-
1
-
-
38649126924
-
B-class MADS-box genes in trioecious papaya: Two paleoAP3 paralogs, CpTM6-1 and CpTM6-2, and a PI ortholog CpPI
-
Ackerman, C.M., Yu, Q., Kim, S., Paull, R.E., Moore, P.H., and Ming, R. (2008). B-class MADS-box genes in trioecious papaya: Two paleoAP3 paralogs, CpTM6-1 and CpTM6-2, and a PI ortholog CpPI. Planta 227: 741-753.
-
(2008)
Planta
, vol.227
, pp. 741-753
-
-
Ackerman, C.M.1
Yu, Q.2
Kim, S.3
Paull, R.E.4
Moore, P.H.5
Ming, R.6
-
2
-
-
0030801002
-
Gapped BLAST and PSIBLAST: A new generation of protein database search programs
-
Altschul, S.F., Madden, T.L., Schäffer, A.A., Zhang, J., Zhang, Z., Miller, W., and Lipman, D.J. (1997). Gapped BLAST and PSIBLAST: A new generation of protein database search programs. Nucleic Acids Res. 25: 3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
0034649566
-
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
-
Arabidopsis Genome Initiative
-
Arabidopsis Genome Initiative (2000). Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408: 796-815.
-
(2000)
Nature
, vol.408
, pp. 796-815
-
-
-
4
-
-
0034069495
-
Gene ontology: Tool for the unification of biology
-
The Gene Ontology Consortium
-
Ashburner, M., et al.; The Gene Ontology Consortium (2000). Gene ontology: Tool for the unification of biology. Nat. Genet. 25: 25-29.
-
(2000)
Nat. Genet.
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
-
5
-
-
77949523463
-
Paleopolyploidy in the Brassicales: Analyses of the Cleome transcriptome elucidate the history of genome duplications in Arabidopsis and other Brassicales
-
Barker, M.S., Vogel, H., and Schranz, M.E. (2009). Paleopolyploidy in the Brassicales: Analyses of the Cleome transcriptome elucidate the history of genome duplications in Arabidopsis and other Brassicales. Genome Biol. Evol. 1: 391-399.
-
(2009)
Genome Biol. Evol.
, vol.1
, pp. 391-399
-
-
Barker, M.S.1
Vogel, H.2
Schranz, M.E.3
-
6
-
-
77954148565
-
Evidence for the involvement of Globosa-like gene duplications and expression divergence in the evolution of floral morphology in the Zingiberales
-
Bartlett, M.E., and Specht, C.D. (2010). Evidence for the involvement of Globosa-like gene duplications and expression divergence in the evolution of floral morphology in the Zingiberales. New Phytol. 187: 521-541.
-
(2010)
New Phytol.
, vol.187
, pp. 521-541
-
-
Bartlett, M.E.1
Specht, C.D.2
-
7
-
-
78649817356
-
Dated molecular phylogenies indicate a Miocene origin for Arabidopsis thaliana
-
Beilstein, M.A., Nagalingum, N.S., Clements, M.D., Manchester, S. R., and Mathews, S. (2010). Dated molecular phylogenies indicate a Miocene origin for Arabidopsis thaliana. Proc. Natl. Acad. Sci. USA 107: 18724-18728.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 18724-18728
-
-
Beilstein, M.A.1
Nagalingum, N.S.2
Clements, M.D.3
Manchester, S.R.4
Mathews, S.5
-
8
-
-
0037381673
-
Comparisons with Caenorhabditis (~100 Mb) and Drosophila (~175 Mb) using flow cytometry show genome size in Arabidopsis to be ~157 Mb and thus ~25% larger than the Arabidopsis genome initiative estimate of ~125 Mb
-
Bennett, M.D., Leitch, I.J., Price, H.J., and Johnston, J.S. (2003). Comparisons with Caenorhabditis (~100 Mb) and Drosophila (~175 Mb) using flow cytometry show genome size in Arabidopsis to be ~157 Mb and thus ~25% larger than the Arabidopsis genome initiative estimate of ~125 Mb. Ann. Bot. (Lond.) 91: 547-557.
-
(2003)
Ann. Bot. (Lond.)
, vol.91
, pp. 547-557
-
-
Bennett, M.D.1
Leitch, I.J.2
Price, H.J.3
Johnston, J.S.4
-
9
-
-
2442713832
-
GeneWise and Genomewise
-
Birney, E., Clamp, M., and Durbin, R. (2004). GeneWise and Genomewise. Genome Res. 14: 988-995.
-
(2004)
Genome Res.
, vol.14
, pp. 988-995
-
-
Birney, E.1
Clamp, M.2
Durbin, R.3
-
10
-
-
0037313579
-
A recent polyploidy superimposed on older large-scale duplications in the Arabidopsis genome
-
Blanc, G., Hokamp, K., and Wolfe, K.H. (2003). A recent polyploidy superimposed on older large-scale duplications in the Arabidopsis genome. Genome Res. 13: 137-144.
-
(2003)
Genome Res.
, vol.13
, pp. 137-144
-
-
Blanc, G.1
Hokamp, K.2
Wolfe, K.H.3
-
11
-
-
0037255072
-
The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003
-
Boeckmann, B., Bairoch, A., Apweiler, R., Blatter, M.C., Estreicher, A., Gasteiger, E., Martin, M.J., Michoud, K., O'Donovan, C., Phan, I., Pilbout, S., and Schneider, M. (2003). The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003. Nucleic Acids Res. 31: 365-370.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 365-370
-
-
Boeckmann, B.1
Bairoch, A.2
Apweiler, R.3
Blatter, M.C.4
Estreicher, A.5
Gasteiger, E.6
Martin, M.J.7
Michoud, K.8
O'Donovan, C.9
Phan, I.10
Pilbout, S.11
Schneider, M.12
-
12
-
-
0037468758
-
Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events
-
Bowers, J.E., Chapman, B.A., Rong, J.K., and Paterson, A.H. (2003). Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events. Nature 422: 433-438.
-
(2003)
Nature
, vol.422
, pp. 433-438
-
-
Bowers, J.E.1
Chapman, B.A.2
Rong, J.K.3
Paterson, A.H.4
-
13
-
-
0031079653
-
The self-incompatibility (S) haplotypes of Brassica contain highly divergent and rearranged sequences of ancient origin
-
Boyes, D.C., Nasrallah, M.E., Vrebalov, J., and Nasrallah, J.B. (1997). The self-incompatibility (S) haplotypes of Brassica contain highly divergent and rearranged sequences of ancient origin. Plant Cell 9: 237-247.
-
(1997)
Plant Cell
, vol.9
, pp. 237-247
-
-
Boyes, D.C.1
Nasrallah, M.E.2
Vrebalov, J.3
Nasrallah, J.B.4
-
14
-
-
18144402446
-
The future of C4 research-Maize, Flaveria or Cleome?
-
Brown, N.J., Parsley, K., and Hibberd, J.M. (2005). The future of C4 research-Maize, Flaveria or Cleome? Trends Plant Sci. 10: 215-221.
-
(2005)
Trends Plant Sci.
, vol.10
, pp. 215-221
-
-
Brown, N.J.1
Parsley, K.2
Hibberd, J.M.3
-
15
-
-
84858386933
-
Corolla monosymmetry: Evolution of a morphological novelty in the Brassicaceae family
-
Busch, A., Horn, S., Mühlhausen, A., Mummenhoff, K., and Zachgo, S. (2012). Corolla monosymmetry: Evolution of a morphological novelty in the Brassicaceae family. Mol. Biol. Evol. 29: 1241-1254.
-
(2012)
Mol. Biol. Evol.
, vol.29
, pp. 1241-1254
-
-
Busch, A.1
Horn, S.2
Mühlhausen, A.3
Mummenhoff, K.4
Zachgo, S.5
-
16
-
-
36749003783
-
Control of corolla monosymmetry in the Brassicaceae Iberis amara
-
Busch, A., and Zachgo, S. (2007). Control of corolla monosymmetry in the Brassicaceae Iberis amara. Proc. Natl. Acad. Sci. USA 104: 16714-16719.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 16714-16719
-
-
Busch, A.1
Zachgo, S.2
-
17
-
-
70549090096
-
Flower symmetry evolution: Towards understanding the abominable mystery of angiosperm radiation
-
Busch, A., and Zachgo, S. (2009). Flower symmetry evolution: Towards understanding the abominable mystery of angiosperm radiation. BioEssays 31: 1181-1190.
-
(2009)
BioEssays
, vol.31
, pp. 1181-1190
-
-
Busch, A.1
Zachgo, S.2
-
18
-
-
64149097786
-
The MIQE guidelines: Minimum information for publication of quantitative real-time PCR experiments
-
Bustin, S.A., Benes, V., Garson, J.A., Hellemans, J., Huggett, J., Kubista, M., Mueller, R., Nolan, T., Pfaffl, M.W., Shipley, G.L., Vandesompele, J., and Wittwer, C.T. (2009). The MIQE guidelines: Minimum information for publication of quantitative real-time PCR experiments. Clinical Chemistry 55: 611-622.
-
(2009)
Clinical Chemistry
, vol.55
, pp. 611-622
-
-
Bustin, S.A.1
Benes, V.2
Garson, J.A.3
Hellemans, J.4
Huggett, J.5
Kubista, M.6
Mueller, R.7
Nolan, T.8
Pfaffl, M.W.9
Shipley, G.L.10
Vandesompele, J.11
Wittwer, C.T.12
-
19
-
-
12444318023
-
Activation of hypersensitive cell death by pathogen-induced receptor-like protein kinases from Arabidopsis
-
Chen, K.G., Fan, B.F., Du, L.Q., and Chen, Z.X. (2004). Activation of hypersensitive cell death by pathogen-induced receptor-like protein kinases from Arabidopsis. Plant Mol. Biol. 56: 271-283.
-
(2004)
Plant Mol. Biol.
, vol.56
, pp. 271-283
-
-
Chen, K.G.1
Fan, B.F.2
Du, L.Q.3
Chen, Z.X.4
-
20
-
-
43349107538
-
Using RepeatMasker to identify repetitive elements in genomic sequences
-
Chen, N. (2004). Using RepeatMasker to identify repetitive elements in genomic sequences. Curr. Protoc. Bioinformatics 4:10.
-
(2004)
Curr. Protoc. Bioinformatics
, vol.4
, pp. 10
-
-
Chen, N.1
-
21
-
-
72649087073
-
A new role for the SHATTERPROOF genes during Arabidopsis gynoecium development
-
Colombo, M., Brambilla, V., Marcheselli, R., Caporali, E., Kater, M.M., and Colombo, L. (2010). A new role for the SHATTERPROOF genes during Arabidopsis gynoecium development. Dev. Biol. 337: 294-302.
-
(2010)
Dev. Biol.
, vol.337
, pp. 294-302
-
-
Colombo, M.1
Brambilla, V.2
Marcheselli, R.3
Caporali, E.4
Kater, M.M.5
Colombo, L.6
-
22
-
-
72649096546
-
Molecular phylogenetics, temporal diversification, and principles of evolution in the mustard family (Brassicaceae)
-
Couvreur, T.L.P., Franzke, A., Al-Shehbaz, I.A., Bakker, F.T., Koch, M.A., and Mummenhoff, K. (2010). Molecular phylogenetics, temporal diversification, and principles of evolution in the mustard family (Brassicaceae). Mol. Biol. Evol. 27: 55-71.
-
(2010)
Mol. Biol. Evol.
, vol.27
, pp. 55-71
-
-
Couvreur, T.L.P.1
Franzke, A.2
Al-Shehbaz, I.A.3
Bakker, F.T.4
Koch, M.A.5
Mummenhoff, K.6
-
23
-
-
0028857314
-
Embryophytes have equivalent sexual phenotypes and breeding systems: Why not a common terminology to describe them?
-
Cruden, R.W., and Lloyd, R.M. (1995). Embryophytes have equivalent sexual phenotypes and breeding systems: Why not a common terminology to describe them? Am. J. Bot. 82: 816-825.
-
(1995)
Am. J. Bot.
, vol.82
, pp. 816-825
-
-
Cruden, R.W.1
Lloyd, R.M.2
-
24
-
-
80052272774
-
The genome of the extremophile crucifer Thellungiella parvula
-
Dassanayake, M., Oh, D.-H., Haas, J.S., Hernandez, A., Hong, H., Ali, S., Yun, D.-J., Bressan, R.A., Zhu, J.-K., Bohnert, H.J., and Cheeseman, J.M. (2011). The genome of the extremophile crucifer Thellungiella parvula. Nat. Genet. 43: 913-918.
-
(2011)
Nat. Genet.
, vol.43
, pp. 913-918
-
-
Dassanayake, M.1
Oh, D.-H.2
Haas, J.S.3
Hernandez, A.4
Hong, H.5
Ali, S.6
Yun, D.-J.7
Bressan, R.A.8
Zhu, J.-K.9
Bohnert, H.J.10
Cheeseman, J.M.11
-
25
-
-
0028676052
-
A superfamily of S locus-related sequences in Arabidopsis: Diverse structures and expression patterns
-
Dwyer, K.G., Kandasamy, M.K., Mahosky, D.I., Acciai, J., Kudish, B.I., Miller, J.E., Nasrallah, M.E., and Nasrallah, J.B. (1994). A superfamily of S locus-related sequences in Arabidopsis: Diverse structures and expression patterns. Plant Cell 6: 1829-1843.
-
(1994)
Plant Cell
, vol.6
, pp. 1829-1843
-
-
Dwyer, K.G.1
Kandasamy, M.K.2
Mahosky, D.I.3
Acciai, J.4
Kudish, B.I.5
Miller, J.E.6
Nasrallah, M.E.7
Nasrallah, J.B.8
-
26
-
-
84860513986
-
PILER: Identification and classification of genomic repeats
-
Edgar, R.C., and Myers, E.W. (2005). PILER: Identification and classification of genomic repeats. Bioinformatics 21 (suppl. 1): i152-i158.
-
(2005)
Bioinformatics
, vol.21
, Issue.SUPPL. 1
-
-
Edgar, R.C.1
Myers, E.W.2
-
27
-
-
70349682921
-
Gene and genome duplications: The impact of dosage-sensitivity on the fate of nuclear genes
-
Edger, P.P., and Pires, J.C. (2009). Gene and genome duplications: The impact of dosage-sensitivity on the fate of nuclear genes. Chromosome Res. 17: 699-717.
-
(2009)
Chromosome Res.
, vol.17
, pp. 699-717
-
-
Edger, P.P.1
Pires, J.C.2
-
28
-
-
0033383487
-
Symmetry in flowers: Diversity and evolution
-
Endress, P.K. (1999). Symmetry in flowers: Diversity and evolution. Int. J. Plant Sci. 160 (S6): S3-S23.
-
(1999)
Int. J. Plant Sci.
, vol.160
-
-
Endress, P.K.1
-
29
-
-
0141630427
-
Locating sequence on FPC maps and selecting a minimal tiling path
-
Engler, F.W., Hatfield, J., Nelson, W., and Soderlund, C.A. (2003). Locating sequence on FPC maps and selecting a minimal tiling path. Genome Res. 13: 2152-2163.
-
(2003)
Genome Res.
, vol.13
, pp. 2152-2163
-
-
Engler, F.W.1
Hatfield, J.2
Nelson, W.3
Soderlund, C.A.4
-
30
-
-
67650915748
-
Gene duplication and evolutionary novelty in plants
-
Flagel, L.E., and Wendel, J.F. (2009). Gene duplication and evolutionary novelty in plants. New Phytol. 183: 557-564.
-
(2009)
New Phytol.
, vol.183
, pp. 557-564
-
-
Flagel, L.E.1
Wendel, J.F.2
-
31
-
-
79751526175
-
Cabbage family affairs: The evolutionary history of Brassicaceae
-
Franzke, A., Lysak, M.A., Al-Shehbaz, I.A., Koch, M.A., and Mummenhoff, K. (2011). Cabbage family affairs: The evolutionary history of Brassicaceae. Trends Plant Sci. 16: 108-116.
-
(2011)
Trends Plant Sci.
, vol.16
, pp. 108-116
-
-
Franzke, A.1
Lysak, M.A.2
Al-Shehbaz, I.A.3
Koch, M.A.4
Mummenhoff, K.5
-
32
-
-
80053590884
-
Evolution of the S-locus region in Arabidopsis relatives
-
Guo, Y.L., Zhao, X., Lanz, C., and Weigel, D. (2011). Evolution of the S-locus region in Arabidopsis relatives. Plant Physiol. 157: 937-946.
-
(2011)
Plant Physiol.
, vol.157
, pp. 937-946
-
-
Guo, Y.L.1
Zhao, X.2
Lanz, C.3
Weigel, D.4
-
33
-
-
0036860548
-
Phylogeny of Capparaceae and Brassicaceae based on chloroplast sequence data
-
Hall, J.C., Sytsma, K.J., and Iltis, H.H. (2002). Phylogeny of Capparaceae and Brassicaceae based on chloroplast sequence data. Am. J. Bot. 89: 1826-1842.
-
(2002)
Am. J. Bot.
, vol.89
, pp. 1826-1842
-
-
Hall, J.C.1
Sytsma, K.J.2
Iltis, H.H.3
-
34
-
-
84881028642
-
An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions
-
Haudry, A., et al. (2013). An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions. Nat. Genet. 45: 891-898.
-
(2013)
Nat. Genet.
, vol.45
, pp. 891-898
-
-
Haudry, A.1
-
35
-
-
79955468851
-
The Arabidopsis lyrata genome sequence and the basis of rapid genome size change
-
Hu, T.T., et al. (2011). The Arabidopsis lyrata genome sequence and the basis of rapid genome size change. Nat. Genet. 43: 476-481.
-
(2011)
Nat. Genet.
, vol.43
, pp. 476-481
-
-
Hu, T.T.1
-
36
-
-
58149203231
-
InterPro: The integrative protein signature database
-
DATABASE ISSUE
-
Hunter, S., et al. (2009). InterPro: The integrative protein signature database. Nucleic Acids Res. 37 (Database issue): D211-D215.
-
(2009)
Nucleic Acids Res.
, vol.37
-
-
Hunter, S.1
-
37
-
-
38149087458
-
Studies in the Cleomaceae V: A new genus and ten new combinations for the flora of North America
-
Iltis, H.H., and Cochrane, T.S. (2007). Studies in the Cleomaceae V: A new genus and ten new combinations for the flora of North America. Novon 17: 447-451.
-
(2007)
Novon
, vol.17
, pp. 447-451
-
-
Iltis, H.H.1
Cochrane, T.S.2
-
38
-
-
79955382553
-
Studies in the Cleomaceae I. On the separate recognition of Capparaceae, Cleomaceae, and Brassicaceae
-
Iltis, H.H., Hall, J.C., Cochrane, T.S., and Sytsma, K.J. (2011). Studies in the Cleomaceae I. On the separate recognition of Capparaceae, Cleomaceae, and Brassicaceae. Ann. Mo. Bot. Gard. 98: 28-36.
-
(2011)
Ann. Mo. Bot. Gard.
, vol.98
, pp. 28-36
-
-
Iltis, H.H.1
Hall, J.C.2
Cochrane, T.S.3
Sytsma, K.J.4
-
39
-
-
61849085276
-
Evolution of floral symmetry: A state of the art
-
Jabbour, F., Nadot, S., and Damerval, C. (2009). Evolution of floral symmetry: A state of the art. C. R. Biol. 332: 219-231.
-
(2009)
C. R. Biol.
, vol.332
, pp. 219-231
-
-
Jabbour, F.1
Nadot, S.2
Damerval, C.3
-
40
-
-
34848886909
-
The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla
-
French-Italian Public Consortium for Grapevine Genome Characterization
-
Jaillon, O., et al; French-Italian Public Consortium for Grapevine Genome Characterization (2007). The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Nature 449: 463-467.
-
(2007)
Nature
, vol.449
, pp. 463-467
-
-
Jaillon, O.1
-
41
-
-
79955630390
-
Ancestral polyploidy in seed plants and angiosperms
-
Jiao, Y., et al. (2011). Ancestral polyploidy in seed plants and angiosperms. Nature 473: 97-100.
-
(2011)
Nature
, vol.473
, pp. 97-100
-
-
Jiao, Y.1
-
42
-
-
0033982936
-
KEGG: Kyoto encyclopedia of genes and genomes
-
Kanehisa, M., and Goto, S. (2000). KEGG: Kyoto encyclopedia of genes and genomes. Nucleic Acids Res. 28: 27-30.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 27-30
-
-
Kanehisa, M.1
Goto, S.2
-
43
-
-
34648816680
-
The 2R hypothesis: An update
-
Kasahara, M. (2007). The 2R hypothesis: An update. Curr. Opin. Immunol. 19: 547-552.
-
(2007)
Curr. Opin. Immunol.
, vol.19
, pp. 547-552
-
-
Kasahara, M.1
-
44
-
-
0037100671
-
MAFFT: A novel method for rapid multiple sequence alignment based on fast Fourier transform
-
Katoh, K., Misawa, K., Kuma, K.I., and Miyata, T. (2002). MAFFT: A novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 30: 3059-3066.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 3059-3066
-
-
Katoh, K.1
Misawa, K.2
Kuma, K.I.3
Miyata, T.4
-
45
-
-
77950398595
-
The development of Arabidopsis as a model plant
-
Koornneef, M., and Meinke, D. (2010). The development of Arabidopsis as a model plant. Plant J. 61: 909-921.
-
(2010)
Plant J.
, vol.61
, pp. 909-921
-
-
Koornneef, M.1
Meinke, D.2
-
46
-
-
34250173782
-
Elaboration of B gene function to include the identity of novel floral organs in the lower eudicot Aquilegia
-
Kramer, E.M., Holappa, L., Gould, B., Jaramillo, M.A., Setnikov, D., and Santiago, P.M. (2007). Elaboration of B gene function to include the identity of novel floral organs in the lower eudicot Aquilegia. Plant Cell 19: 750-766.
-
(2007)
Plant Cell
, vol.19
, pp. 750-766
-
-
Kramer, E.M.1
Holappa, L.2
Gould, B.3
Jaramillo, M.A.4
Setnikov, D.5
Santiago, P.M.6
-
47
-
-
79953177468
-
Aligning short sequencing reads with Bowtie
-
Langmead, B. (2010). Aligning short sequencing reads with Bowtie. Curr. Protoc. Bioinformatics 11: 7.
-
(2010)
Curr. Protoc. Bioinformatics
, vol.11
, pp. 7
-
-
Langmead, B.1
-
48
-
-
0141519279
-
OrthoMCL: Identification of ortholog groups for eukaryotic genomes
-
Li, L., and Stoeckert, C.J., Jr., and Roos, D.S. (2003). OrthoMCL: Identification of ortholog groups for eukaryotic genomes. Genome Res. 13: 2178-2189.
-
(2003)
Genome Res.
, vol.13
, pp. 2178-2189
-
-
Li, L.1
Stoeckert Jr., C.J.2
Roos, D.S.3
-
49
-
-
75649124547
-
De novo assembly of human genomes with massively parallel short read sequencing
-
Li, R.Q., et al. (2010). De novo assembly of human genomes with massively parallel short read sequencing. Genome Res. 20: 265-272.
-
(2010)
Genome Res.
, vol.20
, pp. 265-272
-
-
Li, R.Q.1
-
50
-
-
75849155535
-
The ABC model and the diversification of floral organ identity
-
Litt, A., and Kramer, E.M. (2010). The ABC model and the diversification of floral organ identity. Semin. Cell Dev. Biol. 21: 129-137.
-
(2010)
Semin. Cell Dev. Biol.
, vol.21
, pp. 129-137
-
-
Litt, A.1
Kramer, E.M.2
-
51
-
-
0030854739
-
tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence
-
Lowe, T.M., and Eddy, S.R. (1997). tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25: 955-964.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 955-964
-
-
Lowe, T.M.1
Eddy, S.R.2
-
52
-
-
72549108753
-
Cleome spinosa (Capparaceae): Polygamodioecy and pollination by bats in urban and Caatinga areas, northeastern Brazil
-
Machado, I., Cristina Lopes, A., Valentina Leite, A., and Virgíniade Brito Neves, C. (2006). Cleome spinosa (Capparaceae): Polygamodioecy and pollination by bats in urban and Caatinga areas, northeastern Brazil. Bot. Jahrb. Syst. Pflanzengesch. Pflanzengeogr. 127: 69-82.
-
(2006)
Bot. Jahrb. Syst. Pflanzengesch. Pflanzengeogr.
, vol.127
, pp. 69-82
-
-
Machado, I.1
Cristina Lopes, A.2
Valentina Leite, A.3
Virgíniade Brito Neves, C.4
-
53
-
-
8844252293
-
TigrScan and GlimmerHMM: Two open source ab initio eukaryotic gene-finders
-
Majoros, W.H., Pertea, M., and Salzberg, S.L. (2004). TigrScan and GlimmerHMM: Two open source ab initio eukaryotic gene-finders. Bioinformatics 20: 2878-2879.
-
(2004)
Bioinformatics
, vol.20
, pp. 2878-2879
-
-
Majoros, W.H.1
Pertea, M.2
Salzberg, S.L.3
-
54
-
-
67649128640
-
A model plant for a biology curriculum: Spider flower (Cleome hasslerana L.)
-
Marquard, R.D., and Steinback, R. (2009). A model plant for a biology curriculum: Spider flower (Cleome hasslerana L.). Am. Biol. Teach. 71: 235-244.
-
(2009)
Am. Biol. Teach.
, vol.71
, pp. 235-244
-
-
Marquard, R.D.1
Steinback, R.2
-
55
-
-
34548131215
-
Cleome, a genus closely related to Arabidopsis, contains species spanning a developmental progression from C(3) to C(4) photosynthesis
-
Marshall, D.M., Muhaidat, R., Brown, N.J., Liu, Z., Stanley, S., Griffiths, H., Sage, R.F., and Hibberd, J.M. (2007). Cleome, a genus closely related to Arabidopsis, contains species spanning a developmental progression from C(3) to C(4) photosynthesis. Plant J. 51: 886-896.
-
(2007)
Plant J.
, vol.51
, pp. 886-896
-
-
Marshall, D.M.1
Muhaidat, R.2
Brown, N.J.3
Liu, Z.4
Stanley, S.5
Griffiths, H.6
Sage, R.F.7
Hibberd, J.M.8
-
56
-
-
7244257594
-
PerlPrimer: Cross-platform, graphical primer design for standard, bisulphite and real-time PCR
-
Marshall, O.J. (2004). PerlPrimer: Cross-platform, graphical primer design for standard, bisulphite and real-time PCR. Bioinformatics 20: 2471-2472.
-
(2004)
Bioinformatics
, vol.20
, pp. 2471-2472
-
-
Marshall, O.J.1
-
57
-
-
55349117154
-
Automatically extracting functionally equivalent proteins from SwissProt
-
McMillan, L.E.M., and Martin, A.C.R. (2008). Automatically extracting functionally equivalent proteins from SwissProt. BMC Bioinformatics 9: 418.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 418
-
-
McMillan, L.E.M.1
Martin, A.C.R.2
-
58
-
-
42949157236
-
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)
-
Ming, R., et al. (2008). The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus). Nature 452: 991-996.
-
(2008)
Nature
, vol.452
, pp. 991-996
-
-
Ming, R.1
-
59
-
-
61849119699
-
Why are orchid flowers so diverse? Reduction of evolutionary constraints by paralogues of class B floral homeotic genes
-
Mondragón-Palomino, M., and Theissen, G. (2009). Why are orchid flowers so diverse? Reduction of evolutionary constraints by paralogues of class B floral homeotic genes. Ann. Bot. (Lond.) 104: 583-594.
-
(2009)
Ann. Bot. (Lond.)
, vol.104
, pp. 583-594
-
-
Mondragón-Palomino, M.1
Theissen, G.2
-
60
-
-
84873174617
-
Decoding plant and animal genome plasticity from differential paleo-evolutionary patterns and processes
-
Murat, F., Van de Peer, Y., and Salse, J. (2012). Decoding plant and animal genome plasticity from differential paleo-evolutionary patterns and processes. Genome Biol. Evol. 4: 917-928.
-
(2012)
Genome Biol. Evol.
, vol.4
, pp. 917-928
-
-
Murat, F.1
Van de Peer, Y.2
Salse, J.3
-
61
-
-
8644259164
-
Natural variation in expression of selfincompatibility in Arabidopsis thaliana: Implications for the evolution of selfing
-
Nasrallah, M.E., Liu, P., Sherman-Broyles, S., Boggs, N.A., and Nasrallah, J.B. (2004). Natural variation in expression of selfincompatibility in Arabidopsis thaliana: Implications for the evolution of selfing. Proc. Natl. Acad. Sci. USA 101: 16070-16074.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 16070-16074
-
-
Nasrallah, M.E.1
Liu, P.2
Sherman-Broyles, S.3
Boggs, N.A.4
Nasrallah, J.B.5
-
63
-
-
65549111754
-
Infernal 1.0: Inference of RNA alignments
-
Nawrocki, E.P., Kolbe, D.L., and Eddy, S.R. (2009). Infernal 1.0: Inference of RNA alignments. Bioinformatics 25: 1335-1337.
-
(2009)
Bioinformatics
, vol.25
, pp. 1335-1337
-
-
Nawrocki, E.P.1
Kolbe, D.L.2
Eddy, S.R.3
-
64
-
-
58549121169
-
Assessing the gene space in draft genomes
-
Parra, G., Bradnam, K., Ning, Z., Keane, T., and Korf, I. (2009). Assessing the gene space in draft genomes. Nucleic Acids Res. 37: 289-297.
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 289-297
-
-
Parra, G.1
Bradnam, K.2
Ning, Z.3
Keane, T.4
Korf, I.5
-
65
-
-
0037045414
-
Comparison of the expression patterns of two small gene families of S gene family receptor kinase genes during the defence response in Brassica oleracea and Arabidopsis thaliana
-
Pastuglia, M., Swarup, R., Rocher, A., Saindrenan, P., Roby, D., Dumas, C., and Cock, J.M. (2002). Comparison of the expression patterns of two small gene families of S gene family receptor kinase genes during the defence response in Brassica oleracea and Arabidopsis thaliana. Gene 282: 215-225.
-
(2002)
Gene
, vol.282
, pp. 215-225
-
-
Pastuglia, M.1
Swarup, R.2
Rocher, A.3
Saindrenan, P.4
Roby, D.5
Dumas, C.6
Cock, J.M.7
-
66
-
-
79952714898
-
Comparative floral development in Cleomaceae reveals two distinct pathways leading to monosymmetry
-
Patchell, M.J., Bolton, M.C., Mankowski, P., and Hall, J.C. (2011). Comparative floral development in Cleomaceae reveals two distinct pathways leading to monosymmetry. Int. J. Plant Sci. 172: 352-365.
-
(2011)
Int. J. Plant Sci.
, vol.172
, pp. 352-365
-
-
Patchell, M.J.1
Bolton, M.C.2
Mankowski, P.3
Hall, J.C.4
-
67
-
-
84868311014
-
Parallel evolution of TCP and B-class genes in Commelinaceae flower bilateral symmetry
-
Preston, J.C., and Hileman, L.C. (2012). Parallel evolution of TCP and B-class genes in Commelinaceae flower bilateral symmetry. EvoDevo 3: 6.
-
(2012)
EvoDevo
, vol.3
, pp. 6
-
-
Preston, J.C.1
Hileman, L.C.2
-
68
-
-
84855884044
-
i-ADHoRe 3.0-Fast and sensitive detection of genomic homology in extremely large data sets
-
Proost, S., Fostier, J., De Witte, D., Dhoedt, B., Demeester, P., Van de Peer, Y., and Vandepoele, K. (2012). i-ADHoRe 3.0-Fast and sensitive detection of genomic homology in extremely large data sets. Nucleic Acids Res. 40: e11.
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Proost, S.1
Fostier, J.2
De Witte, D.3
Dhoedt, B.4
Demeester, P.5
Van de Peer, Y.6
Vandepoele, K.7
-
69
-
-
84858077472
-
The Pfam protein families database
-
DATABASE ISSUE
-
Punta, M., et al. (2012). The Pfam protein families database. Nucleic Acids Res. 40 (Database issue): D290-D301.
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Punta, M.1
-
70
-
-
34447300950
-
Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization
-
Putnam, N.H., et al. (2007). Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization. Science 317: 86-94.
-
(2007)
Science
, vol.317
, pp. 86-94
-
-
Putnam, N.H.1
-
71
-
-
84860109324
-
MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space
-
Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D.L., Darling, A., Höhna, S., Larget, B., Liu, L., Suchard, M.A., and Huelsenbeck, J.P. (2012). MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space. Syst. Biol. 61: 539-542.
-
(2012)
Syst. Biol.
, vol.61
, pp. 539-542
-
-
Ronquist, F.1
Teslenko, M.2
van der Mark, P.3
Ayres, D.L.4
Darling, A.5
Höhna, S.6
Larget, B.7
Liu, L.8
Suchard, M.A.9
Huelsenbeck, J.P.10
-
72
-
-
67649837028
-
Old dogs, new tricks: Regulatory evolution in conserved genetic modules leads to novel morphologies in plants
-
Rosin, F.M., and Kramer, E.M. (2009). Old dogs, new tricks: Regulatory evolution in conserved genetic modules leads to novel morphologies in plants. Dev. Biol. 332: 25-35.
-
(2009)
Dev. Biol.
, vol.332
, pp. 25-35
-
-
Rosin, F.M.1
Kramer, E.M.2
-
73
-
-
16244362244
-
A gene expression map of Arabidopsis thaliana development
-
Schmid, M., Davison, T.S., Henz, S.R., Pape, U.J., Demar, M., Vingron, M., Schölkopf, B., Weigel, D., and Lohmann, J.U. (2005). A gene expression map of Arabidopsis thaliana development. Nat. Genet. 37: 501-506.
-
(2005)
Nat. Genet.
, vol.37
, pp. 501-506
-
-
Schmid, M.1
Davison, T.S.2
Henz, S.R.3
Pape, U.J.4
Demar, M.5
Vingron, M.6
Schölkopf, B.7
Weigel, D.8
Lohmann, J.U.9
-
74
-
-
44949231424
-
Analyzing real-time PCR data by the comparative C(T) method
-
Schmittgen, T.D., and Livak, K.J. (2008). Analyzing real-time PCR data by the comparative C(T) method. Nat. Protoc. 3: 1101-1108.
-
(2008)
Nat. Protoc.
, vol.3
, pp. 1101-1108
-
-
Schmittgen, T.D.1
Livak, K.J.2
-
75
-
-
84868533902
-
Escape from preferential retention following repeated whole genome duplication in plants
-
Schnable, J.C., Wang, X., Pires, J.C., and Freeling, M. (2012). Escape from preferential retention following repeated whole genome duplication in plants. Front. Plant Sci. 3: 94.
-
(2012)
Front. Plant Sci.
, vol.3
, pp. 94
-
-
Schnable, J.C.1
Wang, X.2
Pires, J.C.3
Freeling, M.4
-
76
-
-
33751014556
-
The ABC's of comparative genomics in the Brassicaceae: Building blocks of crucifer genomes
-
Schranz, M.E., Lysak, M.A., and Mitchell-Olds, T. (2006). The ABC's of comparative genomics in the Brassicaceae: Building blocks of crucifer genomes. Trends Plant Sci. 11: 535-542.
-
(2006)
Trends Plant Sci.
, vol.11
, pp. 535-542
-
-
Schranz, M.E.1
Lysak, M.A.2
Mitchell-Olds, T.3
-
77
-
-
33745478966
-
Independent ancient polyploidy events in the sister families Brassicaceae and Cleomaceae
-
Schranz, M.E., and Mitchell-Olds, T. (2006). Independent ancient polyploidy events in the sister families Brassicaceae and Cleomaceae. Plant Cell 18: 1152-1165.
-
(2006)
Plant Cell
, vol.18
, pp. 1152-1165
-
-
Schranz, M.E.1
Mitchell-Olds, T.2
-
78
-
-
84859917501
-
Ancient whole genome duplications, novelty and diversification: The WGD Radiation Lag-Time Model
-
Schranz, M.E., Mohammadin, S., and Edger, P.P. (2012). Ancient whole genome duplications, novelty and diversification: The WGD Radiation Lag-Time Model. Curr. Opin. Plant Biol. 15: 147-153.
-
(2012)
Curr. Opin. Plant Biol.
, vol.15
, pp. 147-153
-
-
Schranz, M.E.1
Mohammadin, S.2
Edger, P.P.3
-
79
-
-
17644364432
-
Genetic analysis of rapeseed self-incompatibility lines reveals significant heterosis of different patterns for yield and oil content traits
-
Shen, J.X., Fu, T.D., Yang, G.S., Ma, C.Z., and Tu, J.X. (2005). Genetic analysis of rapeseed self-incompatibility lines reveals significant heterosis of different patterns for yield and oil content traits. Plant Breed. 124: 111-116.
-
(2005)
Plant Breed.
, vol.124
, pp. 111-116
-
-
Shen, J.X.1
Fu, T.D.2
Yang, G.S.3
Ma, C.Z.4
Tu, J.X.5
-
80
-
-
84879686532
-
The Capsella rubella genome and the genomic consequences of rapid mating system evolution
-
Slotte, T., et al. (2013). The Capsella rubella genome and the genomic consequences of rapid mating system evolution. Nat. Genet. 45: 831-835.
-
(2013)
Nat. Genet.
, vol.45
, pp. 831-835
-
-
Slotte, T.1
-
81
-
-
84863116642
-
Characterization of MADS-domain transcription factor complexes in Arabidopsis flower development
-
Smaczniak, C., et al. (2012). Characterization of MADS-domain transcription factor complexes in Arabidopsis flower development. Proc. Natl. Acad. Sci. USA 109: 1560-1565.
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 1560-1565
-
-
Smaczniak, C.1
-
82
-
-
0030690108
-
FPC: A system for building contigs from restriction fingerprinted clones
-
Soderlund, C., Longden, I., and Mott, R. (1997). FPC: A system for building contigs from restriction fingerprinted clones. Comput. Appl. Biosci. 13: 523-535.
-
(1997)
Comput. Appl. Biosci.
, vol.13
, pp. 523-535
-
-
Soderlund, C.1
Longden, I.2
Mott, R.3
-
83
-
-
23144444421
-
AUGUSTUS: A web server for gene prediction in eukaryotes that allows user-defined constraints
-
WEB SERVER ISSUE
-
Stanke, M., and Morgenstern, B. (2005). AUGUSTUS: A web server for gene prediction in eukaryotes that allows user-defined constraints. Nucleic Acids Res. 33 (Web Server issue): W465-W467.
-
(2005)
Nucleic Acids Res.
, vol.33
-
-
Stanke, M.1
Morgenstern, B.2
-
84
-
-
0345469665
-
Alternation of sexes and intermittent production of fruit in the spider flower (Cleome spinosa)
-
Stout, A.B. (1923). Alternation of sexes and intermittent production of fruit in the spider flower (Cleome spinosa). Am. J. Bot. 10: 57-66.
-
(1923)
Am. J. Bot.
, vol.10
, pp. 57-66
-
-
Stout, A.B.1
-
85
-
-
79955111350
-
Screening synteny blocks in pairwise genome comparisons through integer programming
-
Tang, H., Lyons, E., Pedersen, B., Schnable, J.C., Paterson, A.H., and Freeling, M. (2011). Screening synteny blocks in pairwise genome comparisons through integer programming. BMC Bioinformatics 12: 102.
-
(2011)
BMC Bioinformatics
, vol.12
, pp. 102
-
-
Tang, H.1
Lyons, E.2
Pedersen, B.3
Schnable, J.C.4
Paterson, A.H.5
Freeling, M.6
-
86
-
-
2942690149
-
The genetic, developmental, and molecular bases of fruit size and shape variation in tomato
-
Tanksley, S.D. (2004). The genetic, developmental, and molecular bases of fruit size and shape variation in tomato. Plant Cell 16 (suppl.): S181-S189.
-
(2004)
Plant Cell
, vol.16
, Issue.SUPPL.
-
-
Tanksley, S.D.1
-
87
-
-
84863693752
-
The tomato genome sequence provides insights into fleshy fruit evolution
-
Tomato Genome Consortium
-
Tomato Genome Consortium (2012). The tomato genome sequence provides insights into fleshy fruit evolution. Nature 485: 635-641.
-
(2012)
Nature
, vol.485
, pp. 635-641
-
-
-
88
-
-
0035144962
-
Development of floral organ identity: Stories from the MADS house
-
Theissen, G. (2001). Development of floral organ identity: Stories from the MADS house. Curr. Opin. Plant Biol. 4: 75-85.
-
(2001)
Curr. Opin. Plant Biol.
, vol.4
, pp. 75-85
-
-
Theissen, G.1
-
89
-
-
33745617700
-
Following tetraploidy in an Arabidopsis ancestor, genes were removed preferentially from one homeolog leaving clusters enriched in dosesensitive genes
-
Thomas, B.C., Pedersen, B., and Freeling, M. (2006). Following tetraploidy in an Arabidopsis ancestor, genes were removed preferentially from one homeolog leaving clusters enriched in dosesensitive genes. Genome Res. 16: 934-946.
-
(2006)
Genome Res.
, vol.16
, pp. 934-946
-
-
Thomas, B.C.1
Pedersen, B.2
Freeling, M.3
-
90
-
-
65449136284
-
TopHat: Discovering splice junctions with RNA-Seq
-
Trapnell, C., Pachter, L., and Salzberg, S.L. (2009). TopHat: Discovering splice junctions with RNA-Seq. Bioinformatics 25: 1105-1111.
-
(2009)
Bioinformatics
, vol.25
, pp. 1105-1111
-
-
Trapnell, C.1
Pachter, L.2
Salzberg, S.L.3
-
91
-
-
84859885816
-
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
-
Trapnell, C., Roberts, A., Goff, L., Pertea, G., Kim, D., Kelley, D.R., Pimentel, H., Salzberg, S.L., Rinn, J.L., and Pachter, L. (2012). Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks. Nat. Protoc. 7: 562-578.
-
(2012)
Nat. Protoc.
, vol.7
, pp. 562-578
-
-
Trapnell, C.1
Roberts, A.2
Goff, L.3
Pertea, G.4
Kim, D.5
Kelley, D.R.6
Pimentel, H.7
Salzberg, S.L.8
Rinn, J.L.9
Pachter, L.10
-
92
-
-
4344681536
-
Four DEF-like MADS box genes displayed distinct floral morphogenetic roles in Phalaenopsis orchid
-
Tsai, W.C., Kuoh, C.S., Chuang, M.H., Chen, W.H., and Chen, H.H. (2004). Four DEF-like MADS box genes displayed distinct floral morphogenetic roles in Phalaenopsis orchid. Plant Cell Physiol. 45: 831-844.
-
(2004)
Plant Cell Physiol.
, vol.45
, pp. 831-844
-
-
Tsai, W.C.1
Kuoh, C.S.2
Chuang, M.H.3
Chen, W.H.4
Chen, H.H.5
-
93
-
-
44449148202
-
Interactions of B-class complex proteins involved in tepal development in Phalaenopsis orchid
-
Tsai, W.C., Pan, Z.J., Hsiao, Y.Y., Jeng, M.F., Wu, T.F., Chen, W.H., and Chen, H.H. (2008). Interactions of B-class complex proteins involved in tepal development in Phalaenopsis orchid. Plant Cell Physiol. 49: 814-824.
-
(2008)
Plant Cell Physiol.
, vol.49
, pp. 814-824
-
-
Tsai, W.C.1
Pan, Z.J.2
Hsiao, Y.Y.3
Jeng, M.F.4
Wu, T.F.5
Chen, W.H.6
Chen, H.H.7
-
94
-
-
33748760611
-
The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)
-
Tuskan, G.A., et al. (2006). The genome of black cottonwood, Populus trichocarpa (Torr. & Gray). Science 313: 1596-1604.
-
(2006)
Science
, vol.313
, pp. 1596-1604
-
-
Tuskan, G.A.1
-
95
-
-
70349325524
-
The evolutionary significance of ancient genome duplications
-
Van de Peer, Y., Maere, S., and Meyer, A. (2009). The evolutionary significance of ancient genome duplications. Nat. Rev. Genet. 10: 725-732.
-
(2009)
Nat. Rev. Genet.
, vol.10
, pp. 725-732
-
-
Van de Peer, Y.1
Maere, S.2
Meyer, A.3
-
96
-
-
79953306241
-
Sequence-based physical mapping of complex genomes by whole genome profiling
-
van Oeveren, J., de Ruiter, M., Jesse, T., van der Poel, H., Tang, J.F., Yalcin, F., Janssen, A., Volpin, H., Stormo, K.E., Bogden, R., van Eijk, M.J.T., and Prins, M. (2011). Sequence-based physical mapping of complex genomes by whole genome profiling. Genome Res. 21: 618-625.
-
(2011)
Genome Res.
, vol.21
, pp. 618-625
-
-
van Oeveren, J.1
de Ruiter, M.2
Jesse, T.3
van der Poel, H.4
Tang, J.F.5
Yalcin, F.6
Janssen, A.7
Volpin, H.8
Stormo, K.E.9
Bogden, R.10
van Eijk, M.J.T.11
Prins, M.12
-
97
-
-
84869018936
-
Gamma paleohexaploidy in the stem lineage of core eudicots: Significance for MADS-box gene and species diversification
-
Vekemans, D., Proost, S., Vanneste, K., Coenen, H., Viaene, T., Ruelens, P., Maere, S., Van de Peer, Y., and Geuten, K. (2012). Gamma paleohexaploidy in the stem lineage of core eudicots: Significance for MADS-box gene and species diversification. Mol. Biol. Evol. 29: 3793-3806.
-
(2012)
Mol. Biol. Evol.
, vol.29
, pp. 3793-3806
-
-
Vekemans, D.1
Proost, S.2
Vanneste, K.3
Coenen, H.4
Viaene, T.5
Ruelens, P.6
Maere, S.7
Van de Peer, Y.8
Geuten, K.9
-
98
-
-
73349087826
-
Pistillata-Duplications as a mode for floral diversification in (Basal) asterids
-
Viaene, T., Vekemans, D., Irish, V.F., Geeraerts, A., Huysmans, S., Janssens, S., Smets, E., and Geuten, K. (2009). Pistillata-Duplications as a mode for floral diversification in (Basal) asterids. Mol. Biol. Evol. 26: 2627-2645.
-
(2009)
Mol. Biol. Evol.
, vol.26
, pp. 2627-2645
-
-
Viaene, T.1
Vekemans, D.2
Irish, V.F.3
Geeraerts, A.4
Huysmans, S.5
Janssens, S.6
Smets, E.7
Geuten, K.8
-
99
-
-
80053386792
-
The genome of the mesopolyploid crop species Brassica rapa
-
Brassica rapa Genome Sequencing Project Consortium
-
Wang, X.W., et al; Brassica rapa Genome Sequencing Project Consortium (2011). The genome of the mesopolyploid crop species Brassica rapa. Nat. Genet. 43: 1035-1039.
-
(2011)
Nat. Genet.
, vol.43
, pp. 1035-1039
-
-
Wang, X.W.1
-
100
-
-
84884687559
-
-
Accessed August 22, 2013
-
Wing, R.A., Mitchell-Olds, T., Pires, J.C., Schranz, M.E., Weigel, D., and Wright, S. (2013). Brassicales Map Alignment Project (BMAP). http://www.brassica.info/resource/sequencing/bmap.php. Accessed August 22, 2013.
-
(2013)
Brassicales Map Alignment Project (BMAP)
-
-
Wing, R.A.1
Mitchell-Olds, T.2
Pires, J.C.3
Schranz, M.E.4
Weigel, D.5
Wright, S.6
-
101
-
-
77952471880
-
Transcriptional regulation of the CRK/DUF26 group of receptor-like protein kinases by ozone and plant hormones in Arabidopsis
-
Wrzaczek, M., Brosché, M., Salojärvi, J., Kangasjärvi, S., Idänheimo, N., Mersmann, S., Robatzek, S., Karpiński, S., Karpińska, B., and Kangasjärvi, J. (2010). Transcriptional regulation of the CRK/DUF26 group of receptor-like protein kinases by ozone and plant hormones in Arabidopsis. BMC Plant Biol. 10: 95.
-
(2010)
BMC Plant Biol.
, vol.10
, pp. 95
-
-
Wrzaczek, M.1
Brosché, M.2
Salojärvi, J.3
Kangasjärvi, S.4
Idänheimo, N.5
Mersmann, S.6
Robatzek, S.7
Karpiński, S.8
Karpińska, B.9
Kangasjärvi, J.10
-
102
-
-
84864339018
-
Insights into salt tolerance from the genome of Thellungiella salsuginea
-
Wu, H.-J., et al. (2012). Insights into salt tolerance from the genome of Thellungiella salsuginea. Proc. Natl. Acad. Sci. USA 109: 12219-12224.
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 12219-12224
-
-
Wu, H.-J.1
-
103
-
-
34547592867
-
LTR_FINDER: An efficient tool for the prediction of full-length LTR retrotransposons
-
WEB SERVER ISSUE
-
Xu, Z., and Wang, H. (2007). LTR_FINDER: An efficient tool for the prediction of full-length LTR retrotransposons. Nucleic Acids Res. 35 (Web Server issue): W265-W268.
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Xu, Z.1
Wang, H.2
-
104
-
-
84879701074
-
The reference genome of the halophytic plant Eutrema salsugineum
-
Yang, R., et al. (2013). The reference genome of the halophytic plant Eutrema salsugineum. Front. Plant Sci. 4: 46.
-
(2013)
Front. Plant Sci.
, vol.4
, pp. 46
-
-
Yang, R.1
-
105
-
-
0034800374
-
InterProScan-An integration platform for the signature-recognition methods in InterPro
-
Zdobnov, E.M., and Apweiler, R. (2001). InterProScan-An integration platform for the signature-recognition methods in InterPro. Bioinformatics 17: 847-848.
-
(2001)
Bioinformatics
, vol.17
, pp. 847-848
-
-
Zdobnov, E.M.1
Apweiler, R.2
-
106
-
-
80255132105
-
Rapid copy number expansion and recent recruitment of domains in S-receptor kinase-like genes contribute to the origin of self-incompatibility
-
Zhang, X., Wang, L., Yuan, Y., Tian, D., and Yang, S. (2011). Rapid copy number expansion and recent recruitment of domains in S-receptor kinase-like genes contribute to the origin of self-incompatibility. FEBS J. 278: 4323-4337.
-
(2011)
FEBS J.
, vol.278
, pp. 4323-4337
-
-
Zhang, X.1
Wang, L.2
Yuan, Y.3
Tian, D.4
Yang, S.5
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