메뉴 건너뛰기




Volumn 98, Issue , 2015, Pages 1-9

Development and in silico analysis of a new nitrogen-limited feeding strategy for fed-batch cultures of Pichia pastoris based on a simple pH-control system

Author keywords

Control; Fed batch culture; Fermentation; Metabolic model; Nitrogen limitation; Protein

Indexed keywords

AMMONIA; AMMONIUM HYDROXIDE; BATCH CELL CULTURE; CONTROL ENGINEERING; CONTROL SYSTEMS; FERMENTATION; METABOLISM; NITROGEN; OXYGEN; PROTEINS; YEAST;

EID: 84922979722     PISSN: 1369703X     EISSN: 1873295X     Source Type: Journal    
DOI: 10.1016/j.bej.2015.02.016     Document Type: Article
Times cited : (13)

References (34)
  • 1
    • 84859829953 scopus 로고    scopus 로고
    • Bioprocess engineering aspects of heterologous protein production in Pichia pastoris: a review
    • Potvin G., Ahmad A., Zhang Z. Bioprocess engineering aspects of heterologous protein production in Pichia pastoris: a review. Biochem. Eng. J. 2012, 64:91-105.
    • (2012) Biochem. Eng. J. , vol.64 , pp. 91-105
    • Potvin, G.1    Ahmad, A.2    Zhang, Z.3
  • 2
    • 70349897510 scopus 로고    scopus 로고
    • Fed-batch methanol feeding strategy for recombinant protein production by Pichia pastoris in the presence of co-substrate sorbitol
    • Celik E., Calik P., Oliver S.G. Fed-batch methanol feeding strategy for recombinant protein production by Pichia pastoris in the presence of co-substrate sorbitol. Yeast 2009, 26:473-484.
    • (2009) Yeast , vol.26 , pp. 473-484
    • Celik, E.1    Calik, P.2    Oliver, S.G.3
  • 3
    • 75149145634 scopus 로고    scopus 로고
    • Fermentation and oxygen transfer characteristics in recombinant human growth hormone production by Pichia pastoris in sorbitol batch and methanol fed-batch operation
    • Calik P., Inankur B., Soyaslan E.S., Sahin M., Taspinar H., Acik E., Bayraktar E. Fermentation and oxygen transfer characteristics in recombinant human growth hormone production by Pichia pastoris in sorbitol batch and methanol fed-batch operation. J. Chem. Technol. Biotechnol. 2010, 85:226-233.
    • (2010) J. Chem. Technol. Biotechnol. , vol.85 , pp. 226-233
    • Calik, P.1    Inankur, B.2    Soyaslan, E.S.3    Sahin, M.4    Taspinar, H.5    Acik, E.6    Bayraktar, E.7
  • 4
    • 77954743150 scopus 로고    scopus 로고
    • Genome-scale metabolic model of methylotrophic yeast Pichia pastoris and its use for in silioc analysis of heterologous protein production
    • Sohn S.B., Graf A.B., Kim T.Y., Gasser B., Maurer M., Ferrer P., Mattanovich D., Lee S.Y. Genome-scale metabolic model of methylotrophic yeast Pichia pastoris and its use for in silioc analysis of heterologous protein production. Biotechnol. J. 2010, 5:705-715.
    • (2010) Biotechnol. J. , vol.5 , pp. 705-715
    • Sohn, S.B.1    Graf, A.B.2    Kim, T.Y.3    Gasser, B.4    Maurer, M.5    Ferrer, P.6    Mattanovich, D.7    Lee, S.Y.8
  • 5
    • 84859199206 scopus 로고    scopus 로고
    • Genome-scale metabolic reconstructions of Pichia stipitis and Pichia pastoris and in silico evaluation of their potentials
    • Caspeta L., Shoaie S., Agren R., Nookaew I., Nielsen J. Genome-scale metabolic reconstructions of Pichia stipitis and Pichia pastoris and in silico evaluation of their potentials. BMC Syst. Biol. 2012, 6:24.
    • (2012) BMC Syst. Biol. , vol.6 , pp. 24
    • Caspeta, L.1    Shoaie, S.2    Agren, R.3    Nookaew, I.4    Nielsen, J.5
  • 6
    • 12344291874 scopus 로고    scopus 로고
    • Adaptive dissolved oxygen control through the glycerol feeding in a recombinant Pichia pastoris cultivation in conditions of oxygen transfer limitation
    • Oliveira R., Clemente J., Cunha A., Carrondo M. Adaptive dissolved oxygen control through the glycerol feeding in a recombinant Pichia pastoris cultivation in conditions of oxygen transfer limitation. J. Biotechnol. 2005, 116:35-50.
    • (2005) J. Biotechnol. , vol.116 , pp. 35-50
    • Oliveira, R.1    Clemente, J.2    Cunha, A.3    Carrondo, M.4
  • 8
    • 2242472075 scopus 로고    scopus 로고
    • Design of methanol feed control in Pichia pastoris fermentations based upon a growth model
    • Zhang W., Smith L.A., Plantz B.A., Schlegel V.L., Meagher M.M. Design of methanol feed control in Pichia pastoris fermentations based upon a growth model. Biotechnol. Prog. 2002, 18:1392-1399.
    • (2002) Biotechnol. Prog. , vol.18 , pp. 1392-1399
    • Zhang, W.1    Smith, L.A.2    Plantz, B.A.3    Schlegel, V.L.4    Meagher, M.M.5
  • 9
    • 33646042890 scopus 로고    scopus 로고
    • Impact of methanol concentration on secreted protein production in oxygen-limited cultures of recombinant Pichia pastoris
    • Khatri N.K., Hoffmann F. Impact of methanol concentration on secreted protein production in oxygen-limited cultures of recombinant Pichia pastoris. Biotechnol. Bioeng. 2006, 93:871-879.
    • (2006) Biotechnol. Bioeng. , vol.93 , pp. 871-879
    • Khatri, N.K.1    Hoffmann, F.2
  • 10
    • 2942627936 scopus 로고    scopus 로고
    • Temperature limited fed-batch technique for control of proteolysis in Pichia pastoris bioreactor cultures
    • Jahic M., Wallberg F., Bollok M., Garcia P., Enfors S.O. Temperature limited fed-batch technique for control of proteolysis in Pichia pastoris bioreactor cultures. Microb. Cell Fact. 2003, 2:6.
    • (2003) Microb. Cell Fact. , vol.2 , pp. 6
    • Jahic, M.1    Wallberg, F.2    Bollok, M.3    Garcia, P.4    Enfors, S.O.5
  • 11
    • 84867298270 scopus 로고    scopus 로고
    • Real-time monitoring and control of microbial bioprocesses with focus on the specific growth rate: current state and perspectives
    • Schuler M.M., Marison I.W. Real-time monitoring and control of microbial bioprocesses with focus on the specific growth rate: current state and perspectives. Appl. Microbiol. Biotechnol. 2012, 94:1469-1482.
    • (2012) Appl. Microbiol. Biotechnol. , vol.94 , pp. 1469-1482
    • Schuler, M.M.1    Marison, I.W.2
  • 12
    • 84856302972 scopus 로고    scopus 로고
    • Investigation of the potential of biocalorimetry as a process analytical technology (PAT) tool for monitoring and control of Crabtree-negative yeast cultures
    • Schuler M.M., Sivaprakasam S., Freeland B., Hama A., Hughes K.M., Marison I.W. Investigation of the potential of biocalorimetry as a process analytical technology (PAT) tool for monitoring and control of Crabtree-negative yeast cultures. Appl. Microbiol. Biotechnol. 2012, 93:575-584.
    • (2012) Appl. Microbiol. Biotechnol. , vol.93 , pp. 575-584
    • Schuler, M.M.1    Sivaprakasam, S.2    Freeland, B.3    Hama, A.4    Hughes, K.M.5    Marison, I.W.6
  • 13
    • 0242492884 scopus 로고    scopus 로고
    • The concept of multiple- nutrient- limited growth of microorganisms and its application in biotechnological processes
    • Egli T., Zinn M. The concept of multiple- nutrient- limited growth of microorganisms and its application in biotechnological processes. Biotechnol. Adv. 2003, 22:35-43.
    • (2003) Biotechnol. Adv. , vol.22 , pp. 35-43
    • Egli, T.1    Zinn, M.2
  • 14
    • 0018791127 scopus 로고
    • Effect of metabolic conditions on protein turnover in yeast
    • López S., Gancedo J.M. Effect of metabolic conditions on protein turnover in yeast. Biochem. J. 1979, 178:769-776.
    • (1979) Biochem. J. , vol.178 , pp. 769-776
    • López, S.1    Gancedo, J.M.2
  • 15
    • 4544388687 scopus 로고    scopus 로고
    • Dual nutrient limited growth: models, experimental observations, and applications
    • Zinn M., Witholt B., Egli T. Dual nutrient limited growth: models, experimental observations, and applications. J. Biotechnol. 2004, 113:263-279.
    • (2004) J. Biotechnol. , vol.113 , pp. 263-279
    • Zinn, M.1    Witholt, B.2    Egli, T.3
  • 16
    • 0035161939 scopus 로고    scopus 로고
    • Reserve carbohydrates metabolism in the yeast Saccharomyces cerevisiae
    • Francois J., Parrou J.L. Reserve carbohydrates metabolism in the yeast Saccharomyces cerevisiae. FEMS. Microbiol. Rev. 2001, 25:125-145.
    • (2001) FEMS. Microbiol. Rev. , vol.25 , pp. 125-145
    • Francois, J.1    Parrou, J.L.2
  • 17
    • 4344610570 scopus 로고    scopus 로고
    • Role of reserve carbohydrates in the growth dynamics of Saccharomyces cerevisiae
    • Guillou V., Plourde Owobi L., Parrou J.L., Goma G., François J. Role of reserve carbohydrates in the growth dynamics of Saccharomyces cerevisiae. FEMS Yeast Res. 2004, 4:773-787.
    • (2004) FEMS Yeast Res. , vol.4 , pp. 773-787
    • Guillou, V.1    Plourde Owobi, L.2    Parrou, J.L.3    Goma, G.4    François, J.5
  • 18
    • 0030039695 scopus 로고    scopus 로고
    • Influence of nitrogen and iron limitations on lipid production by Cryptococcus curvatus grown in batch and fed-batch culture
    • Hassan M., Blanc P.J., Granger L.M., Pareilleux A., Goma G. Influence of nitrogen and iron limitations on lipid production by Cryptococcus curvatus grown in batch and fed-batch culture. Process Biochem. 1996, 31:355-361.
    • (1996) Process Biochem. , vol.31 , pp. 355-361
    • Hassan, M.1    Blanc, P.J.2    Granger, L.M.3    Pareilleux, A.4    Goma, G.5
  • 19
    • 0035733887 scopus 로고    scopus 로고
    • Functional genomic analysis of a commercial wine strain of Saccharomyces cerevisiae under differing nitrogen conditions
    • Backhus L.E., DeRisi J., Brown P.O., Bisson L.F. Functional genomic analysis of a commercial wine strain of Saccharomyces cerevisiae under differing nitrogen conditions. FEMS Yeast Res. 2001, 1:111-125.
    • (2001) FEMS Yeast Res. , vol.1 , pp. 111-125
    • Backhus, L.E.1    DeRisi, J.2    Brown, P.O.3    Bisson, L.F.4
  • 20
    • 84861146146 scopus 로고    scopus 로고
    • Enhanced rhamnolipids production by Pseudomonas aeruginosa based on a pH stage-controlled fed-batch fermentation process
    • Zhu L., Yang X., Xue C., Chen Y., Qu L., Lu W. Enhanced rhamnolipids production by Pseudomonas aeruginosa based on a pH stage-controlled fed-batch fermentation process. Bioresour. Technol. 2012, 117:208-213.
    • (2012) Bioresour. Technol. , vol.117 , pp. 208-213
    • Zhu, L.1    Yang, X.2    Xue, C.3    Chen, Y.4    Qu, L.5    Lu, W.6
  • 22
    • 77954040575 scopus 로고    scopus 로고
    • Genome-scale metabolic reconstruction and in silico analysis of methylotrophic yeast Pichia pastoris for strain improvement
    • Chung B.K., Selvarasu S., Andrea C., Ryu J., Lee H., Ahn J., Lee H., Lee D.Y. Genome-scale metabolic reconstruction and in silico analysis of methylotrophic yeast Pichia pastoris for strain improvement. Microb. Cell Fact. 2010, 9:50.
    • (2010) Microb. Cell Fact. , vol.9 , pp. 50
    • Chung, B.K.1    Selvarasu, S.2    Andrea, C.3    Ryu, J.4    Lee, H.5    Ahn, J.6    Lee, H.7    Lee, D.Y.8
  • 23
    • 0000243564 scopus 로고    scopus 로고
    • Enzymatic determination of methanol with alcohol oxidase peroxidase, and the chromogen 2,2'-azinobis (3-ethylbenzthiazoline-6-sulfonic acid) and its application to the determination of the methyl ester content of pectins
    • Mangos T.J., Haas M.J. Enzymatic determination of methanol with alcohol oxidase peroxidase, and the chromogen 2,2'-azinobis (3-ethylbenzthiazoline-6-sulfonic acid) and its application to the determination of the methyl ester content of pectins. J. Agric. Food Chem. 1996, 44:2977-2981.
    • (1996) J. Agric. Food Chem. , vol.44 , pp. 2977-2981
    • Mangos, T.J.1    Haas, M.J.2
  • 24
    • 0025608262 scopus 로고
    • The proton extrusion of growing yeast cultures as an on line parameter in fermentation processes: ammonia assimilation and proton extrusion are correlated by an 1:1 stoichiometry in nitrogen limited fed batch fermentations
    • Huth J., Werner S., Müller H.G. The proton extrusion of growing yeast cultures as an on line parameter in fermentation processes: ammonia assimilation and proton extrusion are correlated by an 1:1 stoichiometry in nitrogen limited fed batch fermentations. J. Basic Microbiol. 1990, 30:561-567.
    • (1990) J. Basic Microbiol. , vol.30 , pp. 561-567
    • Huth, J.1    Werner, S.2    Müller, H.G.3
  • 26
    • 34347258175 scopus 로고    scopus 로고
    • Quantitative prediction of cellular metabolism with constraint-based models: the COBRA toolbox
    • Becker S.A., Feist A.M., Mo M.L., Hannum G., Palsson B.O., Herrgard M.J. Quantitative prediction of cellular metabolism with constraint-based models: the COBRA toolbox. Nat. Protoc. 2007, 2:727-738.
    • (2007) Nat. Protoc. , vol.2 , pp. 727-738
    • Becker, S.A.1    Feist, A.M.2    Mo, M.L.3    Hannum, G.4    Palsson, B.O.5    Herrgard, M.J.6
  • 28
    • 35348887734 scopus 로고    scopus 로고
    • Metabolic flux analysis for optimizing the specific growth rate of recombinant Aspergillus niger
    • Gheshlaghi R., Scharer J., Moo-Young M., Douglas P. Metabolic flux analysis for optimizing the specific growth rate of recombinant Aspergillus niger. Bioprocess Biosyst. Eng. 2007, 30:397-418.
    • (2007) Bioprocess Biosyst. Eng. , vol.30 , pp. 397-418
    • Gheshlaghi, R.1    Scharer, J.2    Moo-Young, M.3    Douglas, P.4
  • 30
    • 13844320187 scopus 로고    scopus 로고
    • Microbubble fermentation of recombinant Pichia pastoris for human serum albumin production
    • Zhang W., Li Z.J., Agblevor F.A. Microbubble fermentation of recombinant Pichia pastoris for human serum albumin production. Process Biochem. 2005, 40:2073-2078.
    • (2005) Process Biochem. , vol.40 , pp. 2073-2078
    • Zhang, W.1    Li, Z.J.2    Agblevor, F.A.3
  • 33
    • 42549132542 scopus 로고    scopus 로고
    • Hypoxic fed-batch cultivation of Pichia pastoris increases specific and volumetric productivity of recombinant proteins
    • Baumann K., Maurer M., Dragosits M., Cos O., Ferrer P., Mattanovich D. Hypoxic fed-batch cultivation of Pichia pastoris increases specific and volumetric productivity of recombinant proteins. Biotechnol. Bioeng. 2008, 100:177-183.
    • (2008) Biotechnol. Bioeng. , vol.100 , pp. 177-183
    • Baumann, K.1    Maurer, M.2    Dragosits, M.3    Cos, O.4    Ferrer, P.5    Mattanovich, D.6
  • 34
    • 74049130331 scopus 로고    scopus 로고
    • Macromolecular and elemental composition analysis and extracellular metabolic balances of Pichia pastoris growing at different oxygen levels
    • Carnicer M., Baumann K., Toplitz I., Sanchez-Ferrando F., Mattanovich D., Ferrer P., Albiol J. Macromolecular and elemental composition analysis and extracellular metabolic balances of Pichia pastoris growing at different oxygen levels. Mirob. Cell Fact. 2009, 8:65.
    • (2009) Mirob. Cell Fact. , vol.8 , pp. 65
    • Carnicer, M.1    Baumann, K.2    Toplitz, I.3    Sanchez-Ferrando, F.4    Mattanovich, D.5    Ferrer, P.6    Albiol, J.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.