-
1
-
-
0037468758
-
Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events
-
Bowers JE, Chapman BA, Rong J, Paterson AH (2003) Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events. Nature 422:433-438.
-
(2003)
Nature
, vol.422
, pp. 433-438
-
-
Bowers, J.E.1
Chapman, B.A.2
Rong, J.3
Paterson, A.H.4
-
2
-
-
17244368487
-
Modeling gene and genome duplicationsin eukaryotes
-
MaereS,et al. (2005) Modeling gene and genome duplicationsin eukaryotes. Proc Natl Acad Sci USA 102:5454-5459.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 5454-5459
-
-
MaereS1
-
3
-
-
0034671866
-
The origins of genomic duplications in Arabidopsis
-
Vision TJ, Brown DG, Tanksley SD (2000) The origins of genomic duplications in Arabidopsis. Science 290:2114-2117.
-
(2000)
Science
, vol.290
, pp. 2114-2117
-
-
Vision, T.J.1
Brown, D.G.2
Tanksley, S.D.3
-
4
-
-
0037109058
-
The hidden duplication past of Arabidopsis thaliana
-
Simillion C, et al. (2002) The hidden duplication past of Arabidopsis thaliana. Proc Natl Acad Sci USA 99:13627-13632.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 13627-13632
-
-
Simillion, C.1
-
5
-
-
34848886909
-
The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla
-
Jaillon O, et al. (2007) The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Nature 449:463-467.
-
(2007)
Nature
, vol.449
, pp. 463-467
-
-
Jaillon, O.1
-
6
-
-
57149102681
-
Unraveling ancient hexaploidy through multiply-aligned angiosperm gene maps
-
Tang H, et al. (2008) Unraveling ancient hexaploidy through multiply-aligned angiosperm gene maps. Genome Res 18:1944-1954.
-
(2008)
Genome Res
, vol.18
, pp. 1944-1954
-
-
Tang, H.1
-
7
-
-
33748760611
-
The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)
-
Tuskan GA, et al. (2006) The genome of black cottonwood, Populus trichocarpa (Torr. & Gray). Science 313:1596-1604.
-
(2006)
Science
, vol.313
, pp. 1596-1604
-
-
Tuskan, G.A.1
-
8
-
-
33845189714
-
Legume genome evolution viewed through the Medicago truncatula and Lotus japonicus genomes
-
Cannon SB, et al. (2006) Legume genome evolution viewed through the Medicago truncatula and Lotus japonicus genomes. Proc Natl Acad Sci USA 103:18026.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 18026
-
-
Cannon, S.B.1
-
9
-
-
56149088569
-
Genome structure of the legume, Lotus japonicus
-
Sato S, et al. (2008) Genome structure of the legume, Lotus japonicus. DNA Res 15:227-239.
-
(2008)
DNA Res
, vol.15
, pp. 227-239
-
-
Sato, S.1
-
10
-
-
3042836334
-
Ancient polyploidization predating divergence of the cereals, and its consequences for comparative genomics
-
Paterson AH, Bowers JE, Chapman BA (2004) Ancient polyploidization predating divergence of the cereals, and its consequences for comparative genomics. Proc Natl Acad Sci USA 101:9903-9908.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 9903-9908
-
-
Paterson, A.H.1
Bowers, J.E.2
Chapman, B.A.3
-
13
-
-
3142700743
-
Widespread paleopolyploidy in model plant species inferred from age distributions of duplicate genes
-
Blanc G, Wolfe KH (2004) Widespread paleopolyploidy in model plant species inferred from age distributions of duplicate genes. Plant Cell 16:1667-1678.
-
(2004)
Plant Cell
, vol.16
, pp. 1667-1678
-
-
Blanc, G.1
Wolfe, K.H.2
-
14
-
-
33744822985
-
Widespread genome duplications throughout the history of flowering plants
-
Cui L, et al. (2006) Widespread genome duplications throughout the history of flowering plants. Genome Res 16:738-749.
-
(2006)
Genome Res
, vol.16
, pp. 738-749
-
-
Cui, L.1
-
15
-
-
54149092976
-
Multiple paleopolyploidizations during the evolution of the Compositae reveal parallel patternsof duplicate gene retention after millionsof years
-
Barker MS, et al. (2008) Multiple paleopolyploidizations during the evolution of the Compositae reveal parallel patternsof duplicate gene retention after millionsof years. Mol Biol Evol 25:2445-2455.
-
(2008)
Mol Biol Evol
, vol.25
, pp. 2445-2455
-
-
Barker, M.S.1
-
16
-
-
2442712340
-
Mining EST databasestoresolve evolutionary events inmajor crop species
-
Schlueter JA, etal. (2004) Mining EST databasestoresolve evolutionary events inmajor crop species. Genome 47:868-876.
-
(2004)
Genome
, vol.47
, pp. 868-876
-
-
Schlueter, J.A.1
-
17
-
-
0034634395
-
The evolutionary fate and consequencesof duplicate genes
-
ConeryJS
-
Lynch M, ConeryJS(2000) The evolutionary fate and consequencesof duplicate genes. Science 290:1151-1155.
-
(2000)
Science
, vol.290
, pp. 1151-1155
-
-
Lynch, M.1
-
18
-
-
41249098773
-
Insights into the Musagenome: Syntenic relationshipstorice and between Musa species
-
LescotM,et al. (2008) Insights into the Musagenome: Syntenic relationshipstorice and between Musa species. BMC Genomics 9:58.
-
(2008)
BMC Genomics
, vol.9
, pp. 58
-
-
LescotM1
-
19
-
-
34548202141
-
Anancient genome duplication contributedtothe abundance of metabolic genes in the moss Physcomitrella patens
-
Rensing SA,et al. (2007) Anancient genome duplication contributedtothe abundance of metabolic genes in the moss Physcomitrella patens. BMC Evol Biol 7:130.
-
(2007)
BMC Evol Biol
, vol.7
, pp. 130
-
-
Rensing, S.A.1
-
20
-
-
0035103260
-
Performance of a divergence time estimation method under a probabilistic model of rate evolution
-
Kishino H, Thorne JL, Bruno WJ (2001) Performance of a divergence time estimation method under a probabilistic model of rate evolution. Mol Biol Evol 18:352-361.
-
(2001)
Mol Biol Evol
, vol.18
, pp. 352-361
-
-
Kishino, H.1
Thorne, J.L.2
Bruno, W.J.3
-
21
-
-
34548556039
-
Inferring speciation times under an episodic molecular clock
-
Rannala B, Yang Z (2007) Inferring speciation times under an episodic molecular clock. Syst Biol 56:453-466.
-
(2007)
Syst Biol
, vol.56
, pp. 453-466
-
-
Rannala, B.1
Yang, Z.2
-
22
-
-
0036135468
-
Estimating absolute rates of molecular evolution and divergence times: A penalized likelihood approach
-
Sanderson MJ (2002) Estimating absolute rates of molecular evolution and divergence times: A penalized likelihood approach. Mol Biol Evol 19:101-109.
-
(2002)
Mol Biol Evol
, vol.19
, pp. 101-109
-
-
Sanderson, M.J.1
-
23
-
-
0035823864
-
Evolutionof the angiosperms: Calibrating the family tree
-
Wikström N,SavolainenV,Chase MW (2001) Evolutionof the angiosperms: Calibrating the family tree. Proc Biol Sci 268:2211-2220.
-
(2001)
Proc Biol Sci
, vol.268
, pp. 2211-2220
-
-
Wikström, N.1
Savolainen, V.2
Chase, M.W.3
-
24
-
-
1842431898
-
Ferns diversified in the shadow of angiosperms
-
Schneider H, et al. (2004) Ferns diversified in the shadow of angiosperms. Nature 428:553-557.
-
(2004)
Nature
, vol.428
, pp. 553-557
-
-
Schneider, H.1
-
25
-
-
2442517979
-
Dating the monocot-dicot divergence and the origin of core eudicots using whole chloroplast genomes
-
Chaw S-M, Chang C-C, Chen H-L, Li W-H (2004) Dating the monocot-dicot divergence and the origin of core eudicots using whole chloroplast genomes. J Mol Evol 58:424-441.
-
(2004)
J Mol Evol
, vol.58
, pp. 424-441
-
-
Chaw, S.-M.1
Chang, C.-C.2
Chen, H.-L.3
Li, W.-H.4
-
26
-
-
42549120705
-
Synteny and collinearity in plant genomes
-
Tang H, et al. (2008) Synteny and collinearity in plant genomes. Science 320:486-488.
-
(2008)
Science
, vol.320
, pp. 486-488
-
-
Tang, H.1
-
27
-
-
0035941023
-
Indication of global deforestation at the Cretaceous- Tertiary boundary by New Zealand fern spike
-
Vajda V, Raine JI, Hollis CJ (2001) Indication of global deforestation at the Cretaceous- Tertiary boundary by New Zealand fern spike. Science 294:1700-1702.
-
(2001)
Science
, vol.294
, pp. 1700-1702
-
-
Vajda, V.1
Raine, J.I.2
Hollis, C.J.3
-
28
-
-
4344698565
-
Land plant extinction at the end of the Cretaceous: A quantitative analysisofthe North Dakota megafloral record
-
Wilf P, Johnson KR (2004) Land plant extinction at the end of the Cretaceous: A quantitative analysisofthe North Dakota megafloral record. Paleobiology 30:347-368.
-
(2004)
Paleobiology
, vol.30
, pp. 347-368
-
-
Wilf, P.1
Johnson, K.R.2
-
29
-
-
1542377435
-
Fungal proliferation at the Cretaceous-Tertiary boundary
-
Vajda V, McLoughlin S (2004) Fungal proliferation at the Cretaceous-Tertiary boundary. Science 303:1489.
-
(2004)
Science
, vol.303
, pp. 1489
-
-
Vajda, V.1
McLoughlin, S.2
-
30
-
-
35248845528
-
Mass extinction events and the plant fossil record
-
McElwain JC, Punyasena SW (2007) Mass extinction events and the plant fossil record. Trends Ecol Evol 22:548-557.
-
(2007)
Trends Ecol Evol
, vol.22
, pp. 548-557
-
-
McElwain, J.C.1
Punyasena, S.W.2
-
31
-
-
33646572856
-
What is the role of genome duplication in the evolution of complexity and diversity?
-
Crow KD, Wagner GP (2006) What is the role of genome duplication in the evolution of complexity and diversity? Mol Biol Evol 23:887-892.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 887-892
-
-
Crow, K.D.1
Wagner, G.P.2
-
32
-
-
0034500239
-
Polyploid incidence and evolution
-
Otto SP, Whitton J (2000) Polyploid incidence and evolution. Annu Rev Genet 34:401-437.
-
(2000)
Annu Rev Genet
, vol.34
, pp. 401-437
-
-
Otto, S.P.1
Whitton, J.2
-
33
-
-
33644681986
-
The advantages and disadvantages of being polyploid
-
Comai L (2005) The advantages and disadvantages of being polyploid. Nat Rev Genet 6:836-846.
-
(2005)
Nat Rev Genet
, vol.6
, pp. 836-846
-
-
Comai, L.1
-
34
-
-
10944230777
-
Duplication and divergence: The evolution of new genes and old ideas
-
Taylor JS, Raes J (2004) Duplication and divergence: The evolution of new genes and old ideas. Annu Rev Genet 38:615-643.
-
(2004)
Annu Rev Genet
, vol.38
, pp. 615-643
-
-
Taylor, J.S.1
Raes, J.2
-
35
-
-
0021057690
-
Polyploidy and novelty in flowering plants
-
Levin DA (1983) Polyploidy and novelty in flowering plants. Am Nat 122:1-25.
-
(1983)
Am Nat
, vol.122
, pp. 1-25
-
-
Levin, D.A.1
-
36
-
-
0027059929
-
The evolutionary dynamics of polyploid plants- Origins, establishment and persistence
-
Thompson JD, Lumaret R (1992) The evolutionary dynamics of polyploid plants- Origins, establishment and persistence. Trends Ecol Evol 7:302-307.
-
(1992)
Trends Ecol Evol
, vol.7
, pp. 302-307
-
-
Thompson, J.D.1
Lumaret, R.2
-
37
-
-
24644457076
-
Novel patterns of gene expression in polyploid plants
-
Adams KL, Wendel JF (2005) Novel patterns of gene expression in polyploid plants. Trends Genet 21:539-543.
-
(2005)
Trends Genet
, vol.21
, pp. 539-543
-
-
Adams, K.L.1
Wendel, J.F.2
-
38
-
-
49649120162
-
Changes togene expression associated with hybrid speciation in plants: Further insights from transcriptomic studies in Senecio
-
Hegarty MJ, etal. (2008) Changes togene expression associated with hybrid speciation in plants: Further insights from transcriptomic studies in Senecio. Philos Trans R Soc London Ser B 363:3055-3069.
-
(2008)
Philos Trans R Soc London Ser B
, vol.363
, pp. 3055-3069
-
-
Hegarty, M.J.1
-
39
-
-
33846115537
-
Hybridization and the colonization of novel habitats by annual sunflowers
-
Rieseberg LH, et al. (2007) Hybridization and the colonization of novel habitats by annual sunflowers. Genetica 129:149-165.
-
(2007)
Genetica
, vol.129
, pp. 149-165
-
-
Rieseberg, L.H.1
-
40
-
-
0042178293
-
Major ecological transitions inwild sunflowers facilitated by hybridization
-
Rieseberg LH, etal. (2003) Major ecological transitions inwild sunflowers facilitated by hybridization. Science 301:1211-1216.
-
(2003)
Science
, vol.301
, pp. 1211-1216
-
-
Rieseberg, L.H.1
-
41
-
-
34848855463
-
Expression partitioning between genes duplicated by polyploidy under abiotic stress and during organ development
-
Liu Z, Adams KL (2007) Expression partitioning between genes duplicated by polyploidy under abiotic stress and during organ development. Curr Biol 17:1669-1674.
-
(2007)
Curr Biol
, vol.17
, pp. 1669-1674
-
-
Liu, Z.1
Adams, K.L.2
-
42
-
-
0032893932
-
Preservationof duplicate genesby complementary, degenerative mutations
-
Force A, et al. (1999) Preservationof duplicate genesby complementary, degenerative mutations. Genetics 151:1531-1545.
-
(1999)
Genetics
, vol.151
, pp. 1531-1545
-
-
Force, A.1
-
43
-
-
2942653309
-
Understanding apomixis: Recent advances and remaining conundrums
-
Bicknell RA, Koltunow AM (2004) Understanding apomixis: Recent advances and remaining conundrums. Plant Cell 16:S228-S245.
-
(2004)
Plant Cell
, vol.16
-
-
Bicknell, R.A.1
Koltunow, A.M.2
-
44
-
-
35548966719
-
Polyploidy: Doubling upfor evolutionary success
-
HegartyM, HiscockS (2007) Polyploidy: Doubling upfor evolutionary success. Curr Biol 17:R927-R929.
-
(2007)
Curr Biol
, vol.17
-
-
Hegarty, M.1
Hiscock, S.2
-
45
-
-
0347352345
-
Polyploidy in arctic plants
-
Brochmann C, et al. (2004) Polyploidy in arctic plants. Biol J Linn Soc 82:521-536.
-
(2004)
Biol J Linn Soc
, vol.82
, pp. 521-536
-
-
Brochmann, C.1
-
46
-
-
65249092204
-
-
Lowe AJ, Abbott RJ (2003) A new British species, Senecio eboracensis (Asteraceae), another hybrid derivative of S. vulgaris L. and S. squalidus L. Watsonia 24:375-388.
-
Lowe AJ, Abbott RJ (2003) A new British species, Senecio eboracensis (Asteraceae), another hybrid derivative of S. vulgaris L. and S. squalidus L. Watsonia 24:375-388.
-
-
-
-
47
-
-
0034691125
-
Hybridization as a stimulus for the evolution of invasiveness in plants?
-
Ellstrand NC, Schierenbeck KA (2000) Hybridization as a stimulus for the evolution of invasiveness in plants? Proc Natl Acad Sci USA 97:7043-7050.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 7043-7050
-
-
Ellstrand, N.C.1
Schierenbeck, K.A.2
-
48
-
-
33745562903
-
Polyploidyin invasive plant speciesof Singapore
-
Pandit MK, Tan HTW, Bisht MS (2006) Polyploidyin invasive plant speciesof Singapore. Bot J Linn Soc 151:395-403.
-
(2006)
Bot J Linn Soc
, vol.151
, pp. 395-403
-
-
Pandit, M.K.1
Tan, H.T.W.2
Bisht, M.S.3
-
49
-
-
0347388384
-
Advances in the study of polyploidy since plant speciation
-
Soltis DE, Soltis PS, Tate JA (2003) Advances in the study of polyploidy since plant speciation. New Phytol 161:173-191.
-
(2003)
New Phytol
, vol.161
, pp. 173-191
-
-
Soltis, D.E.1
Soltis, P.S.2
Tate, J.A.3
-
50
-
-
44649196460
-
Adaptive evolution in invasive species
-
Prentis PJ, et al. (2008) Adaptive evolution in invasive species. Trends Plants Sci 13:288-294.
-
(2008)
Trends Plants Sci
, vol.13
, pp. 288-294
-
-
Prentis, P.J.1
-
51
-
-
1642404383
-
Chicxulub impact predates the K-T boundary mass extinction
-
KellerG,et al. (2004) Chicxulub impact predates the K-T boundary mass extinction. Proc Natl Acad Sci USA 101:3753-3758.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 3753-3758
-
-
KellerG1
-
52
-
-
35548954250
-
The evolutionary consequences of polyploidy
-
Otto SP (2007) The evolutionary consequences of polyploidy. Cell 131:452-462.
-
(2007)
Cell
, vol.131
, pp. 452-462
-
-
Otto, S.P.1
-
53
-
-
0001654063
-
Sources of error and confidence intervals in estimating the age of angiosperms from rbcL and 18S rDNA data
-
Sanderson MJ, Doyle JA (2001) Sources of error and confidence intervals in estimating the age of angiosperms from rbcL and 18S rDNA data. Am J Bot 88:1499-1516.
-
(2001)
Am J Bot
, vol.88
, pp. 1499-1516
-
-
Sanderson, M.J.1
Doyle, J.A.2
-
54
-
-
21244483590
-
EST data suggest that poplar is an ancient polyploid
-
Sterck L, et al. (2005) EST data suggest that poplar is an ancient polyploid. New Phytol 167:165-170.
-
(2005)
New Phytol
, vol.167
, pp. 165-170
-
-
Sterck, L.1
|