-
1
-
-
0037032835
-
The protein kinase complement of the human genome
-
Manning G, Whyte DB, Martinez R, Hunter T, Sudarsanam S. The protein kinase complement of the human genome. Science 2002;298:1912-34.
-
(2002)
Science
, vol.298
, pp. 1912-1934
-
-
Manning, G.1
Whyte, D.B.2
Martinez, R.3
Hunter, T.4
Sudarsanam, S.5
-
2
-
-
0034383949
-
The regulation of protein function by multisite phosphorylation-A 25 year update
-
Cohen P. The regulation of protein function by multisite phosphorylation-a 25 year update. Trends Biochem Sci 2000;25:596-601.
-
(2000)
Trends Biochem Sci
, vol.25
, pp. 596-601
-
-
Cohen, P.1
-
3
-
-
0034797512
-
The role of protein phosphorylation in human health and disease-delivered on June 30th 2001 at the FEBS Meeting in Lisbon
-
Cohen P. The role of protein phosphorylation in human health and disease- delivered on June 30th 2001 at the FEBS Meeting in Lisbon. Eur J Biochem 2001; 268:5001-10.
-
(2001)
Eur J Biochem
, vol.268
, pp. 5001-5010
-
-
Cohen, P.1
-
4
-
-
0031457622
-
Signaling through scaffold, anchoring, and adaptor proteins
-
Pawson T, Scott JD. Signaling through scaffold, anchoring, and adaptor proteins. Science 1997;278:2075-80.
-
(1997)
Science
, vol.278
, pp. 2075-2080
-
-
Pawson, T.1
Scott, J.D.2
-
5
-
-
0034614490
-
Signaling-2000 and beyond
-
Hunter T. Signaling-2000 and beyond. Cell 2000;100:113-27.
-
(2000)
Cell
, vol.100
, pp. 113-127
-
-
Hunter, T.1
-
6
-
-
0036097364
-
The origins of protein phosphorylation
-
Cohen P. The origins of protein phosphorylation. Nat Cell Biol 2002;4:E127-30.
-
(2002)
Nat Cell Biol
, vol.4
, pp. E127-E130
-
-
Cohen, P.1
-
8
-
-
85027908516
-
Application of molecular technologies for phosphoproteomic analysis of clinical samples
-
preß
-
Pierobon M, Wulfkuhle J, Liotta L, Petricoin E. Application of molecular technologies for phosphoproteomic analysis of clinical samples. Oncogene 2014 (in preß).
-
(2014)
Oncogene
-
-
Pierobon, M.1
Wulfkuhle, J.2
Liotta, L.3
Petricoin, E.4
-
9
-
-
33750456519
-
Global, in vivo, and sitespecific phosphorylation dynamics in signaling networks
-
Olsen JV, Blagoev B, Gnad F, Macek B, Kumar C, et al. Global, in vivo, and sitespecific phosphorylation dynamics in signaling networks. Cell 2006;127:635-48.
-
(2006)
Cell
, vol.127
, pp. 635-648
-
-
Olsen, J.V.1
Blagoev, B.2
Gnad, F.3
Macek, B.4
Kumar, C.5
-
10
-
-
49449085504
-
A quantitative atlas of mitotic phosphorylation
-
Dephoure N, Zhou C, Villen J, Beausoleil SA, Bakalarski CE, et al. A quantitative atlas of mitotic phosphorylation. Proc Natl Acad Sci U S A 2008;105:10762-7.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 10762-10767
-
-
Dephoure, N.1
Zhou, C.2
Villen, J.3
Beausoleil, S.A.4
Bakalarski, C.E.5
-
11
-
-
70350462371
-
Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions
-
Mayya V, Lundgren DH, Hwang SI, Rezaul K, Wu L, et al. Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions. Sci Signal 2009;2:ra46.
-
(2009)
Sci Signal
, vol.2
, pp. ra46
-
-
Mayya, V.1
Lundgren, D.H.2
Hwang, S.I.3
Rezaul, K.4
Wu, L.5
-
12
-
-
36849065315
-
Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer
-
Rikova K, Guo A, Zeng Q, Poßemato A, Yu J, et al. Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer. Cell 2007;131:1190-203.
-
(2007)
Cell
, vol.131
, pp. 1190-1203
-
-
Rikova, K.1
Guo, A.2
Zeng, Q.3
Poßemato, A.4
Yu, J.5
-
13
-
-
34250743173
-
Systematic discovery of in vivo phosphorylation networks
-
Linding R, Jensen LJ, Ostheimer GJ, vanVugt MA, Jorgensen C, et al. Systematic discovery of in vivo phosphorylation networks. Cell 2007;129:1415-26.
-
(2007)
Cell
, vol.129
, pp. 1415-1426
-
-
Linding, R.1
Jensen, L.J.2
Ostheimer, G.J.3
Van Vugt, M.A.4
Jorgensen, C.5
-
14
-
-
84890641204
-
The coming of age of phosphoproteomics-fromlarge data sets to inference of protein functions
-
Roux PP, Thibault P. The coming of age of phosphoproteomics-fromlarge data sets to inference of protein functions. Mol Cell Proteomics 2013;12:3453-64.
-
(2013)
Mol Cell Proteomics
, vol.12
, pp. 3453-3464
-
-
Roux, P.P.1
Thibault, P.2
-
15
-
-
84890367496
-
Maß spectrometry-driven phosphoproteomics: Patterning the systems biology mosaic
-
Junger MA, Aebersold R. Maß spectrometry-driven phosphoproteomics: patterning the systems biology mosaic. Wiley Interdiscip Rev Dev Biol 2014;3:83-112.
-
(2014)
Wiley Interdiscip Rev Dev Biol
, vol.3
, pp. 83-112
-
-
Junger, M.A.1
Aebersold, R.2
-
16
-
-
84868501812
-
Sample preparation and analytical strategies for large-scale phosphoproteomics experiments
-
Kanshin E, Michnick S, Thibault P. Sample preparation and analytical strategies for large-scale phosphoproteomics experiments. Semin Cell Dev Biol 2012;23:843-53.
-
(2012)
Semin Cell Dev Biol
, vol.23
, pp. 843-853
-
-
Kanshin, E.1
Michnick, S.2
Thibault, P.3
-
18
-
-
0033434080
-
Probability-based protein identification by searching sequence databases using maß spectrometry data
-
Perkins DN, Pappin DJC, Creasy DM, Cottrell JS. Probability-based protein identification by searching sequence databases using maß spectrometry data. Electrophoresis 1999;20:3551-67.
-
(1999)
Electrophoresis
, vol.20
, pp. 3551-3567
-
-
Perkins, D.N.1
Pappin, D.J.C.2
Creasy, D.M.3
Cottrell, J.S.4
-
19
-
-
0000857494
-
An approach to correlate tandem maß spectral data of peptides with amino acid sequences in a protein database
-
Eng JK, McCormack AL, Yates JR. An approach to correlate tandem maß spectral data of peptides with amino acid sequences in a protein database. J Am Soc Maß Spectrom 1994;5:976-89.
-
(1994)
J Am Soc Maß Spectrom
, vol.5
, pp. 976-989
-
-
Eng, J.K.1
Mccormack, A.L.2
Yates, J.R.3
-
20
-
-
84860879590
-
Modification site localization scoring: Strategies and performance
-
Chalkley RJ, Clauser KR. Modification site localization scoring: Strategies and performance. Mol Cell Proteomics 2012;11:3-14.
-
(2012)
Mol Cell Proteomics
, vol.11
, pp. 3-14
-
-
Chalkley, R.J.1
Clauser, K.R.2
-
21
-
-
33749853607
-
A probability-based approach for high-throughput protein phosphorylation analysis and site localization
-
Beausoleil SA, Villen J, Gerber SA, Rush J, Gygi SP. A probability-based approach for high-throughput protein phosphorylation analysis and site localization. Nat Biotechnol 2006;24:1285-92.
-
(2006)
Nat Biotechnol
, vol.24
, pp. 1285-1292
-
-
Beausoleil, S.A.1
Villen, J.2
Gerber, S.A.3
Rush, J.4
Gygi, S.P.5
-
22
-
-
79953212975
-
Confident phosphorylation site localization using the Mascot Delta Score
-
Savitski MM, Lemeer S, Boesche M, Lang M, Mathieson T, et al. Confident phosphorylation site localization using the Mascot Delta Score. Mol Cell Proteomics 2011; 10(M110):003830.
-
(2011)
Mol Cell Proteomics
, vol.10
, Issue.M110
, pp. 003830
-
-
Savitski, M.M.1
Lemeer, S.2
Boesche, M.3
Lang, M.4
Mathieson, T.5
-
23
-
-
79960181605
-
Modification site localization scoring integrated into a search engine
-
Baker PR, Trinidad JC, Chalkley RJ. Modification site localization scoring integrated into a search engine. Mol Cell Proteomics 2011;10(M111):008078.
-
(2011)
Mol Cell Proteomics
, vol.10
, Issue.M111
, pp. 008078
-
-
Baker, P.R.1
Trinidad, J.C.2
Chalkley, R.J.3
-
24
-
-
82755182013
-
Universal and confident phosphorylation site localization using phosphors
-
Taus T, Kocher T, Pichler P, Paschke C, Schmidt A, et al.Universal and confident phosphorylation site localization using phosphors. J Proteome Res 2011;10:5354-62.
-
(2011)
J Proteome Res
, vol.10
, pp. 5354-5362
-
-
Taus, T.1
Kocher, T.2
Pichler, P.3
Paschke, C.4
Schmidt, A.5
-
25
-
-
84887052462
-
Luciphor: Algorithm for phosphorylation site localization with false localization rate estimation using modified target-decoy approach
-
Fermin D, Walmsley SJ, Gingras AC, Choi H, Nesvizhskii AI. Luciphor: Algorithm for phosphorylation site localization with false localization rate estimation using modified target-decoy approach. Mol Cell Proteomics 2013;12:3409-19.
-
(2013)
Mol Cell Proteomics
, vol.12
, pp. 3409-3419
-
-
Fermin, D.1
Walmsley, S.J.2
Gingras, A.C.3
Choi, H.4
Nesvizhskii, A.I.5
-
26
-
-
84874998505
-
D-score: A search engine independent MD-score
-
Vaudel M, Breiter D, Beck F, Rahnenfuhrer J, Martens L, et al. D-score: A search engine independent MD-score. Proteomics 2013;13:1036-41.
-
(2013)
Proteomics
, vol.13
, pp. 1036-1041
-
-
Vaudel, M.1
Breiter, D.2
Beck, F.3
Rahnenfuhrer, J.4
Martens, L.5
-
27
-
-
84879654317
-
A large synthetic peptide and phosphopeptide reference library for maß spectrometry-based proteomics
-
Marx H, Lemeer S, Schliep JE, Matheron L, Mohammed S, et al. A large synthetic peptide and phosphopeptide reference library for maß spectrometry-based proteomics. Nat Biotechnol 2013;31:557-64.
-
(2013)
Nat Biotechnol
, vol.31
, pp. 557-564
-
-
Marx, H.1
Lemeer, S.2
Schliep, J.E.3
Matheron, L.4
Mohammed, S.5
-
28
-
-
84893871020
-
Comparison of alternative MS/MS and bioinformatics approaches for confident phosphorylation site localization
-
Wiese H, Kuhlmann K, Wiese S, Stoepel NS, Pawlas M, et al. Comparison of alternative MS/MS and bioinformatics approaches for confident phosphorylation site localization. J Proteome Res 2014;13(2):1128-37.
-
(2014)
J Proteome Res
, vol.13
, Issue.2
, pp. 1128-1137
-
-
Wiese, H.1
Kuhlmann, K.2
Wiese, S.3
Stoepel, N.S.4
Pawlas, M.5
-
29
-
-
70349131530
-
The phosphoproteomics data explosion
-
Lemeer S, Heck AJ. The phosphoproteomics data explosion. Curr Opin Chem Biol 2009;13:414-20.
-
(2009)
Curr Opin Chem Biol
, vol.13
, pp. 414-420
-
-
Lemeer, S.1
Heck, A.J.2
-
30
-
-
78651320816
-
Phospho.ELM: A database of phosphorylation sites-update 2011
-
Dinkel H, Chica C, Via A, Gould CM, Jensen LJ, et al. Phospho.ELM: A database of phosphorylation sites-update 2011. Nucleic Acids Res 2011;39:D261-7.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. D261-D267
-
-
Dinkel, H.1
Chica, C.2
Via, A.3
Gould, C.M.4
Jensen, L.J.5
-
31
-
-
84857047339
-
PhosphoSitePlus: A comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse
-
Hornbeck PV, Kornhauser JM, Tkachev S, Zhang B, Skrzypek E, et al. PhosphoSitePlus: A comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse. Nucleic Acids Res 2012;40:D261-D70.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. D261-D270
-
-
Hornbeck, P.V.1
Kornhauser, J.M.2
Tkachev, S.3
Zhang, B.4
Skrzypek, E.5
-
32
-
-
58149193222
-
Human protein reference database-2009 update
-
Keshava Prasad TS, Goel R, Kandasamy K, Keerthikumar S, Kumar S, et al. Human protein reference database-2009 update. Nucleic Acids Res 2009;37:D767-D72.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. D767-D772
-
-
Keshava, P.T.S.1
Goel, R.2
Kandasamy, K.3
Keerthikumar, S.4
Kumar, S.5
-
33
-
-
84891783174
-
Activities at the Universal protein resource (UniProt)
-
Apweiler R, Bateman A, Martin MJ, O'Donovan C, Magrane M, et al. Activities at the Universal Protein Resource (UniProt). Nucleic Acids Res 2014;42:D191-D8.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D191-D198
-
-
Apweiler, R.1
Bateman, A.2
Martin, M.J.3
O'Donovan, C.4
Magrane, M.5
-
34
-
-
75549090366
-
Phosphat: The Arabidopsis thaliana phosphorylation site database. An update
-
Durek P, Schmidt R, Heazlewood JL, Jones A, MacLean D, et al. Phosphat: The Arabidopsis thaliana phosphorylation site database. An update. Nucleic Acids Res 2010;38:D828-D34.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. D828-D834
-
-
Durek, P.1
Schmidt, R.2
Heazlewood, J.L.3
Jones, A.4
Maclean, D.5
-
36
-
-
35348839586
-
Phospho-Pep-A phosphoproteome resource for systems biology research in Drosophila Kc167 cells
-
Bodenmiller B, Malmstrom J, Gerrits B, Campbell D, Lam H, et al. PhosphoPep-a phosphoproteome resource for systems biology research in Drosophila Kc167 cells. Mol Syst Biol 2007;3:139.
-
(2007)
Mol Syst Biol
, vol.3
, pp. 139
-
-
Bodenmiller, B.1
Malmstrom, J.2
Gerrits, B.3
Campbell, D.4
Lam, H.5
-
37
-
-
44149105911
-
PHOSIDA (phosphorylation site database): Management, structural and evolutionary investigation, and prediction of phosphosites
-
Gnad F, Ren S, Cox J, Olsen JV, Macek B, et al. PHOSIDA (phosphorylation site database): Management, structural and evolutionary investigation, and prediction of phosphosites. Genome Biol 2007;8:R250.
-
(2007)
Genome Biol
, vol.8
, pp. R250
-
-
Gnad, F.1
Ren, S.2
Cox, J.3
Olsen, J.V.4
Macek, B.5
-
38
-
-
71049118572
-
Sysptm: A systematic resource for proteomic research on post-translational modifications
-
Li H, Xing X, Ding G, Li Q, Wang C, et al. SysPTM: A systematic resource for proteomic research on post-translational modifications. Mol Cell Proteomics 2009;8: 1839-49.
-
(2009)
Mol Cell Proteomics
, vol.8
, pp. 1839-1849
-
-
Li, H.1
Xing, X.2
Ding, G.3
Li, Q.4
Wang, C.5
-
39
-
-
84876523828
-
DbPTM 3.0: An informative resource for investigating substrate site specificity and functional aßociation of protein post-translational modifications
-
Lu CT, Huang KY, Su MG, Lee TY, Bretana NA, et al. DbPTM 3.0: An informative resource for investigating substrate site specificity and functional aßociation of protein post-translational modifications. Nucleic Acids Res 2013;41:D295-D305.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. D295-D305
-
-
Lu, C.T.1
Huang, K.Y.2
Su, M.G.3
Lee, T.Y.4
Bretana, N.A.5
-
40
-
-
84876557296
-
Construction of human activitybased phosphorylation networks
-
Newman RH, Hu J, Rho HS, Xie Z, Woodard C, et al. Construction of human activitybased phosphorylation networks. Mol Syst Biol 2013;9:655.
-
(2013)
Mol Syst Biol
, vol.9
, pp. 655
-
-
Newman, R.H.1
Hu, J.2
Rho, H.S.3
Xie, Z.4
Woodard, C.5
-
41
-
-
84891361322
-
PhosphoNetworks: A database for human phosphorylation networks
-
Hu J, Rho HS, Newman RH, Zhang J, Zhu H, et al. PhosphoNetworks: A database for human phosphorylation networks. Bioinformatics 2014;30:141-2.
-
(2014)
Bioinformatics
, vol.30
, pp. 141-142
-
-
Hu, J.1
Rho, H.S.2
Newman, R.H.3
Zhang, J.4
Zhu, H.5
-
42
-
-
49549121853
-
Phosphopoint: A comprehensive human kinase interactome and phospho-protein database
-
Yang CY, Chang CH, Yu YL, Lin TC, Lee SA, et al. PhosphoPOINT: A comprehensive human kinase interactome and phospho-protein database. Bioinformatics 2008; 24:i14-i20.
-
(2008)
Bioinformatics
, vol.24
, pp. i14-i20
-
-
Yang, C.Y.1
Chang, C.H.2
Yu, Y.L.3
Lin, T.C.4
Lee, S.A.5
-
43
-
-
0033579464
-
Sequence and structure-based prediction of eukaryotic protein phosphorylation sites
-
Blom N, Gammeltoft S, Brunak S. Sequence and structure-based prediction of eukaryotic protein phosphorylation sites. J Mol Biol 1999;294:1351-62.
-
(1999)
J Mol Biol
, vol.294
, pp. 1351-1362
-
-
Blom, N.1
Gammeltoft, S.2
Brunak, S.3
-
44
-
-
84901445385
-
PhosphoSVM: Prediction of phosphorylation sites by integrating various protein sequence attributes with a support vector machine
-
Dou Y, Yao B, Zhang C. PhosphoSVM: prediction of phosphorylation sites by integrating various protein sequence attributes with a support vector machine. Amino Acids 2014;46:1459-69.
-
(2014)
Amino Acids
, vol.46
, pp. 1459-1469
-
-
Dou, Y.1
Yao, B.2
Zhang, C.3
-
45
-
-
84875173596
-
Computational phosphorylation site prediction in plants using random forests and organism-specific instance weights
-
Trost B, Kusalik A. Computational phosphorylation site prediction in plants using random forests and organism-specific instance weights. Bioinformatics 2013;29: 686-94.
-
(2013)
Bioinformatics
, vol.29
, pp. 686-694
-
-
Trost, B.1
Kusalik, A.2
-
46
-
-
0037422596
-
Structural basis and prediction of substrate specificity in protein serine/threonine kinases
-
Brinkworth RI, Breinl RA, Kobe B. Structural basis and prediction of substrate specificity in protein serine/threonine kinases. Proc Natl Acad Sci U S A 2003;100:74-9.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 74-79
-
-
Brinkworth, R.I.1
Breinl, R.A.2
Kobe, B.3
-
47
-
-
80054937592
-
Computational prediction of eukaryotic phosphorylation sites
-
Trost B, Kusalik A. Computational prediction of eukaryotic phosphorylation sites. Bioinformatics 2011;27:2927-35.
-
(2011)
Bioinformatics
, vol.27
, pp. 2927-2935
-
-
Trost, B.1
Kusalik, A.2
-
48
-
-
78651317205
-
A summary of computational resources for protein phosphorylation
-
Xue Y, Gao X, Cao J, Liu Z, Jin C, et al. A summary of computational resources for protein phosphorylation. Curr Protein Pept Sci 2010;11:485-96.
-
(2010)
Curr Protein Pept Sci
, vol.11
, pp. 485-496
-
-
Xue, Y.1
Gao, X.2
Cao, J.3
Liu, Z.4
Jin, C.5
-
49
-
-
79960979428
-
A large-scale method to measure absolute protein phosphorylation stoichiometries
-
Wu R, Haas W, Dephoure N, Huttlin EL, Zhai B, et al. A large-scale method to measure absolute protein phosphorylation stoichiometries. Nat Methods 2011;8: 677-83.
-
(2011)
Nat Methods
, vol.8
, pp. 677-683
-
-
Wu, R.1
Haas, W.2
Dephoure, N.3
Huttlin, E.L.4
Zhai, B.5
-
50
-
-
48149087568
-
Non-functional phosphorylations?
-
Lienhard GE. Non-functional phosphorylations? Trends Biochem Sci 2008;33: 351-2.
-
(2008)
Trends Biochem Sci
, vol.33
, pp. 351-352
-
-
Lienhard, G.E.1
-
51
-
-
84897408448
-
Cancer genomes: Discerning drivers from paßengers
-
Marx V. Cancer genomes: discerning drivers from paßengers. Nat Methods 2014; 11:375-9.
-
(2014)
Nat Methods
, vol.11
, pp. 375-379
-
-
Marx, V.1
-
53
-
-
84865101601
-
Protein abundance is key to distinguish promiscuous from functional phosphorylation based on evolutionary information
-
Levy ED, Michnick SW, Landry CR. Protein abundance is key to distinguish promiscuous from functional phosphorylation based on evolutionary information. Philos Trans R Soc Lond B Biol Sci 2012;367:2594-606.
-
(2012)
Philos Trans R Soc Lond B Biol Sci
, vol.367
, pp. 2594-2606
-
-
Levy, E.D.1
Michnick, S.W.2
Landry, C.R.3
-
54
-
-
70349546862
-
Global analysis of Cdk1 substrate phosphorylation sites provides insights into evolution
-
Holt LJ, Tuch BB, Villen J, Johnson AD, Gygi SP, et al. Global analysis of Cdk1 substrate phosphorylation sites provides insights into evolution. Science 2009;325: 1682-6.
-
(2009)
Science
, vol.325
, pp. 1682-1686
-
-
Holt, L.J.1
Tuch, B.B.2
Villen, J.3
Johnson, A.D.4
Gygi, S.P.5
-
55
-
-
70349526350
-
Comparative analysis reveals conserved protein phosphorylation networks implicated in multiple diseases
-
Tan CS, Bodenmiller B, Pasculescu A, Jovanovic M, Hengartner MO, et al. Comparative analysis reveals conserved protein phosphorylation networks implicated in multiple diseases. Sci Signal 2009;2:ra39.
-
(2009)
Sci Signal
, vol.2
, pp. ra39
-
-
Tan, C.S.1
Bodenmiller, B.2
Pasculescu, A.3
Jovanovic, M.4
Hengartner, M.O.5
-
56
-
-
77953563038
-
Roles of "junk phosphorylation" in modulating biomolecular aßociation of phosphorylated proteins?
-
Tan CS, Jorgensen C, Linding R. Roles of "junk phosphorylation" in modulating biomolecular aßociation of phosphorylated proteins? Cell Cycle 2010;9:1276-80.
-
(2010)
Cell Cycle
, vol.9
, pp. 1276-1280
-
-
Tan, C.S.1
Jorgensen, C.2
Linding, R.3
-
57
-
-
55749111058
-
Linear motif atlas for phosphorylation-dependent signaling
-
Miller ML, Jensen LJ, Diella F, Jorgensen C, Tinti M, et al. Linear motif atlas for phosphorylation-dependent signaling. Sci Signal 2008;1:ra2.
-
(2008)
Sci Signal
, vol.1
, pp. ra2
-
-
Miller, M.L.1
Jensen, L.J.2
Diella, F.3
Jorgensen, C.4
Tinti, M.5
-
58
-
-
84863138365
-
Oncogene-specific activation of tyrosine kinase networks during prostate cancer progreßion
-
Drake JM, Graham NA, Stoyanova T, Sedghi A, Goldstein AS, et al. Oncogene-specific activation of tyrosine kinase networks during prostate cancer progreßion. Proc Natl Acad Sci U S A 2012;109:1643-8.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 1643-1648
-
-
Drake, J.M.1
Graham, N.A.2
Stoyanova, T.3
Sedghi, A.4
Goldstein, A.S.5
-
59
-
-
78650466243
-
A tißue-specific atlas of mouse protein phosphorylation and expreßion
-
Huttlin EL, Jedrychowski MP, Elias JE, Goswami T, Rad R, et al. A tißue-specific atlas of mouse protein phosphorylation and expreßion. Cell 2010;143:1174-89.
-
(2010)
Cell
, vol.143
, pp. 1174-1189
-
-
Huttlin, E.L.1
Jedrychowski, M.P.2
Elias, J.E.3
Goswami, T.4
Rad, R.5
-
60
-
-
84890133861
-
Multisite phosphorylation networks as signal proceßors for Cdk1
-
Koivomagi M, Ord M, Iofik A, Valk E, Venta R, et al. Multisite phosphorylation networks as signal proceßors for Cdk1. Nat Struct Mol Biol 2013;20:1415-24.
-
(2013)
Nat Struct Mol Biol
, vol.20
, pp. 1415-1424
-
-
Koivomagi, M.1
Ord, M.2
Iofik, A.3
Valk, E.4
Venta, R.5
-
61
-
-
84867153786
-
Systematic analysis of protein phosphorylation networks from phosphoproteomic data
-
Song CX, Ye ML, Liu ZX, Cheng H, Jiang X, et al. Systematic analysis of protein phosphorylation networks from phosphoproteomic data. Mol Cell Proteomics 2012;11: 1070-83.
-
(2012)
Mol Cell Proteomics
, vol.11
, pp. 1070-1083
-
-
Song, C.X.1
Ye, M.L.2
Liu, Z.X.3
Cheng, H.4
Jiang, X.5
-
62
-
-
84879533104
-
Towards systematic discovery of signaling networks in budding yeast filamentous growth streß response using interventional phosphorylation data
-
Zhang Y, Kweon HK, Shively C, Kumar A, Andrews PC. Towards systematic discovery of signaling networks in budding yeast filamentous growth streß response using interventional phosphorylation data. PLoS Comput Biol 2013;9.
-
(2013)
PLoS Comput Biol
, pp. 9
-
-
Zhang, Y.1
Kweon, H.K.2
Shively, C.3
Kumar, A.4
Andrews, P.C.5
-
63
-
-
84902448993
-
Deciphering kinase-substrate relationships by analysis of domain-specific phosphorylation network
-
Damle NP, Mohanty D. Deciphering kinase-substrate relationships by analysis of domain-specific phosphorylation network. Bioinformatics 2014;30(12):1730-8.
-
(2014)
Bioinformatics
, vol.30
, Issue.12
, pp. 1730-1738
-
-
Damle, N.P.1
Mohanty, D.2
-
64
-
-
84876970779
-
The protein interaction landscape of the human CMGC kinase group
-
Varjosalo M, Keskitalo S, Van Drogen A, Nurkkala H, Vichalkovski A, et al. The protein interaction landscape of the human CMGC kinase group. Cell Rep 2013;3: 1306-20.
-
(2013)
Cell Rep
, vol.3
, pp. 1306-1320
-
-
Varjosalo, M.1
Keskitalo, S.2
Van Drogen, A.3
Nurkkala, H.4
Vichalkovski, A.5
-
65
-
-
84886583205
-
Phosphoproteomics-based network medicine
-
Liu Z, Wang Y, Xue Y. Phosphoproteomics-based network medicine. FEBS J 2013; 280:5696-704.
-
(2013)
FEBS J
, vol.280
, pp. 5696-5704
-
-
Liu, Z.1
Wang, Y.2
Xue, Y.3
-
66
-
-
11444260258
-
Principles behind the multifarious control of signal transduction. ERK phosphorylation and kinase/phosphatase control
-
Hornberg JJ, Bruggeman FJ, Binder B, Geest CR, de Vaate AJ, et al. Principles behind the multifarious control of signal transduction. ERK phosphorylation and kinase/phosphatase control. FEBS J 2005;272:244-58.
-
(2005)
FEBS J
, vol.272
, pp. 244-258
-
-
Hornberg, J.J.1
Bruggeman, F.J.2
Binder, B.3
Geest, C.R.4
De Vaate, A.J.5
-
67
-
-
33750299450
-
Protein tyrosine phosphatases: From genes, to function, to disease
-
Tonks NK. Protein tyrosine phosphatases: from genes, to function, to disease. Nat Rev Mol Cell Biol 2006;7:833-46.
-
(2006)
Nat Rev Mol Cell Biol
, vol.7
, pp. 833-846
-
-
Tonks, N.K.1
-
68
-
-
0036285634
-
Mathematical models of protein kinase signal transduction
-
Heinrich R, Neel BG, Rapoport TA. Mathematical models of protein kinase signal transduction. Mol Cell 2002;9:957-70.
-
(2002)
Mol Cell
, vol.9
, pp. 957-970
-
-
Heinrich, R.1
Neel, B.G.2
Rapoport, T.A.3
-
69
-
-
84872816249
-
HuPho: The human phosphatase portal
-
Liberti S, Sacco F, Calderone A, Perfetto L, Iannuccelli M, et al. HuPho: The human phosphatase portal. FEBS J 2013;280:379-87.
-
(2013)
FEBS J
, vol.280
, pp. 379-387
-
-
Liberti, S.1
Sacco, F.2
Calderone, A.3
Perfetto, L.4
Iannuccelli, M.5
-
71
-
-
84864583212
-
The human phosphatase interactome: An intricate family portrait
-
Sacco F, Perfetto L, Castagnoli L, Cesareni G. The human phosphatase interactome: An intricate family portrait. FEBS Lett 2012;586:2732-9.
-
(2012)
FEBS Lett
, vol.586
, pp. 2732-2739
-
-
Sacco, F.1
Perfetto, L.2
Castagnoli, L.3
Cesareni, G.4
-
72
-
-
84892850418
-
PTP-central: A comprehensive resource of protein tyrosine phosphatases in eukaryotic genomes
-
Hatzihristidis T, Liu S, Pryszcz L, Hutchins AP, Gabaldon T, et al. PTP-central: A comprehensive resource of protein tyrosine phosphatases in eukaryotic genomes. Methods 2014;65:156-64.
-
(2014)
Methods
, vol.65
, pp. 156-164
-
-
Hatzihristidis, T.1
Liu, S.2
Pryszcz, L.3
Hutchins, A.P.4
Gabaldon, T.5
-
73
-
-
2942581416
-
Protein tyrosine phosphatases in the human genome
-
Alonso A, Sasin J, Bottini N, Friedberg I, Friedberg I, et al. Protein tyrosine phosphatases in the human genome. Cell 2004;117:699-711.
-
(2004)
Cell
, vol.117
, pp. 699-711
-
-
Alonso, A.1
Sasin, J.2
Bottini, N.3
Friedberg, I.4
Friedberg, I.5
-
74
-
-
0041312681
-
The structure of the cell cycle protein Cdc14 reveals a proline-directed protein phosphatase
-
Gray CH, Good VM, Tonks NK, Barford D. The structure of the cell cycle protein Cdc14 reveals a proline-directed protein phosphatase. EMBO J 2003;22:3524-35.
-
(2003)
EMBO J
, vol.22
, pp. 3524-3535
-
-
Gray, C.H.1
Good, V.M.2
Tonks, N.K.3
Barford, D.4
-
75
-
-
76149134713
-
Novel Ser/Thr protein phosphatase 5 (PP5) regulated targets during DNA damage identified by proteomics analysis
-
Ham BM, Jayachandran H, Yang F, Jaitly N, Polpitiya AD, et al. Novel Ser/Thr protein phosphatase 5 (PP5) regulated targets during DNA damage identified by proteomics analysis. J Proteome Res 2010;9:945-53.
-
(2010)
J Proteome Res
, vol.9
, pp. 945-953
-
-
Ham, B.M.1
Jayachandran, H.2
Yang, F.3
Jaitly, N.4
Polpitiya, A.D.5
-
76
-
-
0027329128
-
Dephosphorylation of distinct sites on microtubule-aßociated protein Map1b by protein phosphatases 1, 2a and 2b
-
Ulloa L, Dombradi V, Diaznido J, Szucs K, Gergely P, et al. Dephosphorylation of distinct sites on microtubule-aßociated protein Map1b by protein phosphatases 1, 2a and 2b. FEBS Lett 1993;330:85-9.
-
(1993)
FEBS Lett
, vol.330
, pp. 85-89
-
-
Ulloa, L.1
Dombradi, V.2
Diaznido, J.3
Szucs, K.4
Gergely, P.5
-
77
-
-
33846945811
-
-
Protein tyrosine phosphatase function: The substrate perspective
-
Tiganis T, Bennett AM. Protein tyrosine phosphatase function: The substrate perspective. Biochem J 2007;402:1-15.
-
(2007)
Biochem J
, vol.402
, pp. 1-15
-
-
Tiganis, T.1
Bennett, A.M.2
-
78
-
-
84878431342
-
Phosphatase: PP2A structural importance, regulation and its aberrant expreßion in cancer
-
Seshacharyulu P, Pandey P, Datta K, Batra SK. Phosphatase: PP2A structural importance, regulation and its aberrant expreßion in cancer. Cancer Lett 2013;335:9-18.
-
(2013)
Cancer Lett
, vol.335
, pp. 9-18
-
-
Seshacharyulu, P.1
Pandey, P.2
Datta, K.3
Batra, S.K.4
-
79
-
-
77953077420
-
A global protein kinase and phosphatase interaction network in yeast
-
Breitkreutz A, Choi H, Sharom JR, Boucher L, Neduva V, et al. A global protein kinase and phosphatase interaction network in yeast. Science 2010;328:1043-6.
-
(2010)
Science
, vol.328
, pp. 1043-1046
-
-
Breitkreutz, A.1
Choi, H.2
Sharom, J.R.3
Boucher, L.4
Neduva, V.5
-
80
-
-
67650360968
-
Unlimited multistability inmultisite phosphorylation systems
-
Thomson M, Gunawardena J. Unlimited multistability inmultisite phosphorylation systems. Nature 2009;460:274-7.
-
(2009)
Nature
, vol.460
, pp. 274-277
-
-
Thomson, M.1
Gunawardena, J.2
-
81
-
-
77956340499
-
An overlapping kinase and phosphatase docking site regulates activity of the retinoblastoma protein
-
Hirschi A, Cecchini M, Steinhardt RC, Schamber MR, Dick FA, et al. An overlapping kinase and phosphatase docking site regulates activity of the retinoblastoma protein. Nat Struct Mol Biol 2010;17:1051-7.
-
(2010)
Nat Struct Mol Biol
, vol.17
, pp. 1051-1057
-
-
Hirschi, A.1
Cecchini, M.2
Steinhardt, R.C.3
Schamber, M.R.4
Dick, F.A.5
-
82
-
-
0033788484
-
A conserved docking motif in MAP kinases common to substrates, activators and regulators
-
Tanoue T, Adachi M, Moriguchi T, Nishida E. A conserved docking motif in MAP kinases common to substrates, activators and regulators. Nat Cell Biol 2000;2: 110-6.
-
(2000)
Nat Cell Biol
, vol.2
, pp. 110-116
-
-
Tanoue, T.1
Adachi, M.2
Moriguchi, T.3
Nishida, E.4
-
83
-
-
33947599132
-
Competition effects shape the response sensitivity and kinetics of phosphorylation cycles in cell signaling
-
Salazar C, Hofer T. Competition effects shape the response sensitivity and kinetics of phosphorylation cycles in cell signaling. Ann N Y Acad Sci 2006;1091: 517-30.
-
(2006)
Ann N Y Acad Sci
, vol.1091
, pp. 517-530
-
-
Salazar, C.1
Hofer, T.2
-
84
-
-
83155181907
-
The SH2 domaincontaining proteins in 21 species establish the provenance and scope of phosphotyrosine signaling in eukaryotes
-
Liu BA, Shah E, Jablonowski K, Stergachis A, Engelmann B, et al. The SH2 domaincontaining proteins in 21 species establish the provenance and scope of phosphotyrosine signaling in eukaryotes. Sci Signal 2011;4:ra83.
-
(2011)
Sci Signal
, vol.4
, pp. ra83
-
-
Liu, B.A.1
Shah, E.2
Jablonowski, K.3
Stergachis, A.4
Engelmann, B.5
-
85
-
-
0036518996
-
Phosphotyrosine-binding domains in signal transduction
-
Yaffe MB. Phosphotyrosine-binding domains in signal transduction. Nat Rev Mol Cell Biol 2002;3:177-86.
-
(2002)
Nat Rev Mol Cell Biol
, vol.3
, pp. 177-186
-
-
Yaffe, M.B.1
-
86
-
-
0035313699
-
Phosphoserine/threonine-binding domains
-
Yaffe MB, Elia AE. Phosphoserine/threonine-binding domains. Curr Opin Cell Biol 2001;13:131-8.
-
(2001)
Curr Opin Cell Biol
, vol.13
, pp. 131-138
-
-
Yaffe, M.B.1
Elia, A.E.2
-
87
-
-
38549086310
-
PepCyber:P ~ PEP: A database of human protein protein interactions mediated by phosphoprotein-binding domains
-
Gong W, Zhou D, Ren Y, Wang Y, Zuo Z, et al. PepCyber:P ~ PEP: A database of human protein protein interactions mediated by phosphoprotein-binding domains. Nucleic Acids Res 2008;36:D679-D83.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. D679-D683
-
-
Gong, W.1
Zhou, D.2
Ren, Y.3
Wang, Y.4
Zuo, Z.5
-
88
-
-
0030273552
-
Binding of the inward rectifier K + channel Kir 2.3 to PSD-95 is regulated by protein kinase A phosphorylation
-
Cohen NA, Brenman JE, Snyder SH, Bredt DS. Binding of the inward rectifier K + channel Kir 2.3 to PSD-95 is regulated by protein kinase A phosphorylation. Neuron 1996;17:759-67.
-
(1996)
Neuron
, vol.17
, pp. 759-767
-
-
Cohen, N.A.1
Brenman, J.E.2
Snyder, S.H.3
Bredt, D.S.4
-
89
-
-
0029939164
-
SOS phosphorylation and disaßociation of the Grb2-SOS complex by the ERK and JNK signaling pathways
-
Chen D, Waters SB, Holt KH, Peßin JE. SOS phosphorylation and disaßociation of the Grb2-SOS complex by the ERK and JNK signaling pathways. J Biol Chem 1996;271:6328-32.
-
(1996)
J Biol Chem
, vol.271
, pp. 6328-6332
-
-
Chen, D.1
Waters, S.B.2
Holt, K.H.3
Peßin, J.E.4
-
90
-
-
0030950608
-
Modular peptide recognition domains in eukaryotic signaling
-
Kuriyan J, Cowburn D. Modular peptide recognition domains in eukaryotic signaling. Annu Rev Biophys Biomol Struct 1997;26:259-88.
-
(1997)
Annu Rev Biophys Biomol Struct
, vol.26
, pp. 259-288
-
-
Kuriyan, J.1
Cowburn, D.2
-
91
-
-
77954040159
-
Quantifying protein- protein interactions in high throughput using protein domain microarrays
-
Kaushansky A, Allen JE, Gordus A, Stiffler MA, Karp ES, et al. Quantifying protein- protein interactions in high throughput using protein domain microarrays. Nat Protoc 2010;5:773-90.
-
(2010)
Nat Protoc
, vol.5
, pp. 773-790
-
-
Kaushansky, A.1
Allen, J.E.2
Gordus, A.3
Stiffler, M.A.4
Karp, E.S.5
-
92
-
-
84877628735
-
Phosphotyrosine signaling proteins that drive oncogenesis tend to be highly interconnected
-
Koytiger G, Kaushansky A, Gordus A, Rush J, Sorger PK, et al. Phosphotyrosine signaling proteins that drive oncogenesis tend to be highly interconnected. Mol Cell Proteomics 2013;12:1204-13.
-
(2013)
Mol Cell Proteomics
, vol.12
, pp. 1204-1213
-
-
Koytiger, G.1
Kaushansky, A.2
Gordus, A.3
Rush, J.4
Sorger, P.K.5
-
93
-
-
84858433310
-
Personal omics profiling reveals dynamic molecular and medical phenotypes
-
Chen R, Mias GI, Li-Pook-Than J, Jiang L, Lam HY, et al. Personal omics profiling reveals dynamic molecular and medical phenotypes. Cell 2012;148:1293-307.
-
(2012)
Cell
, vol.148
, pp. 1293-1307
-
-
Chen, R.1
Mias, G.I.2
Li-Pook-Than, J.3
Jiang, L.4
Lam, H.Y.5
-
94
-
-
84874766054
-
Linking proteomic and transcriptional data through the interactome and epigenome reveals a map of oncogene-induced signaling
-
Huang ßC, Clarke DC, Gosline SJC, Labadorf A, Chouinard CR, et al. Linking proteomic and transcriptional data through the interactome and epigenome reveals a map of oncogene-induced signaling. PLoS Comput Biol 2013;9.
-
(2013)
PLoS Comput Biol
, pp. 9
-
-
Huang, S.S.C.1
Clarke, D.C.2
Gosline, S.J.C.3
Labadorf, A.4
Chouinard, C.R.5
-
95
-
-
84889560325
-
Extracting insight from noisy cellular networks
-
Landry CR, Levy ED, Abd Rabbo D, Taraßov K, Michnick SW. Extracting insight from noisy cellular networks. Cell 2013;155:983-9.
-
(2013)
Cell
, vol.155
, pp. 983-989
-
-
Landry, C.R.1
Levy, E.D.2
Abd, R.D.3
Taraßov, K.4
Michnick, S.W.5
-
96
-
-
27344435774
-
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expreßion profiles
-
Subramanian A, Tamayo P, Mootha VK, Mukherjee S, Ebert BL, et al. Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expreßion profiles. Proc Natl Acad Sci U S A 2005;102:15545-50.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 15545-15550
-
-
Subramanian, A.1
Tamayo, P.2
Mootha, V.K.3
Mukherjee, S.4
Ebert, B.L.5
-
97
-
-
77953238558
-
Integrative genomic and proteomic analyses identify targets for Lkb1-deficient metastatic lung tumors
-
Carretero J, Shimamura T, Rikova K, Jackson AL, Wilkerson MD, et al. Integrative genomic and proteomic analyses identify targets for Lkb1-deficient metastatic lung tumors. Cancer Cell 2010;17:547-59.
-
(2010)
Cancer Cell
, vol.17
, pp. 547-559
-
-
Carretero, J.1
Shimamura, T.2
Rikova, K.3
Jackson, A.L.4
Wilkerson, M.D.5
-
98
-
-
84886083037
-
Reconstructing targetable pathways in lung cancer by integrating diverse omics data
-
Balbin OA, Prensner JR, Sahu A, Yocum A, Shankar S, et al. Reconstructing targetable pathways in lung cancer by integrating diverse omics data. Nat Commun 2013;4: 2617.
-
(2013)
Nat Commun
, vol.4
, pp. 2617
-
-
Balbin, O.A.1
Prensner, J.R.2
Sahu, A.3
Yocum, A.4
Shankar, S.5
-
99
-
-
84873802661
-
Systematic analysis of somatic mutations in phosphorylation signaling predicts novel cancer drivers
-
Reimand J, Bader GD. Systematic analysis of somatic mutations in phosphorylation signaling predicts novel cancer drivers. Mol Syst Biol 2013;9:637.
-
(2013)
Mol Syst Biol
, vol.9
, pp. 637
-
-
Reimand, J.1
Bader, G.D.2
-
100
-
-
84885100832
-
The mutational landscape of phosphorylation signaling in cancer
-
Reimand J, Wagih O, Bader GD. The mutational landscape of phosphorylation signaling in cancer. Sci Rep 2013;3:2651.
-
(2013)
Sci Rep
, vol.3
, pp. 2651
-
-
Reimand, J.1
Wagih, O.2
Bader, G.D.3
-
101
-
-
79551539500
-
Integrative features of the yeast phosphoproteome and protein-protein interaction map
-
Yachie N, Saito R, Sugiyama N, Tomita M, Ishihama Y. Integrative features of the yeast phosphoproteome and protein-protein interaction map. PLoS Comput Biol 2011;7:e1001064.
-
(2011)
PLoS Comput Biol
, vol.7
, pp. e1001064
-
-
Yachie, N.1
Saito, R.2
Sugiyama, N.3
Tomita, M.4
Ishihama, Y.5
-
102
-
-
84896757081
-
The next level of complexity: Croßtalk of posttranslational modifications
-
Venne AS, Kollipara L, Zahedi RP. The next level of complexity: Croßtalk of posttranslational modifications. Proteomics 2014;14:513-24.
-
(2014)
Proteomics
, vol.14
, pp. 513-524
-
-
Venne, A.S.1
Kollipara, L.2
Zahedi, R.P.3
-
103
-
-
72449187655
-
The intersections between O-Glcnacylation and phosphorylation: Implications for multiple signaling pathways
-
Zeidan Q, Hart GW. The intersections between O-GlcNAcylation and phosphorylation: Implications for multiple signaling pathways. J Cell Sci 2010;123:13-22.
-
(2010)
J Cell Sci
, vol.123
, pp. 13-22
-
-
Zeidan, Q.1
Hart, G.W.2
-
104
-
-
84858965099
-
Role of post translational modifications and novel croßtalk between phosphorylation and O-beta-GlcNAc modifications in human claudin-1, -3 and -4
-
Butt AM, Khan IB, Hußain M, Idreß M, Lu J, et al. Role of post translational modifications and novel croßtalk between phosphorylation and O-beta-GlcNAc modifications in human claudin-1, -3 and -4. Mol Biol Rep 2012;39:1359-69.
-
(2012)
Mol Biol Rep
, vol.39
, pp. 1359-1369
-
-
Butt, A.M.1
Khan, I.B.2
Hußain, M.3
Idreß, M.4
Lu, J.5
-
105
-
-
0037166352
-
Dynamic interplay between O-glycosylation and O-phosphorylation of nucleocytoplasmic proteins: Alternative glycosylation/phosphorylation of THR-58, a known mutational hot spot of c-Myc in lymphomas, is regulated by mitogens
-
Kamemura K, Hayes BK, Comer FI, Hart GW. Dynamic interplay between O-glycosylation and O-phosphorylation of nucleocytoplasmic proteins: Alternative glycosylation/phosphorylation of THR-58, a known mutational hot spot of c-Myc in lymphomas, is regulated by mitogens. J Biol Chem 2002;277:19229-35.
-
(2002)
J Biol Chem
, vol.277
, pp. 19229-19235
-
-
Kamemura, K.1
Hayes, B.K.2
Comer, F.I.3
Hart, G.W.4
-
106
-
-
36749010218
-
The age of croßtalk: Phosphorylation, ubiquitination, and beyond
-
Hunter T. The age of croßtalk: phosphorylation, ubiquitination, and beyond. Mol Cell 2007;28:730-8.
-
(2007)
Mol Cell
, vol.28
, pp. 730-738
-
-
Hunter, T.1
-
107
-
-
84864184970
-
Deciphering a global network of functionally aßociated post-translational modifications
-
Minguez P, Parca L, Diella F, Mende DR, Kumar R, et al. Deciphering a global network of functionally aßociated post-translational modifications. Mol Syst Biol 2012;8:599.
-
(2012)
Mol Syst Biol
, vol.8
, pp. 599
-
-
Minguez, P.1
Parca, L.2
Diella, F.3
Mende, D.R.4
Kumar, R.5
-
108
-
-
84902031172
-
Evolution and functional croß-talk of protein post-translational modifications
-
Beltrao P, Bork P, Krogan NJ, van Noort V. Evolution and functional croß-talk of protein post-translational modifications. Mol Syst Biol 2013;9:714.
-
(2013)
Mol Syst Biol
, vol.9
, pp. 714
-
-
Beltrao, P.1
Bork, P.2
Krogan, N.J.3
Van Noort, V.4
-
109
-
-
84875991401
-
Dual coordination of post translational modifications in human protein networks
-
Woodsmith J, Kamburov A, Stelzl U. Dual coordination of post translational modifications in human protein networks. PLoS Comput Biol 2013;9:e1002933.
-
(2013)
PLoS Comput Biol
, vol.9
, pp. e1002933
-
-
Woodsmith, J.1
Kamburov, A.2
Stelzl, U.3
-
110
-
-
84879613791
-
Global analysis of phosphorylation and ubiquitylation croß-talk in protein degradation
-
Swaney DL, Beltrao P, Starita L, Guo A, Rush J, et al. Global analysis of phosphorylation and ubiquitylation croß-talk in protein degradation. Nat Methods 2013;10: 676-82.
-
(2013)
Nat Methods
, vol.10
, pp. 676-682
-
-
Swaney, D.L.1
Beltrao, P.2
Starita, L.3
Guo, A.4
Rush, J.5
-
111
-
-
84879637572
-
Integrated proteomic analysis of post-translationalmodifications by serial enrichment
-
Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, et al. Integrated proteomic analysis of post-translationalmodifications by serial enrichment. NatMethods 2013;10:634-7.
-
(2013)
NatMethods
, vol.10
, pp. 634-637
-
-
Mertins, P.1
Qiao, J.W.2
Patel, J.3
Udeshi, N.D.4
Clauser, K.R.5
-
112
-
-
79960127921
-
Phosphorylation of basic amino acid residues in proteins: Important but easily mißed
-
Ciesla J, Fraczyk T, Rode W. Phosphorylation of basic amino acid residues in proteins: Important but easily mißed. Acta Biochim Pol 2011;58:137-48.
-
(2011)
Acta Biochim Pol
, vol.58
, pp. 137-148
-
-
Ciesla, J.1
Fraczyk, T.2
Rode, W.3
-
113
-
-
84856158810
-
Chasing phosphohistidine, an elusive sibling in the phosphoamino acid family
-
Kee JM, Muir TW. Chasing phosphohistidine, an elusive sibling in the phosphoamino acid family. ACS Chem Biol 2012;7:44-51.
-
(2012)
ACS Chem Biol
, vol.7
, pp. 44-51
-
-
Kee, J.M.1
Muir, T.W.2
-
114
-
-
84879416831
-
A pan-specific antibody for direct detection of protein histidine phosphorylation
-
Kee JM, Oslund RC, Perlman DH, Muir TW. A pan-specific antibody for direct detection of protein histidine phosphorylation. Nat Chem Biol 2013;9:416-21.
-
(2013)
Nat Chem Biol
, vol.9
, pp. 416-421
-
-
Kee, J.M.1
Oslund, R.C.2
Perlman, D.H.3
Muir, T.W.4
-
115
-
-
84864213113
-
Systematic functional prioritization of protein posttranslational modifications
-
Beltrao P, Albanese V, Kenner LR, Swaney DL, Burlingame A, et al. Systematic functional prioritization of protein posttranslational modifications. Cell 2012;150:413-25.
-
(2012)
Cell
, vol.150
, pp. 413-425
-
-
Beltrao, P.1
Albanese, V.2
Kenner, L.R.3
Swaney, D.L.4
Burlingame, A.5
-
117
-
-
38549109487
-
Networkin: A resource for exploring cellular phosphorylation networks
-
Linding R, Jensen LJ, Pasculescu A, Olhovsky M, Colwill K, et al. Networkin: A resource for exploring cellular phosphorylation networks. Nucleic Acids Res 2008;36:D695-D9.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. D695-D699
-
-
Linding, R.1
Jensen, L.J.2
Pasculescu, A.3
Olhovsky, M.4
Colwill, K.5
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