A novel approach for multi-domain and multi-gene family identification provides insights into evolutionary dynamics of disease resistance genes in core eudicot plants

BMC Genomics

Volumn 15, Issue 1, 2014, Pages

  Hofberger, Johannes A ^a,b   Zhou, Beifei ^b,c   Tang, Haibao ^d,e   Jones, Jonathan ^f   Schranz, M Eric ^a  

^a WAGENINGEN UNIVERSITY   (Netherlands)

^b MAX PLANCK INSTITUTE   (Germany)

^c HEIDELBERG INSTITUTE FOR THEORETICAL STUDIES   (Germany)

^d FUJIAN AGRICULTURE AND FORESTRY UNIVERSITY   (China)

^e J CRAIG VENTER INSTITUTE   (United States)

^f SAINSBURY LABORATORY   (United Kingdom)

Author keywords

Big data; Comparative genomics; Molecular evolution; Plant innate immunity; Systems biology

Indexed keywords

VEGETABLE PROTEIN;

ARABIDOPSIS; ARTICLE; CONTROLLED STUDY; DISEASE RESISTANCE; EUDICOT; EVOLUTIONARY ADAPTATION; GENE CLUSTER; GENE IDENTIFICATION; GENE LOCUS; GENETIC ASSOCIATION; GENETIC SCREENING; GENOME ANALYSIS; HIDDEN MARKOV MODEL; INNATE IMMUNITY; NB LRR GENE; NONHUMAN; PLANT BREEDING; PLANT DEFENSE; PLANT GENE; SEQUENCE HOMOLOGY; SYNTENY; TANDEM REPEAT; BIOLOGY; CHEMISTRY; CLASSIFICATION; CLUSTER ANALYSIS; GENE DUPLICATION; GENETICS; GENOMICS; MOLECULAR EVOLUTION; MOLECULAR GENETICS; MULTIGENE FAMILY; NUCLEOTIDE SEQUENCE; PLANT; PLANT GENOME; PROTEIN DOMAIN;

ARABIDOPSIS; PYRONIA TITHONUS;

CLUSTER ANALYSIS; COMPUTATIONAL BIOLOGY; CONSERVED SEQUENCE; DISEASE RESISTANCE; EVOLUTION, MOLECULAR; GENE DUPLICATION; GENETIC LOCI; GENOME, PLANT; GENOMICS; MOLECULAR SEQUENCE ANNOTATION; MULTIGENE FAMILY; PLANT PROTEINS; PLANTS; PROTEIN INTERACTION DOMAINS AND MOTIFS; TANDEM REPEAT SEQUENCES;

EID: 84924288908     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-15-966     Document Type: Article

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