메뉴 건너뛰기




Volumn 3, Issue 4, 2000, Pages 285-290

The genetic architecture of resistance

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; DISEASE RESISTANCE; GENE CLUSTER; GENETIC CONSERVATION; INTERLEUKIN RECEPTOR; LEUCINE RICH REPEAT; NUCLEOTIDE BINDING SITE; PHYLOGENY; PLANT GENOME; RESISTANCE GENE;

EID: 0033933582     PISSN: 13695266     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1369-5266(00)00081-9     Document Type: Review
Times cited : (155)

References (45)
  • 1
    • 0033231602 scopus 로고    scopus 로고
    • Plant disease resistance genes encode members of an ancient and diverse protein family within the nucleotide binding superfamily
    • This paper is a comprehensive examination of motif organization, phylogeny and genomic evolution among NBS-LRR proteins. Descriptions of TIR- versus non-TIR-specific motifs, an extensive phylogenetic tree of NBS-LRR evolution and the distribution of NBS-LRR sequences throughout the Arabidopsis genome are especially noteworthy. The study also provides evidence that TIR-containing sequences are absent from the grasses
    • Meyers B.C., Dickermann A.W., Michelmore R.W., Sivaramakrishnan S., Sobral B.W., Young N.D. Plant disease resistance genes encode members of an ancient and diverse protein family within the nucleotide binding superfamily. Plant J. 20:1999;317-332. This paper is a comprehensive examination of motif organization, phylogeny and genomic evolution among NBS-LRR proteins. Descriptions of TIR- versus non-TIR-specific motifs, an extensive phylogenetic tree of NBS-LRR evolution and the distribution of NBS-LRR sequences throughout the Arabidopsis genome are especially noteworthy. The study also provides evidence that TIR-containing sequences are absent from the grasses.
    • (1999) Plant J , vol.20 , pp. 317-332
    • Meyers, B.C.1    Dickermann, A.W.2    Michelmore, R.W.3    Sivaramakrishnan, S.4    Sobral, B.W.5    Young, N.D.6
  • 2
    • 0343352530 scopus 로고    scopus 로고
    • Divergent evolution of plant NBS-LRR resistance gene homologues in dicot and cereal genomes
    • This paper is another comprehensive overview of plant NBS-LRR structure and phylogeny. In addition to identifying group-specific motifs and examining the apparent absence of TIR-NBS-LRR sequences in grasses, the study lays out the evidence for the presence of CC structures in the amino-terminal region of many NBS-LRR proteins
    • Pan Q., Wendel J., Fluhr R. Divergent evolution of plant NBS-LRR resistance gene homologues in dicot and cereal genomes. J Mol Evol. 50:2000;203-213. This paper is another comprehensive overview of plant NBS-LRR structure and phylogeny. In addition to identifying group-specific motifs and examining the apparent absence of TIR-NBS-LRR sequences in grasses, the study lays out the evidence for the presence of CC structures in the amino-terminal region of many NBS-LRR proteins.
    • (2000) J Mol Evol , vol.50 , pp. 203-213
    • Pan, Q.1    Wendel, J.2    Fluhr, R.3
  • 3
    • 0028152968 scopus 로고
    • Isolation of the tomato Cf-9 gene for resistance to Cladosporium fulvum by transposon tagging
    • Jones D.A., Thomas C.M., Hammond-Kosack K.E., Balint-Kurti P.J., Jones J.D.G. Isolation of the tomato Cf-9 gene for resistance to Cladosporium fulvum by transposon tagging. Science. 266:1994;789-793.
    • (1994) Science , vol.266 , pp. 789-793
    • Jones, D.A.1    Thomas, C.M.2    Hammond-Kosack, K.E.3    Balint-Kurti, P.J.4    Jones, J.D.G.5
  • 7
    • 0030476449 scopus 로고    scopus 로고
    • Plant disease resistance genes: Function meets structure
    • Bent A.F. Plant disease resistance genes: function meets structure. Plant Cell. 8:1996;1757-1771.
    • (1996) Plant Cell , vol.8 , pp. 1757-1771
    • Bent, A.F.1
  • 8
    • 0032130147 scopus 로고    scopus 로고
    • Structure and function of proteins controlling strain-specific pathogen resistance in plants
    • Ellis J., Jones D. Structure and function of proteins controlling strain-specific pathogen resistance in plants. Curr Opin Plant Biol. 1:1998;288-293.
    • (1998) Curr Opin Plant Biol , vol.1 , pp. 288-293
    • Ellis, J.1    Jones, D.2
  • 9
    • 0032130608 scopus 로고    scopus 로고
    • Resistance gene evolution
    • Ronald P.C. Resistance gene evolution. Curr Opin Plant Biol. 1:1998;294-298.
    • (1998) Curr Opin Plant Biol , vol.1 , pp. 294-298
    • Ronald, P.C.1
  • 10
    • 0030715323 scopus 로고    scopus 로고
    • Cytochrome c and dATP-dependent formation of Apaf-1/caspase-9 complex initiates an apoptotic protease cascade
    • Li P., Nijhawan D., Budihardjo I., Srinvasula S.M., Ahmad M., Alnemri E.S., Wang X. Cytochrome c and dATP-dependent formation of Apaf-1/caspase-9 complex initiates an apoptotic protease cascade. Cell. 91:1997;479-487.
    • (1997) Cell , vol.91 , pp. 479-487
    • Li, P.1    Nijhawan, D.2    Budihardjo, I.3    Srinvasula, S.M.4    Ahmad, M.5    Alnemri, E.S.6    Wang, X.7
  • 12
    • 77956742948 scopus 로고    scopus 로고
    • The role of leucine-rich repeat proteins in plant defences
    • Jones D.A., Jones J.D.G. The role of leucine-rich repeat proteins in plant defences. Adv Bot Res. 24:1997;90-167.
    • (1997) Adv Bot Res , vol.24 , pp. 90-167
    • Jones, D.A.1    Jones, J.D.G.2
  • 13
    • 0032204563 scopus 로고    scopus 로고
    • Receptor-like genes in the major resistance locus of lettuce are subject to divergent selection
    • Meyers B.C., Shen K.A., Rohani P., Gaut B.S., Michelmore R.W. Receptor-like genes in the major resistance locus of lettuce are subject to divergent selection. Plant Cell. 11:1998;1833-1846.
    • (1998) Plant Cell , vol.11 , pp. 1833-1846
    • Meyers, B.C.1    Shen, K.A.2    Rohani, P.3    Gaut, B.S.4    Michelmore, R.W.5
  • 14
    • 0033524389 scopus 로고    scopus 로고
    • Diversity and molecular evolution of the RPS2 resistance gene in Arabidopsis thaliana
    • Caicedo A.L., Schaal B.A., Kunkel B.N. Diversity and molecular evolution of the RPS2 resistance gene in Arabidopsis thaliana. Proc Natl Acad Sci USA. 96:1999;302-306.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 302-306
    • Caicedo, A.L.1    Schaal, B.A.2    Kunkel, B.N.3
  • 15
    • 0033549777 scopus 로고    scopus 로고
    • Dynamics of disease resistance polymorphism at the Rpm1 locus of Arabidopsis
    • Stahl E.A., Dwyer G., Mauricio R., Kreitman M., Bergelson J. Dynamics of disease resistance polymorphism at the Rpm1 locus of Arabidopsis. Nature. 400:1999;667-671.
    • (1999) Nature , vol.400 , pp. 667-671
    • Stahl, E.A.1    Dwyer, G.2    Mauricio, R.3    Kreitman, M.4    Bergelson, J.5
  • 16
    • 0032205839 scopus 로고    scopus 로고
    • The tomato Cf-5 disease resistance gene and six homologs show pronounced allelic variation in leucine-rich repeat copy number
    • Dixon M.S., Hatzixanthis K., Jones D.A., Harrison K., Jones J.D.G. The tomato Cf-5 disease resistance gene and six homologs show pronounced allelic variation in leucine-rich repeat copy number. Plant Cell. 10:1998;1915-1925.
    • (1998) Plant Cell , vol.10 , pp. 1915-1925
    • Dixon, M.S.1    Hatzixanthis, K.2    Jones, D.A.3    Harrison, K.4    Jones, J.D.G.5
  • 17
    • 0033101488 scopus 로고    scopus 로고
    • Identification of regions in alleles of the flax rust resistance gene L that determine differences in gene-for-gene specificity
    • This paper presents a sequence comparison of 13 alleles at the L locus of flax. Comparisons of different alleles, as well as transgenic plants with chimeric R genes, confirm the importance of the LRR domain and provide evidence that both the TIR and the LRR domains are involved in pathogen specificity
    • Ellis J.G., Lawrence G.J., Luck J.E., Dodds P.N. Identification of regions in alleles of the flax rust resistance gene L that determine differences in gene-for-gene specificity. Plant Cell. 11:1999;495-506. This paper presents a sequence comparison of 13 alleles at the L locus of flax. Comparisons of different alleles, as well as transgenic plants with chimeric R genes, confirm the importance of the LRR domain and provide evidence that both the TIR and the LRR domains are involved in pathogen specificity.
    • (1999) Plant Cell , vol.11 , pp. 495-506
    • Ellis, J.G.1    Lawrence, G.J.2    Luck, J.E.3    Dodds, P.N.4
  • 18
    • 0032170811 scopus 로고    scopus 로고
    • A mutation within the leucine-rich repeat domain of the Arabidopsis disease resistance gene RPS5 partially suppresses multiple bacterial and downy mildew resistance genes
    • Warren R.F., Henk A., Mowery P., Holub E., Innes R.W. A mutation within the leucine-rich repeat domain of the Arabidopsis disease resistance gene RPS5 partially suppresses multiple bacterial and downy mildew resistance genes. Plant Cell. 10:1998;1439-1452.
    • (1998) Plant Cell , vol.10 , pp. 1439-1452
    • Warren, R.F.1    Henk, A.2    Mowery, P.3    Holub, E.4    Innes, R.W.5
  • 22
    • 0030271515 scopus 로고    scopus 로고
    • Coiled coils: New structures and new functions
    • Lupas A. Coiled coils: new structures and new functions. Trends Biochem Sci. 21:1996;375-382.
    • (1996) Trends Biochem Sci , vol.21 , pp. 375-382
    • Lupas, A.1
  • 23
    • 0030294847 scopus 로고    scopus 로고
    • Characterization of eds1, a mutation in Arabidopsis suppressing resistance to Peronospora parasitica specified by several different RPP genes
    • Parker J.E., Holub E.B., Frost L.N., Falk A., Gunn N.D., Daniels M.J. Characterization of eds1, a mutation in Arabidopsis suppressing resistance to Peronospora parasitica specified by several different RPP genes. Plant Cell. 8:1996;2033-2046.
    • (1996) Plant Cell , vol.8 , pp. 2033-2046
    • Parker, J.E.1    Holub, E.B.2    Frost, L.N.3    Falk, A.4    Gunn, N.D.5    Daniels, M.J.6
  • 25
    • 0033020734 scopus 로고    scopus 로고
    • EDS1, an essential component of R gene-mediated disease resistance in Arabidopsis has homology to eukaryotic lipases
    • Falk A., Feyes B., Frost L.N., Jones J.D.G., Daniels M.J., Parker J.E. EDS1, an essential component of R gene-mediated disease resistance in Arabidopsis has homology to eukaryotic lipases. Proc Natl Acad Sci USA. 96:1999;3292-3297.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 3292-3297
    • Falk, A.1    Feyes, B.2    Frost, L.N.3    Jones, J.D.G.4    Daniels, M.J.5    Parker, J.E.6
  • 26
    • 0032544069 scopus 로고    scopus 로고
    • Different requirements for EDS1 and NDR1 by disease resistance genes define at least two R gene-mediated signaling pathways in Arabidopsis
    • Aarts N., Metz M., Holub E., Staskawicz B.J., Daniels M.J., Parker J.E. Different requirements for EDS1 and NDR1 by disease resistance genes define at least two R gene-mediated signaling pathways in Arabidopsis. Proc Natl Acad Sci USA. 95:1998;10306-10311.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 10306-10311
    • Aarts, N.1    Metz, M.2    Holub, E.3    Staskawicz, B.J.4    Daniels, M.J.5    Parker, J.E.6
  • 27
    • 85031584109 scopus 로고    scopus 로고
    • High evolutionary conservation of resistance gene analogs from diverse plant hosts
    • San Diego: Scherago International, Inc.
    • Goodwin, S.B. High evolutionary conservation of resistance gene analogs from diverse plant hosts. In Plant & Animal Genome VII. 1999. San Diego: Scherago International, Inc.:189.
    • (1999) In Plant & Animal Genome , vol.7 , pp. 189
    • Goodwin, S.B.1
  • 28
    • 85031588095 scopus 로고    scopus 로고
    • Comparative genetics of NBS-LRR resistance gene homologues in the genomes of two dicotyledons: Tomato and Arabidopsis
    • press
    • Pan Q., Liu Y-S., Budai-Hadrian O., Sela M., Carmel-Goren L., Zamir D., Fluhr R. Comparative genetics of NBS-LRR resistance gene homologues in the genomes of two dicotyledons: tomato and Arabidopsis. Genetics. 2000;405in press.
    • (2000) Genetics
    • Pan, Q.1    Liu, Y.-S.2    Budai-Hadrian, O.3    Sela, M.4    Carmel-Goren, L.5    Zamir, D.6    Fluhr, R.7
  • 29
    • 0006922663 scopus 로고    scopus 로고
    • Analysis, of 1.9 Mb, of contiguous sequence from chromosome 4 of Arabidopsis thaliana
    • Analysis, of 1.9 Mb, of contiguous sequence from chromosome 4 of Arabidopsis thaliana. Nature. 391:1998;485-488.
    • (1998) Nature , vol.391 , pp. 485-488
  • 30
    • 0343621499 scopus 로고    scopus 로고
    • Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana
    • One of two recent landmark studies in which the entire sequence of a plant chromosome is described. Of special interest in the context of R genes is the revelation that gene duplications and extensive gene clusters are relatively common in Arabidopsis
    • Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Nature. 402:1999;769-777. One of two recent landmark studies in which the entire sequence of a plant chromosome is described. Of special interest in the context of R genes is the revelation that gene duplications and extensive gene clusters are relatively common in Arabidopsis.
    • (1999) Nature , vol.402 , pp. 769-777
  • 31
    • 0002245090 scopus 로고    scopus 로고
    • Organization of resistance genes in Arabidopsis
    • I.R. Crute, E.B. Holub, & J.J. Burdon. Farnham, UK: CAB International
    • Holub E. Organization of resistance genes in Arabidopsis. Crute I.R., Holub E.B., Burdon J.J. The Gene-for-Gene Relationship in Plant-Parasite Interactions. 1997;5-26 CAB International, Farnham, UK.
    • (1997) The Gene-for-Gene Relationship in Plant-Parasite Interactions , pp. 5-26
    • Holub, E.1
  • 34
    • 84871345497 scopus 로고    scopus 로고
    • Carnegie Institute of Washington National Center for Genome Resources: URL
    • Carnegie Institute of Washington National Center for Genome Resources: The Arabidopsis Information Resource. URL http://www.arabidopsis.org/.
    • The Arabidopsis Information Resource
  • 35
    • 0031127301 scopus 로고    scopus 로고
    • Inactivation of the flax rust resistance gene M associated with loss of a repeated unit within the leucine-rich repeat coding region
    • Anderson P.A., Lawrence G.J., Morrish B.C., Ayliffe M.A., Finnegan E.J., Ellis J.G. Inactivation of the flax rust resistance gene M associated with loss of a repeated unit within the leucine-rich repeat coding region. Plant Cell. 9:1997;641-651.
    • (1997) Plant Cell , vol.9 , pp. 641-651
    • Anderson, P.A.1    Lawrence, G.J.2    Morrish, B.C.3    Ayliffe, M.A.4    Finnegan, E.J.5    Ellis, J.G.6
  • 37
    • 0031469143 scopus 로고    scopus 로고
    • Novel disease resistance specificities result from sequence exchange between tandemly repeated genes at the Cf-4/9 locus of tomato
    • Parniske M., Hammond-Kosack K.E., Golstein C., Thomas C.M., Jones D.A., Harrison K., Wulff B.B.H., Jones J.D.G. Novel disease resistance specificities result from sequence exchange between tandemly repeated genes at the Cf-4/9 locus of tomato. Cell. 91:1997;821-832.
    • (1997) Cell , vol.91 , pp. 821-832
    • Parniske, M.1    Hammond-Kosack, K.E.2    Golstein, C.3    Thomas, C.M.4    Jones, D.A.5    Harrison, K.6    Wulff, B.B.H.7    Jones, J.D.G.8
  • 39
    • 0032754045 scopus 로고    scopus 로고
    • The Mla (powdery mildew) resistance cluster is associated with three NBS-LRR gene families and suppressed recombination within a 240-kb DNA interval on chromosome 5S (1HS) of barley
    • The structure of the Mla gene cluster of barley is described. To examine these sequences, a complete physical map consisting of BAC and yeast artificial chromosome clones spanning more than 1 Mb is constructed and a segment with 11 NBS-LRR sequences is pinpointed. Interestingly, rates of recombination were found to be ten-fold lower in this region than in the genome at large
    • Wei F., Gobelman-Werner K., Morroll S.M., Kurth J., Mao L., Wing R., Leister D., Schulze-Lefert P., Wise R.P. The Mla (powdery mildew) resistance cluster is associated with three NBS-LRR gene families and suppressed recombination within a 240-kb DNA interval on chromosome 5S (1HS) of barley. Genetics. 153:1999;1929-1948. The structure of the Mla gene cluster of barley is described. To examine these sequences, a complete physical map consisting of BAC and yeast artificial chromosome clones spanning more than 1 Mb is constructed and a segment with 11 NBS-LRR sequences is pinpointed. Interestingly, rates of recombination were found to be ten-fold lower in this region than in the genome at large.
    • (1999) Genetics , vol.153 , pp. 1929-1948
    • Wei, F.1    Gobelman-Werner, K.2    Morroll, S.M.3    Kurth, J.4    Mao, L.5    Wing, R.6    Leister, D.7    Schulze-Lefert, P.8    Wise, R.P.9
  • 40
    • 0033083979 scopus 로고    scopus 로고
    • Homologues of the Cf-9 disease resistance gene (Hcr9s) are present at multiple loci on the short arm of tomato chromosome 1
    • Parniske M., Wulff B.B.H., Bonnema G., Thomas C.M., Jones D.A., Jones J.D.G. Homologues of the Cf-9 disease resistance gene (Hcr9s) are present at multiple loci on the short arm of tomato chromosome 1. Mol Plant Microbe Interact. 12:1999;93-102.
    • (1999) Mol Plant Microbe Interact , vol.12 , pp. 93-102
    • Parniske, M.1    Wulff, B.B.H.2    Bonnema, G.3    Thomas, C.M.4    Jones, D.A.5    Jones, J.D.G.6
  • 41
    • 0033545987 scopus 로고    scopus 로고
    • Recombination between diverged clusters of the tomato Cf-9 plant disease resistance gene family
    • This is a fascinating study of three Hcr9 clusters in tomato in which sequence analysis of family members suggests that recombination has taken place between clusters. This observation could have profound implications for the genome organization and evolution of R genes, as well as other dispersed gene families
    • Parniske M., Jones J.D.G. Recombination between diverged clusters of the tomato Cf-9 plant disease resistance gene family. Proc Natl Acad Sci USA. 96:1999;5850-5855. This is a fascinating study of three Hcr9 clusters in tomato in which sequence analysis of family members suggests that recombination has taken place between clusters. This observation could have profound implications for the genome organization and evolution of R genes, as well as other dispersed gene families.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 5850-5855
    • Parniske, M.1    Jones, J.D.G.2
  • 42
    • 0032415864 scopus 로고    scopus 로고
    • Clusters of resistance genes in plants evolve by divergent selection and a birth-and-death process
    • Michelmore R.W., Meyers B.C. Clusters of resistance genes in plants evolve by divergent selection and a birth-and-death process. Genome Res. 8:1998;1113-1130.
    • (1998) Genome Res , vol.8 , pp. 1113-1130
    • Michelmore, R.W.1    Meyers, B.C.2
  • 43
    • 0033576611 scopus 로고    scopus 로고
    • Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana
    • One of two recent landmark studies in which the entire sequence of a plant chromosome is described. Of special interest in the context of R genes is the revelation that gene duplications and extensive gene clusters are relatively common in Arabidopsis
    • Lin X., Kaul S., Rounsley S., Shea T.P., Benito M.I., Town C.D., Fujii C.Y., Mason T., Bowman C.L., Barnstead M.et al. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Nature. 402:1999;761-768. One of two recent landmark studies in which the entire sequence of a plant chromosome is described. Of special interest in the context of R genes is the revelation that gene duplications and extensive gene clusters are relatively common in Arabidopsis.
    • (1999) Nature , vol.402 , pp. 761-768
    • Lin, X.1    Kaul, S.2    Rounsley, S.3    Shea, T.P.4    Benito, M.I.5    Town, C.D.6    Fujii, C.Y.7    Mason, T.8    Bowman, C.L.9    Barnstead, M.10
  • 44
    • 0033230044 scopus 로고    scopus 로고
    • Copying out our ABCs - The role of gene redundancy in interpreting genetic hierarchies
    • Martienssen R., Irish V. Copying out our ABCs - the role of gene redundancy in interpreting genetic hierarchies. Trends Genet. 15:1999;435-437.
    • (1999) Trends Genet , vol.15 , pp. 435-437
    • Martienssen, R.1    Irish, V.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.