am J Pathol 2002 161 1961 71 12466110
-
(2002)
Am J Pathol
, vol.161
, pp. 1961-71
-
-
Srinivasan, M.1
Sedmak, D.2
Jewell, S.3
-
14
-
-
12844283887
-
Comparison of archival plasma and formalin-fixed paraffin-embedded tissue for genotyping in hepatocellular carcinoma
-
15668502
-
Comparison of archival plasma and formalin-fixed paraffin-embedded tissue for genotyping in hepatocellular carcinoma. MI Sjoholm G Hoffmann S Lindgren J Dillner J Carlson, Cancer Epidemiol Biomarkers Prev 2005 14 251 5 15668502
-
(2005)
Cancer Epidemiol Biomarkers Prev
, vol.14
, pp. 251-5
-
-
Sjoholm, M.I.1
Hoffmann, G.2
Lindgren, S.3
Dillner, J.4
Carlson, J.5
-
15
-
-
46449121669
-
Analysis of molecular inversion probe performance for allele copy number determination
-
18028543 10.1186/gb-2007-8-11-r246
-
Analysis of molecular inversion probe performance for allele copy number determination. Y Wang M Moorhead G Karlin-Neumann NJ Wang J Ireland S Lin C Chen LM Heiser K Chin L Esserman, Genome Biol 2007 8 R246 18028543 10.1186/gb-2007-8-11-r246
-
(2007)
Genome Biol
, vol.8
, pp. 246
-
-
Wang, Y.1
Moorhead, M.2
Karlin-Neumann, G.3
Wang, N.J.4
Ireland, J.5
Lin, S.6
Chen, C.7
Heiser, L.M.8
Chin, K.9
Esserman, L.10
-
16
-
-
0037685262
-
Multiplexed genotyping with sequence-tagged molecular inversion probes
-
10.1038/nbt821 12730666
-
Multiplexed genotyping with sequence-tagged molecular inversion probes. P Hardenbol J Baner M Jain M Nilsson EA Namsaraev GA Karlin-Neumann H Fakhrai-Rad M Ronaghi TD Willis U Landegren, Nat Biotechnol 2003 21 673 8 10.1038/nbt821 12730666
-
(2003)
Nat Biotechnol
, vol.21
, pp. 673-8
-
-
Hardenbol, P.1
Baner, J.2
Jain, M.3
Nilsson, M.4
Namsaraev, E.A.5
Karlin-Neumann, G.A.6
Fakhrai-Rad, H.7
Ronaghi, M.8
Willis, T.D.9
Landegren, U.10
-
17
-
-
20044386880
-
Highly multiplexed molecular inversion probe genotyping: Over 10,000 targeted SNPs genotyped in a single tube assay
-
15687290 10.1101/gr.3185605
-
Highly multiplexed molecular inversion probe genotyping: over 10,000 targeted SNPs genotyped in a single tube assay. P Hardenbol F Yu J Belmont J Mackenzie C Bruckner T Brundage A Boudreau S Chow J Eberle A Erbilgin, Genome Res 2005 15 269 75 15687290 10.1101/gr.3185605
-
(2005)
Genome Res
, vol.15
, pp. 269-75
-
-
Hardenbol, P.1
Yu, F.2
Belmont, J.3
MacKenzie, J.4
Bruckner, C.5
Brundage, T.6
Boudreau, A.7
Chow, S.8
Eberle, J.9
Erbilgin, A.10
-
18
-
-
33748050107
-
Molecular inversion probe analysis of gene copy alterations reveals distinct categories of colorectal carcinoma
-
10.1158/0008-5472.CAN-06-0595 16912164
-
Molecular inversion probe analysis of gene copy alterations reveals distinct categories of colorectal carcinoma. H Ji J Kumm M Zhang K Farnam K Salari M Faham JM Ford RW Davis, Cancer Res 2006 66 7910 9 10.1158/0008-5472. CAN-06-0595 16912164
-
(2006)
Cancer Res
, vol.66
, pp. 7910-9
-
-
Ji, H.1
Kumm, J.2
Zhang, M.3
Farnam, K.4
Salari, K.5
Faham, M.6
Ford, J.M.7
Davis, R.W.8
-
19
-
-
63449130505
-
Molecular Inversion Probes and Universal Tag Arrays: Application to Highplex Targeted SNP Genotyping
-
Molecular Inversion Probes and Universal Tag Arrays: Application to Highplex Targeted SNP Genotyping. G Karlin-Neumann M Sedova R Sapolsky J Forman Y Wang M Moorhead M Faham, Genetic Variation a Laboratory Manual, Weiner MP, Gabriel SB, Stephens JC, 2007 199 211
-
(2007)
Genetic Variation A Laboratory Manual Weiner MP, Gabriel SB, Stephens JC
, pp. 199-211
-
-
Karlin-Neumann, G.1
Sedova, M.2
Sapolsky, R.3
Forman, J.4
Wang, Y.5
Moorhead, M.6
Faham, M.7
-
20
-
-
29244478888
-
Allele quantification using molecular inversion probes (MIP)
-
16314297 10.1093/nar/gni177
-
Allele quantification using molecular inversion probes (MIP). Y Wang M Moorhead G Karlin-Neumann M Falkowski C Chen F Siddiqui RW Davis TD Willis M Faham, Nucleic Acids Res 2005 33 e183 16314297 10.1093/nar/gni177
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 183
-
-
Wang, Y.1
Moorhead, M.2
Karlin-Neumann, G.3
Falkowski, M.4
Chen, C.5
Siddiqui, F.6
Davis, R.W.7
Willis, T.D.8
Faham, M.9
-
21
-
-
33947326291
-
Surgical specimen identification errors: A new measure of quality in surgical care
-
10.1016/j.surg.2006.08.018 17383521
-
Surgical specimen identification errors: a new measure of quality in surgical care. MA Makary J Epstein PJ Pronovost EA Millman EC Hartmann JA Freischlag, Surgery 2007 141 450 5 10.1016/j.surg.2006.08.018 17383521
-
(2007)
Surgery
, vol.141
, pp. 450-5
-
-
Makary, M.A.1
Epstein, J.2
Pronovost, P.J.3
Millman, E.A.4
Hartmann, E.C.5
Freischlag, J.A.6
-
22
-
-
8844235059
-
Identification errors in pathology and laboratory medicine
-
vii 10.1016/j.cll.2004.05.013 15555752
-
Identification errors in pathology and laboratory medicine. PN Valenstein RL Sirota, Clin Lab Med 2004 24 979 96 vii 10.1016/j.cll.2004.05.013 15555752
-
(2004)
Clin Lab Med
, vol.24
, pp. 979-96
-
-
Valenstein, P.N.1
Sirota, R.L.2
-
23
-
-
20144389795
-
Fractional genomic alteration detected by array-based comparative genomic hybridization independently predicts survival after hepatic resection for metastatic colorectal cancer
-
10.1158/1078-0432.CCR-04-1418 15756001
-
Fractional genomic alteration detected by array-based comparative genomic hybridization independently predicts survival after hepatic resection for metastatic colorectal cancer. KR Mehta K Nakao MB Zuraek DT Ruan EK Bergsland AP Venook DH Moore TA Tokuyasu AN Jain RS Warren, Clin Cancer Res 2005 11 1791 7 10.1158/1078-0432.CCR-04-1418 15756001
-
(2005)
Clin Cancer Res
, vol.11
, pp. 1791-7
-
-
Mehta, K.R.1
Nakao, K.2
Zuraek, M.B.3
Ruan, D.T.4
Bergsland, E.K.5
Venook, A.P.6
Moore, D.H.7
Tokuyasu, T.A.8
Jain, A.N.9
Warren, R.S.10
-
24
-
-
48349124823
-
Genomic alterations indicate tumor origin and varied metastatic potential of disseminated cells from prostate cancer patients
-
10.1158/0008-5472.CAN-08-0812 18632612
-
Genomic alterations indicate tumor origin and varied metastatic potential of disseminated cells from prostate cancer patients. IN Holcomb DI Grove M Kinnunen CL Friedman IS Gallaher TM Morgan CL Sather JJ Delrow PS Nelson PH Lange, Cancer Res 2008 68 5599 608 10.1158/0008-5472.CAN-08-0812 18632612
-
(2008)
Cancer Res
, vol.68
, pp. 5599-608
-
-
Holcomb, I.N.1
Grove, D.I.2
Kinnunen, M.3
Friedman, C.L.4
Gallaher, I.S.5
Morgan, T.M.6
Sather, C.L.7
Delrow, J.J.8
Nelson, P.S.9
Lange, P.H.10
-
25
-
-
34548543757
-
Can bladder adenocarcinomas be distinguished from schistosomiasis- associated bladder cancers by using array comparative genomic hybridization analysis?
-
10.1016/j.cancergencyto.2007.06.017 17854674
-
Can bladder adenocarcinomas be distinguished from schistosomiasis- associated bladder cancers by using array comparative genomic hybridization analysis? H Vauhkonen T Bohling S Eissa S Shoman S Knuutila, Cancer Genet Cytogenet 2007 177 153 7 10.1016/j.cancergencyto.2007.06.017 17854674
-
(2007)
Cancer Genet Cytogenet
, vol.177
, pp. 153-7
-
-
Vauhkonen, H.1
Bohling, T.2
Eissa, S.3
Shoman, S.4
Knuutila, S.5
-
26
-
-
2942616982
-
Genome characteristics of primary carcinomas, local recurrences, carcinomatoses, and liver metastases from colorectal cancer patients
-
14977426 10.1186/1476-4598-3-6
-
Genome characteristics of primary carcinomas, local recurrences, carcinomatoses, and liver metastases from colorectal cancer patients. CB Diep MR Teixeira L Thorstensen JN Wiig M Eknaes JM Nesland KE Giercksky B Johansson RA Lothe, Mol Cancer 2004 3 6 14977426 10.1186/1476-4598-3-6
-
(2004)
Mol Cancer
, vol.3
, pp. 6
-
-
Diep, C.B.1
Teixeira, M.R.2
Thorstensen, L.3
Wiig, J.N.4
Eknaes, M.5
Nesland, J.M.6
Giercksky, K.E.7
Johansson, B.8
Lothe, R.A.9
-
27
-
-
25444529450
-
Whole genome SNP arrays using DNA derived from formalin-fixed, paraffin-embedded ovarian tumor tissue
-
10.1002/humu.20220 16116623
-
Whole genome SNP arrays using DNA derived from formalin-fixed, paraffin-embedded ovarian tumor tissue. ER Thompson SC Herbert SM Forrest IG Campbell, Hum Mutat 2005 26 384 9 10.1002/humu.20220 16116623
-
(2005)
Hum Mutat
, vol.26
, pp. 384-9
-
-
Thompson, E.R.1
Herbert, S.C.2
Forrest, S.M.3
Campbell, I.G.4
-
28
-
-
47149087914
-
GeneCount: Genome-wide calculation of absolute tumor DNA copy numbers from array comparative genomic hybridization data
-
18500990 10.1186/gb-2008-9-5-r86
-
GeneCount: genome-wide calculation of absolute tumor DNA copy numbers from array comparative genomic hybridization data. H Lyng M Lando RS Brovig DH Svendsrud M Johansen E Galteland OT Brustugun LA Meza-Zepeda O Myklebost GB Kristensen, Genome Biol 2008 9 R86 18500990 10.1186/gb-2008-9-5-r86
-
(2008)
Genome Biol
, vol.9
, pp. 86
-
-
Lyng, H.1
Lando, M.2
Brovig, R.S.3
Svendsrud, D.H.4
Johansen, M.5
Galteland, E.6
Brustugun, O.T.7
Meza-Zepeda, L.A.8
Myklebost, O.9
Kristensen, G.B.10
-
29
-
-
42449097754
-
SiDCoN: A tool to aid scoring of DNA copy number changes in SNP chip data
-
17971856 10.1371/journal.pone.0001093
-
SiDCoN: a tool to aid scoring of DNA copy number changes in SNP chip data. DJ Nancarrow HY Handoko MS Stark DC Whiteman NK Hayward, PLoS ONE 2007 2 e1093 17971856 10.1371/journal.pone.0001093
-
(2007)
PLoS ONE
, vol.2
, pp. 1093
-
-
Nancarrow, D.J.1
Handoko, H.Y.2
Stark, M.S.3
Whiteman, D.C.4
Hayward, N.K.5
-
30
-
-
0042093747
-
Identification of Stk6/STK15 as a candidate low-penetrance tumor-susceptibility gene in mouse and human
-
10.1038/ng1220 12881723
-
Identification of Stk6/STK15 as a candidate low-penetrance tumor-susceptibility gene in mouse and human. A Ewart-Toland P Briassouli JP de Koning JH Mao J Yuan F Chan L MacCarthy-Morrogh BA Ponder H Nagase J Burn, Nat Genet 2003 34 403 12 10.1038/ng1220 12881723
-
(2003)
Nat Genet
, vol.34
, pp. 403-12
-
-
Ewart-Toland, A.1
Briassouli, P.2
De Koning, J.P.3
Mao, J.H.4
Yuan, J.5
Chan, F.6
MacCarthy-Morrogh, L.7
Ponder, B.A.8
Nagase, H.9
Burn, J.10
|